BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00058211
         (534 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1]           333   e-103
gb|AKN59247.1| polyprotein [Lychnis mottle virus]                     322   7e-99
gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2]           321   1e-98
ref|YP_227369.1| protease cofactor [Strawberry latent ringspot v...   289   3e-91
ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot...   289   1e-87

>gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1]
          Length = 2205

 Score =  333 bits (853), Expect = e-103
 Identities = 167/176 (94%), Positives = 174/176 (98%)
 Frame = +3

Query: 3   RKSGTLQASGWNFLRYFSKQATLGFLDGVVAKLRELLGPVINAAGYVWDLIIKAKDYAFS 182
           +KSGTLQASGWN LRYFSKQATLGFLDGV+AKLRELLGPVINAAGYVWDLIIKAKDYAF+
Sbjct: 472 QKSGTLQASGWNPLRYFSKQATLGFLDGVIAKLRELLGPVINAAGYVWDLIIKAKDYAFA 531

Query: 183 MLDEMISRRGEILKALLQPLLYVGGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 362
           MLDEMIS+RGEILKALLQPLLYVGGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY
Sbjct: 532 MLDEMISKRGEILKALLQPLLYVGGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 591

Query: 363 ILVQFLGQAHMGALKRSTKIWELVQKWDQPSEVKRIDKEIIEILVEESPEKEEWLR 530
           ILVQFLGQAHMGALKRSTKIWELVQKWDQPSEV+RID+EI+EILVEESPEKEEW R
Sbjct: 592 ILVQFLGQAHMGALKRSTKIWELVQKWDQPSEVRRIDEEIVEILVEESPEKEEWFR 647


>gb|AKN59247.1| polyprotein [Lychnis mottle virus]
          Length = 2260

 Score =  322 bits (824), Expect = 7e-99
 Identities = 160/176 (90%), Positives = 171/176 (97%)
 Frame = +3

Query: 3    RKSGTLQASGWNFLRYFSKQATLGFLDGVVAKLRELLGPVINAAGYVWDLIIKAKDYAFS 182
            +KSG LQASGWN LRYF++Q TLGFLDGVVAKLRELLGPV+NAAGYVWDL+IKAKDYAFS
Sbjct: 527  QKSGLLQASGWNPLRYFARQTTLGFLDGVVAKLRELLGPVVNAAGYVWDLVIKAKDYAFS 586

Query: 183  MLDEMISRRGEILKALLQPLLYVGGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 362
            MLDEMIS+RGEIL+ALLQPLLYV GFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY
Sbjct: 587  MLDEMISKRGEILRALLQPLLYVSGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 646

Query: 363  ILVQFLGQAHMGALKRSTKIWELVQKWDQPSEVKRIDKEIIEILVEESPEKEEWLR 530
            ILVQFLGQAHMGALKRSTKIWELVQKWD+PSEVK ID+EII++LVEESPEKEEWLR
Sbjct: 647  ILVQFLGQAHMGALKRSTKIWELVQKWDKPSEVKHIDEEIIDLLVEESPEKEEWLR 702


>gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2]
          Length = 2209

 Score =  321 bits (822), Expect = 1e-98
 Identities = 162/176 (92%), Positives = 170/176 (96%)
 Frame = +3

Query: 3    RKSGTLQASGWNFLRYFSKQATLGFLDGVVAKLRELLGPVINAAGYVWDLIIKAKDYAFS 182
            ++SG LQASGWN LRYFSKQATLGFLDGVVAKLRELLGPVINAAGYVWDL+IKAKDYAFS
Sbjct: 476  QRSGLLQASGWNPLRYFSKQATLGFLDGVVAKLRELLGPVINAAGYVWDLVIKAKDYAFS 535

Query: 183  MLDEMISRRGEILKALLQPLLYVGGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 362
            MLDEMIS+RGEIL+ALLQPLLYV GFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY
Sbjct: 536  MLDEMISKRGEILRALLQPLLYVSGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 595

Query: 363  ILVQFLGQAHMGALKRSTKIWELVQKWDQPSEVKRIDKEIIEILVEESPEKEEWLR 530
            ILVQFLG AHMGALKRSTKIWELVQKWD+PSEVK ID EII+IL+EESPEKEEWLR
Sbjct: 596  ILVQFLGHAHMGALKRSTKIWELVQKWDKPSEVKCIDGEIIDILIEESPEKEEWLR 651


>ref|YP_227369.1| protease cofactor [Strawberry latent ringspot virus]
          Length = 719

 Score =  289 bits (740), Expect = 3e-91
 Identities = 139/176 (78%), Positives = 161/176 (91%)
 Frame = +3

Query: 3    RKSGTLQASGWNFLRYFSKQATLGFLDGVVAKLRELLGPVINAAGYVWDLIIKAKDYAFS 182
            RKSG LQASGWN LRYFSKQATLGFLDGV+ KL+EL+GP+INAA +VWDLIIKAKD+AF 
Sbjct: 493  RKSGVLQASGWNPLRYFSKQATLGFLDGVMTKLKELIGPIINAASFVWDLIIKAKDWAFK 552

Query: 183  MLDEMISRRGEILKALLQPLLYVGGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 362
             L++MI +RGEILKALLQPLLYV G L+FLGSLKGL+TIVE  G+PLA+LT AAIG+GVY
Sbjct: 553  ALEDMIEKRGEILKALLQPLLYVCGLLLFLGSLKGLKTIVESFGIPLAILTGAAIGLGVY 612

Query: 363  ILVQFLGQAHMGALKRSTKIWELVQKWDQPSEVKRIDKEIIEILVEESPEKEEWLR 530
            +LV FLGQAHMGALKRSTKIW+LVQ WD+PSEVK ID++IIE+LVEESP+KEEW+R
Sbjct: 613  VLVTFLGQAHMGALKRSTKIWDLVQNWDKPSEVKCIDEQIIEVLVEESPDKEEWVR 668


>ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot virus]
            gi|58040997|gb|AAW63128.1| 250 kDa polyprotein
            [Strawberry latent ringspot virus]
          Length = 2227

 Score =  289 bits (740), Expect = 1e-87
 Identities = 139/176 (78%), Positives = 161/176 (91%)
 Frame = +3

Query: 3    RKSGTLQASGWNFLRYFSKQATLGFLDGVVAKLRELLGPVINAAGYVWDLIIKAKDYAFS 182
            RKSG LQASGWN LRYFSKQATLGFLDGV+ KL+EL+GP+INAA +VWDLIIKAKD+AF 
Sbjct: 493  RKSGVLQASGWNPLRYFSKQATLGFLDGVMTKLKELIGPIINAASFVWDLIIKAKDWAFK 552

Query: 183  MLDEMISRRGEILKALLQPLLYVGGFLIFLGSLKGLQTIVEKLGVPLAVLTAAAIGIGVY 362
             L++MI +RGEILKALLQPLLYV G L+FLGSLKGL+TIVE  G+PLA+LT AAIG+GVY
Sbjct: 553  ALEDMIEKRGEILKALLQPLLYVCGLLLFLGSLKGLKTIVESFGIPLAILTGAAIGLGVY 612

Query: 363  ILVQFLGQAHMGALKRSTKIWELVQKWDQPSEVKRIDKEIIEILVEESPEKEEWLR 530
            +LV FLGQAHMGALKRSTKIW+LVQ WD+PSEVK ID++IIE+LVEESP+KEEW+R
Sbjct: 613  VLVTFLGQAHMGALKRSTKIWDLVQNWDKPSEVKCIDEQIIEVLVEESPDKEEWVR 668