BLASTX nr result
ID: Rehmannia27_contig00057633
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00057633
(587 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP68195.1| Copia protein [Cajanus cajan] 94 1e-21
gb|KYP71882.1| Copia protein [Cajanus cajan] 98 1e-21
dbj|BAT79956.1| hypothetical protein VIGAN_02290700 [Vigna angul... 91 1e-20
gb|KYP45297.1| Copia protein [Cajanus cajan] 89 6e-20
gb|KYP42770.1| Copia protein, partial [Cajanus cajan] 90 2e-19
ref|XP_008245593.1| PREDICTED: uncharacterized protein LOC103343... 93 2e-19
gb|KYP73980.1| Copia protein [Cajanus cajan] 88 2e-19
gb|KHN44566.1| Copia protein, partial [Glycine soja] 91 2e-19
gb|KHN31995.1| Copia protein, partial [Glycine soja] 91 3e-19
gb|KHN43703.1| Copia protein, partial [Glycine soja] 91 4e-19
gb|KYP64840.1| Copia protein [Cajanus cajan] 87 4e-19
gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 87 5e-19
dbj|BAT84750.1| hypothetical protein VIGAN_04219800, partial [Vi... 87 6e-19
dbj|BAU01641.1| hypothetical protein VIGAN_11091400, partial [Vi... 86 7e-19
gb|KYP45565.1| Retrovirus-related Pol polyprotein from transposo... 94 7e-19
gb|KYP36913.1| Copia protein [Cajanus cajan] 87 7e-19
gb|KYP42298.1| Copia protein, partial [Cajanus cajan] 86 7e-19
gb|KYP53210.1| Retrovirus-related Pol polyprotein from transposo... 90 1e-18
gb|KHN36345.1| Retrovirus-related Pol polyprotein from transposo... 86 1e-18
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 93 1e-18
>gb|KYP68195.1| Copia protein [Cajanus cajan]
Length = 97
Score = 93.6 bits (231), Expect = 1e-21
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L I PSP LFCDN++A+HIA NP FHERTKHIEL H VR K+ G+I+LLP+ Q
Sbjct: 8 LQIIEPSPVSLFCDNRSAIHIARNPSFHERTKHIELDCHIVREKLNQGLIHLLPVPSAQQ 67
Query: 366 LADVFTKPLPSVP 404
LAD++TKPL P
Sbjct: 68 LADIYTKPLTLAP 80
>gb|KYP71882.1| Copia protein [Cajanus cajan]
Length = 279
Score = 98.2 bits (243), Expect = 1e-21
Identities = 51/93 (54%), Positives = 64/93 (68%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L + P LFCDNQ+A+HIA+NP+FHERTKHIE+ H +R KV GI++LLP+R HQ
Sbjct: 190 LKLQHYKPISLFCDNQSALHIAANPVFHERTKHIEIDCHSIREKVQAGIVHLLPVRSAHQ 249
Query: 366 LADVFTKPLPSVPPIFYFSCSPRCPCLTFTVHL 464
LADVFTKPL S P F+ + S C +HL
Sbjct: 250 LADVFTKPLASGP--FHLNISKLGMC---NIHL 277
>dbj|BAT79956.1| hypothetical protein VIGAN_02290700 [Vigna angularis var.
angularis]
Length = 101
Score = 90.9 bits (224), Expect = 1e-20
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L + P P+ ++CDN +A+ IA+N +FHERTKHIE+ H +R KV GI+ LLPI T Q
Sbjct: 4 LHLPLPQPATIYCDNMSAIKIATNQVFHERTKHIEIDCHLIREKVQQGIVKLLPIHTTLQ 63
Query: 366 LADVFTKPLPSVPPIFYFSCSPRCPCLTFTVHLEG 470
LAD+ TKPL PP + S + + L LEG
Sbjct: 64 LADILTKPL---PPSTFHSINSKLGTLNIYAKLEG 95
>gb|KYP45297.1| Copia protein [Cajanus cajan]
Length = 93
Score = 89.0 bits (219), Expect = 6e-20
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +3
Query: 189 SISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQL 368
+I+TP S+ +CDN+AA+HIASNP FHERTK++E+ HF+R KV GII L+ +R HQL
Sbjct: 6 NINTPFASV-YCDNKAAIHIASNPTFHERTKYLEIDLHFIRDKVTKGIIKLIHVRKYHQL 64
Query: 369 ADVFTKPLP 395
DVFTK LP
Sbjct: 65 VDVFTKALP 73
>gb|KYP42770.1| Copia protein, partial [Cajanus cajan]
Length = 166
Score = 90.1 bits (222), Expect = 2e-19
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = +3
Query: 189 SISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQL 368
S+ +P+LL+CDNQ+A HIASN +FHERTKHIE+ H VR K+ G+ +LLPI +HQL
Sbjct: 63 SVPFTTPALLYCDNQSARHIASNAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQL 122
Query: 369 ADVFTKPLPSVP 404
AD+ TKPL P
Sbjct: 123 ADILTKPLDPSP 134
>ref|XP_008245593.1| PREDICTED: uncharacterized protein LOC103343731 [Prunus mume]
Length = 305
Score = 92.8 bits (229), Expect = 2e-19
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L+I SPS LFCDN+AA+HIA+NP+FHERT+HIE+ HF+R K+VDG I + HQ
Sbjct: 216 LNIPLTSPSDLFCDNEAALHIAANPVFHERTRHIEMDCHFIRDKIVDGTITTKYVGTAHQ 275
Query: 366 LADVFTKPL 392
LAD+FTKPL
Sbjct: 276 LADLFTKPL 284
>gb|KYP73980.1| Copia protein [Cajanus cajan]
Length = 106
Score = 87.8 bits (216), Expect = 2e-19
Identities = 45/82 (54%), Positives = 57/82 (69%)
Frame = +3
Query: 183 VLSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTH 362
V I SPS+L+CDNQ+A+ IASNP+FHERTKHIE+ H V KV G++ LLP+ +
Sbjct: 12 VRHIDPISPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVCDKVSTGLLKLLPVSSSM 71
Query: 363 QLADVFTKPLPSVPPIFYFSCS 428
QLAD+ TKPL P +F CS
Sbjct: 72 QLADILTKPLS--PFVFRSHCS 91
>gb|KHN44566.1| Copia protein, partial [Glycine soja]
Length = 218
Score = 90.9 bits (224), Expect = 2e-19
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L ++ P+ L+CDNQ+A+ IA+NP+FHERTKHIE+ H VR KV G I LLP+ + Q
Sbjct: 132 LRVTFVQPATLYCDNQSAIQIATNPVFHERTKHIEIDCHLVRNKVTSGFIKLLPVSSSLQ 191
Query: 366 LADVFTKPLPSVPPIFYFSCS 428
LAD+FTKPL P +F C+
Sbjct: 192 LADIFTKPL--TPVVFQHLCN 210
>gb|KHN31995.1| Copia protein, partial [Glycine soja]
Length = 224
Score = 90.9 bits (224), Expect = 3e-19
Identities = 44/76 (57%), Positives = 55/76 (72%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L I+ L+CDNQ+A+HIA+NPMFHERTKH+E+ HFVR K+ +G++ LLPI Q
Sbjct: 132 LHITCTRAPALYCDNQSALHIAANPMFHERTKHLEIDCHFVRNKIQEGVLRLLPISSKEQ 191
Query: 366 LADVFTKPLPSVPPIF 413
LAD FTK LP PP F
Sbjct: 192 LADFFTKVLP--PPSF 205
>gb|KHN43703.1| Copia protein, partial [Glycine soja]
Length = 218
Score = 90.5 bits (223), Expect = 4e-19
Identities = 45/79 (56%), Positives = 56/79 (70%)
Frame = +3
Query: 192 ISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQLA 371
+S P L+CDNQ+A+ IASNP+FHERTKHIE+ H VR KV GI+ LLP+ + QLA
Sbjct: 134 VSFIQPVTLYCDNQSAIQIASNPVFHERTKHIEIDCHIVRDKVNSGILKLLPVSSSMQLA 193
Query: 372 DVFTKPLPSVPPIFYFSCS 428
D+FTKPL P +F CS
Sbjct: 194 DIFTKPLS--PALFQGLCS 210
>gb|KYP64840.1| Copia protein [Cajanus cajan]
Length = 111
Score = 87.4 bits (215), Expect = 4e-19
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = +3
Query: 192 ISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQLA 371
+S PS L+CDN++A+HIA+N +FHERTKHIE+ H VR K + G+I LLPI +QLA
Sbjct: 20 VSFIQPSTLYCDNRSALHIAANSVFHERTKHIEIDCHIVREKALQGLIKLLPISSANQLA 79
Query: 372 DVFTKPLPSVPPIFYF 419
D++TKPL P F F
Sbjct: 80 DIYTKPLS--PGAFQF 93
>gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-type;
Retrotransposon gag protein, putative [Medicago
truncatula]
Length = 120
Score = 87.4 bits (215), Expect = 5e-19
Identities = 44/87 (50%), Positives = 58/87 (66%)
Frame = +3
Query: 132 LCSFSTQLESTSYCNKLVLSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVR 311
L + S++L+ Y L I P P ++CD+QAA+HIA NP+FHERTKHIE+ HFVR
Sbjct: 29 LATLSSELQWLKYLLS-DLGIYHPQPITIYCDSQAAIHIAENPVFHERTKHIEIDCHFVR 87
Query: 312 VKVVDGIINLLPIRFTHQLADVFTKPL 392
K+ +I IR + QLAD+FTKPL
Sbjct: 88 EKIKSSLITASYIRSSDQLADIFTKPL 114
>dbj|BAT84750.1| hypothetical protein VIGAN_04219800, partial [Vigna angularis var.
angularis]
Length = 99
Score = 86.7 bits (213), Expect = 6e-19
Identities = 45/95 (47%), Positives = 59/95 (62%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L IS P+P ++CDN +A+HIA NP FHERTKHI++ H R K+ DG+I LL + T Q
Sbjct: 7 LHISCPTPYSVYCDNNSAIHIAKNPTFHERTKHIDIDCHVTRQKLQDGLIKLLHVSSTSQ 66
Query: 366 LADVFTKPLPSVPPIFYFSCSPRCPCLTFTVHLEG 470
+ADVFTK L P + + + VHLEG
Sbjct: 67 VADVFTKSLYPSP---FNMVTSKLNMHNIHVHLEG 98
>dbj|BAU01641.1| hypothetical protein VIGAN_11091400, partial [Vigna angularis var.
angularis]
Length = 92
Score = 86.3 bits (212), Expect = 7e-19
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +3
Query: 186 LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQ 365
L + P++LFCDN++A+HIA+NP+FHERTKHIE+ H VR K+ G++ LLPI Q
Sbjct: 3 LHVPFQQPAVLFCDNKSALHIAANPVFHERTKHIEIDCHIVREKLSSGLLKLLPIPSACQ 62
Query: 366 LADVFTKPLPSVPPIFYFSCS 428
L D++TK LP P F F S
Sbjct: 63 LTDIYTKGLP--PAAFKFLVS 81
>gb|KYP45565.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 818
Score = 93.6 bits (231), Expect = 7e-19
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = +3
Query: 138 SFSTQLESTSYCNKLVLSISTPSP-SLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRV 314
+ S+ ++ N ++ + +P +L++CDN+AA+HIASNP FHERTKH+E+ HF+R
Sbjct: 712 ALSSVSSEITWLNNMLTEFNINTPFALVYCDNRAAIHIASNPTFHERTKHLEIDLHFIRD 771
Query: 315 KVVDGIINLLPIRFTHQLADVFTKPLP 395
KV G+I L+ +R HQLADVFTK LP
Sbjct: 772 KVTKGVIKLIHVRKYHQLADVFTKALP 798
>gb|KYP36913.1| Copia protein [Cajanus cajan]
Length = 107
Score = 86.7 bits (213), Expect = 7e-19
Identities = 47/88 (53%), Positives = 59/88 (67%)
Frame = +3
Query: 207 PSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQLADVFTK 386
P+LL+CDNQ+A+ IASN +FHERTKHI++ H VR KV G+I LLPI T QLAD++TK
Sbjct: 21 PALLYCDNQSALRIASNQVFHERTKHIDIDCHIVRDKVQAGVIKLLPISSTSQLADIYTK 80
Query: 387 PLPSVPPIFYFSCSPRCPCLTFTVHLEG 470
L P +F CS + L LEG
Sbjct: 81 ALS--PAVFQGFCS-KLGMLNIHSQLEG 105
>gb|KYP42298.1| Copia protein, partial [Cajanus cajan]
Length = 82
Score = 85.9 bits (211), Expect = 7e-19
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +3
Query: 222 CDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQLADVFTKPLPSV 401
CDNQ+A+HIA+NPMFHERTKHIEL H VR K+ G++ LLPI +QLAD++TK LP
Sbjct: 1 CDNQSALHIAANPMFHERTKHIELDCHLVREKLHSGLLKLLPITSANQLADIYTKALP-- 58
Query: 402 PPIFYFSCSPRCPCLTFTVH--LEG 470
P F F +C + +H LEG
Sbjct: 59 PGAFNFL---QCKLGMYNIHSQLEG 80
>gb|KYP53210.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 239
Score = 89.7 bits (221), Expect = 1e-18
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +3
Query: 141 FSTQLESTSYCNKLV-LSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVK 317
+S E T N L +I+TP S+ +CDN+ +HIASNP FHERTKH+E+ HF+R K
Sbjct: 148 YSVSNEITWLRNLLADFNINTPFASV-YCDNKVVIHIASNPTFHERTKHLEIDLHFIRDK 206
Query: 318 VVDGIINLLPIRFTHQLADVFTKPLP 395
V G+I L+ +R HQLADVFTK LP
Sbjct: 207 VTKGVIKLIHVRKYHQLADVFTKSLP 232
>gb|KHN36345.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 100
Score = 85.9 bits (211), Expect = 1e-18
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +3
Query: 210 SLLFCDNQAAVHIASNPMFHERTKHIELYFHFVRVKVVDGIINLLPIRFTHQLADVFTKP 389
+L+FCDN++A+HI +NP+FHERTKHIE+ H V K+V G+I LLPI QLADV+TK
Sbjct: 20 ALVFCDNKSALHIVANPVFHERTKHIEIDCHLVHDKLVSGLIKLLPIASAQQLADVYTKA 79
Query: 390 LPSVPPIFYFSCS 428
L +F+F CS
Sbjct: 80 L--ALGVFHFICS 90
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 92.8 bits (229), Expect = 1e-18
Identities = 54/113 (47%), Positives = 71/113 (62%)
Frame = +3
Query: 132 LCSFSTQLESTSYCNKLVLSISTPSPSLLFCDNQAAVHIASNPMFHERTKHIELYFHFVR 311
L + + +L+ SY K I SPS+L+CDNQ+A+ IASNP+FHERTKHIE+ H VR
Sbjct: 1206 LATTTCELQWLSYLLK-DFHIDPISPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVR 1264
Query: 312 VKVVDGIINLLPIRFTHQLADVFTKPLPSVPPIFYFSCSPRCPCLTFTVHLEG 470
KV G++ LLP+ + QLAD+ TKPL P +F CS + L LEG
Sbjct: 1265 DKVSTGLLKLLPVSSSQQLADILTKPLS--PFVFRSHCS-KLGMLNIHSQLEG 1314