BLASTX nr result

ID: Rehmannia27_contig00056799 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00056799
         (501 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIG89821.1| hypothetical protein (mitochondrion) [Capsicum an...   110   1e-28
gb|EEF24232.1| conserved hypothetical protein [Ricinus communis]...    55   5e-15
gb|KCW73152.1| hypothetical protein EUGRSUZ_E01604 [Eucalyptus g...    56   2e-07

>gb|AIG89821.1| hypothetical protein (mitochondrion) [Capsicum annuum]
          Length = 119

 Score =  110 bits (276), Expect = 1e-28
 Identities = 63/98 (64%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
 Frame = -2

Query: 500 TGRGMLSKPNETRKNMGISTIHMSAFV--SKRQQTKGKPSLYLGFGLASYIDLEKIWIGC 327
           TGRG LSKPNETRKNMGISTIHMSAFV   +  +TKG+PSLYLG GLASYI LE I++  
Sbjct: 22  TGRGRLSKPNETRKNMGISTIHMSAFVLSLRDNKTKGQPSLYLGLGLASYIALESIFLVV 81

Query: 326 SVDXXXXXXXXXXXXGFCRRLIEAEAGATRAICIESFD 213
                          G CRRLIEAEAGAT AIC+E FD
Sbjct: 82  VRMLEQLLYAVGVEGGGCRRLIEAEAGATGAICVECFD 119


>gb|EEF24232.1| conserved hypothetical protein [Ricinus communis]
           gi|223524644|gb|EEF27638.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 55.5 bits (132), Expect(2) = 5e-15
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 391 GFPFVCCLFETKALI*MVLIPMFFLVSFGFESIPLPV 501
           G P +C LFE KALI MVLIPMFFLVSFGFES+PL V
Sbjct: 53  GLP-LCWLFEAKALIGMVLIPMFFLVSFGFESLPLHV 88



 Score = 52.4 bits (124), Expect(2) = 5e-15
 Identities = 24/30 (80%), Positives = 27/30 (90%), Gaps = 1/30 (3%)
 Frame = +2

Query: 317 NPHYNQSKFSPDRY-MMLNRNRDRERASPL 403
           NPHYNQS+FSPDRY MMLNR++DRER  PL
Sbjct: 27  NPHYNQSQFSPDRYMMMLNRDQDRERGLPL 56


>gb|KCW73152.1| hypothetical protein EUGRSUZ_E01604 [Eucalyptus grandis]
          Length = 103

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 30/53 (56%), Positives = 36/53 (67%)
 Frame = +1

Query: 343 FSRSIYDAKPKPR*REGFPFVCCLFETKALI*MVLIPMFFLVSFGFESIPLPV 501
           +S   Y    + R RE    +C LFETKAL+ M+LIPM FLVSF FES+PLPV
Sbjct: 15  YSPDRYMMLNRDRDRERGMTLCWLFETKALVGMMLIPMLFLVSFAFESLPLPV 67


Top