BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00055672
         (828 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP62388.1| Retrovirus-related Pol polyprotein from transposo...    61   7e-09
emb|CAN75792.1| hypothetical protein VITISV_041034 [Vitis vinifera]    58   5e-08
emb|CAN74329.1| hypothetical protein VITISV_018993 [Vitis vinifera]    56   2e-07
emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]    58   4e-07
gb|KYP54935.1| Retrovirus-related Pol polyprotein from transposo...    59   2e-06
gb|KYP67995.1| hypothetical protein KK1_021612 [Cajanus cajan]         58   3e-06
emb|CAN75666.1| hypothetical protein VITISV_016771 [Vitis vinifera]    50   4e-06
emb|CAN77322.1| hypothetical protein VITISV_002172 [Vitis vinifera]    58   4e-06

>gb|KYP62388.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1362

 Score = 61.2 bits (147), Expect(2) = 7e-09
 Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = -2

Query: 359  TKSTIGYRTE-YGNVVTWRSKKLKIFAGKVVQKLKTELLPKGFLSRLLKKXXXXXXXXXX 183
            +KST GY T+ +GN+VTWRSKK  + A    +  +   + +G    +  K          
Sbjct: 1219 SKSTTGYCTKVWGNLVTWRSKKQSVVARSSAEA-EYRAIAQGVCELIWIKRLLH------ 1271

Query: 182  XXXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKHAWIGRN 45
                  +L + +Q    L++D+KS I+I+H+P+QHDRMKH  I RN
Sbjct: 1272 ------DLFIPLQEPVKLYSDSKSAINIVHNPVQHDRMKHVRIDRN 1311



 Score = 26.9 bits (58), Expect(2) = 7e-09
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -3

Query: 493  VTQILWH*KGKLGKRLVFKKNAIHEECRRDVEGFSDLD 380
            V QIL + K   GK L+F+KN       R VE F+D D
Sbjct: 1179 VNQILRYLKSTPGKGLLFRKNE-----HRSVECFADAD 1211


>emb|CAN75792.1| hypothetical protein VITISV_041034 [Vitis vinifera]
          Length = 531

 Score = 58.2 bits (139), Expect(2) = 5e-08
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
 Frame = -2

Query: 356 KSTIGYRTEYG-NVVTWRSKKLKIFAGKVVQKLKTELLPKGFLSRLLKKXXXXXXXXXXX 180
           KST GY T  G N+VTWRSKK K+ A     K K   + KG    L  +           
Sbjct: 429 KSTSGYFTFVGGNLVTWRSKKQKVVALSSA-KSKFRGMAKGLCELLWLRRLLT------- 480

Query: 179 XXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKHAWIGRN 45
                E+G    C  NL  DNK+TI + H+P+Q+DR KH  + R+
Sbjct: 481 -----EIGFPPNCEMNLLCDNKATIDVAHNPVQYDRTKHVKVDRH 520



 Score = 27.3 bits (59), Expect(2) = 5e-08
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 493 VTQILWH*KGKLGKRLVFKKNAIHEECRR 407
           VTQIL + KG +GK ++F KN  H E  R
Sbjct: 388 VTQILRYLKGTIGKGIMFSKNG-HLEITR 415


>emb|CAN74329.1| hypothetical protein VITISV_018993 [Vitis vinifera]
          Length = 542

 Score = 55.8 bits (133), Expect(2) = 2e-07
 Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
 Frame = -2

Query: 356 KSTIGYRTEY-GNVVTWRSKKLKIFAGKVVQKLKTEL--LPKGFLSRL-LKKXXXXXXXX 189
           KST GY T   GN+VTWRSKK K+ A   +   + E   + KG    + LKK        
Sbjct: 400 KSTSGYFTLVRGNLVTWRSKKQKVVA---LSSTEAEFRGMVKGICELIWLKKLLT----- 451

Query: 188 XXXXXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKHAWIGRN 45
                   E+GV      NL  DNK+ I+I H+P+QHD  KH  + RN
Sbjct: 452 --------EIGVAPSSEMNLLCDNKAIIAISHNPVQHDHTKHVEVDRN 491



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 493 VTQILWH*KGKLGKRLVFKKNAIHEECRRDVEGFSDLD 380
           V +IL + K   GKRL+F KNA       +V G++D D
Sbjct: 359 VMRILRYLKSSSGKRLMFSKNA-----HLNVAGYTDAD 391


>emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]
          Length = 1041

 Score = 58.2 bits (139), Expect(2) = 4e-07
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = -2

Query: 356  KSTIGYRTEYG-NVVTWRSKKLKIFAGKVVQKLKTELLPKGFLSRL-LKKXXXXXXXXXX 183
            KST GY T  G N+VTWRSKK K+ A    +  + + + KG    L LKK          
Sbjct: 899  KSTSGYFTFVGGNLVTWRSKKQKVVALSSAEA-EFQGMVKGICELLWLKKLLA------- 950

Query: 182  XXXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKHAWIGRN 45
                  E+GV      NL  DNK+ I+I H+P+QHDR KH  +  N
Sbjct: 951  ------EIGVAPNSEMNLFCDNKAAIAIFHNPVQHDRTKHVEVDLN 990



 Score = 24.3 bits (51), Expect(2) = 4e-07
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 493 VTQILWH*KGKLGKRLVFKKNAIHEECRRDVEGFSDLD 380
           V QIL + K   GK+L+F KN+       +V G+ D D
Sbjct: 858 VDQILRYLKSSPGKKLMFLKNS-----HLNVAGYIDAD 890


>gb|KYP54935.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 546

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
 Frame = -2

Query: 359 TKSTIGYRTE-YGNVVTWRSKKLKIFAGKVVQKLKTELLPKGF-----LSRLLKKXXXXX 198
           +KST GY T+ +GN+VTWRSKK  + A    + ++   +  G      + RLL       
Sbjct: 419 SKSTRGYYTKVWGNLVTWRSKKQSVIARSSAE-VECRAIAHGVCELTSIKRLLH------ 471

Query: 197 XXXXXXXXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKHAWIGRN 45
                      +L + +Q    L+ D+KS I+I+H+P+QHD+MKH  I RN
Sbjct: 472 -----------DLFIPLQGPVKLYGDSKSAINIVHNPVQHDKMKHVRIDRN 511


>gb|KYP67995.1| hypothetical protein KK1_021612 [Cajanus cajan]
          Length = 301

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
 Frame = -2

Query: 356 KSTIGYRTEYG-NVVTWRSKKLKIFAGKVVQKLKTELLPKGFLSRLLKKXXXXXXXXXXX 180
           KSTIGY T  G N+VTWRSKK K      V +  TE   +G  + + K            
Sbjct: 205 KSTIGYVTLVGGNLVTWRSKKQK-----KVTRSSTEAKWRGMANGICKLLWLRRLLT--- 256

Query: 179 XXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKHAWIGRN 45
                ELG   +    LH DN+STI +  +PIQH++MKH  + RN
Sbjct: 257 -----ELGYKPKSSMKLHYDNQSTIELSKNPIQHEQMKHVDVDRN 296


>emb|CAN75666.1| hypothetical protein VITISV_016771 [Vitis vinifera]
          Length = 568

 Score = 50.1 bits (118), Expect(2) = 4e-06
 Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = -2

Query: 356 KSTIGYRTEY-GNVVTWRSKKLKIFAGKVVQKLKTELLPKGFLSRLLKKXXXXXXXXXXX 180
           KST GY T   GN+VTWRSKK K+ A   +   + E   +G +  L +            
Sbjct: 445 KSTSGYFTFVRGNLVTWRSKKQKVVA---LSNAEAEF--RGMVKGLCELIWLRSLLI--- 496

Query: 179 XXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKH 63
                E+G     + NL   NK+TI I H+PIQHDR KH
Sbjct: 497 -----EVGFPPSSVMNLLCFNKATIDISHNPIQHDRTKH 530



 Score = 28.9 bits (63), Expect(2) = 4e-06
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -3

Query: 493 VTQILWH*KGKLGKRLVFKKNAIHEECRRDVEGFSDLD*GR 371
           V +ILW+ K   GK L+F KNA       ++E ++D D  R
Sbjct: 404 VIRILWYLKSSPGKGLMFSKNA-----HLNIEWYTDADRAR 439


>emb|CAN77322.1| hypothetical protein VITISV_002172 [Vitis vinifera]
          Length = 776

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
 Frame = -2

Query: 356 KSTIGYRTEYG-NVVTWRSKKLKIFAGKVVQKLKTEL--LPKGFLSRL-LKKXXXXXXXX 189
           KST GY T  G N+VTWRSKK K+ A   +   + E   + KG    + LKK        
Sbjct: 639 KSTAGYFTFVGGNLVTWRSKKQKVVA---LSSAEAEFRGMVKGICELIWLKKLLA----- 690

Query: 188 XXXXXLF*ELGVFIQCLTNLHTDNKSTISIIHDPIQHDRMKHAWIGRN*VYV*QWLN*SD 9
                   E+GV      NL  DN + I+I H+P+QHDR KH  + RN  ++ Q L   D
Sbjct: 691 --------EIGVAPSSEMNLFCDNTAAIAISHNPVQHDRTKHVEVDRN--FIKQNLEEKD 740

Query: 8   Y 6
           Y
Sbjct: 741 Y 741