BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00055466
         (1819 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo...   679   0.0  
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...   679   0.0  
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo...   659   0.0  
gb|KOM46937.1| hypothetical protein LR48_Vigan07g064100 [Vigna a...   648   0.0  
gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposo...   661   0.0  
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   638   0.0  
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo...   653   0.0  
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]   653   0.0  
gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposo...   630   0.0  
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo...   651   0.0  
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo...   636   0.0  
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       622   0.0  
ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794...   637   0.0  
gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposo...   621   0.0  
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo...   639   0.0  
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo...   634   0.0  
gb|AJY78065.1| putative polyprotein [Glycine max]                     602   0.0  
gb|KYP42321.1| Copia protein [Cajanus cajan]                          629   0.0  
ref|XP_009338880.1| PREDICTED: uncharacterized protein LOC103931...   620   0.0  
gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposo...   606   0.0  

>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1316

 Score =  679 bits (1752), Expect = 0.0
 Identities = 339/605 (56%), Positives = 444/605 (73%)
 Frame = +2

Query: 2    SNISETNIPGPSNNSENHMSSPSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYAS 181
            S+I E++ P     S+ H S P     +R+STR R  P YLQ +         +ST ++S
Sbjct: 721  SSIVESSDPP---TSDQHSSPPP----LRRSTRPRRPPTYLQDFHGAFT---STSTAHSS 770

Query: 182  TGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNN 361
            TG ++ + + LS D LS S   ++ +ISS+ EPK +A+ASKS  W +AM  E+ ALE NN
Sbjct: 771  TGIRHPLHSFLSYDLLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEEIFALEANN 830

Query: 362  TWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANI 541
            TW+LT LPP+K  IGC+WVYKVK+K+DGSI+RYK RLVA GYTQ EG+D+FDTFSPVA +
Sbjct: 831  TWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKL 890

Query: 542  TTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYG 721
            TTVRL++++AA + W L QLDVNNAFLHGDLNEEVYM  PPG       +VC+L +SLYG
Sbjct: 891  TTVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYG 950

Query: 722  LKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEIN 901
            LKQASRQW+ +L+S L+ +G+  S SD SLF+K +    T + +YVDDI+LAGN++ EI+
Sbjct: 951  LKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATTTAILIYVDDIVLAGNDLTEIH 1010

Query: 902  NIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPM 1081
            ++   L   F IKDLG LKY LG+E+AR+  GIHLCQRKY LDLL++TG+L  KP STPM
Sbjct: 1011 HLTSLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYILDLLSDTGMLASKPVSTPM 1070

Query: 1082 DSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAH 1261
            D       ++ TPLTD + YRRL+GR++YLT TRP+++Y++  LSQF+S PT AH  A  
Sbjct: 1071 DYSMHLSASSGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQFVSNPTTAHRQALF 1130

Query: 1262 RVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKK 1441
            R+LRY+K  PG GIF S NS + L+ F+D+DWA CPDTRRSI+G+AV+LG+SLISWK+KK
Sbjct: 1131 RILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCPDTRRSITGFAVYLGDSLISWKSKK 1190

Query: 1442 QPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNH 1621
            Q T+SRSS+EAEYRA+A  TCELQWL+YLL+D  I    P+++Y D++SA  I+ N   H
Sbjct: 1191 QITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDPISPSILYCDNQSALQIASNPVFH 1250

Query: 1622 ERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHA 1801
            ERTKHI++DCH VR+K+  GLLKL+ + S+QQ ADI TKPL P +F     KL ML+IH+
Sbjct: 1251 ERTKHIEIDCHIVRDKVSTGLLKLLPVSSSQQLADILTKPLSPFVFRSHCSKLGMLNIHS 1310

Query: 1802 PLEGG 1816
             LEGG
Sbjct: 1311 QLEGG 1315


>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  679 bits (1751), Expect = 0.0
 Identities = 337/586 (57%), Positives = 427/586 (72%)
 Frame = +2

Query: 59   SSPSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYASTGKQYSICNSLSIDQLSHS 238
            S P   + +R+STR R  P+YLQ Y      SL S++     G  Y I   +S  +LS+ 
Sbjct: 792  SLPPNSSPLRRSTRLRNPPSYLQDYH----HSLTSTSTNLHPGMLYPIEKYISYSRLSND 847

Query: 239  HKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILTELPPNKHCIGCKWV 418
             + F+++IS++ EP +YA+A+K   W +AM  EL AL+ N TW LT LPP+K  +GC+W+
Sbjct: 848  FQAFVSSISAVSEPHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWI 907

Query: 419  YKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLIIAVAAAS*WFLHQ 598
            YK+KY +DGSIERYK RLVA GYTQ EG+DY  TFSPVA +TTVRL++A+AA   W L Q
Sbjct: 908  YKIKYNADGSIERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVFDWHLKQ 967

Query: 599  LDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASRQWFQKLTSCLLTY 778
            LDVNNAFLHGDLNEEVYM  P G   E   +VCKL KSLYGLKQASRQWF KL+S L+ +
Sbjct: 968  LDVNNAFLHGDLNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAKLSSFLIHH 1027

Query: 779  GFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHLDDQFTIKDLGTLK 958
            G+ QS SD SLF+K +S   T L +YVDDI+LAGNN+ EI  I   LD  F IKDLG LK
Sbjct: 1028 GYHQSASDHSLFMKFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDVAFKIKDLGNLK 1087

Query: 959  YILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFDPQTAANTPLTDPSQ 1138
            Y LG+E+AR+  GIHL QRKY LD+L++ G++  +P STPMD       ++ TPL DPS 
Sbjct: 1088 YFLGLEVARNKSGIHLSQRKYVLDILSDCGMMASRPVSTPMDYTSRLSASSGTPLADPSS 1147

Query: 1139 YRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRYIKNNPGKGIFYSSN 1318
            YRRL+GR++YLT TRP++SY +H LSQF+S P+ AH  A  R+LRY+K  PG G+F+ +N
Sbjct: 1148 YRRLLGRLIYLTTTRPDISYVVHHLSQFMSAPSTAHSQAIFRILRYLKQAPGSGLFFPTN 1207

Query: 1319 SELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTISRSSAEAEYRAIALI 1498
            S LHLK F+D+DWA C DTRRSI+G++V+LG+SLISW++KKQPT+SRSS+EAEYRA+A  
Sbjct: 1208 SSLHLKAFSDSDWAGCLDTRRSITGFSVYLGDSLISWRSKKQPTVSRSSSEAEYRALATT 1267

Query: 1499 TCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTKHIQLDCHFVREKLQE 1678
            T ELQWLTYLL DL +P  QPAL+Y D++SA  I+ N   HERTKHI +DCH VREKLQ 
Sbjct: 1268 TSELQWLTYLLHDLHVPVHQPALLYCDNQSALHIAANQVFHERTKHIDIDCHLVREKLQS 1327

Query: 1679 GLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAPLEGG 1816
            GLLKL+ + S  Q ADIFTK L P +F     KL ML++++ LEGG
Sbjct: 1328 GLLKLLPVASPHQLADIFTKSLSPSMFTALYSKLGMLNLYSQLEGG 1373


>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  659 bits (1701), Expect = 0.0
 Identities = 336/603 (55%), Positives = 425/603 (70%), Gaps = 6/603 (0%)
 Frame = +2

Query: 26   PGPSNNSENHMSSPSQIT----VMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYASTGKQ 193
            P P + +    SSP  +      +RKSTR R  P+YL  Y   L  +  S T    +   
Sbjct: 401  PTPLSTNTTPTSSPVSVVPPPPFVRKSTRPRKLPSYLHDYHHTLLTTHNSPT---ISQPL 457

Query: 194  YSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWIL 373
            YSI N +S   LS S K F  +ISSI EP +Y +A +   W+ A++TELTALEKNNTWIL
Sbjct: 458  YSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWIL 517

Query: 374  TELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVR 553
            T LPPNK  +GCKWV+K+K+ SDG+IER+K RLVA GYTQ E +DY DTFSPV  +TTVR
Sbjct: 518  TPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTVR 577

Query: 554  LIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKR--VCKLIKSLYGLK 727
             ++AVA A  W +HQLDVN  FLHGDL+EEVYM PPPG      +   VCKL+KSLYGLK
Sbjct: 578  TLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLYGLK 637

Query: 728  QASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNI 907
            QASRQW  KLTS L+  GF+QS +D SLF K      T + VYVDD++LAGN+  EIN I
Sbjct: 638  QASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGNDPTEINYI 697

Query: 908  KQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDS 1087
            K  LD +FTIKDLG LKY LG+E+ARSS GI L QRKYALDL+ +TGLL  KP  +PMD 
Sbjct: 698  KSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIEDTGLLASKPCKSPMDH 757

Query: 1088 KFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRV 1267
                     TPLTDP+QYRRL+GR++YLT TR ++S+S++ LSQF+ +PT  H  AA R+
Sbjct: 758  SVKLHKTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALRI 817

Query: 1268 LRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQP 1447
            L+Y+KN PGKG+F+ S+S+L LKG++D+DWA C DTRRS++G++ FLG +LISWK+KKQ 
Sbjct: 818  LKYVKNAPGKGLFFPSSSDLTLKGYSDSDWASCSDTRRSVTGFSFFLGPALISWKSKKQA 877

Query: 1448 TISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHER 1627
            T+S+SSAEAEYRA+A  TCE QWL+YLL D  +    P +++ D++SA  I+ N   HER
Sbjct: 878  TVSKSSAEAEYRALAQSTCEAQWLSYLLHDFGLHSFHPIVLFCDNQSALHIASNPVFHER 937

Query: 1628 TKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAPL 1807
            TK+I+LDCH VREKLQ GL+ L+ + +A Q AD+FTK L  + F     KL M DIH+ L
Sbjct: 938  TKNIELDCHIVREKLQVGLIHLLPISTADQLADVFTKALSLRPFEQIIFKLGMFDIHSSL 997

Query: 1808 EGG 1816
             GG
Sbjct: 998  RGG 1000


>gb|KOM46937.1| hypothetical protein LR48_Vigan07g064100 [Vigna angularis]
          Length = 763

 Score =  648 bits (1672), Expect = 0.0
 Identities = 328/595 (55%), Positives = 415/595 (69%)
 Frame = +2

Query: 20   NIPGPSNNSENHMSSPSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYASTGKQYS 199
            N    +N  ENH          R+S R R TP YL  Y   +  SL     + +    Y 
Sbjct: 179  NSDSTANGEENHSC--------RRSNRVRRTPEYLNDYVHQVNQSLSMKNNFKTP---YP 227

Query: 200  ICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILTE 379
            I + LS D L+  H  +  TI++  EP++Y +A    EW++AM+ E+ AL+ NNT  LT+
Sbjct: 228  ISDLLSCDSLTEKHLKYTMTITANDEPRSYNEAKGMCEWEEAMQREIKALQDNNTRYLTQ 287

Query: 380  LPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLI 559
            LPP K  IGC+WVYK KY  DG+IERYK RLVA GYTQ+EG+DY DTFSPVA +TTVRL+
Sbjct: 288  LPPGKKPIGCRWVYKTKYNVDGTIERYKARLVAKGYTQQEGIDYLDTFSPVAKLTTVRLL 347

Query: 560  IAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASR 739
            I +AA++ WFLHQLDV NAFL GDLNEEVYM PPPG     + +VC+L KSLYGLKQASR
Sbjct: 348  IVLAASNNWFLHQLDVENAFLRGDLNEEVYMEPPPGLNTHKEGQVCRLTKSLYGLKQASR 407

Query: 740  QWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHL 919
            QWF+KL+S L++  + QS+SD SLFIK  S   T L VYVDDIILAGN+M EINN+K  L
Sbjct: 408  QWFEKLSSFLISVNYIQSKSDHSLFIKGTSTDFTALLVYVDDIILAGNSMTEINNVKTLL 467

Query: 920  DDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFDP 1099
             ++F IK+LG LKY LG+E+ARS KGIHLCQRKYALD+L ETG+LGCKP+STP  S    
Sbjct: 468  HNKFQIKNLGELKYFLGLEVARSKKGIHLCQRKYALDILKETGMLGCKPSSTPFLSDTSS 527

Query: 1100 QTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRYI 1279
                ++ L D   YRRLIG++LYLT TRP+L +SI+ LSQF+  PT  H  A   VLRY 
Sbjct: 528  LYRTDSYLDDLGSYRRLIGKLLYLTNTRPDLCFSINLLSQFMKSPTNHHYRAVQHVLRYT 587

Query: 1280 KNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTISR 1459
            K+ P +G+F+  +S +HLK F+D+DWA CP+TRRS +G+ VFLG+SLISWK+KKQ T+SR
Sbjct: 588  KSKPSEGLFFGDDSPVHLKAFSDSDWATCPNTRRSTTGFCVFLGSSLISWKSKKQSTVSR 647

Query: 1460 SSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTKHI 1639
            SS +AEYRA+A   CE+QW+ YL QDL++   +   +Y D+KSA  I+ N   HERTKHI
Sbjct: 648  SSTKAEYRALAATLCEIQWIHYLQQDLQVQEAETPALYCDNKSARHIAHNQSFHERTKHI 707

Query: 1640 QLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAP 1804
            +LDCH VREK+QE LL+L+ + S +Q ADIFTK      F     KL ++ IH P
Sbjct: 708  ELDCHVVREKIQENLLRLLPVRSNEQLADIFTKFPHRVRFKSIVPKLGLVSIHHP 762


>gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1352

 Score =  661 bits (1706), Expect = 0.0
 Identities = 330/600 (55%), Positives = 435/600 (72%), Gaps = 3/600 (0%)
 Frame = +2

Query: 26   PGPSNNSENHMSSPSQIT---VMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYASTGKQY 196
            P PS++  + +SSP   T   +  + TR+R  P+YL+ Y      +  SS    S G +Y
Sbjct: 756  PSPSSHPPHSLSSPESPTSSPIPSRPTRSRHPPSYLRDYHMTFTSTGPSS----SPGIRY 811

Query: 197  SICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILT 376
             + + +S ++LSH  + FI +IS + EPK+YA+ASKS  W +AM  E+TALE NNTW +T
Sbjct: 812  PLDSVISYNRLSHPFRHFIMSISLLTEPKSYAEASKSDCWIKAMTDEITALEANNTWTVT 871

Query: 377  ELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRL 556
             LPP+K  IGCKW+YKVK+ +DGS+ER+K RLVA GYTQ EG+D+ DTF+PVA +TTV L
Sbjct: 872  SLPPHKTAIGCKWIYKVKHHADGSVERHKARLVAKGYTQLEGLDFLDTFAPVAKLTTVHL 931

Query: 557  IIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQAS 736
            ++++AA   WFL QLD+NNAFLHGDLNEEVYM  PPG       +VCKL +SLYGLKQAS
Sbjct: 932  LLSLAAIHNWFLKQLDINNAFLHGDLNEEVYMHLPPGLTTTTPGQVCKLNRSLYGLKQAS 991

Query: 737  RQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQH 916
            RQW+ +L++ ++  GF  S +D SLF+K  +   T L VYVDDI+LAGN++ EI+ I   
Sbjct: 992  RQWYARLSTFIMQQGFHHSSADHSLFLKFTNSACTALLVYVDDIVLAGNDLTEIHQITAL 1051

Query: 917  LDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFD 1096
            L   F IKDLG L Y LG+E+AR+S  IHLCQRKY LD+L++TG+L C P+ST MD K  
Sbjct: 1052 LHKTFKIKDLGDLTYFLGLEVARNSIEIHLCQRKYTLDILSDTGMLACCPSSTLMDYKAA 1111

Query: 1097 PQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRY 1276
              +   TPLTDPS YR+LIGR++YLT T P++++++  LSQF SKPT  H  AA R+LRY
Sbjct: 1112 LSSDTGTPLTDPSAYRQLIGRLIYLTNTHPDITHAVQHLSQFASKPTTYHQHAAFRILRY 1171

Query: 1277 IKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTIS 1456
            +K  PG+GIF S+NS L LK F+D+DWA C DTRRSI+G+AV+LG+SLISWK+KKQ T+S
Sbjct: 1172 LKQAPGRGIFLSANSSLQLKSFSDSDWAGCMDTRRSITGFAVYLGHSLISWKSKKQATVS 1231

Query: 1457 RSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTKH 1636
            RSS+EAEYRA+A  +CE+QWLTYLL+D ++   +PAL+Y D++S   I+ N   HERTKH
Sbjct: 1232 RSSSEAEYRALASTSCEIQWLTYLLEDFRLQFIRPALLYCDNQSVLQIACNQVFHERTKH 1291

Query: 1637 IQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAPLEGG 1816
            I++DCH VREK+  GLLKL+ + S+ Q ADI+TK L P  FN    KL M DI++ L GG
Sbjct: 1292 IEIDCHLVREKVSNGLLKLLPVSSSAQLADIYTKALSPSRFNELNSKLGMSDIYSQLAGG 1351


>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
            from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score =  638 bits (1646), Expect = 0.0
 Identities = 321/597 (53%), Positives = 420/597 (70%), Gaps = 4/597 (0%)
 Frame = +2

Query: 26   PGPSNNSENHMSS--PSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYASTGKQYS 199
            P PS+  ++  +S  P+Q +   +  RNR  P+YLQ Y     P+  +       G  +S
Sbjct: 93   PQPSSTDQSSSTSHPPTQPSTSSRPQRNRRPPSYLQDYQHYQLPAATNHP-----GTPHS 147

Query: 200  ICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILTE 379
            I N +S   LS  H  F   IS+  EPKTY QASK   W +AM+ E+ ALE+NNTW +T 
Sbjct: 148  IFNCISYHNLSPQHLHFTLAISASIEPKTYKQASKFTHWNEAMQAEINALEQNNTWTMTT 207

Query: 380  LPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLI 559
            LPP K   GCKWV++VK+++DGS ERYK RLVA GYTQ  G+DYFDTFSPVA ITTVRL+
Sbjct: 208  LPPGKTPXGCKWVFRVKHRADGSTERYKARLVAKGYTQI-GVDYFDTFSPVAKITTVRLL 266

Query: 560  IAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASR 739
            +A+A +  W + QLDVNNAFLHGDLNE+VYM+PPPG+  ++ K VCKL KS+YGLKQASR
Sbjct: 267  LALATSRHWHIQQLDVNNAFLHGDLNEDVYMLPPPGFSHDSTK-VCKLHKSIYGLKQASR 325

Query: 740  QWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHL 919
            QWF KLT+ L++ G+ QS +D S+F K +S+  TVL +YVDDIIL G +  EI  +KQ L
Sbjct: 326  QWFSKLTTALISLGYIQSTADHSMFTKKHSEDFTVLLIYVDDIILTGTSSPEIMKVKQFL 385

Query: 920  DDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSK--F 1093
            D  F IKDLG LKY LG+E+AR+S+GIH+ QRKYAL++L E+G + CKP  TPM +K  +
Sbjct: 386  DTTFRIKDLGDLKYFLGLEVARTSQGIHISQRKYALEILQESGFIECKPAKTPMATKSVY 445

Query: 1094 DPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLR 1273
               +     L+D + YR+L+G++LYLT TR +L++++  LSQF+ KPT  HL AAHRVLR
Sbjct: 446  KLTSTDGELLSDITSYRQLVGKLLYLTSTRLDLTFAVQQLSQFMDKPTTNHLQAAHRVLR 505

Query: 1274 YIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTI 1453
            Y+K  P  G+FY ++S   LK F+D+DWA CP+TRRSI+GY +F G +LISW+ KKQPT+
Sbjct: 506  YLKGCPSTGLFYPASSSFELKAFSDSDWAGCPETRRSITGYCIFFGEALISWRAKKQPTV 565

Query: 1454 SRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTK 1633
            SRSS+EAEYRA+A   CE+QWL YLL DL +P      V+ D+KS   I+ N   HERTK
Sbjct: 566  SRSSSEAEYRALASTVCEVQWLHYLLCDLHVPISHATPVFCDNKSTIQIASNPTFHERTK 625

Query: 1634 HIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAP 1804
            HI++DCH VREKLQ+ ++ L+   S+ Q AD+FTK L  Q F     KL ML+IH+P
Sbjct: 626  HIEIDCHIVREKLQKDIVHLLPCTSSAQLADLFTKALAAQPFQDMISKLGMLNIHSP 682


>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1136

 Score =  653 bits (1685), Expect = 0.0
 Identities = 328/605 (54%), Positives = 438/605 (72%)
 Frame = +2

Query: 2    SNISETNIPGPSNNSENHMSSPSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYAS 181
            S+I E++ P P    + H S P     +R+STR R  P YLQ +      +  S+  ++S
Sbjct: 542  SSIVESSEPPPP---DQHSSPPP----LRRSTRPRRPPTYLQDFH----GAFTSTGPHSS 590

Query: 182  TGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNN 361
            TG ++ + + +S D+LS S   ++ +ISS+ +PK + +ASKS  W +AM  E++ALE NN
Sbjct: 591  TGIRHPLHSFISYDRLSPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANN 650

Query: 362  TWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANI 541
            TW+LT LPP+K  IGC+WVYKVK+K+DGSI+RYK RLVA GYTQ EG+D+FDTFSPVA +
Sbjct: 651  TWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKL 710

Query: 542  TTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYG 721
            TTVRL+I++AA     L QLDVNN+FLHGDLNEEVYM  PPG       +VC+L +SLYG
Sbjct: 711  TTVRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQVCRLQRSLYG 770

Query: 722  LKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEIN 901
            LKQASRQW+ +L+S L+ +G+  S SD SLF+K +    T + +YVDDI+LAGN++ EI+
Sbjct: 771  LKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDDIVLAGNDLTEIH 830

Query: 902  NIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPM 1081
            ++   L + F IKDLG LKY LG+E+AR+  GIHLCQRKY LDLL++TG+L  KP STPM
Sbjct: 831  HLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLASKPVSTPM 890

Query: 1082 DSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAH 1261
            D       ++ TP TD + YRRL+GR++YL  TRP ++Y++  LSQF+S P  AH  A  
Sbjct: 891  DYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFVSNPPTAHRQALF 950

Query: 1262 RVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKK 1441
            R+L Y+K  PG GIF S NS + L+ F+D DWA CPDTRRSI+G+AV+LG+SLISWK+KK
Sbjct: 951  RILCYLKGTPGSGIFLSVNSSVQLRAFSDYDWAGCPDTRRSITGFAVYLGDSLISWKSKK 1010

Query: 1442 QPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNH 1621
            Q T+SRSS+EAEYRA+A  TCELQWL+YLL+D  I   +P+++Y D++ A  I+ N   H
Sbjct: 1011 QITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDNQFALQIASNPIFH 1070

Query: 1622 ERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHA 1801
            ERTKHI++DCH VR+K+  GLLKL+ + S+ Q ADI TKPL P +F+    KL ML+IH+
Sbjct: 1071 ERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFHSHYSKLGMLNIHS 1130

Query: 1802 PLEGG 1816
             LEGG
Sbjct: 1131 QLEGG 1135


>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
          Length = 1128

 Score =  653 bits (1684), Expect = 0.0
 Identities = 326/570 (57%), Positives = 419/570 (73%), Gaps = 5/570 (0%)
 Frame = +2

Query: 2    SNISETNIPGPSNNSENHMSSPSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQY-- 175
            +++ E++IP      EN + + +    +R+S R +  P YLQ Y C     + S+TQ   
Sbjct: 526  TSVIESSIP------ENTIHANNDANSLRRSERTKHLPKYLQNYYCGNMTKIDSATQAPS 579

Query: 176  --ASTGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTAL 349
              +S+GK Y I + LS  +LS  HK FI  ISS  EPKTY Q      WQ AM  E+ AL
Sbjct: 580  SCSSSGKPYCIFSFLSDSRLSSKHKAFIYVISSTFEPKTYKQXVSIPHWQTAMTDEIKAL 639

Query: 350  EKNNTWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSP 529
            + N TW L  LPPNK  IGCKWVY+VK+K+DGS+ERYK RLVA GYTQ+EG+D+FDT+SP
Sbjct: 640  KHNKTWDLAILPPNKTAIGCKWVYRVKFKADGSVERYKARLVAKGYTQQEGLDFFDTYSP 699

Query: 530  VANITTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIK 709
            VA +TTVR+++A+AAA  W+LHQLDVNNAFLHGDLNEEVYM  P G+   ND RVCKL K
Sbjct: 700  VAKMTTVRVLLAIAAAKQWYLHQLDVNNAFLHGDLNEEVYMQLPLGFSTPNDPRVCKLKK 759

Query: 710  SLYGLKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNM 889
            SLYGL+QASRQW+ KL+S LL +GF Q+++DSSLFIK  S     L +YVDD+I+A N++
Sbjct: 760  SLYGLRQASRQWYSKLSSSLLKFGFSQAKTDSSLFIKQTSTSFIALLIYVDDVIIASNDL 819

Query: 890  FEINNIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPT 1069
             EI+ +K+ L + FTIKDLG LKY +GIE+ARS+KGI L QRKYALD+L ++G  G KP 
Sbjct: 820  KEIDVVKKFLHESFTIKDLGELKYFVGIEVARSAKGIVLSQRKYALDVLKDSGFFGSKPI 879

Query: 1070 STPMDSKFDPQTAANTP-LTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAH 1246
              PM+S        ++P L+DP+ Y+RLIG++LYLTITR +L+Y +  L+QF+S P   H
Sbjct: 880  GFPMESSLKLTANDSSPLLSDPASYKRLIGKLLYLTITRLDLAYXVQALNQFMSNPHSTH 939

Query: 1247 LTAAHRVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLIS 1426
            L AA RVLRYIK   G+G+F  ++S+LHLK ++D+DW  C +TRRS++G+ VF+G+SLIS
Sbjct: 940  LQAAERVLRYIKATLGQGLFLKASSDLHLKAYSDSDWGGCINTRRSVTGFTVFIGDSLIS 999

Query: 1427 WKTKKQPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQ 1606
            WK+KKQPTISRSSA+AEYRA+A  TCELQWL YLL DL + H QPAL+YTDSK A  I+ 
Sbjct: 1000 WKSKKQPTISRSSAKAEYRALATTTCELQWLVYLLVDLNVKHPQPALLYTDSKPASKIAS 1059

Query: 1607 NACNHERTKHIQLDCHFVREKLQEGLLKLI 1696
            N  +HERTKHIQLDCH VREKLQE ++K +
Sbjct: 1060 NPVHHERTKHIQLDCHLVREKLQEEMVKAV 1089


>gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 515

 Score =  630 bits (1624), Expect = 0.0
 Identities = 301/514 (58%), Positives = 392/514 (76%)
 Frame = +2

Query: 275  EPKTYAQASKSLEWQQAMKTELTALEKNNTWILTELPPNKHCIGCKWVYKVKYKSDGSIE 454
            EPK + +ASKS  W +AM  E++ALE NNTW+LT LPP+K  IGC+WVYK K+K+DGSI+
Sbjct: 1    EPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKAKHKADGSID 60

Query: 455  RYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLIIAVAAAS*WFLHQLDVNNAFLHGDL 634
            RYK RLVA GYTQ EG+D+FDTFSPVA +T VRL++++ A   W L QLDVNN+FLHGDL
Sbjct: 61   RYKARLVAKGYTQMEGLDFFDTFSPVAKLTIVRLLLSLVAIHNWHLKQLDVNNSFLHGDL 120

Query: 635  NEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASRQWFQKLTSCLLTYGFQQSRSDSSLF 814
            NEEVYM  PPG       +VC+L +SLYGLKQASRQW+ +L+S L+ +G+  S SD SLF
Sbjct: 121  NEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLF 180

Query: 815  IKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHLDDQFTIKDLGTLKYILGIEIARSSK 994
            +K +   IT + +YVDD++LAGN++ EI+++   L + F IKDLG LKY LG+E+AR+  
Sbjct: 181  LKCSPATITAILIYVDDLVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHT 240

Query: 995  GIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFDPQTAANTPLTDPSQYRRLIGRMLYLT 1174
            GIHLCQRKY LDLL++TG+L  KP STPMD       ++ TPLTD + YRRL+GR++YLT
Sbjct: 241  GIHLCQRKYTLDLLSDTGMLASKPVSTPMDYSTHLFASSGTPLTDTAAYRRLVGRLIYLT 300

Query: 1175 ITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRYIKNNPGKGIFYSSNSELHLKGFTDAD 1354
             TRP+++Y++  LSQF++ PT AH  A  R+LRY+K  PG GIF S NS + L+ F+D+D
Sbjct: 301  NTRPDITYAVQQLSQFVTNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSD 360

Query: 1355 WAKCPDTRRSISGYAVFLGNSLISWKTKKQPTISRSSAEAEYRAIALITCELQWLTYLLQ 1534
            WA CPDTRRSI+G+AV+LG+SLISWK+KKQ T+SRSS+EAEYRA+A  TCELQWL+YLL+
Sbjct: 361  WAGCPDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLK 420

Query: 1535 DLKIPHRQPALVYTDSKSAYCISQNACNHERTKHIQLDCHFVREKLQEGLLKLIFLPSAQ 1714
            D  I   +P+++Y D++ A  IS N   HERTKHI++DCH VR+K+  GLLKL+ + S+ 
Sbjct: 421  DFHIDLIRPSILYCDNQFALQISSNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSL 480

Query: 1715 QTADIFTKPLPPQLFNHFTDKLSMLDIHAPLEGG 1816
            Q ADI TKPL P +F     KL ML+IH+ LEGG
Sbjct: 481  QLADILTKPLSPFVFRSHCSKLGMLNIHSQLEGG 514


>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  651 bits (1679), Expect = 0.0
 Identities = 331/586 (56%), Positives = 417/586 (71%), Gaps = 4/586 (0%)
 Frame = +2

Query: 59   SSPSQITVMRKSTRNRTTPNYLQVYDCVL----PPSLQSSTQYASTGKQYSICNSLSIDQ 226
            SSPSQ+   RKSTR++ +P YL+ Y C L    PP      +Y        +   LS D 
Sbjct: 836  SSPSQL---RKSTRHKCSPAYLKDYHCNLLIGVPPPEDKHIRYP-------LNTVLSYDS 885

Query: 227  LSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILTELPPNKHCIG 406
            LS S+  ++ +I++  EP T+ QA K+  W +AM+ EL ALE N TW +  LPP K  IG
Sbjct: 886  LSASYSRYVLSITTHVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIMPLPPGKTPIG 945

Query: 407  CKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLIIAVAAAS*W 586
             KWVYK+KYKSDGSIERYK RLV  GYTQ +G+DYFDTF+PVA ++TVR+++A+A+   W
Sbjct: 946  SKWVYKIKYKSDGSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRMLLAIASCQHW 1005

Query: 587  FLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASRQWFQKLTSC 766
             LHQLD+NNAFLHGDL E+VYM  P G   +    VCKL KSLYGLKQASRQWF KL+S 
Sbjct: 1006 ELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKPNHVCKLNKSLYGLKQASRQWFAKLSSF 1065

Query: 767  LLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHLDDQFTIKDL 946
            LL+  ++QS+ D SLF K +  H TV+ +YVDD+I+AG +  EIN+IKQ LD +F IKDL
Sbjct: 1066 LLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDDLIIAGTDSEEINHIKQSLDVKFKIKDL 1125

Query: 947  GTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFDPQTAANTPLT 1126
            G L+Y LG+EIARS  GI L QRKY LDLL ET  L  KP  TP+          ++P  
Sbjct: 1126 GPLRYFLGLEIARSHLGISLSQRKYTLDLLDETSFLAGKPVLTPIIKGTRLSHTTDSPYE 1185

Query: 1127 DPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRYIKNNPGKGIF 1306
            DP+ YRRLIG++LYL  TRP++SYS+  LSQFLS P  +H  AA RVLRY+K NPG+G+F
Sbjct: 1186 DPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLSCPQQSHYQAAIRVLRYLKGNPGQGLF 1245

Query: 1307 YSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTISRSSAEAEYRA 1486
            Y ++S L LK F+D+DWA CPDTRRS+SGY++FLGNSLISWK KKQ TISRSS+EAEYRA
Sbjct: 1246 YPADSPLQLKAFSDSDWASCPDTRRSLSGYSIFLGNSLISWKCKKQSTISRSSSEAEYRA 1305

Query: 1487 IALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTKHIQLDCHFVRE 1666
            +A   CE+QWLTYLLQD  +P   PAL+Y D++SA  I+ NA  HERTKHI++DCH VRE
Sbjct: 1306 LAATACEIQWLTYLLQDFSVPFTTPALLYCDNQSARHIASNAVFHERTKHIEIDCHLVRE 1365

Query: 1667 KLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAP 1804
            KLQ GL  L+ + S+ Q ADI TKPL P  F +   KL +++I++P
Sbjct: 1366 KLQAGLFHLLPIASSHQLADILTKPLDPSPFQYLLSKLGVINIYSP 1411


>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1013

 Score =  636 bits (1640), Expect = 0.0
 Identities = 328/609 (53%), Positives = 417/609 (68%), Gaps = 4/609 (0%)
 Frame = +2

Query: 2    SNISETNIPGPSNNSENHMSSPSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYAS 181
            S  S T+IP P    +    +P+     R STR R  P+YL+ Y C L         ++ 
Sbjct: 406  SPTSSTSIP-PEQPHQPLSPAPAP---SRHSTRMRQPPSYLKDYHCSLLAPTGRINSFSG 461

Query: 182  TGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNN 361
                +SI ++L+ D  S S+K F  ++S+  EP TY QASK   W  AMKTEL AL+ N 
Sbjct: 462  ISTPHSISSTLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMAMKTELAALDMNQ 521

Query: 362  TWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANI 541
            TW + +LP  K  IGCKWVYK+KY SDGSIERYK RLVA GY+Q EG+DY DT+SPVA +
Sbjct: 522  TWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLDYLDTYSPVAKL 581

Query: 542  TTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDK----RVCKLIK 709
            TTVR+++A+ A   WFL QLDVNNAFLHGDL+EEVYM  PPG    +      +VCKL K
Sbjct: 582  TTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSSSNTAPKVCKLHK 641

Query: 710  SLYGLKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNM 889
            S+YGLKQASRQW+ KL+S L++ G+  S +D SLFIKS+S H T L VYVDDIILAGN+ 
Sbjct: 642  SIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLVYVDDIILAGNDK 701

Query: 890  FEINNIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPT 1069
             EI+ IK  L   F IKDLG L+Y LG+EIARS+KGI L QRKY L++L + G L  KP+
Sbjct: 702  PEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEILEDVGFLAAKPS 761

Query: 1070 STPMDSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHL 1249
            STP +      +   +P  D + YRRLIGR+LYLT TRP++SY +  LSQF+SKP   H 
Sbjct: 762  STPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLSQFVSKPLDIHY 821

Query: 1250 TAAHRVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISW 1429
             AA R+LRY+K + G+G+FYSS++ L L  F D+DWA C  +R+SI+G+ VFLG+SLISW
Sbjct: 822  QAATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCSISRKSITGFCVFLGSSLISW 881

Query: 1430 KTKKQPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQN 1609
            ++KKQ TISRSS+EAEYRA+A +TCELQWL YL  DLK     P  V+ D+KSA  ++ N
Sbjct: 882  RSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTSLNFPTSVFCDNKSAIYLAHN 941

Query: 1610 ACNHERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSML 1789
               HERTKHI++DCH +REK+Q  LL L+ +PS+ Q AD FTKPL    FN F  KL + 
Sbjct: 942  PTFHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLADAFTKPLHATSFNSFVSKLGLY 1001

Query: 1790 DIHAPLEGG 1816
            D+H+   GG
Sbjct: 1002 DVHSSACGG 1010


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  622 bits (1604), Expect = 0.0
 Identities = 322/607 (53%), Positives = 414/607 (68%), Gaps = 4/607 (0%)
 Frame = +2

Query: 8    ISETNIPGPSNNSENHMSSPSQI---TVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYA 178
            +S T +P  S++   H +  S     + +R S+R + +P+YLQ Y C   PS  S +   
Sbjct: 9    LSSTILPNLSSDQTIHSTPRSTFNPSSTLRVSSRTKKSPSYLQDYIC--NPSTNSVSSAN 66

Query: 179  STGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKN 358
             +   Y + N +S   LS+S   F  ++ S  EPK+YA+A KS  W+QAM+ EL AL++ 
Sbjct: 67   KSCILYPLSNFISHKHLSNSQHTFALSLVSHIEPKSYAEAIKSDCWKQAMQLELNALDQT 126

Query: 359  NTWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVAN 538
             TW + ++P     IGCKWV ++KY  DGSIERYK RLVA GY Q EG+DYFDTFSPVA 
Sbjct: 127  GTWTVVDIPSQVKPIGCKWVCRIKYNDDGSIERYKARLVAKGYNQIEGLDYFDTFSPVAK 186

Query: 539  ITTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLY 718
            IT VRL+IA+A+ + WFLHQLDVNNAFLHGDL E VY   PPG       +VCKL KSLY
Sbjct: 187  ITIVRLVIALASINHWFLHQLDVNNAFLHGDLQENVYKKIPPGLSTFKPNQVCKLSKSLY 246

Query: 719  GLKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEI 898
            GLKQASR+W++KLT+ L++  ++Q+ SD+SLF K  S+  T++ VYVDDIILAGN++ E 
Sbjct: 247  GLKQASRKWYEKLTTLLISNDYKQAASDASLFTKLTSETFTIILVYVDDIILAGNSLTEF 306

Query: 899  NNIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTP 1078
            + IK  L   F IKDLG LKY LG+E+A S  GI LCQRKY LDLL ++GLLG KP STP
Sbjct: 307  HIIKNALHQAFKIKDLGILKYFLGLEVAHSHSGISLCQRKYCLDLLNDSGLLGSKPVSTP 366

Query: 1079 MDSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAA 1258
             D         +    D S YRRLIGR++YL  TRP++++    LSQFLSKPT  H  A 
Sbjct: 367  SDPSIKLHNDTSLLFPDISAYRRLIGRLIYLNTTRPDITFITQQLSQFLSKPTQTHYHAT 426

Query: 1259 HRVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTK 1438
             RVL+Y+K +PGKGIF+   S LH++G+TDADW  C DTRRSISG+  FLG SLI W+TK
Sbjct: 427  LRVLKYLKGSPGKGIFFPRASGLHIQGYTDADWVGCKDTRRSISGHCFFLGQSLICWRTK 486

Query: 1439 KQPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACN 1618
            KQPT+S+SS+EAEYRA+A  TCE+QWL YLL+DL++   Q  ++Y D++SA  I+ N   
Sbjct: 487  KQPTVSKSSSEAEYRAMASATCEMQWLLYLLRDLQVQCVQLPVLYCDNQSAMHIASNPVF 546

Query: 1619 HERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDI- 1795
            HERTKH+++DCH VREKLQ G+ KL+ + +  Q  D FTK L  Q F+    KL MLDI 
Sbjct: 547  HERTKHLEIDCHIVREKLQAGIFKLLPVTTHDQIGDSFTKALYLQPFSLLLSKLGMLDIY 606

Query: 1796 HAPLEGG 1816
            H P  GG
Sbjct: 607  HPPTCGG 613


>ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max]
          Length = 1150

 Score =  637 bits (1642), Expect = 0.0
 Identities = 323/597 (54%), Positives = 428/597 (71%), Gaps = 2/597 (0%)
 Frame = +2

Query: 23   IPGPSNNSENHMSSPSQITVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYASTGKQYSI 202
            +P    N+++  S+P+     R++ R RT P     Y      S  S+T     G ++ I
Sbjct: 244  VPIDQPNTDHTSSAPTP----RRTDRIRTRPTKYTDYQT----SFTSATITNHPGTKHPI 295

Query: 203  CNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILTEL 382
             + +S ++LS S+  FI  IS+  EPK+Y +A K   W QAM  E++ALE+NNTW+LT+L
Sbjct: 296  SSVISYNKLSSSYHSFILNISANSEPKSYNEACKHDSWVQAMHDEISALERNNTWVLTDL 355

Query: 383  PPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLII 562
            P +K+ IGCKWVYK+K+ SDGSIERYK RLVA GYTQ EG+DY DTFSPVA ITTVRL++
Sbjct: 356  PQHKNVIGCKWVYKIKHNSDGSIERYKARLVAKGYTQIEGLDYLDTFSPVAKITTVRLLL 415

Query: 563  AVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASRQ 742
            A+AA + W+L QLDVNNAFLHG L+EEVYM+ PPG  +    +VCKL +SLYGLKQASRQ
Sbjct: 416  ALAALNNWYLRQLDVNNAFLHGGLHEEVYMVLPPGMKSAKPGQVCKLQRSLYGLKQASRQ 475

Query: 743  WFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHLD 922
            W+ +L++ L  +GF+QS +D SLF    +   T L VYVDDI+L+GN++  I++I + LD
Sbjct: 476  WYARLSTFLAHHGFKQSVADYSLFTLKKANSFTALLVYVDDIVLSGNDLSVISSITKLLD 535

Query: 923  DQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFDPQ 1102
            D F IKDLG LKY LG E+AR + GI++CQRKYALDLLT+T +L CKP STP D      
Sbjct: 536  DTFKIKDLGNLKYFLGFEVARGTSGINICQRKYALDLLTDTDMLHCKPVSTPFDYYTRLH 595

Query: 1103 TAANTPLTDP--SQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRY 1276
             A+ + L+D   S YR LIGR++YLT TRP++++++  LSQF++ PT AH TA +R+LRY
Sbjct: 596  QASGSMLSDSQISSYRCLIGRLIYLTNTRPDITFAVQHLSQFIASPTTAHYTALYRILRY 655

Query: 1277 IKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTIS 1456
            IK  PG G+F+ S SEL LK F+D+DWA C DTR+SI+G++V+LG+SLISWK+KKQ  +S
Sbjct: 656  IKAAPGLGLFFPSTSELQLKAFSDSDWAGCVDTRKSITGFSVYLGSSLISWKSKKQAIVS 715

Query: 1457 RSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTKH 1636
            RSS EA YRA+  +TCE+QWLTYLL D  I ++ PALV+ D+KS   I+ N   HERTKH
Sbjct: 716  RSSFEAGYRALTSVTCEIQWLTYLLHDFDITYK-PALVFCDNKSGLHIAVNPVFHERTKH 774

Query: 1637 IQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAPL 1807
            I++DCH VR+KL  GL+KL+ + S QQ AD++TK L P  F     KL M DIH+P+
Sbjct: 775  IEIDCHIVRDKLLSGLIKLLPIASQQQLADVYTKALAPGAFRFICSKLGMNDIHSPV 831


>gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 727

 Score =  621 bits (1602), Expect = 0.0
 Identities = 328/614 (53%), Positives = 409/614 (66%), Gaps = 16/614 (2%)
 Frame = +2

Query: 23   IPGPSNNSENH---------MSSPSQI-TVMRKSTRNRTTPNYLQVYDCVLPPSLQSSTQ 172
            I    NN+ NH          +SP    T++++STR +    YL  Y C L     +S  
Sbjct: 113  ISNDHNNNINHHDESQVPLECNSPDATPTIIKRSTRTKYPLAYLTDYHCNLLTGHDTSI- 171

Query: 173  YASTGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQ-ASKSLEWQQAMKTELTAL 349
                  +Y +   LS   LS +H  F   ISS+ EPK Y + A KS  W +AM+ EL AL
Sbjct: 172  --FKDARYPLSTVLSYSNLSPTHSHFTLIISSLIEPKNYLELAIKSEHWIKAMQNELDAL 229

Query: 350  EKNNTWILTELPP-----NKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYF 514
              N TW L  LP       K  IG KWVYK+KYKSDG+IERYK RLVA GY Q EG+DYF
Sbjct: 230  RLNRTWSLVNLPTVNLPTGKVPIGSKWVYKIKYKSDGTIERYKARLVAKGYNQIEGLDYF 289

Query: 515  DTFSPVANITTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRV 694
            DTF+PVA ITTVR+++A+A+   W LHQLD+NNAFLHGDLNEEVYM  P G  +     V
Sbjct: 290  DTFAPVAKITTVRMLLAIASCQKWELHQLDINNAFLHGDLNEEVYMQIPQGLTSPKPNLV 349

Query: 695  CKLIKSLYGLKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIIL 874
            CKL KSLYGLKQAS+QWF KL++ L T  ++QS +D SLF K  + H T++ VYVDD+I+
Sbjct: 350  CKLHKSLYGLKQASKQWFAKLSNFLQTMNYKQSPNDHSLFTKHINNHFTLILVYVDDLII 409

Query: 875  AGNNMFEINNIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLL 1054
             G +  EI +IK  LD QF IKDLG LKY LG+E+ARS  GIHL QRKYALDLL++TG L
Sbjct: 410  GGTDSSEIVSIKGILDAQFKIKDLGHLKYFLGLEVARSHLGIHLSQRKYALDLLSDTGFL 469

Query: 1055 GCKPTSTPMDSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKP 1234
              KP  TPM        +  TP  DP+ YRRL+G++LYLT TRP++S+++  LSQ +S P
Sbjct: 470  AAKPVPTPMVKTNKASQSDGTPYADPAGYRRLVGKLLYLTTTRPDISFAVQQLSQHISSP 529

Query: 1235 TVAHLTAAHRVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGN 1414
            + AH  AA RVLRY+K NPG+G+FY + S   LK F+D+DW  CP + RS+SGY +FLG+
Sbjct: 530  STAHYMAATRVLRYLKGNPGQGLFYPAQSPSQLKAFSDSDWGSCPTSCRSVSGYCIFLGD 589

Query: 1415 SLISWKTKKQPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAY 1594
            SLISWK KKQ TISRSS+EAEYRA+A   CE+QWLTYLL D  IP    AL+Y D++SA 
Sbjct: 590  SLISWKCKKQSTISRSSSEAEYRALANTVCEIQWLTYLLHDFVIPFTSHALLYCDNQSAR 649

Query: 1595 CISQNACNHERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTD 1774
             I+ N   HERTKHI LDCH +REKLQ  L  L+ + S +Q ADI TKPL P  FN+   
Sbjct: 650  YIATNPVFHERTKHIDLDCHIIREKLQAKLFHLLPIRSTEQLADILTKPLEPTPFNYLLS 709

Query: 1775 KLSMLDIHAPLEGG 1816
            KL +L+I++P  GG
Sbjct: 710  KLGVLNIYSPACGG 723


>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1311

 Score =  639 bits (1649), Expect = 0.0
 Identities = 324/595 (54%), Positives = 422/595 (70%), Gaps = 4/595 (0%)
 Frame = +2

Query: 8    ISETNIPGPSNNSENHMSSPSQITVM--RKSTRNRTTPNYLQVYDCVLPPSLQSSTQYAS 181
            I ET    P   +    S+ SQ T    R+STR +  P YLQ Y      SL S     S
Sbjct: 720  IQETTDHTPLQLTSTDESAFSQRTKHEPRRSTRPKHAPTYLQDYH----HSLSSHDTKVS 775

Query: 182  TGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNN 361
            T  +Y + + LS  +LSH+HK F+ +ISS  EP +YA+AS+   W +AM+ EL AL+ NN
Sbjct: 776  TSSRYPLSSVLSYSRLSHTHKHFVMSISSTVEPSSYAEASQYDCWIKAMEAELQALQSNN 835

Query: 362  TWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANI 541
            TW LT LPP+K  IGC+WVYK+K+++DGSIERYK RLVA GYTQ EG+DY   FSPVA +
Sbjct: 836  TWKLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAKGYTQMEGLDYLYAFSPVAKL 895

Query: 542  TTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYG 721
            T VRL++A+ A + W L QLDVNNAFLHG+L+EEVYM  PPG    N + VC+L +SLY 
Sbjct: 896  TIVRLLLAMVAFNQWHLRQLDVNNAFLHGELDEEVYMQVPPGLSVPNSQMVCRLQRSLYE 955

Query: 722  LKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEIN 901
            LKQASRQWF KL+  L++ GF++S SD SLF++     IT L VYVDDIIL GN+  EI 
Sbjct: 956  LKQASRQWFTKLSGLLISLGFEKSHSDHSLFLRFTGSIITALLVYVDDIILTGNSESEIQ 1015

Query: 902  NIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPM 1081
            ++ + LD  F IKDLG LKY LG+EIARSS GIHLCQRKY LD+L+++G+LGC+P  TPM
Sbjct: 1016 DVIKLLDQAFKIKDLGNLKYFLGMEIARSSSGIHLCQRKYTLDILSDSGMLGCQPNVTPM 1075

Query: 1082 DSKFDPQTAANTPLTD--PSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTA 1255
            D     Q  A TPL+    S YRRLIGR++YLT TRP+++Y++  LSQ++S PT  H  A
Sbjct: 1076 DYSTKLQATAGTPLSTEASSSYRRLIGRLIYLTNTRPDITYAVQQLSQYMSNPTSVHQQA 1135

Query: 1256 AHRVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKT 1435
            A+R+LRY+K   G GIF S+     L+ F+D+DWA C D+R+S +G+ ++LG+S +SW++
Sbjct: 1136 AYRILRYLKGTSGSGIFLSATGTPQLRAFSDSDWAGCQDSRKSTTGFVIYLGSSPVSWQS 1195

Query: 1436 KKQPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNAC 1615
            KKQ T+SRSS+EAEYRA+A  TCELQWLTYLLQD +    +PA +Y D++SA  I+ N  
Sbjct: 1196 KKQSTVSRSSSEAEYRAMATTTCELQWLTYLLQDFRHNFTKPATIYCDNQSAIQIATNPV 1255

Query: 1616 NHERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKL 1780
             HERTKHI++DCH VR+K+  GLLKL+ +PS+ Q ADIFTK LPP +F +  +KL
Sbjct: 1256 FHERTKHIEIDCHIVRQKVTSGLLKLLPVPSSLQLADIFTKALPPTVFQNLCNKL 1310


>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1445

 Score =  634 bits (1635), Expect = 0.0
 Identities = 323/601 (53%), Positives = 415/601 (69%), Gaps = 2/601 (0%)
 Frame = +2

Query: 8    ISETNIPGPSNNSENHMSSPSQ-ITVM-RKSTRNRTTPNYLQVYDCVLPPSLQSSTQYAS 181
            +  TN   PS   +  ++   Q I V  R STR +  PNYL  Y C    S  S+  Y  
Sbjct: 851  LETTNTHTPSEQLQQPLTEEMQDIPVQPRVSTRQKFRPNYLNQYHCYSATSSNSACLYP- 909

Query: 182  TGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNN 361
                  + + LS ++ S ++  F  +IS+  EP  YAQA     W+QAM TEL AL +N 
Sbjct: 910  ------LHSYLSYNKCSSNYTAFCLSISAHVEPSNYAQAITQDCWKQAMMTELDALNRNR 963

Query: 362  TWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANI 541
            TW L  LPP +  IGCKWVY++KYK+DGS++R+K RLVA G+TQ EG+DYF+TFSPVA +
Sbjct: 964  TWSLVSLPPGRKLIGCKWVYRIKYKADGSVDRHKARLVAKGFTQTEGIDYFETFSPVAKL 1023

Query: 542  TTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYG 721
            TTVR ++A+A+ + WFLHQLDV+NAFLHGDL EEVYM PP G    + K VCKL KSLYG
Sbjct: 1024 TTVRFLLALASTNNWFLHQLDVDNAFLHGDLEEEVYMRPPQGLQLPDSKLVCKLEKSLYG 1083

Query: 722  LKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEIN 901
            LKQASR W QKL S LL  G++QS +D SLFIK     IT+L VYVDD++L+GNN  EI 
Sbjct: 1084 LKQASRNWNQKLNSELLHLGYKQSSADHSLFIKKQGSSITILLVYVDDVVLSGNNFSEIQ 1143

Query: 902  NIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPM 1081
             +KQHL  +F IKDLG LK+ LG+E+ARS KGI L QRKY L+L+ E+GLLG KP  TP 
Sbjct: 1144 IVKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQRKYCLELIDESGLLGSKPAPTPA 1203

Query: 1082 DSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAH 1261
            D          + L DP+ +RRLIGR+LYLT TRP++S+S+  LSQF+S+P   HL AA 
Sbjct: 1204 DPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPREPHLQAAL 1263

Query: 1262 RVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKK 1441
            R++RY+K  PG G+FY + + L ++ F+D+DWA C  TR+S++GY VFLG SL+SWK+KK
Sbjct: 1264 RIVRYLKGAPGLGLFYPAENHLRIQAFSDSDWATCSTTRKSVTGYCVFLGKSLVSWKSKK 1323

Query: 1442 QPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNH 1621
            Q T+SRSS+EAEYRA+A +TCELQWL +L   L +    P  V++DS+SA  I++N   H
Sbjct: 1324 QSTVSRSSSEAEYRALASLTCELQWLKFLSDSLFVKIPAPFSVFSDSQSAIQIAKNPTFH 1383

Query: 1622 ERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHA 1801
            ERTKHI++DCH +R KLQE LL LI +PSA Q AD FTK L P+LF H   KL + +IH 
Sbjct: 1384 ERTKHIEVDCHLIRIKLQEELLHLIHVPSANQLADAFTKSLYPKLFLHAISKLGLSNIHG 1443

Query: 1802 P 1804
            P
Sbjct: 1444 P 1444


>gb|AJY78065.1| putative polyprotein [Glycine max]
          Length = 523

 Score =  602 bits (1553), Expect = 0.0
 Identities = 299/522 (57%), Positives = 376/522 (72%), Gaps = 1/522 (0%)
 Frame = +2

Query: 257  TISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILTELPPNKHCIGCKWVYKVKYK 436
            +I+   EP++Y +ASK   W  AMK EL AL KN TW + ELPP+   IGCKWVYKVK+K
Sbjct: 2    SITHCTEPQSYEEASKHEHWVTAMKEELNALAKNCTWKIVELPPHTKPIGCKWVYKVKHK 61

Query: 437  SDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLIIAVAAAS*WFLHQLDVNNA 616
            ++G IERYK RLVA GY Q EG+DYF+TFSPVA ITTVR ++AVAA   W LHQLDVNNA
Sbjct: 62   ANGQIERYKARLVAKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDVNNA 121

Query: 617  FLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASRQWFQKLTSCLLTYGFQQSR 796
            FLHGDL E+VYM  P G        VCKL KSLYGLKQASR+W++KLT+ LL  G+ QS 
Sbjct: 122  FLHGDLQEDVYMKIPDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSI 181

Query: 797  SDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHLDDQFTIKDLGTLKYILGIE 976
            SD SLF  +     T L VYVDDIILAG+++ E + IK  LD  F IK+LG LKY LG+E
Sbjct: 182  SDYSLFTLTKGNTFTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLE 241

Query: 977  IARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFDPQTAANTPLTDPSQYRRLIG 1156
            +A S  GI + QRKY LDLL ++GLLGCKP STP+D+     +AA TP  D S YRR++G
Sbjct: 242  VAHSRLGITISQRKYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVG 301

Query: 1157 RMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRYIKNNPGKGIFYSSNSELHLK 1336
            ++LYL  TRP+++++   LSQF+  PT  H  AA RVLRY+KNNPG+GIF+S  SE+ L 
Sbjct: 302  KLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLI 361

Query: 1337 GFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTISRSSAEAEYRAIALITCELQW 1516
            G++DADWA C D+R+SISGY  F+G SL+SW+ KKQ T+SRSS+EAEYRA++   CELQW
Sbjct: 362  GYSDADWAGCMDSRKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQW 421

Query: 1517 LTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTKHIQLDCHFVREKLQEGLLKLI 1696
            L YL  DL++   +   +Y D++SA  I+ N   HERTKH+++DCH VREKL +G LKL+
Sbjct: 422  LLYLFADLRVQLTRTPTLYCDNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLL 481

Query: 1697 FLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDI-HAPLEGGC 1819
             + ++ Q AD  TK L P  F+ F  KLSM++I H  LEGGC
Sbjct: 482  PVSTSDQVADFLTKALAPPKFHDFVSKLSMINIYHDKLEGGC 523


>gb|KYP42321.1| Copia protein [Cajanus cajan]
          Length = 1456

 Score =  629 bits (1623), Expect = 0.0
 Identities = 315/601 (52%), Positives = 419/601 (69%), Gaps = 2/601 (0%)
 Frame = +2

Query: 8    ISETNIPGPSNNSENHMSSPSQITV--MRKSTRNRTTPNYLQVYDCVLPPSLQSSTQYAS 181
            I    +  P   S N  +  SQ+ +   R STR R  P YLQ Y C    +L SS+  A+
Sbjct: 860  IPTATLSTPELPSSNTTNDASQVVMPQTRVSTRIRKPPRYLQEYYC---ENLASSS--AA 914

Query: 182  TGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNN 361
            +   Y + + ++ +  S SH  F  +IS+  EP ++ +A+    W++AM+ EL ALEKN 
Sbjct: 915  SNCLYPLSSFVTYNNCSPSHTSFCLSISAQHEPTSFKEANSEECWRRAMEAELQALEKNQ 974

Query: 362  TWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANI 541
            TW L  LP  K  +GCKWVY+VKYK DGS+ERYK RLVA G+TQ EG+DYF+TFSPV  +
Sbjct: 975  TWSLVRLPEGKRPVGCKWVYRVKYKVDGSVERYKARLVAKGFTQTEGVDYFETFSPVVKL 1034

Query: 542  TTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYG 721
            +TVR ++++AAA  WFLHQLDV+NAFLHGDL EEVYM PPPG+   + + VCKL KSLYG
Sbjct: 1035 STVRFLLSLAAAHNWFLHQLDVDNAFLHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYG 1094

Query: 722  LKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEIN 901
            LKQASRQW QKLT  L++  F QS +D SLFIK +   IT L VYVDD++L GN+M EI+
Sbjct: 1095 LKQASRQWNQKLTEALISLNFIQSSTDHSLFIKKSHSSITALLVYVDDVVLTGNDMAEIS 1154

Query: 902  NIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPM 1081
             +K +L  QF IKDLG LK+ LG+EIARS  G+ L QRKY L+LL+E GL  CKP STP+
Sbjct: 1155 AVKAYLHAQFHIKDLGPLKFFLGLEIARSQSGLILNQRKYCLELLSEHGLTDCKPVSTPI 1214

Query: 1082 DSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAH 1261
            D+      +   PL DP+ +RRLIGR+LYLT TRP++S+++  LSQF+  P   H  AA 
Sbjct: 1215 DASVKLYASEGLPLDDPTIFRRLIGRLLYLTNTRPDISFAVQQLSQFVDSPRATHFQAAL 1274

Query: 1262 RVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKK 1441
            R+LRY+K++P  G+FY S +E  ++ F+D+DWA CP+TRRS++G+ +F G++LISWK+KK
Sbjct: 1275 RILRYLKSSPALGLFYPSQTEHRIQAFSDSDWASCPNTRRSVTGFCIFYGSALISWKSKK 1334

Query: 1442 QPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNH 1621
            Q T+SRSS+EAEYRA+A +TCELQWL +L  DL I    P  ++ DS+SA  I++N   H
Sbjct: 1335 QSTVSRSSSEAEYRALASVTCELQWLLFLCHDLSINIPTPFSIFCDSQSAIYIAKNPTFH 1394

Query: 1622 ERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHA 1801
            ERTKHI++DCH  R K+Q+GL+ L  +PS  Q AD+FTK L P+ F     KL ++DI+ 
Sbjct: 1395 ERTKHIEVDCHLTRLKIQQGLIHLFHVPSKSQLADVFTKALYPRNFTEAVSKLCLIDIYN 1454

Query: 1802 P 1804
            P
Sbjct: 1455 P 1455


>ref|XP_009338880.1| PREDICTED: uncharacterized protein LOC103931184 [Pyrus x
            bretschneideri]
          Length = 1143

 Score =  620 bits (1598), Expect = 0.0
 Identities = 304/585 (51%), Positives = 413/585 (70%), Gaps = 4/585 (0%)
 Frame = +2

Query: 62   SPSQITVMRKSTRNRTTPNYLQVY----DCVLPPSLQSSTQYASTGKQYSICNSLSIDQL 229
            +PS   ++R+S+R    P YL  Y      +L P + SS+  ++   ++ +   +S   L
Sbjct: 561  APSSQPLIRQSSRLTRPPAYLNDYVAHHAALLAPGIASSSVSST---RHPLHRYVSYASL 617

Query: 230  SHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTELTALEKNNTWILTELPPNKHCIGC 409
            S +H+ F+  +S   EP +Y QA    +W  AM  EL ALE+N TW +  L      IGC
Sbjct: 618  SSAHQSFVHNVSHQMEPTSYDQARHDPQWVAAMNNELQALEENQTWSMVPLLAGHRAIGC 677

Query: 410  KWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFDTFSPVANITTVRLIIAVAAAS*WF 589
            KWV+K+KY SDG+IERYK RLVA G+TQ EG+DY +TF+PVA + TVR ++ VAA   W 
Sbjct: 678  KWVFKIKYHSDGTIERYKARLVAKGFTQREGIDYKETFAPVAKLITVRCLLTVAAVRHWP 737

Query: 590  LHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVCKLIKSLYGLKQASRQWFQKLTSCL 769
             HQ+DV NAFLHG+L+EEVYM+PPPGY  + ++ VC+L KSLYGLKQASR WFQK +S +
Sbjct: 738  FHQMDVQNAFLHGELHEEVYMLPPPGYRRQGERVVCRLKKSLYGLKQASRSWFQKFSSAI 797

Query: 770  LTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILAGNNMFEINNIKQHLDDQFTIKDLG 949
               GF QSR+D SLF K     IT++ +YVDD+++ GNN   IN++KQ L   F IKDLG
Sbjct: 798  HDIGFIQSRADYSLFTKVYGSSITIVLLYVDDMVITGNNDGAINDLKQFLSRCFRIKDLG 857

Query: 950  TLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLGCKPTSTPMDSKFDPQTAANTPLTD 1129
             LKY LG+E+ARS  GI + QRKY LD+L E GLLG KP+  PM+         +  L D
Sbjct: 858  PLKYFLGVEVARSKAGIAISQRKYTLDILEEAGLLGAKPSKVPMEPDLVLLPTGSDLLKD 917

Query: 1130 PSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPTVAHLTAAHRVLRYIKNNPGKGIFY 1309
            P+QYR+++G+++YLTITRPE++Y+++TLSQF+ +P   HL AAHR+LRY+KN PG+G+ +
Sbjct: 918  PTQYRQMVGKLIYLTITRPEITYAVNTLSQFMQEPRRHHLDAAHRLLRYLKNAPGQGLLF 977

Query: 1310 SSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNSLISWKTKKQPTISRSSAEAEYRAI 1489
            SS S+L+L G+ DADWA+CP TRRS++GY +FLGNSLISWK+KKQ T++RSSAEAEYR++
Sbjct: 978  SSQSKLNLTGYCDADWARCPITRRSVTGYCIFLGNSLISWKSKKQVTVARSSAEAEYRSM 1037

Query: 1490 ALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYCISQNACNHERTKHIQLDCHFVREK 1669
            A  TCEL WL YLL+DL+I H  PA ++ D+++A  I+ N   HERTKHI+LDCH +RE+
Sbjct: 1038 AAATCELTWLRYLLKDLQIIHPNPAKLFCDNQAALHIAVNPVFHERTKHIELDCHTIRER 1097

Query: 1670 LQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDKLSMLDIHAP 1804
            +Q G +K  ++ + +Q AD+FTKPL    F+    KL +LDIHAP
Sbjct: 1098 IQRGEIKTAYIHTGEQVADMFTKPLRSPAFHLLLCKLGVLDIHAP 1142


>gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 810

 Score =  606 bits (1562), Expect = 0.0
 Identities = 314/609 (51%), Positives = 405/609 (66%), Gaps = 14/609 (2%)
 Frame = +2

Query: 20   NIPGPSNNSENHMSSPS--------------QITVMRKSTRNRTTPNYLQVYDCVLPPSL 157
            +I   SNN ENH   P               Q    R S R+++ P YL  Y C      
Sbjct: 230  SIENASNNFENHTQDPPIEMSQSIPIETGQIQPITTRVSLRSKSRPGYLDQYHCY----- 284

Query: 158  QSSTQYASTGKQYSICNSLSIDQLSHSHKVFIATISSIPEPKTYAQASKSLEWQQAMKTE 337
                            N++S D  S+S       I        + +AS    W+QAM  E
Sbjct: 285  ----------------NTVSSDSTSNSLYPMHLYI--------FKEASTKDCWKQAMIAE 320

Query: 338  LTALEKNNTWILTELPPNKHCIGCKWVYKVKYKSDGSIERYKVRLVANGYTQEEGMDYFD 517
            L ALE+N TW L  LPP K  IGCKWVY+ K+K++G++ERYK RLVA G+TQ EG+DYF+
Sbjct: 321  LDALERNRTWSLVTLPPGKKLIGCKWVYRTKHKANGTVERYKARLVAKGFTQTEGIDYFE 380

Query: 518  TFSPVANITTVRLIIAVAAAS*WFLHQLDVNNAFLHGDLNEEVYMIPPPGYCAENDKRVC 697
            TFSPVA IT++R ++A+A++  WF+HQLD++NAFLHGDL+EEVYM PP G    + K VC
Sbjct: 381  TFSPVAKITSIRFLLALASSHNWFIHQLDIDNAFLHGDLDEEVYMRPPQGLRLPSSKLVC 440

Query: 698  KLIKSLYGLKQASRQWFQKLTSCLLTYGFQQSRSDSSLFIKSNSKHITVLCVYVDDIILA 877
            KL KSLYGLKQASR W QKLTS L   G++QS +D SLF+      IT+L +YVDDI+L+
Sbjct: 441  KLEKSLYGLKQASRNWNQKLTSELTLMGYKQSFADHSLFVNFTGSSITILLIYVDDIVLS 500

Query: 878  GNNMFEINNIKQHLDDQFTIKDLGTLKYILGIEIARSSKGIHLCQRKYALDLLTETGLLG 1057
            GN+M EI  +K HL ++F IKDLG+LK+ LG+E+ARS KGI L QRKY L+L+ ETGLLG
Sbjct: 501  GNDMTEIKKVKAHLHNKFHIKDLGSLKFFLGLEVARSKKGILLNQRKYCLELIDETGLLG 560

Query: 1058 CKPTSTPMDSKFDPQTAANTPLTDPSQYRRLIGRMLYLTITRPELSYSIHTLSQFLSKPT 1237
            CKP  TP D            L DP+ +RRLIGR+LYLT TRP++S+S+  LSQF+SKP 
Sbjct: 561  CKPAPTPADPAMKLHVDHGDLLHDPTVFRRLIGRLLYLTNTRPDISFSVQQLSQFVSKPR 620

Query: 1238 VAHLTAAHRVLRYIKNNPGKGIFYSSNSELHLKGFTDADWAKCPDTRRSISGYAVFLGNS 1417
              H+ AA R++RY+K  PG G+FYSS + L ++ F+D+DWA C  TRRS++GY VF+GNS
Sbjct: 621  EPHMQAALRIVRYLKGAPGLGLFYSSTNPLKIQAFSDSDWATCATTRRSVTGYCVFIGNS 680

Query: 1418 LISWKTKKQPTISRSSAEAEYRAIALITCELQWLTYLLQDLKIPHRQPALVYTDSKSAYC 1597
            LISWK+KKQ T+SRSS+EAEYRA+A +TCELQWL YL   + I    P   ++DS+SA  
Sbjct: 681  LISWKSKKQSTVSRSSSEAEYRALASLTCELQWLKYLCDSMHIKIPTPFATFSDSQSAIQ 740

Query: 1598 ISQNACNHERTKHIQLDCHFVREKLQEGLLKLIFLPSAQQTADIFTKPLPPQLFNHFTDK 1777
            IS+N   HERTKHI++DCH +R K+QEGLL LI + SA Q AD FTK L P+ F+    K
Sbjct: 741  ISKNPTFHERTKHIEVDCHLIRIKIQEGLLHLIHVLSANQLADAFTKALFPKPFHTAISK 800

Query: 1778 LSMLDIHAP 1804
            L +L+I+ P
Sbjct: 801  LGLLNIYHP 809