BLASTX nr result

ID: Rehmannia27_contig00055428 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00055428
         (449 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353...    58   4e-07
ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307...    55   5e-06
ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr...    52   6e-06

>ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353242 [Fragaria vesca
            subsp. vesca]
          Length = 1179

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
 Frame = +1

Query: 277  YVISQMNFVISPIYRQGNRVADQLSK---YSGGSSWWDAPPEDIISFLTDDYVGRAQYRF 447
            Y+ISQMNF  S I+R+GNRV D L+     S G  WWD PP  +IS   +D +G   +RF
Sbjct: 1119 YLISQMNFHSSHIFREGNRVVDALANERTKSSGLMWWDLPPTFVISLYNNDGLGLPTFRF 1178


>ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307646 [Fragaria vesca
           subsp. vesca]
          Length = 796

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = +1

Query: 277 YVISQMNFVISPIYRQGNRVADQLSKYSGGSS---WWDAPPEDIISFLTDDYVGRAQYRF 447
           Y IS M F  S I+R+GNRVAD L+ +    S   WWD PP  I+S+   D +G   +RF
Sbjct: 736 YRISTMTFKSSHIFREGNRVADALANHGTSMSEEVWWDVPPSFILSYYERDLLGMPNFRF 795


>ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292292|gb|AGU16584.1| hypothetical
           protein Salmi_Mp055 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 119

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 23/57 (40%), Positives = 37/57 (64%)
 Frame = +1

Query: 277 YVISQMNFVISPIYRQGNRVADQLSKYSGGSSWWDAPPEDIISFLTDDYVGRAQYRF 447
           ++I QMN V++ I+R+GN VAD L+  +G   WW++ P+ I S +  D  G + +RF
Sbjct: 60  HLIRQMNIVVTHIFREGNHVADALANAAGDLKWWNSMPDFISSAVYRDIAGVSFFRF 116


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