BLASTX nr result
ID: Rehmannia27_contig00055151
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00055151
(413 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1] 95 4e-20
gb|AGC25938.1| hypothetical protein, partial [Piper DNA virus 2] 73 6e-13
ref|YP_233107.1| polyprotein [Banana streak GF virus] gi|4045727... 60 7e-08
gb|AHM92951.1| polyprotein [Banana streak GF virus] 60 7e-08
gb|ABY53447.1| polyprotein [Ambrosia asymptomatic virus 2 UKM-2007] 55 3e-07
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata] 57 5e-07
gb|AHM92963.1| polyprotein [Banana streak CA virus] 57 5e-07
ref|YP_004442824.1| polyprotein [Banana streak UA virus] gi|3310... 57 5e-07
gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus] 57 6e-07
ref|YP_004442836.1| polyprotein [Banana streak CA virus] gi|3310... 57 6e-07
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] g... 57 7e-07
gb|AIK01816.1| ORF3 [Piper yellow mottle virus] 57 9e-07
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 57 9e-07
gb|AET09699.1| putative coat protein [Citrus yellow mosaic virus] 55 1e-06
ref|YP_009229919.1| polyprotein [Blackberry Virus F] gi|68925398... 56 2e-06
gb|AIK01824.1| ORF3 [Piper yellow mottle virus] 55 2e-06
gb|AIK01820.1| ORF3 [Piper yellow mottle virus] 55 2e-06
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 55 2e-06
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 55 3e-06
gb|ACZ02408.1| polyprotein [Sugarcane bacilliform virus] 55 3e-06
>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
Length = 2027
Score = 94.7 bits (234), Expect = 4e-20
Identities = 46/102 (45%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAGIYFDEEMANRYLLRLPGTLGKEIESGW-KSMNY 204
LEQ TI+ D IV FSND++SL + AG FD+ + ++Y ++LPG LG++I W +S
Sbjct: 345 LEQLTIRSFDYIVPFSNDFVSLIAAAGKAFDDILCDKYFVKLPGDLGRQIHDKWVESYKD 404
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNVL 78
GLG+G R+ +TF L +C EI+ Q++IK+ SY FC+N +
Sbjct: 405 SPGLGIGPRVQFTFLYLTERCKEIVLQEQIKRHSYNFCRNAI 446
>gb|AGC25938.1| hypothetical protein, partial [Piper DNA virus 2]
Length = 283
Score = 73.2 bits (178), Expect = 6e-13
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAGIYFDEEMANRYLLRLPGTLGKEIESGWKSMN-Y 204
LEQ TIQ + IV FSND++SL + +G FDEE+ N+Y +LPG LGK+I W + +
Sbjct: 209 LEQLTIQNFEYIVQFSNDFVSLIATSGKAFDEELCNKYFAKLPGELGKQITDTWNEKHGH 268
Query: 203 PIGLGVGARIIYTF 162
GLG+G RI +TF
Sbjct: 269 FQGLGIGPRIQFTF 282
>ref|YP_233107.1| polyprotein [Banana streak GF virus] gi|40457271|gb|AAR86692.1|
polyprotein III [Banana streak GF virus]
Length = 1832
Score = 59.7 bits (143), Expect = 7e-08
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = -1
Query: 347 IVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNYPIGLGVGARII 171
+ + NDY L SK+G ++ +EE++ + +LP LG ++E +K + +GV ARI
Sbjct: 612 VYRYMNDYFHLASKSGRMWANEELSTEFFTKLPRHLGDKVEKAFKERHPTNSIGVTARIA 671
Query: 170 YTFERLKGKCSEIIQQKEIKKQSYAFCKN 84
+T LK C E + Q ++KK + FC N
Sbjct: 672 FTRNYLKDMCQEALFQSQLKKMN--FCGN 698
>gb|AHM92951.1| polyprotein [Banana streak GF virus]
Length = 1832
Score = 59.7 bits (143), Expect = 7e-08
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = -1
Query: 347 IVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNYPIGLGVGARII 171
+ + NDY L SK+G ++ +EE++ + +LP LG ++E +K + +GV ARI
Sbjct: 612 VYRYMNDYFHLASKSGRMWANEELSTEFFTKLPRHLGDKVEKAFKERHPTNSIGVTARIA 671
Query: 170 YTFERLKGKCSEIIQQKEIKKQSYAFCKN 84
+T LK C E + Q ++KK + FC N
Sbjct: 672 FTRNYLKDMCQEALFQSQLKKMN--FCGN 698
>gb|ABY53447.1| polyprotein [Ambrosia asymptomatic virus 2 UKM-2007]
Length = 124
Score = 55.1 bits (131), Expect = 3e-07
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = -1
Query: 410 PTRRSSDLGALEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKE 234
P + +E+ + + ++ N+ ND+ L +K G +Y E++ + +LP +GKE
Sbjct: 4 PDEQERAYNDIERLSCENIKDVWNYLNDFKGLAAKTGRLYISTELSEKAFRKLPPAIGKE 63
Query: 233 IESGWKSMNYPIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
IE+ W + V RI +T++ L C + QKE++ S FC V
Sbjct: 64 IENAWNEKFPGSNVSVIPRIHFTYQYLAEICRKAAIQKEVRNLS--FCSKV 112
>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
Length = 1257
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/101 (26%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LE+ ++ +I+ F N+YM + +K G ++ E++ ++ ++LPG LGK I+ ++ +
Sbjct: 147 LERIACKDVQSIIPFMNEYMRIAAKTGRLFISSELSEKFWMKLPGDLGKVIKEQFEKTHV 206
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
+GV RI++T++ L+ +C + + +K + FC +
Sbjct: 207 GNTIGVHPRILFTYKYLQEECKKAALARSLK--NLQFCSKI 245
>gb|AHM92963.1| polyprotein [Banana streak CA virus]
Length = 1838
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = -1
Query: 347 IVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNYPIGLGVGARII 171
I + NDY L++K G + EE++ + +LP LG E+E +K + +GV ARI
Sbjct: 603 IYRYMNDYFHLSAKTGRAWASEELSKEFFTKLPRGLGDEVEKAFKEKHPSNTIGVTARIT 662
Query: 170 YTFERLKGKCSEIIQQKEIKKQSYAFCKN 84
+T LK C ++ QK I K FC+N
Sbjct: 663 FTKRYLKELCEKVALQKSIGKMD--FCRN 689
>ref|YP_004442824.1| polyprotein [Banana streak UA virus] gi|331029450|gb|AEC49874.1|
polyprotein [Banana streak UA virus]
Length = 1878
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -1
Query: 347 IVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNYPIGLGVGARII 171
I + NDY L +K+G + +EE++ + +LP LG IE +K + +GV ARI
Sbjct: 600 IYRYMNDYFHLAAKSGRAWANEELSQEFFTKLPRGLGDRIEKAFKEKHPSNTIGVAARIT 659
Query: 170 YTFERLKGKCSEIIQQKEIKKQSYAFCKN 84
+T +K C E + Q ++KK FC+N
Sbjct: 660 FTKNYMKEICQEAVFQNQLKK--LGFCRN 686
>gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus]
Length = 1295
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/101 (26%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LE+ + ++ +I+ F N+YM + +K G ++ E++ ++ ++LPG LGK I+ +
Sbjct: 783 LERISCKDVQDIIPFMNEYMRIAAKTGRLFISSELSEKFWMKLPGDLGKTIKDSFDKTYV 842
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
+GV RI++T++ L+ +C + + +K + FC +
Sbjct: 843 GNTVGVHPRILFTYKYLQEECKKAALSRSLK--NLQFCSKI 881
>ref|YP_004442836.1| polyprotein [Banana streak CA virus] gi|331029467|gb|AEC49887.1|
polyprotein [Banana streak CA virus]
Length = 1836
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = -1
Query: 347 IVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNYPIGLGVGARII 171
I + NDY L++K G + EE++ + +LP LG E+E +K + +GV ARI
Sbjct: 601 IYRYMNDYFHLSAKTGRAWATEELSKEFFTKLPRGLGDEVEKAFKEKHPSNTIGVTARIT 660
Query: 170 YTFERLKGKCSEIIQQKEIKKQSYAFCKN 84
+T LK C ++ QK I K FC+N
Sbjct: 661 FTKRYLKELCEKVALQKSIGKMD--FCRN 687
>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
gi|113901272|gb|ABI47983.1| ORF3 protein [Dioscorea
bacilliform virus]
Length = 1887
Score = 57.0 bits (136), Expect = 7e-07
Identities = 27/101 (26%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LE+ + ++ +I+ F N+YM + +K G ++ E++ ++ ++LPG LGK I+ +
Sbjct: 783 LERISCKDVQDIIPFMNEYMRIAAKTGRLFISSELSEKFWMKLPGDLGKTIKDSFDKTYV 842
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
+GV RI++T++ L+ +C + + +K + FC +
Sbjct: 843 GNTVGVHPRILFTYKYLQEECKKAALSRSLK--NLQFCSKI 881
>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 56.6 bits (135), Expect = 9e-07
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LEQ T ++V F NDY+ L +K G ++ E++ + ++LPG LG+ I+ + +
Sbjct: 751 LEQLTCSNIKDLVPFLNDYLRLAAKTGRMFLGTELSEKLWMKLPGNLGRRIKEAFDNKYK 810
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
GV RI++T + L+ +C E Q+ +K FC ++
Sbjct: 811 GNEAGVIPRILFTHKYLEDQCKEAAFQRSLK--GMTFCNSI 849
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 56.6 bits (135), Expect = 9e-07
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LEQ T ++V F NDY+ L +K G ++ E++ + ++LPG LG+ I+ + +
Sbjct: 751 LEQLTCSNIKDLVPFLNDYLRLAAKTGRMFLGTELSEKLWMKLPGNLGRRIKEAFDNKYK 810
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
GV RI++T + L+ +C E Q+ +K FC ++
Sbjct: 811 GNEAGVIPRILFTHKYLEDQCKEAAFQRSLK--GMTFCNSI 849
>gb|AET09699.1| putative coat protein [Citrus yellow mosaic virus]
Length = 214
Score = 55.1 bits (131), Expect = 1e-06
Identities = 27/101 (26%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LE+ T +IV + ND+M + +K G ++ E++ + L++PG LG+ ++ ++ +
Sbjct: 47 LERLTCDSVKHIVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKHP 106
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
+GV RI++ ++ L+G+C + ++ +K S FC ++
Sbjct: 107 GNIVGVCPRILFAYKYLEGECKDAAFRRSLKNLS--FCSSI 145
>ref|YP_009229919.1| polyprotein [Blackberry Virus F] gi|689253981|gb|AHX37579.1|
polyprotein [Blackberry Virus F]
Length = 1948
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/100 (30%), Positives = 51/100 (51%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAGIYFDEEMANRYLLRLPGTLGKEIESGWKSMNYP 201
LE+ T + +I + ND+ +L +K+G + E + + ++P +G+E+E W
Sbjct: 727 LERLTCESTRDIWRYLNDFKTLAAKSGRIYFPETSEKLFRKMPPLIGEEVEKAWNEKYPG 786
Query: 200 IGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
V RI +T++ L C + Q+EIK S FCK V
Sbjct: 787 AAAAVIPRIYFTYQYLSKMCKQAALQREIKDLS--FCKEV 824
>gb|AIK01824.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LEQ T ++V F NDY+ L +K G ++ E++ + ++LPG LG+ I+ +
Sbjct: 752 LEQLTCSNLKDLVPFLNDYLRLAAKTGRMFIGTELSEKLWMKLPGNLGRRIKEAFDIKYK 811
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
GV RI++T + L+ +C E Q+ +K FC ++
Sbjct: 812 GNEAGVIPRILFTHKYLEDQCKEAAFQRSLK--GMTFCNSI 850
>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LEQ T ++V F NDY+ L +K G ++ E++ + ++LPG LG+ I+ +
Sbjct: 752 LEQLTCSNLKDLVPFLNDYLRLAAKTGRMFIGTELSEKLWMKLPGNLGRRIKEAFDIKYK 811
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
GV RI++T + L+ +C E Q+ +K FC ++
Sbjct: 812 GNEAGVIPRILFTHKYLEDQCKEAAFQRSLK--GMTFCNSI 850
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 55.5 bits (132), Expect = 2e-06
Identities = 27/101 (26%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LE+ T +IV + ND+M + +K G ++ E++ + L++PG LG+ ++ ++ +
Sbjct: 769 LERLTCDSVKHIVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKHP 828
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
+GV RI++ ++ L+G+C + ++ +K S FC ++
Sbjct: 829 GNIIGVCPRILFAYKYLEGECKDAAFRRSLKNLS--FCSSI 867
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 55.1 bits (131), Expect = 3e-06
Identities = 27/101 (26%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = -1
Query: 380 LEQTTIQE*DNIVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNY 204
LE+ T +IV + ND+M + +K G ++ E++ + L++PG LG+ ++ ++ +
Sbjct: 292 LERLTCDSVKHIVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKHP 351
Query: 203 PIGLGVGARIIYTFERLKGKCSEIIQQKEIKKQSYAFCKNV 81
+GV RI++ ++ L+G+C + ++ +K S FC ++
Sbjct: 352 GNIVGVCPRILFAYKYLEGECKDAAFRRSLKNLS--FCSSI 390
>gb|ACZ02408.1| polyprotein [Sugarcane bacilliform virus]
Length = 1786
Score = 55.1 bits (131), Expect = 3e-06
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = -1
Query: 347 IVNFSNDYMSLTSKAG-IYFDEEMANRYLLRLPGTLGKEIESGWKSMNYPIGLGVGARII 171
I + NDY L++K G + EE++ + +LP LG +E +K + +G+ ARI
Sbjct: 607 IYRYMNDYFHLSAKTGRAWASEELSKEFFTKLPRGLGDAVEKAFKEKHPSNTVGIAARIT 666
Query: 170 YTFERLKGKCSEIIQQKEIKKQSYAFCKN 84
+T LK C ++ QK I K FC+N
Sbjct: 667 FTKRYLKELCEKVALQKSIGKMD--FCRN 693