BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00054164
         (620 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP44486.1| Retrovirus-related Pol polyprotein from transposo...   213   1e-63
ref|XP_015961210.1| PREDICTED: transcription factor SPT20 homolo...   212   2e-63
gb|KYP44480.1| Retrovirus-related Pol polyprotein from transposo...   213   3e-63
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]   214   3e-61
gb|KYP47920.1| Retrovirus-related Pol polyprotein from transposo...   196   1e-60
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   213   1e-60
gb|KYP44095.1| Retrovirus-related Pol polyprotein from transposo...   197   3e-60
gb|KYP63800.1| Retrovirus-related Pol polyprotein from transposo...   205   3e-60
gb|KYP64927.1| Retrovirus-related Pol polyprotein from transposo...   202   1e-59
gb|KYP75927.1| Retrovirus-related Pol polyprotein from transposo...   193   1e-59
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   209   4e-59
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   202   5e-59
emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]   208   9e-59
gb|KYP32604.1| Retrovirus-related Pol polyprotein from transposo...   194   1e-58
gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo...   194   2e-58
gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposo...   191   1e-57
gb|KYP32602.1| Retrovirus-related Pol polyprotein from transposo...   194   1e-57
gb|KYP50571.1| Retrovirus-related Pol polyprotein from transposo...   198   2e-57
ref|XP_012441791.1| PREDICTED: uncharacterized protein LOC105766...   204   3e-57
gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposo...   191   4e-57

>gb|KYP44486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 513

 Score =  213 bits (543), Expect = 1e-63
 Identities = 101/164 (61%), Positives = 131/164 (79%), Gaps = 7/164 (4%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYD---TEVKL----LSEPASIQEALTIPEWQAAMRDEYDALLKNRT 374
           MITR+KAGI+KPK Y+   T  KL      EP SI+EA+ IP W+  M +EY AL+KN T
Sbjct: 1   MITRAKAGIHKPKAYNIVTTTPKLDLNPFHEPRSIKEAMAIPHWKKTMLEEYKALMKNNT 60

Query: 373 WTLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPS 194
           W L+TLPA + +IGC+WVFK KTN+DGS++++KARLVAKG+ Q  GFDF+ETFS VVKP+
Sbjct: 61  WILTTLPAGRNLIGCRWVFKVKTNSDGSINRHKARLVAKGFHQRDGFDFSETFSPVVKPA 120

Query: 193 TIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQ 62
           TIR++LS+ +S+SW MRQ+D+ NAFLNG+L+ DIYM+QPPGF Q
Sbjct: 121 TIRIILSIVVSRSWDMRQIDIANAFLNGDLQEDIYMAQPPGFIQ 164


>ref|XP_015961210.1| PREDICTED: transcription factor SPT20 homolog [Arachis duranensis]
          Length = 458

 Score =  212 bits (539), Expect = 2e-63
 Identities = 99/159 (62%), Positives = 131/159 (82%)
 Frame = -2

Query: 538 HPMITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLST 359
           H MITRSK GI+KP+V+   V    EP ++Q+AL  PEW+AAM  EY+ALLKN+TW L T
Sbjct: 287 HSMITRSKVGIFKPRVFLASV----EPRNVQQALQTPEWKAAMDLEYEALLKNKTWELVT 342

Query: 358 LPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVV 179
           LP +++ IG KWVF+ K N+DGSL KYKARLVA+GY+Q PGFDFTET+S VVKP++IR++
Sbjct: 343 LPPNRKAIGSKWVFRIKYNSDGSLQKYKARLVAQGYSQRPGFDFTETYSPVVKPTSIRIL 402

Query: 178 LSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQ 62
           LS++L+KSWT+RQLDV+NAFL+G+L  ++YM QP G+E+
Sbjct: 403 LSISLAKSWTIRQLDVNNAFLHGDLVEEVYMKQPKGYEK 441


>gb|KYP44480.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 552

 Score =  213 bits (543), Expect = 3e-63
 Identities = 101/164 (61%), Positives = 131/164 (79%), Gaps = 7/164 (4%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYD---TEVKL----LSEPASIQEALTIPEWQAAMRDEYDALLKNRT 374
           MITR+KAGI+KPK Y+   T  KL      EP SI+EA+ IP W+  M +EY AL+KN T
Sbjct: 1   MITRAKAGIHKPKAYNIVTTTPKLDLNPFHEPRSIKEAMAIPHWKKTMLEEYKALMKNNT 60

Query: 373 WTLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPS 194
           W L+TLPA + +IGC+WVFK KTN+DGS++++KARLVAKG+ Q  GFDF+ETFS VVKP+
Sbjct: 61  WILTTLPAGRNLIGCRWVFKVKTNSDGSINRHKARLVAKGFHQRDGFDFSETFSPVVKPA 120

Query: 193 TIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQ 62
           TIR++LS+ +S+SW MRQ+D+ NAFLNG+L+ DIYM+QPPGF Q
Sbjct: 121 TIRIILSIVVSRSWDMRQIDIANAFLNGDLQEDIYMAQPPGFIQ 164


>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
          Length = 955

 Score =  214 bits (545), Expect = 3e-61
 Identities = 102/178 (57%), Positives = 137/178 (76%)
 Frame = -2

Query: 598  ENGHNLERTSETLSQQIAGNHPMITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQ 419
            E   ++     TL QQ    H M+TRSK GI+KPKVY  ++ +  EP + QEA++ P+W+
Sbjct: 496  EPNESINTRPVTLPQQ---PHHMVTRSKNGIFKPKVYTVDLNV-EEPNTFQEAISHPKWK 551

Query: 418  AAMRDEYDALLKNRTWTLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSP 239
             AM +E+ AL+KN+TW+L +LP ++  +GC+WVFK K N DGS+S+YKARLVAKGY+Q P
Sbjct: 552  EAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVP 611

Query: 238  GFDFTETFSAVVKPSTIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE 65
            GFDF ETFS VVKP+TIRVVL + +S+SW +RQLDV+NAFLNGEL+ ++YM QPPGF+
Sbjct: 612  GFDFYETFSXVVKPTTIRVVLXIVVSQSWFIRQLDVNNAFLNGELQEEVYMDQPPGFD 669


>gb|KYP47920.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 198

 Score =  196 bits (499), Expect = 1e-60
 Identities = 92/161 (57%), Positives = 120/161 (74%), Gaps = 6/161 (3%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKL------LSEPASIQEALTIPEWQAAMRDEYDALLKNRTW 371
           MITRSK GI+KPK Y+             EP +I+EAL IP W+ AM  EY+AL+ N+TW
Sbjct: 1   MITRSKHGIFKPKSYEVTTPTQKLHDTFKEPKTIKEALAIPNWKQAMDQEYNALIHNKTW 60

Query: 370 TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 191
            L+ LPA   ++GCKW+FK KTNADG+++++KARLVAKG+ Q  G DFTE FS VVK  T
Sbjct: 61  VLTNLPAGANLVGCKWIFKVKTNADGTINRHKARLVAKGFNQQSGLDFTEMFSPVVKLVT 120

Query: 190 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGF 68
           IR VL++ALS +W++RQ+D+ NAFLNG+L+  IYM+QPPGF
Sbjct: 121 IRTVLTIALSLNWSLRQIDIANAFLNGDLQETIYMTQPPGF 161


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  213 bits (543), Expect = 1e-60
 Identities = 97/158 (61%), Positives = 131/158 (82%)
 Frame = -2

Query: 538  HPMITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLST 359
            H M+TRSK GI+KP VY  ++ +  EP + QEA++ P+W+ AM +E+ AL+KN+TW+L +
Sbjct: 722  HHMVTRSKNGIFKPXVYTVDLNV-EEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVS 780

Query: 358  LPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVV 179
            LP ++  +GC+WVFK K N DGS+S+YKARLVAKGY+Q PGFDF ETFS VVKP+TIRVV
Sbjct: 781  LPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVV 840

Query: 178  LSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE 65
            L++A+S+SW +RQLDV+NAFLNGEL+ ++YM QPPGF+
Sbjct: 841  LAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFD 878


>gb|KYP44095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 242

 Score =  197 bits (500), Expect = 3e-60
 Identities = 94/171 (54%), Positives = 124/171 (72%), Gaps = 6/171 (3%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLS-----EPASIQEALTIPEWQAAMRDEYDALLKNRTWT 368
           M TRSKAGI+KPK Y   +   S     EP +++EAL  PEW  AM+DEY AL+ N+TW+
Sbjct: 1   MTTRSKAGIFKPKTYAAALVKSSYDHTIEPNTVKEALAKPEWLKAMKDEYQALVSNQTWS 60

Query: 367 LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 188
           L  LP   + IGCKW+FK+K N DGS  ++KARLVAKGY Q PG DF+ETFS VVKP+T+
Sbjct: 61  LVDLPIGYKPIGCKWIFKSKYNPDGSFQRHKARLVAKGYNQKPGLDFSETFSPVVKPTTV 120

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE-QFPEKTISL 38
           R+VLS+A++  W + Q+D++NAFL+G+L+  +YMSQPPGF  Q  +K   L
Sbjct: 121 RIVLSLAITNQWPIHQIDINNAFLHGDLQESVYMSQPPGFNTQHKDKVCKL 171


>gb|KYP63800.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 540

 Score =  205 bits (522), Expect = 3e-60
 Identities = 98/176 (55%), Positives = 129/176 (73%), Gaps = 5/176 (2%)
 Frame = -2

Query: 577 RTSETLSQQIAGNHPMITRSKAGIYKPKVYDTEVKL-----LSEPASIQEALTIPEWQAA 413
           R S T+ Q     H M TR+KAGI++PK+Y  +          EP +++EAL+ PEW  A
Sbjct: 177 RISSTVLQSRTKAHSMTTRAKAGIFRPKIYTAKAAAHIYDSTIEPHTVKEALSKPEWCQA 236

Query: 412 MRDEYDALLKNRTWTLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGF 233
           M++EY+AL+KN TWTL  LP     IGCKWVFK+K NADGS  K+KARL+AKGY Q  GF
Sbjct: 237 MKEEYEALIKNNTWTLVDLPPGCNAIGCKWVFKSKFNADGSFHKHKARLIAKGYHQRAGF 296

Query: 232 DFTETFSAVVKPSTIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE 65
           DFT+TFS +VKP+T+RVVL++ALSK W M Q+D++NAFL+G L+  +YM+QPPGF+
Sbjct: 297 DFTDTFSPMVKPTTVRVVLTLALSKQWHMHQIDINNAFLHGTLKEIVYMNQPPGFD 352


>gb|KYP64927.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 470

 Score =  202 bits (514), Expect = 1e-59
 Identities = 96/163 (58%), Positives = 124/163 (76%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLSTLP 353
           M TRSK+GI+KPK Y + +   SEP ++++AL  P+W  AM+ EY ALLKN TWTL  LP
Sbjct: 1   MQTRSKSGIHKPK-YPSVLLAQSEPKNVKQALKDPKWLEAMKKEYSALLKNNTWTLVQLP 59

Query: 352 ADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVVLS 173
            D+  IGCKWVF+ K N+DGS+++YKARLVAKG+ Q PGFDF ETFS V+KP TIR++L+
Sbjct: 60  PDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPVIKPVTIRLILT 119

Query: 172 VALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKTI 44
           +A+S  W + QLDV+NAFLNG L   +YM QPPGFE  P+ T+
Sbjct: 120 LAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFE-VPDSTL 161


>gb|KYP75927.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 186

 Score =  193 bits (491), Expect = 1e-59
 Identities = 96/160 (60%), Positives = 117/160 (73%), Gaps = 5/160 (3%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLS-----EPASIQEALTIPEWQAAMRDEYDALLKNRTWT 368
           MITR+KAGIYKPK Y T     +     EP S+ EAL+ P+W  AM+DEY AL KN TW 
Sbjct: 1   MITRAKAGIYKPKSYTTAASSKTYDHTIEPTSVNEALSKPKWYKAMQDEYLALQKNGTWN 60

Query: 367 LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 188
           L  LPA  + IGCKWVFK+K N DGS  ++KARLVAKGY Q  GFDF ETFS VVKP+T+
Sbjct: 61  LVDLPAGCRTIGCKWVFKSKHNVDGSFQRHKARLVAKGYHQREGFDFRETFSPVVKPTTV 120

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGF 68
           RVVL++AL K W + Q+D++NAFL+GEL   +YM+Q PGF
Sbjct: 121 RVVLNLALFKQWHIHQIDINNAFLHGELTGTVYMNQSPGF 160


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  209 bits (532), Expect = 4e-59
 Identities = 99/174 (56%), Positives = 132/174 (75%), Gaps = 2/174 (1%)
 Frame = -2

Query: 571  SETLSQQIAGNHPMITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDA 392
            + T+++     HPMITR+K+GI KPK++   +  + EP+S+  AL   EW+ AM  EYDA
Sbjct: 903  TRTIAKDADNTHPMITRAKSGIVKPKIF---IAAIREPSSVSAALQQDEWKKAMVAEYDA 959

Query: 391  LLKNRTWTLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFS 212
            L +N TW+L  LPA +Q IGCKWV+KTK N DG++ KYKARLVAKG+ Q  GFDFTETFS
Sbjct: 960  LQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFS 1019

Query: 211  AVVKPSTIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGF--EQFP 56
             VVKPST+RVV ++ALS++W ++QLDV+NAFLNG+L+ +++M QP GF  EQ P
Sbjct: 1020 PVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNP 1073


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 539

 Score =  202 bits (514), Expect = 5e-59
 Identities = 95/163 (58%), Positives = 124/163 (76%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLSTLP 353
           M TRSK+GI+KPK Y + +   SEP ++++AL  P+W  AM+ EY ALLKN TWTL  LP
Sbjct: 1   MQTRSKSGIHKPK-YPSVLLAQSEPKNVKQALKDPKWLEAMKQEYSALLKNNTWTLVQLP 59

Query: 352 ADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVVLS 173
            D+  IGCKWVF+ K N+DGS+++YKARLVAKG+ Q PGFDF ETFS ++KP TIR++L+
Sbjct: 60  PDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPIIKPVTIRLILT 119

Query: 172 VALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQFPEKTI 44
           +A+S  W + QLDV+NAFLNG L   +YM QPPGFE  P+ T+
Sbjct: 120 LAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFE-VPDSTL 161


>emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]
          Length = 1124

 Score =  208 bits (529), Expect = 9e-59
 Identities = 99/167 (59%), Positives = 134/167 (80%)
 Frame = -2

Query: 565 TLSQQIAGNHPMITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALL 386
           TL QQ    H M+TRSK GI+KPKVY  ++ +  EP + QE ++ P+W+ AM +E+ AL+
Sbjct: 469 TLPQQ---PHHMVTRSKNGIFKPKVYTIDLNV-EEPNTFQETISHPKWKEAMDEEFRALM 524

Query: 385 KNRTWTLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAV 206
           KN+TW+L +LP+++  +GCKWVFK K N DGS+S+YKARLVAKGY Q P FDF++TFS V
Sbjct: 525 KNKTWSLVSLPSNRTSVGCKWVFKLKRNPDGSVSRYKARLVAKGYFQVPSFDFSKTFSLV 584

Query: 205 VKPSTIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE 65
           VKP+TIRVVL+VA+S+SW++R LDV+NAFLNGEL+ ++YM Q PGF+
Sbjct: 585 VKPTTIRVVLAVAVSQSWSIRXLDVNNAFLNGELQEEVYMDQXPGFD 631


>gb|KYP32604.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 276

 Score =  194 bits (493), Expect = 1e-58
 Identities = 96/160 (60%), Positives = 117/160 (73%), Gaps = 5/160 (3%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLS-----EPASIQEALTIPEWQAAMRDEYDALLKNRTWT 368
           MITR+KA IYKPK Y       +     EP S++E L+ PEW  AM+DEY AL KN TW 
Sbjct: 1   MITRAKASIYKPKSYTAAASSKTYDHTIEPTSVKETLSKPEWYRAMQDEYLALQKNDTWN 60

Query: 367 LSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTI 188
           L  LPA  + IGCKWVFK+K NADGS  ++KARLVAKGY Q  GFDF ETFS VVKP+T+
Sbjct: 61  LVDLPAGCRTIGCKWVFKSKHNADGSFQRHKARLVAKGYHQREGFDFHETFSPVVKPTTV 120

Query: 187 RVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGF 68
           RVVL++AL K W + Q+D++NAFL+GEL   +YM+QPPGF
Sbjct: 121 RVVLNLALFKQWHIHQIDINNAFLHGELTETVYMNQPPGF 160


>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 293

 Score =  194 bits (492), Expect = 2e-58
 Identities = 87/156 (55%), Positives = 124/156 (79%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLSTLP 353
           M TRSK+GI +PK++ T +   +EP S+++AL+ P W+ AM  EYDAL+KN+TWTL  LP
Sbjct: 1   MQTRSKSGIVRPKLHPTLLLTTTEPTSLKQALSSPSWKTAMSLEYDALIKNQTWTLVPLP 60

Query: 352 ADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVVLS 173
           +++ V+GCKWV++ K N DG+++KYKARLVAKG+ Q  G D++ETFS V+KP TIRV+L+
Sbjct: 61  SNRTVVGCKWVYRIKENQDGTINKYKARLVAKGFHQKFGCDYSETFSPVIKPITIRVILT 120

Query: 172 VALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE 65
           + ++  W ++Q+D++NAFLNG LE D+YM QPPGFE
Sbjct: 121 LDVTYHWPIKQVDINNAFLNGFLEEDVYMMQPPGFE 156


>gb|KYP31309.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 274

 Score =  191 bits (486), Expect = 1e-57
 Identities = 88/156 (56%), Positives = 119/156 (76%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLSTLP 353
           M TRSK+G + P+++ +     SEP ++++AL  P W +AM+ EY+AL+ N TW L +LP
Sbjct: 1   MQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLP 60

Query: 352 ADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVVLS 173
           +D++ +GCKWVF+ K NADGS+ K KARLVAKG+ Q  GFDF ETFS V+KP TIR++L+
Sbjct: 61  SDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILT 120

Query: 172 VALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE 65
           +AL+ +W + QLDV+NAFLNG LE  IYM QPPGFE
Sbjct: 121 LALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFE 156


>gb|KYP32602.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 378

 Score =  194 bits (494), Expect = 1e-57
 Identities = 96/174 (55%), Positives = 123/174 (70%), Gaps = 5/174 (2%)
 Frame = -2

Query: 574 TSETLSQQIAGNHPMITRSKAGIYKPKVYDTEVKLLS-----EPASIQEALTIPEWQAAM 410
           T+ +  Q  +  HPMITR+KAGIY+PK Y       +     EP ++++AL+ PEW  AM
Sbjct: 89  TTGSSQQPPSNTHPMITRAKAGIYRPKSYTAAASSKTYDHTIEPTTVKKALSKPEWYKAM 148

Query: 409 RDEYDALLKNRTWTLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFD 230
           +DEY AL KN TW L  LP   + IGCKWVFK+K NADGS  ++KARLVAKGY Q  GFD
Sbjct: 149 QDEYLALHKNGTWNLVDLPVGCRTIGCKWVFKSKHNADGSFQRHKARLVAKGYHQRAGFD 208

Query: 229 FTETFSAVVKPSTIRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGF 68
           F ETFS VVKP+ +RVVL++AL K W + Q+D++NAFL+GEL   +YM+QP GF
Sbjct: 209 FHETFSPVVKPTIVRVVLNLALFKQWHIHQIDINNAFLHGELTETVYMNQPTGF 262


>gb|KYP50571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 553

 Score =  198 bits (504), Expect = 2e-57
 Identities = 92/161 (57%), Positives = 120/161 (74%), Gaps = 6/161 (3%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKL------LSEPASIQEALTIPEWQAAMRDEYDALLKNRTW 371
           MITRSK GI+KPK Y+             EP +I+EAL IP W+ AM  EY+AL+ N+TW
Sbjct: 1   MITRSKHGIFKPKTYEVTTPTQKLHDPFKEPKTIKEALAIPNWKQAMDQEYNALIHNKTW 60

Query: 370 TLSTLPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPST 191
            L+ LP    ++GCKW+FK KTNADG+++++KARL+AKG+ Q  G DFTETF  VVKP T
Sbjct: 61  VLTHLPVGANLVGCKWIFKVKTNADGTINRHKARLMAKGFNQQSGLDFTETFIPVVKPIT 120

Query: 190 IRVVLSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGF 68
           IR VL++ALS +W++RQLD+ NAFLNG+L+  IYM+QPPGF
Sbjct: 121 IRTVLTIALSLNWSLRQLDIANAFLNGDLQETIYMAQPPGF 161


>ref|XP_012441791.1| PREDICTED: uncharacterized protein LOC105766761 [Gossypium raimondii]
          Length = 1814

 Score =  204 bits (518), Expect = 3e-57
 Identities = 94/159 (59%), Positives = 127/159 (79%)
 Frame = -2

Query: 538  HPMITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLST 359
            HPM TRSKAGI+KPKV   EV   SEP++I+EA   PEWQ A + EYDAL++N TW L +
Sbjct: 903  HPMTTRSKAGIFKPKVLAVEV---SEPSTIEEAFASPEWQTAAQAEYDALIRNGTWELVS 959

Query: 358  LPADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVV 179
            +P+ ++VIGCKW+FK K N DG++ + KARLVAKG +Q PG DF ETFS VVKP+TIRV+
Sbjct: 960  MPSGRKVIGCKWLFKVKKNPDGTVERCKARLVAKGCSQVPGCDFQETFSPVVKPATIRVI 1019

Query: 178  LSVALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFEQ 62
            LS+A++K W++RQ+DV+NAFLNG+++ +++M QP G+ Q
Sbjct: 1020 LSIAVTKGWSLRQVDVNNAFLNGDIDREVFMQQPLGYVQ 1058


>gb|KYP70746.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 324

 Score =  191 bits (486), Expect = 4e-57
 Identities = 88/156 (56%), Positives = 119/156 (76%)
 Frame = -2

Query: 532 MITRSKAGIYKPKVYDTEVKLLSEPASIQEALTIPEWQAAMRDEYDALLKNRTWTLSTLP 353
           M TRSK+G + P+++ +     SEP ++++AL  P W +AM+ EY+AL+ N TW L +LP
Sbjct: 1   MQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLP 60

Query: 352 ADKQVIGCKWVFKTKTNADGSLSKYKARLVAKGYTQSPGFDFTETFSAVVKPSTIRVVLS 173
           +D++ +GCKWVF+ K NADGS+ K KARLVAKG+ Q  GFDF ETFS V+KP TIR++L+
Sbjct: 61  SDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILT 120

Query: 172 VALSKSWTMRQLDVDNAFLNGELETDIYMSQPPGFE 65
           +AL+ +W + QLDV+NAFLNG LE  IYM QPPGFE
Sbjct: 121 LALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFE 156