BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00053969
         (978 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013746037.1| PREDICTED: uncharacterized protein LOC106448...   437   e-141
ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448...   422   e-140
ref|XP_013694892.1| PREDICTED: uncharacterized protein LOC106398...   435   e-139
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The...   399   e-130
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par...   393   e-130
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun...   410   e-129
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun...   403   e-126
gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   388   e-126
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   387   e-125
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   396   e-124
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The...   393   e-123
ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, part...   376   e-122
ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The...   374   e-122
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   394   e-121
gb|KYP31454.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   378   e-120
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   389   e-120
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   387   e-120
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   385   e-119
ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, part...   362   e-119
ref|XP_014628670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   386   e-119

>ref|XP_013746037.1| PREDICTED: uncharacterized protein LOC106448737 [Brassica napus]
            gi|923808461|ref|XP_013690050.1| PREDICTED:
            uncharacterized protein LOC106393961 [Brassica napus]
          Length = 1236

 Score =  437 bits (1124), Expect = e-141
 Identities = 200/291 (68%), Positives = 242/291 (83%)
 Frame = +2

Query: 5    PFELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLF 184
            PFELHCDASK+G+GAVLSQ GRPVAF+SEKL G RSRYSTYD+EFYA+V+A++HWRHYL 
Sbjct: 935  PFELHCDASKLGVGAVLSQFGRPVAFYSEKLAGARSRYSTYDIEFYAIVQAIKHWRHYLA 994

Query: 185  HREFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSL 364
            H+EF+LFTDH +LK++  Q  +S+RHASW A+LQQFTFV++HKSG  N+VADALSRRH+L
Sbjct: 995  HKEFILFTDHAALKYLGTQDKISSRHASWTAYLQQFTFVIKHKSGKLNKVADALSRRHAL 1054

Query: 365  LTDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSSDFILSDGFLFRGTRLCIPVCSLR 544
            ++ +RVSV GF+    LYP+D +F+ +   + QG  SDF L DGF+F+  RLC+P CSLR
Sbjct: 1055 VSTLRVSVTGFECLSDLYPTDAFFSPIWMDLTQGVRSDFSLVDGFVFKDNRLCVPTCSLR 1114

Query: 545  NRLISELHGVGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGLYRP 724
             ++I ELHG GH+GRDRTL L+   +FWP+LRRDV +FV RC  CQ  KG ASNAGLY P
Sbjct: 1115 LQIIKELHGEGHIGRDRTLKLVAESYFWPTLRRDVERFVARCTSCQQGKGQASNAGLYLP 1174

Query: 725  LPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDA 877
            LPVP+ PW+ ISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFI CK+TTDA
Sbjct: 1175 LPVPTQPWSDISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIPCKKTTDA 1225


>ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448142 [Brassica napus]
          Length = 701

 Score =  422 bits (1084), Expect = e-140
 Identities = 202/325 (62%), Positives = 246/325 (75%)
 Frame = +2

Query: 2    VPFELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYL 181
            +PFELHCDASK+GIGAVLSQ GRPVA++SEK+ G R+RYSTYDV+FYA+V+AV+HWRHYL
Sbjct: 188  LPFELHCDASKLGIGAVLSQQGRPVAYYSEKMAGARARYSTYDVKFYAIVQAVKHWRHYL 247

Query: 182  FHREFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHS 361
             H+EFVLFTDH +L+++  Q  +S+RHASW A+LQQFTFV++H SG  N+VAD+LSRRH+
Sbjct: 248  AHKEFVLFTDHVALRYLGTQDKISSRHASWTAYLQQFTFVIKHPSGKLNKVADSLSRRHA 307

Query: 362  LLTDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSSDFILSDGFLFRGTRLCIPVCSL 541
            L++ +RVSV GF+    LYP+D +  +                                L
Sbjct: 308  LVSTLRVSVVGFECLAELYPTDAFSPR--------------------------------L 335

Query: 542  RNRLISELHGVGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGLYR 721
            R ++I ELH  GHVGRDRTL L+   ++WPSLRRDV +FV RC  CQ  KG  SNAGLY 
Sbjct: 336  RLQIIQELHKEGHVGRDRTLKLVADSYYWPSLRRDVERFVARCTTCQEGKGHVSNAGLYL 395

Query: 722  PLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQLFF 901
            PLP+P+ PW+ ISMDFVLGLPRTQRGHDSIFVVVDRFSKM HFI CK+TTDA+ VA LFF
Sbjct: 396  PLPIPTQPWSDISMDFVLGLPRTQRGHDSIFVVVDRFSKMTHFIPCKKTTDAVQVASLFF 455

Query: 902  REVYRLHGLPLSIVSDRDTRFLSHF 976
             E+YRLHGLP SIVSDRD+RF+SHF
Sbjct: 456  WEIYRLHGLPTSIVSDRDSRFISHF 480


>ref|XP_013694892.1| PREDICTED: uncharacterized protein LOC106398939 [Brassica napus]
          Length = 1353

 Score =  435 bits (1119), Expect = e-139
 Identities = 208/319 (65%), Positives = 252/319 (78%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FELHCDASK GIGAVLSQ+ +PVAFFSEK++G R RY TYDVE YAVV+AV+HWRHYLFH
Sbjct: 888  FELHCDASKSGIGAVLSQEKKPVAFFSEKISGSRERYRTYDVELYAVVQAVKHWRHYLFH 947

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            REFVL+TDHD+LKH+S+Q  V++RHASW ++LQQFTFV++HK+GA N+VADALSRRH+LL
Sbjct: 948  REFVLYTDHDALKHMSSQDKVTSRHASWFSYLQQFTFVIKHKAGALNKVADALSRRHTLL 1007

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSSDFILSDGFLFRGTRLCIPVCSLRN 547
              M VSV GF+T   LYP DP+F+K+   +Q   SS++++ DGFLFRG +LCIP  SLR 
Sbjct: 1008 ASMHVSVVGFETLPDLYPLDPFFSKIWNDLQLNRSSEYVIVDGFLFRGNKLCIPESSLRL 1067

Query: 548  RLISELHGVGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGLYRPL 727
            ++I E H  GHVGRDRTL L+   +FWPSLRRDV +F+ RC +CQ +KG ASNAGLY PL
Sbjct: 1068 QVIREFHNEGHVGRDRTLQLVTSSYFWPSLRRDVERFIVRCGICQASKGHASNAGLYLPL 1127

Query: 728  PVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQLFFRE 907
            P+PS PW  ISMDFVLGLPRTQRG DSIFVVVDRFSKM HF+ CK+TTDA+  + L   E
Sbjct: 1128 PIPSQPWTDISMDFVLGLPRTQRGFDSIFVVVDRFSKMVHFVPCKKTTDAVQDSVLCQAE 1187

Query: 908  VYRLHGLPLSIVSDRDTRF 964
                H +      +R TRF
Sbjct: 1188 FAHNHAV------NRSTRF 1200


>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 786

 Score =  399 bits (1026), Expect = e-130
 Identities = 189/329 (57%), Positives = 248/329 (75%), Gaps = 6/329 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            F + CDAS VGIGAVLSQDGRP+ FFSEKLT  R RYSTYD+EFYA+VRA+RHW+HYL +
Sbjct: 288  FVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAY 347

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            REF +++DH +L+++ +Q  +S +HA W++FL +F F L++KSG SN VADALSRR  +L
Sbjct: 348  REFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKML 407

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQ---QGTSSDFILSDGFLFRGTRLCIPVCS 538
            + M   V GF+  ++ Y SD YF+K++A +Q   Q  +  + L + +LF+G +LCIP  S
Sbjct: 408  SVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGS 467

Query: 539  LRNRLISELHGVG---HVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNA 709
            LR ++I ELHG G   H GRD+TL ++   ++WP +RRDV + V+RC  C   KG+A N 
Sbjct: 468  LREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNT 527

Query: 710  GLYRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVA 889
            GLY PLP P APW  +SMDFVLGLP+T +G DSIFVVVDRFSKMAHFI C RT++A H+A
Sbjct: 528  GLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSNATHIA 587

Query: 890  QLFFREVYRLHGLPLSIVSDRDTRFLSHF 976
            +LFFRE+ RLHG+P SIVSDRD +F+ HF
Sbjct: 588  ELFFREIVRLHGIPTSIVSDRDVKFMGHF 616


>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
            gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
            superfamily protein, partial [Theobroma cacao]
          Length = 624

 Score =  393 bits (1009), Expect = e-130
 Identities = 186/329 (56%), Positives = 244/329 (74%), Gaps = 6/329 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            F + CDAS VG    LSQDGRP+ FFSEKLT  R RYSTYD+EFYA+VRA+RHW+HYL +
Sbjct: 288  FVVECDASYVGXXXXLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAY 347

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            REF +++DH +L+++ +Q  +S +HA W++FL +F F L++KSG SN VADALSRR  +L
Sbjct: 348  REFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKML 407

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQ---QGTSSDFILSDGFLFRGTRLCIPVCS 538
            + M   V GF+  ++ Y SD YF+K++A +Q   Q  +  + L + +LF+G +LCIP  S
Sbjct: 408  SVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGS 467

Query: 539  LRNRLISELHGVG---HVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNA 709
            LR ++I ELHG G   H GRD+TL ++   ++WP +RRDV + V+RC  C   KG+A N 
Sbjct: 468  LREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNT 527

Query: 710  GLYRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVA 889
            GLY PLP P APW  +SMDFVLGLP+T +G DSIFVVVDRFSKMAHFI C RT+DA H+A
Sbjct: 528  GLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIA 587

Query: 890  QLFFREVYRLHGLPLSIVSDRDTRFLSHF 976
            +LFFRE+ RLHG+P SIVSDRD +F+ HF
Sbjct: 588  ELFFREIVRLHGIPTSIVSDRDVKFMGHF 616


>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
            gi|462405925|gb|EMJ11389.1| hypothetical protein
            PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  410 bits (1055), Expect = e-129
 Identities = 195/327 (59%), Positives = 248/327 (75%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE+ CDAS VG+GAVLSQD RPVAFFSEKL+  R ++STYD EFYAVVRA++ W HYL  
Sbjct: 921  FEVECDASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQ 980

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFVLFTDH +LK+I++Q N+   HA W  FLQ+F+FV++H SG +NRVADALSRR SLL
Sbjct: 981  KEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLL 1040

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLA-LVQQGTSSDFILSDGFLFRGTRLCIPVCSLR 544
              +   V GF+  + LY  D  F ++      Q   +D+ L++G+LF+G +LCIPV SLR
Sbjct: 1041 ITLTQEVVGFECLKELYEGDADFGEIWTKCTNQEPMADYFLNEGYLFKGNQLCIPVSSLR 1100

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
             +LI +LHG    GH+GRD+T+  ++  F+WP L+RDVG  V++C  CQ +KG   N GL
Sbjct: 1101 EKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGL 1160

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLPVP+  W  ++MDFVLGLPRTQRG DS+FVVVDRFSKMAHFIAC++T DA ++A+L
Sbjct: 1161 YMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACRKTADASNIAKL 1220

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            FFREV RLHG+P SI SDRDT+FLSHF
Sbjct: 1221 FFREVVRLHGVPTSITSDRDTKFLSHF 1247


>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
            gi|462402874|gb|EMJ08431.1| hypothetical protein
            PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  403 bits (1035), Expect = e-126
 Identities = 192/327 (58%), Positives = 244/327 (74%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE+ CDAS VG+GAVL QD RPVAFFSEKL+  R ++STYD EFYAVVRA++ W HYL  
Sbjct: 929  FEVECDASGVGVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQ 988

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFVLFTDH +LK+I++Q N+   HA W  FLQ+F+FV++H SG +NRVADALSRR SLL
Sbjct: 989  KEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLL 1048

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLA-LVQQGTSSDFILSDGFLFRGTRLCIPVCSLR 544
              +   V GF+  + LY  D  F ++      Q   +D+ L++G+LF+G +LCIPV SLR
Sbjct: 1049 ITLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMTDYFLTEGYLFKGNQLCIPVSSLR 1108

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
             +LI +LHG    GH+GRD+T+  ++  F+WP L+RDVG  V++C  CQ +KG   N GL
Sbjct: 1109 EKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGL 1168

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLPVP+  W  ++MDFVLG PRTQR  DS+FVV DRFSKMAHFIACK+T DA ++A+L
Sbjct: 1169 YMPLPVPNDIWQDLAMDFVLGFPRTQRRVDSVFVVADRFSKMAHFIACKKTADASNIAKL 1228

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            FFREV RLHG+P SI SDRDT+FLSHF
Sbjct: 1229 FFREVVRLHGVPTSITSDRDTKFLSHF 1255


>gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 797

 Score =  388 bits (997), Expect = e-126
 Identities = 184/326 (56%), Positives = 233/326 (71%), Gaps = 3/326 (0%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE+ CDAS VGIGAVL Q+G P+A+FSEKL G    Y TYD E YA+VRA+R W+HYL  
Sbjct: 245  FEIECDASNVGIGAVLMQEGHPIAYFSEKLNGAALNYPTYDKELYALVRALRTWQHYLLP 304

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SLK++  Q  ++ RHA W  FL+QF +V++HK G  N VADALSRRH+LL
Sbjct: 305  KEFVIHSDHESLKYLKGQGKLNKRHAKWVEFLEQFPYVIKHKKGKGNVVADALSRRHNLL 364

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSSDFILSDGFLFRGTRLCIPVCSLRN 547
            + +   + G ++ + +Y  D  FA+  A  ++ + + +   +GFLF+  RLC+P CS+R 
Sbjct: 365  SMLETKLFGLESLKDMYMHDVDFAENFAACEKFSENGYYRHNGFLFKANRLCVPKCSIRE 424

Query: 548  RLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGLY 718
             L+SE H    +GH G  +TL++LQ HF+WP ++ DV KF   C VC+ AK      GLY
Sbjct: 425  LLVSESHEGGLMGHFGVQKTLEILQEHFYWPHMKHDVHKFCDHCIVCKKAKSKVKPHGLY 484

Query: 719  RPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQLF 898
             PLPVP  PW  ISMDFVLGLPRT+ G DSIFVVVDRFSKMAHFI CK+  DA HVA LF
Sbjct: 485  TPLPVPDFPWIDISMDFVLGLPRTKNGKDSIFVVVDRFSKMAHFIPCKKVNDACHVADLF 544

Query: 899  FREVYRLHGLPLSIVSDRDTRFLSHF 976
            FREV RLHGLP SIVSDRDT+FLSHF
Sbjct: 545  FREVVRLHGLPRSIVSDRDTKFLSHF 570


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  387 bits (994), Expect = e-125
 Identities = 183/327 (55%), Positives = 239/327 (73%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FEL CDAS +G+G VL Q+G+PVA+FSEKL+GP   YSTYD E +A+VR +  W+HYL+ 
Sbjct: 355  FELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWP 414

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SLKHI +Q+ ++ RHA W  F++ F +V++HK G  N +ADALSRR+++L
Sbjct: 415  KEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAML 474

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQG-TSSDFILSDGFLFRGTRLCIPVCSLR 544
            + +   + G +T +  Y  D  F  VL    +G T + F+L++GF+FR  +LCIP  S+R
Sbjct: 475  SQLDFKIFGLETIKEQYAHDDDFKDVLLNCMEGRTWNKFVLTNGFVFRANKLCIPASSVR 534

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
              L+ E HG   +GH G  +T D+L  HFFWP +RRDV +FV RC  CQ AK   +  GL
Sbjct: 535  MLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGL 594

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLPVPS PW  ISMDFVLGLPRT++G DSIFVVVDRFSKMAHFI C ++ DA HVA L
Sbjct: 595  YMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADL 654

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            FFRE+ RLHG+P +IVSDRDT+FLSHF
Sbjct: 655  FFREIVRLHGVPNTIVSDRDTKFLSHF 681


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  396 bits (1018), Expect = e-124
 Identities = 190/322 (59%), Positives = 248/322 (77%), Gaps = 6/322 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE+ CDAS VGIGAVLSQ+G PVAFFSEKL G + +YSTYD+EFYAVV+A+RHW+HYL +
Sbjct: 918  FEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQHYLSY 977

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFVL++DH++L+++++Q  +++RHA W++FLQ FTF L+H +G  N+VADALSR+  LL
Sbjct: 978  KEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENKVADALSRKALLL 1037

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSS---DFILSDGFLFRGTRLCIPVCS 538
             +M  +  GF+  +  Y +D  F  V + +  G+ +   DF + +G+LF   RLC+P  S
Sbjct: 1038 VNMSTTTIGFEELKHCYDNDADFGDVYSSLLSGSKATCIDFQILEGYLFYKNRLCLPRTS 1097

Query: 539  LRNRLISELHGVG---HVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNA 709
            LR+ +I ELHG G   H GRD+T+ L++  FFWPSL++DV K +++CR CQV KG+  N 
Sbjct: 1098 LRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVGKGSKQNT 1157

Query: 710  GLYRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVA 889
            GLY PLPVPS PW  +SMDFVLGLPRTQRG DSIFVVVDRFSKMAHFI CK+ +DA +VA
Sbjct: 1158 GLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVA 1217

Query: 890  QLFFREVYRLHGLPLSIVSDRD 955
             LFF+EV RLHGLP SIVSDRD
Sbjct: 1218 ALFFKEVVRLHGLPQSIVSDRD 1239


>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  393 bits (1009), Expect = e-123
 Identities = 187/329 (56%), Positives = 246/329 (74%), Gaps = 6/329 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            F + CDAS VGIGAVLSQDGRP+ FFSEKLT  R RYSTYD+EFYA+VRA+RHW+HYL +
Sbjct: 836  FVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAY 895

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            REF +++DH +L+++ +Q  +S +HA W++FL +F F L++KSG SN VADALSRR  +L
Sbjct: 896  REFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKML 955

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQ---QGTSSDFILSDGFLFRGTRLCIPVCS 538
            + M   V GF+  ++ Y SD YF+K++A +Q   Q  +  + L + +LF+G +LCIP  S
Sbjct: 956  SVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGS 1015

Query: 539  LRNRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNA 709
            LR ++I ELHG    GH GRD+TL ++   ++WP +RRDV + V+RC  C   KG+A N 
Sbjct: 1016 LREQIIRELHGNGLGGHFGRDKTLVMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNT 1075

Query: 710  GLYRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVA 889
            GLY PLP P APW  +SMDFVLGLP+T +G DSIFVVVDRFSKMAHFI C RT+DA H+A
Sbjct: 1076 GLYVPLPEPDAPWIHLSMDFVLGLPKTTKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIA 1135

Query: 890  QLFFREVYRLHGLPLSIVSDRDTRFLSHF 976
            +LFFRE+  LHG+P SIVSDR  +F+ +F
Sbjct: 1136 ELFFREIVILHGIPTSIVSDRHVKFMGYF 1164


>ref|XP_007221749.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
            gi|462418685|gb|EMJ22948.1| hypothetical protein
            PRUPE_ppb022800mg, partial [Prunus persica]
          Length = 722

 Score =  376 bits (966), Expect = e-122
 Identities = 181/329 (55%), Positives = 237/329 (72%), Gaps = 6/329 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE+  DAS VGIG VLSQ+G PVA+FSEKL   + +YSTY+ EFY++VRA+R+W++YL  
Sbjct: 89   FEVARDASGVGIGGVLSQEGHPVAYFSEKLNEAKQKYSTYNKEFYSIVRALRYWQYYLLP 148

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
             EFVL++DH +L+++ +Q NVS+RH  W  +LQ FTFV+RH+ G  N+VADALSR   +L
Sbjct: 149  NEFVLYSDHQALRYLHSQRNVSSRHIKWTEYLQIFTFVIRHRPGVDNKVADALSRVGVIL 208

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALV---QQGTSSDFILSDGFLFRGTRLCIPVCS 538
              +   V GFD  ++ Y S P F  +   V    +    DF+L DG+LFRGT+LCIP  S
Sbjct: 209  QSLTAQVVGFDKIKTEYSSCPDFGLIFQEVTARNRRDHVDFLLRDGYLFRGTQLCIPRTS 268

Query: 539  LRNRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNA 709
            LR+ L+ ELH     GH G+D+T+ L+   F+WPSL+RDV   + +CR CQ+AK    N 
Sbjct: 269  LRDFLVWELHAGGLAGHFGKDKTITLVADRFYWPSLKRDVAHILAQCRTCQLAKARKQNT 328

Query: 710  GLYRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVA 889
            GLY PLP+P  PW  +SMDFVLGLP+T RGHDSI VVVDRFSKMAHF+ C +  DA +VA
Sbjct: 329  GLYTPLPIPHTPWKDLSMDFVLGLPKTARGHDSILVVVDRFSKMAHFLPCSKAADASYVA 388

Query: 890  QLFFREVYRLHGLPLSIVSDRDTRFLSHF 976
            +LFF+EV  LHGLP+SIVSDRD +F+S+F
Sbjct: 389  KLFFKEVIHLHGLPVSIVSDRDVKFVSYF 417


>ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508700944|gb|EOX92840.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 647

 Score =  374 bits (960), Expect = e-122
 Identities = 181/329 (55%), Positives = 239/329 (72%), Gaps = 6/329 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            F + CDAS VGIGAVLSQDGR + FFSEKLT  R RYSTYD+EFYA+VRA+RHW+HYL +
Sbjct: 104  FVVECDASHVGIGAVLSQDGRSIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAY 163

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
             EF +++DH +L+++ +Q  +S +HA W+ FL +F F L++KSG SN VADALSRR  +L
Sbjct: 164  CEFAVYSDHQALRYLHSQKKLSNQHAKWSFFLNEFNFSLKYKSGQSNTVADALSRRCKML 223

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQ---QGTSSDFILSDGFLFRGTRLCIPVCS 538
            + M   V GF+  ++ Y SD YF+K++A +Q   Q  +  + L + +LF+G +LCI   S
Sbjct: 224  SVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAGNLPYRLHEDYLFKGNQLCILEGS 283

Query: 539  LRNRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNA 709
            LR ++I ELHG    GH GRD+TL ++   ++WP + RDV + V+RC  C   KG+A N 
Sbjct: 284  LREQIIGELHGNGLGGHFGRDKTLAMVADRYYWPKMHRDVERLVKRCSTCLFGKGSAQNT 343

Query: 710  GLYRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVA 889
            GLY PL  P APW  +SMDFVLGLP+  +G DSIFVVV +FSKMAHFI C +T+DA H+A
Sbjct: 344  GLYVPLLEPDAPWIHLSMDFVLGLPKIAKGFDSIFVVVYQFSKMAHFIPCFKTSDATHIA 403

Query: 890  QLFFREVYRLHGLPLSIVSDRDTRFLSHF 976
            +LFF EV RLHG+P SIVSDRD +F+ HF
Sbjct: 404  ELFFCEVVRLHGIPTSIVSDRDVKFMGHF 432


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  394 bits (1012), Expect = e-121
 Identities = 187/327 (57%), Positives = 238/327 (72%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FEL CDAS +G+G VL Q+G+PVA+FSEKL+GP   YSTYD E YA+VR +  W+HYL+ 
Sbjct: 1014 FELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWP 1073

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SLKHI +Q  ++ RHA W  F++ F +V++HK G  N +ADALSRR++LL
Sbjct: 1074 KEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLL 1133

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQG-TSSDFILSDGFLFRGTRLCIPVCSLR 544
            T +   + G +T +  Y  D  F  VL   + G T + F+++DGF+FR  +LCIP  S+R
Sbjct: 1134 TQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVR 1193

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
              L+ E HG   +GH G  +T D+L  HFFWP +RRDVG+FV RC  CQ AK      GL
Sbjct: 1194 LLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGL 1253

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLPVP+ PW  ISMDFVLGLPRT+RG DSIFVVVDRFSKMAHFI C +T DA H+A L
Sbjct: 1254 YMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADL 1313

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            FFRE+ RLHG+P +IVSDRDT+FLSHF
Sbjct: 1314 FFREIVRLHGVPNTIVSDRDTKFLSHF 1340



 Score =  220 bits (560), Expect = 6e-61
 Identities = 129/357 (36%), Positives = 194/357 (54%), Gaps = 34/357 (9%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            F ++CDAS  G+G VL Q+G  VA+ S +L      Y T+D+E  AVV A++ WRHYL  
Sbjct: 1806 FMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIG 1865

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
                ++TDH SLK+I  QS+++ R   W   ++ +   + +  G +N VADALSR+    
Sbjct: 1866 NRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHCN 1925

Query: 368  T-----------------DMRVSVQGF-----------DTFQSLYPSDPYFAKVLALVQQ 463
            T                 ++ +  +GF           D  +    +DP    +L  ++Q
Sbjct: 1926 TLGVRGIPPELNQQMEALNLSIVSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQ 1985

Query: 464  GTSSDFILSD-GFLFRGTRLCIP-VCSLRNRLISELHGVG---HVGRDRTLDLLQRHFFW 628
            G ++ FI  + G L+   R+C+P V  L+  ++ E H      H G  +    L+  ++W
Sbjct: 1986 GKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWW 2045

Query: 629  PSLRRDVGKFVQRCRVCQVAKGTASN-AGLYRPLPVPSAPWAAISMDFVLGLPRTQRGHD 805
             S++R++ +FV  C VCQ  K      AGL +PL VP   W  I MDF+ GLP+TQ G+D
Sbjct: 2046 VSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYD 2105

Query: 806  SIFVVVDRFSKMAHFIACKRTTDALHVAQLFFREVYRLHGLPLSIVSDRDTRFLSHF 976
            SI+VVVDR +K+A FI  K T     +A+L+F  +  LHG+P  IVSDR+++F SHF
Sbjct: 2106 SIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHF 2162


>gb|KYP31454.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 978

 Score =  378 bits (971), Expect = e-120
 Identities = 176/326 (53%), Positives = 233/326 (71%), Gaps = 3/326 (0%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE+ C A  VGIGAVL Q+G P+A+FSEKL+G    +STYD E YA+VRA++ W+HYLF 
Sbjct: 415  FEIECVAFNVGIGAVLLQEGHPIAYFSEKLSGAALNFSTYDKELYALVRALKTWQHYLFP 474

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SL+++  Q  ++ RHA W  FL+QF +V++HK G  N VADALSRRH LL
Sbjct: 475  KEFVIHSDHESLRYLKGQGKLNKRHAKWVEFLEQFPYVIKHKRGKGNIVADALSRRHILL 534

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSSDFILSDGFLFRGTRLCIPVCSLRN 547
            + +   + GF++ + +Y SD  F ++ A  ++ +   +   +GFLF+  +LC+P CS+R 
Sbjct: 535  STLETKLLGFESLKEMYASDETFGEIYAACEKLSQYGYFKHNGFLFKENKLCVPTCSIRE 594

Query: 548  RLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGLY 718
             L+SE HG   +GH G  +TL++LQ HFFWP ++RDV KF + C VC++AK  +   GLY
Sbjct: 595  LLVSESHGGGLMGHFGIKKTLEILQEHFFWPHMKRDVQKFCEHCVVCKMAKSKSLPHGLY 654

Query: 719  RPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQLF 898
             PLP P  PW  ISMDFVLGLPRT+ G D IFVV DRFSKMAHFI CK+  DA HV  LF
Sbjct: 655  TPLPTPEYPWIDISMDFVLGLPRTKNGKDFIFVVFDRFSKMAHFIPCKKVDDACHVDDLF 714

Query: 899  FREVYRLHGLPLSIVSDRDTRFLSHF 976
            F+EV RLHG+P SIVSD D +FLSHF
Sbjct: 715  FKEVVRLHGVPRSIVSDMDAKFLSHF 740


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  389 bits (998), Expect = e-120
 Identities = 184/327 (56%), Positives = 240/327 (73%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FEL CDAS +G+G VL QDG+PVA+FSEK +GP   YSTYD E YA+VR +  W+HYL+ 
Sbjct: 1058 FELECDASGIGLGGVLLQDGKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQHYLWP 1117

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SLKHI +Q+ ++ RHA W  F++ F +V++HK G  N +ADALSRR+++L
Sbjct: 1118 KEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKENVIADALSRRYTML 1177

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQG-TSSDFILSDGFLFRGTRLCIPVCSLR 544
            + +   + G +T +  Y  D  F  VL   ++G T + F+L+DGF+FR  +LCIP  S+R
Sbjct: 1178 SQLDFKIFGLETIKDQYVHDAEFKDVLQNCKEGRTWNKFVLNDGFVFRANKLCIPASSVR 1237

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
              L+ E HG   +GH G  +T D+L  HFFWP +RRDV +FV RC  CQ AK   +  GL
Sbjct: 1238 LLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGL 1297

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLPVPS PW  ISMDFVLGLPRT++G DSIFVVVDRFSKMAHFI C ++ DA++VA L
Sbjct: 1298 YMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADL 1357

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            FFRE+ RLHG+P +IVSDRDT+FLSHF
Sbjct: 1358 FFREIIRLHGVPNTIVSDRDTKFLSHF 1384


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  387 bits (993), Expect = e-120
 Identities = 184/327 (56%), Positives = 236/327 (72%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FEL CDAS +G+G VL Q+G+ VA+FSEKL+GP   YSTYD E YA+VR +  W+HYL+ 
Sbjct: 993  FELECDASGIGLGGVLLQEGKLVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWP 1052

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SLKHI +Q  ++ RHA W  F++ F +V++HK G  N +A+ALSRR++LL
Sbjct: 1053 KEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLL 1112

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQG-TSSDFILSDGFLFRGTRLCIPVCSLR 544
            T +   + G +T +  Y  D  F  VL   + G T + F+++DGF+FR  +LCIP  S+R
Sbjct: 1113 TQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVR 1172

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
              L+ E HG   +GH G  +T D+L  HFFWP +RRDVG+FV RC  CQ AK      GL
Sbjct: 1173 LLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGL 1232

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLPVP+ PW  ISMDFVLGLPRT+RG DSIFVVVDRFSKM HFI C +T DA H+A L
Sbjct: 1233 YMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKTDDASHIADL 1292

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            FFRE+ RLHG+P +IVSDRDT+FLSHF
Sbjct: 1293 FFREIVRLHGVPNTIVSDRDTKFLSHF 1319


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  385 bits (989), Expect = e-119
 Identities = 182/327 (55%), Positives = 239/327 (73%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE  CDAS +G+G VL Q+G+PVA+FSEKL+GP   YSTYD E +A+VR +  W+HYL+ 
Sbjct: 1042 FEHECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWP 1101

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SLKHI +Q+ ++ RHA W  F++ F +V++HK G  N +ADALSRR+++L
Sbjct: 1102 KEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAML 1161

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQG-TSSDFILSDGFLFRGTRLCIPVCSLR 544
            + +   + G +T +  Y  D  F  VL   ++G T + F+L++GF+FR  +LCIP  S+R
Sbjct: 1162 SQLDFKIFGLETIKEQYAHDDDFKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVR 1221

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
              L+ E HG   +GH G  +T D+L  HFFWP +RRDV +FV RC  CQ AK   +  GL
Sbjct: 1222 MLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGL 1281

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLPVPS PW  ISMDFVLGLPRT++G DSIFVVVDRFSKMAHFI C ++ DA HVA L
Sbjct: 1282 YMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADL 1341

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            FFRE+ RLHG+P +IVSDRDT+FLSHF
Sbjct: 1342 FFREIVRLHGVPNTIVSDRDTKFLSHF 1368


>ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, partial [Prunus persica]
           gi|462408434|gb|EMJ13768.1| hypothetical protein
           PRUPE_ppa015570mg, partial [Prunus persica]
          Length = 541

 Score =  362 bits (928), Expect = e-119
 Identities = 181/327 (55%), Positives = 228/327 (69%), Gaps = 4/327 (1%)
 Frame = +2

Query: 8   FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
           FE+ CDAS          D RPVAFFSEKL+  R ++STYD EFYAVVRA++ W HYL  
Sbjct: 50  FEVECDAS----------DKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQ 99

Query: 188 REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
           +EFVLFTDH +LK+I++Q N+   HA W            H SG +NRVADALSRR SLL
Sbjct: 100 KEFVLFTDHQALKYITSQKNIDKMHARW------------HNSGKTNRVADALSRRASLL 147

Query: 368 TDMRVSVQGFDTFQSLYPSDPYFAKVLA-LVQQGTSSDFILSDGFLFRGTRLCIPVCSLR 544
             +   V GF+  + LY  D  F ++      Q   +D+ L++G+LF+G +LCIPV SLR
Sbjct: 148 VTLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMADYFLNEGYLFKGNQLCIPVSSLR 207

Query: 545 NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
            +LI +LHG    GH+G D+T+  ++  F+WP L+RDVG  V++C  CQ +KG   N GL
Sbjct: 208 EKLIRDLHGGGLSGHLGCDKTIAGMEETFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGL 267

Query: 716 YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
           Y PLPVP+  W  ++MDFVLGLPRTQRG DS+FVVVDRFSKMAHFIACK+T DA ++A+L
Sbjct: 268 YVPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACKKTDDASNIAKL 327

Query: 896 FFREVYRLHGLPLSIVSDRDTRFLSHF 976
           FFREV RLHG+P SI SDRDT+FLSHF
Sbjct: 328 FFREVVRLHGIPTSITSDRDTKFLSHF 354


>ref|XP_014628670.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106797892,
            partial [Glycine max]
          Length = 2239

 Score =  386 bits (992), Expect = e-119
 Identities = 177/326 (54%), Positives = 235/326 (72%), Gaps = 3/326 (0%)
 Frame = +2

Query: 8    FELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLFH 187
            FE+ CDAS VGIGAVL ++G P+A+FSEKL+GP   YSTYD E YA+VRA++ W+HYL+ 
Sbjct: 1692 FEIECDASNVGIGAVLMEEGHPIAYFSEKLSGPTLNYSTYDKELYALVRALKTWQHYLYP 1751

Query: 188  REFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSLL 367
            +EFV+ +DH+SLK+I  Q  ++ RHA W  FL+QF +V++HK G  N VADALSRRH+LL
Sbjct: 1752 KEFVIHSDHESLKYIKGQGKLNKRHAKWVEFLEQFPYVIKHKKGKGNIVADALSRRHALL 1811

Query: 368  TDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSSDFILSDGFLFRGTRLCIPVCSLRN 547
            + +   + G +  +S+Y +D  F ++    ++ + + F   +GFLF+  +LC+P CS RN
Sbjct: 1812 SMLETKLIGLECLKSMYENDETFGEIFKNCEKFSENGFFRHEGFLFKENKLCVPKCSTRN 1871

Query: 548  RLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGLY 718
             L+ E H    +GH G  +TL+ LQ HF+WP +++DV KF + C VC+ AK      GLY
Sbjct: 1872 LLVCEAHXGGLMGHFGVQKTLETLQEHFYWPHMKKDVQKFCEHCIVCKKAKSKVKPHGLY 1931

Query: 719  RPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQLF 898
             PLP+P  PW  +SMDFVLGLP+T  G DSIFVVVDRFSKMAHFI CK+  DA HVA LF
Sbjct: 1932 TPLPIPEYPWIDLSMDFVLGLPKTSNGRDSIFVVVDRFSKMAHFIPCKKVDDASHVADLF 1991

Query: 899  FREVYRLHGLPLSIVSDRDTRFLSHF 976
            F+E+ RLHGLP SIV DRD++FLSHF
Sbjct: 1992 FKEIVRLHGLPRSIVRDRDSKFLSHF 2017



 Score =  364 bits (935), Expect = e-111
 Identities = 174/327 (53%), Positives = 228/327 (69%), Gaps = 3/327 (0%)
 Frame = +2

Query: 5    PFELHCDASKVGIGAVLSQDGRPVAFFSEKLTGPRSRYSTYDVEFYAVVRAVRHWRHYLF 184
            PFE+ CDAS VGIGAVL Q+ RP+A+FSEKL G R  Y TYD EFYA+VRA+ HW HYL 
Sbjct: 347  PFEVECDASGVGIGAVLIQNKRPIAYFSEKLGGTRLNYCTYDKEFYAIVRALDHWNHYLR 406

Query: 185  HREFVLFTDHDSLKHISNQSNVSARHASWAAFLQQFTFVLRHKSGASNRVADALSRRHSL 364
               F+L +DH+SLK+I+ Q  +S RHA W  FLQ F F  ++K G SN VADALSRR++L
Sbjct: 407  SNHFILHSDHESLKYINGQQKLSPRHAKWVEFLQSFNFSSKYKDGKSNVVADALSRRYAL 466

Query: 365  LTDMRVSVQGFDTFQSLYPSDPYFAKVLALVQQGTSSDFILSDGFLFRGTRLCIPVCSLR 544
            ++ +   + GF+T +  Y  D  F ++ +  + G    +I+ DGFLF+  RLCIP  S+R
Sbjct: 467  ISILETRLLGFETLKDYYKEDVDFGEIYSNCENGAFGKYIVQDGFLFKENRLCIPRHSIR 526

Query: 545  NRLISELHG---VGHVGRDRTLDLLQRHFFWPSLRRDVGKFVQRCRVCQVAKGTASNAGL 715
              L+ E HG    GH G  +TL++L+ HF WP +  DV K + RC  C +AK ++   G 
Sbjct: 527  ELLVREAHGGGLAGHFGITKTLEILKEHFHWPKMLGDVQKVISRCVTCHMAK-SSFKPGA 585

Query: 716  YRPLPVPSAPWAAISMDFVLGLPRTQRGHDSIFVVVDRFSKMAHFIACKRTTDALHVAQL 895
            Y PLP PS PW  +SMDF++ LPRTQRG D+I VVVDRFSKMAHF+AC +T DA +VA L
Sbjct: 586  YTPLPTPSGPWMDVSMDFIVALPRTQRGKDAIMVVVDRFSKMAHFVACHKTDDASNVADL 645

Query: 896  FFREVYRLHGLPLSIVSDRDTRFLSHF 976
            +FRE+ RLHG+P +IVSD D++FLS+F
Sbjct: 646  YFREIVRLHGVPKTIVSDHDSKFLSYF 672