BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00053961
         (365 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP39938.1| Retrovirus-related Pol polyprotein from transposo...    82   2e-17
gb|KYP37488.1| Retrovirus-related Pol polyprotein from transposo...    80   7e-17
gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposo...    81   6e-16
ref|XP_015168504.1| PREDICTED: uncharacterized protein LOC107062...    82   8e-16
ref|XP_010321261.1| PREDICTED: uncharacterized protein LOC104647...    81   2e-15
gb|KYP63877.1| Retrovirus-related Pol polyprotein from transposo...    79   2e-15
ref|XP_010690723.1| PREDICTED: uncharacterized protein LOC104904...    80   2e-15
ref|XP_015168851.1| PREDICTED: uncharacterized protein LOC107062...    80   2e-15
gb|KYP72197.1| Retrovirus-related Pol polyprotein from transposo...    79   4e-15
ref|XP_009759202.1| PREDICTED: uncharacterized protein LOC104211...    78   4e-15
ref|XP_009631565.1| PREDICTED: uncharacterized protein LOC104121...    79   7e-15
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    79   8e-15
ref|XP_015078582.1| PREDICTED: uncharacterized protein LOC107022...    78   1e-14
ref|XP_015084421.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...    78   1e-14
ref|XP_010692573.1| PREDICTED: uncharacterized protein LOC104905...    77   3e-14
ref|XP_010260173.1| PREDICTED: uncharacterized protein LOC104599...    77   4e-14
gb|KYP57023.1| Retrovirus-related Pol polyprotein from transposo...    77   5e-14
ref|XP_009784856.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    77   5e-14
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo...    76   7e-14
ref|XP_012065055.1| PREDICTED: uncharacterized protein LOC105628...    75   1e-13

>gb|KYP39938.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 171

 Score = 82.0 bits (201), Expect = 2e-17
 Identities = 46/110 (41%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   CWLQDPKNGGVKAVGRIVEGLYIXXXXXXXXXXXXXXXX-DLHIWHRRLGHTSMSCMEHI 179
           C +QD     +  VGR  +GLY+                 D  IWH RLGHTS + M+ I
Sbjct: 59  CVIQDLTTRTLIGVGRHRDGLYLLEPIQDGVVAMKVDRSIDESIWHWRLGHTSETKMKQI 118

Query: 180 EFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIHVDIWGPY 329
           E L  V +      C +C  AKQ RLPFP S+I S   F+LIH D+WGPY
Sbjct: 119 EPLSDVVSYSSFMHCDSCIRAKQTRLPFPSSSIKSNSCFDLIHCDVWGPY 168


>gb|KYP37488.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 131

 Score = 79.7 bits (195), Expect = 7e-17
 Identities = 36/72 (50%), Positives = 44/72 (61%)
 Frame = +3

Query: 129 IWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIH 308
           +WH RLGH S  C++ I+       KD  Y C  CH AKQ RL FP+ST  S+  F LIH
Sbjct: 47  LWHFRLGHASNKCIDVIKSKFPFVKKDKSYVCDVCHYAKQRRLIFPISTSKSEKCFNLIH 106

Query: 309 VDIWGPYLESSI 344
           VD+WGPY   S+
Sbjct: 107 VDLWGPYSTPSV 118


>gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 301

 Score = 80.9 bits (198), Expect = 6e-16
 Identities = 37/81 (45%), Positives = 48/81 (59%)
 Frame = +3

Query: 123 LHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFEL 302
           + +WH RLGH S   M  ++   S  N +  + C+TCH AKQ +LPFPLS  H+   F L
Sbjct: 39  IDLWHFRLGHLSSERMHIMQQQYSCLNNNKNFVCNTCHYAKQRKLPFPLSNSHATQPFAL 98

Query: 303 IHVDIWGPYLESSITNTSYML 365
           IH+DIWGPY   S+    Y L
Sbjct: 99  IHMDIWGPYSTLSMNGHRYFL 119


>ref|XP_015168504.1| PREDICTED: uncharacterized protein LOC107062412 [Solanum tuberosum]
          Length = 529

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 38/82 (46%), Positives = 50/82 (60%)
 Frame = +3

Query: 120 DLHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFE 299
           ++ +WH RLGH   S M+  +F+K   N +  + C  C +AKQ RL FPLS IHSK  F+
Sbjct: 412 NVDLWHVRLGHVPCSVMKKFDFIKFAHNSN--FVCDVCPKAKQTRLSFPLSHIHSKKIFD 469

Query: 300 LIHVDIWGPYLESSITNTSYML 365
           +IHVD WGPY  S+     Y L
Sbjct: 470 MIHVDTWGPYKSSTYDGFRYFL 491


>ref|XP_010321261.1| PREDICTED: uncharacterized protein LOC104647531 [Solanum
           lycopersicum]
          Length = 606

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   CWLQDPKNGGVKAVGRIVEGLYIXXXXXXXXXXXXXXXXDLH---IWHRRLGHTSMSCME 173
           C +Q      V  +G+  +GLYI                +     +WH RLGH S+  ++
Sbjct: 237 CVMQTLFTREVIGIGKESDGLYIHRQEVIPTIGAAFKSKNSEEHKLWHLRLGHPSLKVLQ 296

Query: 174 HIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIHVDIWGPYLESSITNT 353
           H+  LK+   + V   C  C  AKQCRL FP S  HS   F+L+H+D+WGP+ + +    
Sbjct: 297 HLHILKNKLVETVHEDCLICPLAKQCRLKFPSSVTHSNKMFQLVHLDVWGPHKDPTYDRK 356

Query: 354 SYML 365
            Y L
Sbjct: 357 KYFL 360


>gb|KYP63877.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 257

 Score = 79.0 bits (193), Expect = 2e-15
 Identities = 36/81 (44%), Positives = 47/81 (58%)
 Frame = +3

Query: 123 LHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFEL 302
           + +WH RLGH S   M  ++   S  N +  + C+TCH AKQ +LPFPLS  H+   F  
Sbjct: 118 IDLWHFRLGHLSSERMHIMQQQYSCLNNNKNFVCNTCHYAKQRKLPFPLSNSHATQPFAF 177

Query: 303 IHVDIWGPYLESSITNTSYML 365
           IH+DIWGPY   S+    Y L
Sbjct: 178 IHMDIWGPYSMLSMNGHRYFL 198


>ref|XP_010690723.1| PREDICTED: uncharacterized protein LOC104904224 [Beta vulgaris
           subsp. vulgaris]
          Length = 631

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +3

Query: 123 LHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFEL 302
           L IWH RLGH S+S M+H+  L  + + D   +C  C  AK  ++PF LS+ H+ H F+L
Sbjct: 447 LCIWHARLGHMSVSKMKHVTDLLDISSSD-NMNCEACIMAKHYKIPFSLSSSHATHIFDL 505

Query: 303 IHVDIWGPYLESSITNTSYML 365
           +H+D+WGPY     T  +Y L
Sbjct: 506 VHIDLWGPYRTPCYTGATYFL 526


>ref|XP_015168851.1| PREDICTED: uncharacterized protein LOC107062574 [Solanum tuberosum]
          Length = 1100

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 37/79 (46%), Positives = 50/79 (63%)
 Frame = +3

Query: 129 IWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIH 308
           +WH RLGH   S M+++ FL    N + +Y C  C +A+Q RLPFP+S I SK  FEL+H
Sbjct: 607 LWHVRLGHLPFSVMKNLSFLS--INSNSQYICPVCPKARQHRLPFPISAIKSKVLFELLH 664

Query: 309 VDIWGPYLESSITNTSYML 365
           +D WGPY  S+    +Y L
Sbjct: 665 IDTWGPYKTSTHDGYNYFL 683


>gb|KYP72197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 384

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 42/82 (51%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +3

Query: 129 IWHRRLGHTSMSCMEHIEFLKSVCNKDVKYS---CSTCHEAKQCRLPFPLSTIHSKHAFE 299
           +WH RLGHTS   ++H   L S  N  V Y    C TCH AKQ +LPFP+S   S   FE
Sbjct: 65  LWHLRLGHTSNKVLKH---LSSKYNDIVFYCLQPCDTCHYAKQKKLPFPVSNCKSSRFFE 121

Query: 300 LIHVDIWGPYLESSITNTSYML 365
           LIHVDIWGP   +SI    Y L
Sbjct: 122 LIHVDIWGPVATTSIDGFKYFL 143


>ref|XP_009759202.1| PREDICTED: uncharacterized protein LOC104211777 [Nicotiana
           sylvestris]
          Length = 246

 Score = 77.8 bits (190), Expect = 4e-15
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = +3

Query: 24  NGGVKAVGRIVEGLY-IXXXXXXXXXXXXXXXXDLHIWHRRLGHTSMSCMEHIEFLKSVC 200
           NG V  +GR   GL+ I                +  +WH RLGH S   M+HI  LK+  
Sbjct: 119 NGKVMRIGRENSGLHLIKENLPIAAASFLKENGETTLWHLRLGHASTKSMQHILELKNKI 178

Query: 201 NKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIHVDIWGPY 329
           +   + +C  C  A+QCRL FP+S+I S   F+L+H+D+WGP+
Sbjct: 179 HAREQDNCEVCPLARQCRLQFPVSSIRSSSYFQLVHMDVWGPH 221


>ref|XP_009631565.1| PREDICTED: uncharacterized protein LOC104121310 [Nicotiana
           tomentosiformis]
          Length = 461

 Score = 79.0 bits (193), Expect = 7e-15
 Identities = 37/82 (45%), Positives = 49/82 (59%)
 Frame = +3

Query: 120 DLHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFE 299
           D+++WH RLGH     M+H+ F+    + +    C  C +A+Q R+PF LS I SK AFE
Sbjct: 293 DVNLWHIRLGHLPFLSMKHLSFILLPSSSECL--CDICPKARQTRIPFALSQITSKRAFE 350

Query: 300 LIHVDIWGPYLESSITNTSYML 365
           LIHVD WGPY E +     Y L
Sbjct: 351 LIHVDTWGPYKEPTYNGFKYFL 372


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 41/121 (33%), Positives = 57/121 (47%)
 Frame = +3

Query: 3   CWLQDPKNGGVKAVGRIVEGLYIXXXXXXXXXXXXXXXXDLHIWHRRLGHTSMSCMEHIE 182
           C +QD     +   GR + GLY                    +WH+RLGH S   +  + 
Sbjct: 464 CIVQDRTTLMLIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLP 523

Query: 183 FLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIHVDIWGPYLESSITNTSYM 362
           F     +     +C  C +AKQ R PFPLS+  +  AFEL+H D+WGPY  +SI  + Y 
Sbjct: 524 FSDVTSSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYF 583

Query: 363 L 365
           L
Sbjct: 584 L 584


>ref|XP_015078582.1| PREDICTED: uncharacterized protein LOC107022495 [Solanum pennellii]
          Length = 918

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 36/82 (43%), Positives = 50/82 (60%)
 Frame = +3

Query: 120 DLHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFE 299
           D+ +WH RLGH   S M+++ F+         Y C  C +A+Q RLPFP+S+I SK  FE
Sbjct: 606 DVALWHVRLGHLPFSVMQNLAFISFPSTSP--YICPVCPKARQNRLPFPVSSIKSKRIFE 663

Query: 300 LIHVDIWGPYLESSITNTSYML 365
           LIH+D WGP+  S+    +Y L
Sbjct: 664 LIHIDTWGPFRSSTHDGYNYFL 685


>ref|XP_015084421.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Solanum pennellii]
          Length = 1434

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
 Frame = +3

Query: 9   LQDPKNGGVKAVGRIVEGLY----------IXXXXXXXXXXXXXXXXDLHIWHRRLGHTS 158
           L D  NG VK +G+   GLY          I                D+ +WH+RLGH S
Sbjct: 460 LYDLFNGKVKGIGKEQGGLYMFKSGSTLNKIDKHKQHVMVAAGTSNQDIQLWHQRLGHPS 519

Query: 159 MSCMEHIEFLKSVCNKD-VKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIHVDIWGPYLE 335
              M+H++ + S  NKD V  SC  C  AKQ R  FP S   +  +F+L+H+D+WGPY  
Sbjct: 520 HIIMKHLKLISS--NKDDVVTSCPVCPLAKQTRQVFPSSNSRASTSFDLVHMDLWGPYNI 577

Query: 336 SSITNTSYML 365
           S++    Y L
Sbjct: 578 STLDKKHYFL 587


>ref|XP_010692573.1| PREDICTED: uncharacterized protein LOC104905670 [Beta vulgaris
           subsp. vulgaris]
          Length = 864

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 34/81 (41%), Positives = 50/81 (61%)
 Frame = +3

Query: 123 LHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFEL 302
           L + HRRLGH S+S M+HI+  K  C    +Y+C  C  +K  +LPFP+S   ++  F+L
Sbjct: 574 LELMHRRLGHVSLSKMQHIDDCK--CQGLTEYNCGVCLHSKHHKLPFPVSNSRAECCFDL 631

Query: 303 IHVDIWGPYLESSITNTSYML 365
           IH+D+WGPY   ++    Y L
Sbjct: 632 IHIDLWGPYRVHALNGARYFL 652


>ref|XP_010260173.1| PREDICTED: uncharacterized protein LOC104599359 [Nelumbo nucifera]
          Length = 783

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 34/80 (42%), Positives = 51/80 (63%)
 Frame = +3

Query: 123 LHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFEL 302
           L +WH  LGH S++ ++H++F  +  +  +   C   H AKQ RLPFP+S I SK   +L
Sbjct: 533 LVLWHNGLGHASVTALQHLDFCPTNASLPI---CEIYHLAKQQRLPFPVSKIRSKSIIDL 589

Query: 303 IHVDIWGPYLESSITNTSYM 362
           +H+D+WGPY   SIT+  Y+
Sbjct: 590 MHLDLWGPYKHPSITSAHYV 609


>gb|KYP57023.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 589

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = +3

Query: 123 LHIWHRRLGHT---SMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHA 293
           + +WH RLGH     M CM+   +   + NKD  + C+TCH AKQ RLPFPLS  H+   
Sbjct: 460 IDLWHFRLGHIYHDRMQCMKQY-YPCLISNKD--FMCNTCHHAKQRRLPFPLSNSHASQP 516

Query: 294 FELIHVDIWGPYLESSITNTSYML 365
           FE++H+DIWGP   +S+    Y L
Sbjct: 517 FEIMHMDIWGPCSTTSMHGHKYFL 540


>ref|XP_009784856.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC104233198 [Nicotiana sylvestris]
          Length = 1447

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 35/79 (44%), Positives = 46/79 (58%)
 Frame = +3

Query: 129 IWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIH 308
           +WH+RLGH     M+ I FL +  +    + CS C  A+Q RLPF  STIHS   F+L+H
Sbjct: 540 LWHQRLGHMPFRKMQSISFLSNKVSAKQPFICSICPMARQQRLPFYDSTIHSTKPFQLVH 599

Query: 309 VDIWGPYLESSITNTSYML 365
           +DIWGPY   +     Y L
Sbjct: 600 IDIWGPYNTKTYNGFRYFL 618


>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1316

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 34/81 (41%), Positives = 50/81 (61%)
 Frame = +3

Query: 123 LHIWHRRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFEL 302
           + +WH R+GH S   ++   FL    + D  +SC+TCH AKQ +LPFPLS  ++   F+L
Sbjct: 413 IDLWHFRMGHLSHERLQSFPFL----SVDTSFSCNTCHHAKQKKLPFPLSHSYASQPFDL 468

Query: 303 IHVDIWGPYLESSITNTSYML 365
           +H+DIWGP   +S+    Y L
Sbjct: 469 LHMDIWGPCSVTSMHGHKYFL 489


>ref|XP_012065055.1| PREDICTED: uncharacterized protein LOC105628267 [Jatropha curcas]
          Length = 472

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 38/76 (50%), Positives = 48/76 (63%)
 Frame = +3

Query: 138 RRLGHTSMSCMEHIEFLKSVCNKDVKYSCSTCHEAKQCRLPFPLSTIHSKHAFELIHVDI 317
           R LGH S   ++H++ +   C+   +  CSTC  AKQ RL FP S I S+H F+LIH D+
Sbjct: 276 RVLGHVSFKRLKHVDGIAH-CDY-TELMCSTCPVAKQTRLSFPTSAISSEHVFDLIHADL 333

Query: 318 WGPYLESSITNTSYML 365
           WGPY   SITN  YML
Sbjct: 334 WGPYKLKSITNAVYML 349