BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00053667
         (447 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47652.1| Retrovirus-related Pol polyprotein from transposo...   103   3e-23
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   103   7e-23
gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposo...    97   1e-22
gb|KYP66330.1| Transposon Ty2-C Gag-Pol polyprotein [Cajanus cajan]    98   5e-22
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   100   6e-22
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   100   1e-21
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]    99   1e-21
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    99   3e-21
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]    98   5e-21
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...    97   6e-21
gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposo...    97   8e-21
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo...    96   2e-20
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]    96   3e-20
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...    95   4e-20
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...    95   4e-20
emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera]    95   6e-20
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    95   6e-20
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    95   6e-20
gb|KYP63467.1| Retrovirus-related Pol polyprotein from transposo...    93   2e-19
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]    94   2e-19

>gb|KYP47652.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan] gi|1012364057|gb|KYP75240.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Cajanus cajan]
          Length = 523

 Score =  103 bits (258), Expect = 3e-23
 Identities = 52/109 (47%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +2

Query: 134 RNQFQVNLASTRNNLDCN-----IWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSA 298
           R + Q  +  + N   CN      WH RLGHP +D+   VF+ CN    MNK   D C+ 
Sbjct: 410 RPRQQSVITPSANTTSCNSVPYATWHSRLGHPHNDVMKSVFRLCNFPI-MNKTVSDFCTP 468

Query: 299 CYKAKCHKLPFTTSNTVISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
           C   K HKLP T S TV   PFELI+SDLWGP P+ S NG  YYV+F+D
Sbjct: 469 CCLGKSHKLPSTLSKTVYHTPFELIYSDLWGPAPITSDNGYQYYVTFVD 517


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  103 bits (256), Expect = 7e-23
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
 Frame = +2

Query: 2   DQATXXXXXXXXXXXXXYHFDLSKIKTQP-QNVKCNLSATTHHFSRNQFQVNLASTRNNL 178
           DQ T             Y FD S +  +P Q++  + S     FS      +L+ST    
Sbjct: 465 DQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSST---- 520

Query: 179 DCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTVISH 358
             ++WH+RLGHP++     V   CN++ H+NK+D + CS+C   K H+ PF+ S+T  + 
Sbjct: 521 -FDLWHKRLGHPSAATIKNVLSKCNVA-HINKMDSNFCSSCCLGKIHRFPFSLSHTTYTK 578

Query: 359 PFELIHSDLWGPFPVKSTNGASYYVSFID 445
           P ELIH DLWGP  V S +G  YY+ F+D
Sbjct: 579 PLELIHLDLWGPTLVLSNSGYRYYIHFVD 607


>gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 201

 Score = 97.4 bits (241), Expect = 1e-22
 Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
 Frame = +2

Query: 122 HHFSR-NQFQVNLASTRNNLDCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSA 298
           HH    + F  +  S  ++    +WH RLGHP+  I   V KSCN+    N  D   C +
Sbjct: 17  HHLKTISAFSTSKGSAHSSFQ--LWHSRLGHPSPRIVNTVLKSCNMPIAKNS-DSFFCQS 73

Query: 299 CYKAKCHKLPFTTSNTVISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
           C   K H+LPF  S TV + P ELI+SD+WGP P+ +TNGA YY+ F+D
Sbjct: 74  CCMGKSHQLPFIDSKTVYTSPLELIYSDIWGPSPIPATNGARYYIVFLD 122


>gb|KYP66330.1| Transposon Ty2-C Gag-Pol polyprotein [Cajanus cajan]
          Length = 287

 Score = 97.8 bits (242), Expect = 5e-22
 Identities = 47/92 (51%), Positives = 57/92 (61%)
 Frame = +2

Query: 170 NNLDCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTV 349
           N++    WH RLGH  +D+   VFK CN    +NK   D C++C   K HKLP   S TV
Sbjct: 150 NSVSYATWHSRLGHAHNDVIKSVFKLCNFPI-INKSVSDFCTSCCPGKSHKLPSQLSKTV 208

Query: 350 ISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
              PFELI+SDLWGP PV S NG  YYV+F+D
Sbjct: 209 YHTPFELIYSDLWGPAPVLSDNGYQYYVTFVD 240


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  100 bits (249), Expect = 6e-22
 Identities = 47/85 (55%), Positives = 56/85 (65%)
 Frame = +2

Query: 191 WHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTVISHPFEL 370
           WH RLGHP +D+   VFK CN  + +NK   D C++C   K HKLP   S TV   PFEL
Sbjct: 152 WHSRLGHPHNDVLKSVFKLCNFPN-INKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFEL 210

Query: 371 IHSDLWGPFPVKSTNGASYYVSFID 445
           I+SDLWGP PV S NG  YYV+F+D
Sbjct: 211 IYSDLWGPAPVLSDNGYQYYVTFVD 235


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 785

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = +2

Query: 191 WHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTVISHPFEL 370
           WH RLGHP +D+   VF+ CN    +NK   D C+ C   K HKLP  +S TV   PFEL
Sbjct: 405 WHSRLGHPHNDVIKSVFRLCNFPI-INKTASDFCTPCCLGKSHKLPSNSSKTVYHTPFEL 463

Query: 371 IHSDLWGPFPVKSTNGASYYVSFID 445
           I+SDLWGP P+ S NG  YYV+F+D
Sbjct: 464 IYSDLWGPAPITSDNGYQYYVTFVD 488


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score = 99.4 bits (246), Expect = 1e-21
 Identities = 57/140 (40%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
 Frame = +2

Query: 53  YHFDLSKI---KTQPQNVKCNLSATTHHFS-RNQFQVN-----LASTRNNLDCNIWHQRL 205
           Y FD S+I   K+ P  V  + S T+H    R   QV+     L S   +    IWH RL
Sbjct: 397 YAFDSSQIQLKKSAPSQVSLSQSVTSHQSGLRANCQVSIHVSDLQSQNGSSTVGIWHDRL 456

Query: 206 GHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTVISHPFELIHSDL 385
           GHP+  I   V   C LS     +    C AC   K H LPF TS +    P +L++SDL
Sbjct: 457 GHPSFKIVQTVMSLCKLSKFNKILPNFVCKACCLGKIHMLPFPTSISEYQEPLQLVYSDL 516

Query: 386 WGPFPVKSTNGASYYVSFID 445
           WGP PV+S+NG  YYV F+D
Sbjct: 517 WGPSPVQSSNGYKYYVCFVD 536


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 43/86 (50%), Positives = 57/86 (66%)
 Frame = +2

Query: 188 IWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTVISHPFE 367
           +WH RLGHPA +I   +  SCN+S   +K ++  C AC  AK HKLPF  S +  SHPF 
Sbjct: 173 LWHSRLGHPADNILKHILTSCNISHQCHKNNV--CCACQFAKSHKLPFNVSVSRASHPFA 230

Query: 368 LIHSDLWGPFPVKSTNGASYYVSFID 445
           L+H+DLWGP  + ST GA Y++ F+D
Sbjct: 231 LLHADLWGPTSIPSTTGARYFILFVD 256


>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
          Length = 1083

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
 Frame = +2

Query: 188 IWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDS--CSACYKAKCHKLPFTTSNTVISHP 361
           +WH RLGH ++DI TQ+ +SCN+S   NK  + S  CS+C  AK H+LP   S +  S P
Sbjct: 386 LWHYRLGHASTDIVTQIMQSCNVSFEKNKNXVCSTXCSSCQLAKSHRLPTHLSLSCASKP 445

Query: 362 FELIHSDLWGPFPVKSTNGASYYVSFID 445
            EL+H+DLWGP  VKST+GA Y++ F+D
Sbjct: 446 LELVHTDLWGPALVKSTSGARYFILFLD 473


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score = 97.4 bits (241), Expect = 6e-21
 Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
 Frame = +2

Query: 146 QVNLASTRNNLDCNI-----WHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKA 310
           Q  +  + N   CN      WH RLGHP +D+   +F+ CN    +NK   D C+ C   
Sbjct: 21  QSAITPSANITSCNFVPYATWHSRLGHPHNDVMKSMFRLCNFPI-INKTVSDFCTPCRLG 79

Query: 311 KCHKLPFTTSNTVISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
           K HKLP T S TV   PFELI+SDLW P P+ S NG  YYV+F+D
Sbjct: 80  KSHKLPSTLSKTVYHTPFELIYSDLWRPAPITSDNGYQYYVTFVD 124


>gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 546

 Score = 97.1 bits (240), Expect = 8e-21
 Identities = 47/92 (51%), Positives = 57/92 (61%)
 Frame = +2

Query: 170 NNLDCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTV 349
           N++    WH RLGH  +D+   VFK CN    +NK   D C++C   K HKLP   S TV
Sbjct: 434 NSVSYATWHSRLGHAHNDVIKSVFKLCNFPI-INKSVSDFCTSCCLGKSHKLPSHLSKTV 492

Query: 350 ISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
              PFELI+SDLWGP PV S NG  YYV+F+D
Sbjct: 493 YHTPFELIYSDLWGPAPVLSDNGYQYYVTFVD 524


>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1007

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 46/110 (41%), Positives = 66/110 (60%)
 Frame = +2

Query: 116 TTHHFSRNQFQVNLASTRNNLDCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCS 295
           TT  +S  Q    L S ++  +  +WH RLGHP+S I   V   C +S + N  +L+ C 
Sbjct: 72  TTDSYSAYQAVTELNSAQSFSNLQLWHARLGHPSSKIVKTVLDKCQISCNTNN-NLN-CH 129

Query: 296 ACYKAKCHKLPFTTSNTVISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
           +C   K H+LPF  S TV S P EL+ +D+WGP P+ ST+G+ YY+ F+D
Sbjct: 130 SCCLGKVHQLPFIQSTTVYSKPLELVFTDIWGPSPIASTDGSRYYIVFLD 179


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 6/92 (6%)
 Frame = +2

Query: 188 IWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDS------CSACYKAKCHKLPFTTSNTV 349
           +WH RLGH +++I TQ+ +SCN+S   NK  + S      CS+C  AK H+LP   S + 
Sbjct: 386 LWHHRLGHASTNIVTQIMQSCNVSFEKNKNTVCSTVCSTVCSSCQLAKSHRLPTHLSLSC 445

Query: 350 ISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
            S P EL+H+DLWGP  VKST+GA Y++ F+D
Sbjct: 446 ASKPLELVHTDLWGPASVKSTSGARYFILFLD 477


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 46/92 (50%), Positives = 56/92 (60%)
 Frame = +2

Query: 170 NNLDCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTV 349
           N++    WH RLGH  +D+   VFK CN    +NK   D C++C   K HKLP   S TV
Sbjct: 110 NSVSYATWHSRLGHAHNDVIKSVFKLCNFPI-INKSVSDFCTSCCLGKSHKLPSQLSKTV 168

Query: 350 ISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
              PFELI+SDLWGP PV S NG  YYV+ +D
Sbjct: 169 YHTPFELIYSDLWGPAPVLSDNGYQYYVTLVD 200


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 46/92 (50%), Positives = 56/92 (60%)
 Frame = +2

Query: 170 NNLDCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTV 349
           N++    WH RLGH  +D+   VFK CN    +NK   D C++C   K HKLP   S TV
Sbjct: 131 NSVSYATWHSRLGHAHNDVIKSVFKLCNFPI-INKSVSDFCTSCCLGKSHKLPSQLSKTV 189

Query: 350 ISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
              PFELI+SDLWGP PV S NG  YYV+ +D
Sbjct: 190 YHTPFELIYSDLWGPAPVLSDNGYQYYVTLVD 221


>emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera]
          Length = 763

 Score = 94.7 bits (234), Expect = 6e-20
 Identities = 56/141 (39%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
 Frame = +2

Query: 53  YHFDLSKIKTQ---PQNVKCNLSATTHHFS-RNQFQVN-----LASTRNNLDCNIWHQRL 205
           Y FD S I+ Q   P  V  + S T+H    R   QV+     L S   +    +WH RL
Sbjct: 270 YAFDSSXIQLQKYAPSQVSLSQSVTSHQSDPRANCQVSVHVSDLQSHNGSXTIGLWHDRL 329

Query: 206 GHPASDITTQVFKSCNLSSHMNKVDLDS-CSACYKAKCHKLPFTTSNTVISHPFELIHSD 382
            HP+  I   V     LS   NK+  D  C ACY  K H LPF TS +    P +L++SD
Sbjct: 330 SHPSFKIVQTVMSLYKLSK-FNKILADFVCKACYLGKIHMLPFPTSISKYQEPLQLVYSD 388

Query: 383 LWGPFPVKSTNGASYYVSFID 445
           LWGP PV+S+NG  YY+ F++
Sbjct: 389 LWGPSPVQSSNGYKYYICFVB 409


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 94.7 bits (234), Expect = 6e-20
 Identities = 52/121 (42%), Positives = 70/121 (57%)
 Frame = +2

Query: 83  QPQNVKCNLSATTHHFSRNQFQVNLASTRNNLDCNIWHQRLGHPASDITTQVFKSCNLSS 262
           +P +   N SA   HFS         ST  N    +WH RLGH ASDI ++V  +CN++S
Sbjct: 280 KPYSSVNNASAFHSHFS---------STIEN-KAELWHNRLGHVASDIVSKVMNTCNVAS 329

Query: 263 HMNKVDLDSCSACYKAKCHKLPFTTSNTVISHPFELIHSDLWGPFPVKSTNGASYYVSFI 442
              K  +  CS C  AK H+LP   SN   S P EL+++D+WGP  VKST+GA Y++ F+
Sbjct: 330 GKYKSTV--CSDCQLAKSHRLPTQLSNFRASKPLELVYTDIWGPASVKSTSGAKYFILFV 387

Query: 443 D 445
           D
Sbjct: 388 D 388


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 94.7 bits (234), Expect = 6e-20
 Identities = 41/86 (47%), Positives = 55/86 (63%)
 Frame = +2

Query: 188 IWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTVISHPFE 367
           +WH RLGHPA +I   +  SCN+S   +K ++  C AC  AK HKLPF    +  SHP  
Sbjct: 521 LWHSRLGHPADNILKHILTSCNISHQCHKNNV--CCACQFAKSHKLPFNVXVSRASHPLA 578

Query: 368 LIHSDLWGPFPVKSTNGASYYVSFID 445
           L+H+DLWGP  + ST GA Y++ F+D
Sbjct: 579 LLHADLWGPXSIPSTTGARYFILFVD 604


>gb|KYP63467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 411

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 44/92 (47%), Positives = 56/92 (60%)
 Frame = +2

Query: 170 NNLDCNIWHQRLGHPASDITTQVFKSCNLSSHMNKVDLDSCSACYKAKCHKLPFTTSNTV 349
           N++    WH RL HP +D+   VF+ CN  + +NK   D C+ C   K HKL  T S TV
Sbjct: 127 NSVSYATWHSRLEHPHNDVLKSVFRLCNFPT-INKTVCDFCTPCCLGKSHKLLSTLSKTV 185

Query: 350 ISHPFELIHSDLWGPFPVKSTNGASYYVSFID 445
            + PFEL +SDLWGP P  S NG  YYV+F+D
Sbjct: 186 YNTPFELTYSDLWGPAPFISDNGYQYYVTFVD 217


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
 Frame = +2

Query: 197 QRLGHPASDITTQVFKSCNLSSHMNKVDLDS--CSACYKAKCHKLPFTTSNTVISHPFEL 370
           +RLGH ++DI TQ+ +SCN+S   NK  + S  CS+C  AK H+LP   S +  S P EL
Sbjct: 406 ERLGHASTDIVTQIMQSCNVSFEKNKNTVCSTVCSSCQLAKSHRLPTHLSLSCASKPLEL 465

Query: 371 IHSDLWGPFPVKSTNGASYYVSFID 445
           +H DLWGP PVKST+GA Y++ F+D
Sbjct: 466 VHXDLWGPAPVKSTSGARYFJLFLD 490