BLASTX nr result

ID: Rehmannia27_contig00053342 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00053342
         (852 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78807.1| hypothetical protein VITISV_036807 [Vitis vinifera]    44   5e-11
emb|CAN59721.1| hypothetical protein VITISV_032350 [Vitis vinifera]    40   2e-09
ref|XP_015575036.1| PREDICTED: uncharacterized mitochondrial pro...    47   1e-06
emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]    38   4e-06
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M...    32   7e-06

>emb|CAN78807.1| hypothetical protein VITISV_036807 [Vitis vinifera]
          Length = 603

 Score = 44.3 bits (103), Expect(3) = 5e-11
 Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -3

Query: 658 NLVTWRCKKPNNVLL-SSEAEYRALHNASILLRTTWQKSSLMNLGW 524
           NLVTWR KK N V+L S+EA+Y ALH+A  ++  TW +  L  LG+
Sbjct: 486 NLVTWRIKKQNVVILFSTEAKYHALHHA--IMELTWLRLLLSKLGF 529



 Score = 42.7 bits (99), Expect(3) = 5e-11
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 13/49 (26%)
 Frame = -2

Query: 551 KVLFDELGLGPKKLMVFFYDN-------------SRSKHVELDGNYIKD 444
           ++L  +LG GPKK MV F DN             +++KH+ELD NYIKD
Sbjct: 521 RLLLSKLGFGPKKPMVLFCDNTTTIEIANNPIQHNQTKHIELDRNYIKD 569



 Score = 28.1 bits (61), Expect(3) = 5e-11
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 821 HMNGVNCIWAYLMFAPRKCV 762
           HMN VNCI  YL  +  KC+
Sbjct: 429 HMNAVNCILTYLKSSLGKCI 448


>emb|CAN59721.1| hypothetical protein VITISV_032350 [Vitis vinifera]
          Length = 610

 Score = 40.0 bits (92), Expect(3) = 2e-09
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
 Frame = -2

Query: 551 KVLFDELGLGPKKLMVFFYDNS-------------RSKHVELDGNYIKDRQKVS*IKIVN 411
           ++L  ELG G KK M+ F DN+             R+KH+EL  NYIKD      IK V 
Sbjct: 215 RILLSELGFGSKKPMMPFCDNTXTIEIAINLVQHDRTKHIELGMNYIKDNLDFGMIKEV- 273

Query: 410 C*YYCETLPCW 378
                ET+P +
Sbjct: 274 -----ETIPAY 279



 Score = 35.4 bits (80), Expect(3) = 2e-09
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 762 FSGHGHLGIVSYVDFVFGGCRMDRNSTSGYAS 667
           FS +GHL I  Y + +F G R +R ST GY S
Sbjct: 144 FSRYGHLDIEGYTNSIFVGSRSNRKSTLGYVS 175



 Score = 34.3 bits (77), Expect(3) = 2e-09
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -3

Query: 661 GNLVTWRCKKPNNV-LLSSEAEYRALHNASILLRTTWQKSSLMNLGW 524
           GN V+WR +K N V    +EA+YR  H+A++ L   W +  L  LG+
Sbjct: 179 GNFVSWRSEKQNVVSXXGAEAKYRVFHHATMEL--AWLRILLSELGF 223


>ref|XP_015575036.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Ricinus communis]
          Length = 213

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 28/47 (59%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = -3

Query: 661 GNLVTWRCKKPNNVLLSS-EAEYRALHNASILLRTTWQKSSLMNLGW 524
           GNLVTWR KK N V LSS EAEYRALH+A+  L   W K     LG+
Sbjct: 143 GNLVTWRSKKQNVVSLSSTEAEYRALHHATTEL--AWLKILFKELGF 187



 Score = 34.3 bits (77), Expect(2) = 1e-06
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -2

Query: 551 KVLFDELGLGPKKLMVFFYDNSRSKHVELDGNYIK 447
           K+LF ELG GPKK MV + DN+ +  +E+  N ++
Sbjct: 179 KILFKELGFGPKKPMVLYCDNTAA--IEIANNPVQ 211


>emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
          Length = 1387

 Score = 38.1 bits (87), Expect(3) = 4e-06
 Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -3

Query: 661  GNLVTWRCKKPNNVLLSS-EAEYRALHNASILLRTTWQKSSLMNLGW 524
            GNLVTWR KK   V LSS EAE+R +  A  L    W +  LM +G+
Sbjct: 1256 GNLVTWRSKKQKVVXLSSAEAEFRGM--AKGLCELLWLRRLLMEIGF 1300



 Score = 33.1 bits (74), Expect(3) = 4e-06
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -1

Query: 777  STQMCFSGHGHLGIVSYVDFVFGGCRMDRNSTSGY 673
            S  + FS + HL +  Y D  + G  MDR STSGY
Sbjct: 1216 SVGLXFSKNDHLRVEGYTDXDWAGNIMDRKSTSGY 1250



 Score = 26.9 bits (58), Expect(3) = 4e-06
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 13/46 (28%)
 Frame = -2

Query: 545  LFDELGLGPKKLMVFFYDNS-------------RSKHVELDGNYIK 447
            L  E+G  P   M  F DN              R+KHVE+D ++IK
Sbjct: 1294 LLMEIGFAPDSEMKLFCDNKAAIDISHNPIQHDRTKHVEVDRHFIK 1339


>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus domestica]
          Length = 1390

 Score = 32.3 bits (72), Expect(4) = 7e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 762  FSGHGHLGIVSYVDFVFGGCRMDRNSTSGY 673
            +  HGHL +  ++D  + G   DR STSGY
Sbjct: 1224 YQKHGHLNVEGFIDADWAGNVSDRRSTSGY 1253



 Score = 32.0 bits (71), Expect(4) = 7e-06
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 658  NLVTWRCKKPNNVLLSS-EAEYRALHNASILLRTTWQKSSLMNLGW 524
            NLVTWR KK   V  SS EAEYR +  A  +    W +  L  LG+
Sbjct: 1260 NLVTWRSKKQKVVSRSSAEAEYRGM--AHGICEILWLRKLLEGLGF 1303



 Score = 30.8 bits (68), Expect(4) = 7e-06
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 13/48 (27%)
 Frame = -2

Query: 545  LFDELGLGPKKLMVFFYDNS-------------RSKHVELDGNYIKDR 441
            L + LG  PK++M  + DN              R+KHVE+D ++IK++
Sbjct: 1297 LLEGLGFKPKEIMRLYCDNQSARDIADNPVQHDRTKHVEVDRHFIKEK 1344



 Score = 20.8 bits (42), Expect(4) = 7e-06
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 381  LGMYDIYGPT 352
            LGM DIY PT
Sbjct: 1381 LGMCDIYAPT 1390


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