BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00053308
         (595 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42646.1| hypothetical protein MIMGU_mgv1a019227mg [Erythra...    83   6e-22
ref|XP_006346504.1| PREDICTED: pentatricopeptide repeat-containi...    73   1e-16
ref|XP_004230838.1| PREDICTED: pentatricopeptide repeat-containi...    70   5e-16
ref|XP_015068967.1| PREDICTED: pentatricopeptide repeat-containi...    70   9e-16
ref|XP_009613228.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-14
ref|XP_002269015.2| PREDICTED: pentatricopeptide repeat-containi...    69   8e-13
emb|CBI20053.3| unnamed protein product [Vitis vinifera]               69   8e-13
emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]    69   8e-13
ref|XP_009769334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    64   1e-12
ref|XP_009769332.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-12
gb|KVH93273.1| Pentatricopeptide repeat-containing protein [Cyna...    65   2e-12
emb|CDO97115.1| unnamed protein product [Coffea canephora]             66   8e-12
ref|XP_008368150.1| PREDICTED: pentatricopeptide repeat-containi...    56   2e-11
ref|XP_008237676.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-11
ref|XP_009342418.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-11
ref|XP_012436499.1| PREDICTED: pentatricopeptide repeat-containi...    53   3e-10
ref|XP_004292464.2| PREDICTED: pentatricopeptide repeat-containi...    50   6e-10
ref|XP_002883912.1| pentatricopeptide repeat-containing protein ...    52   9e-10
ref|XP_007041360.1| Pentatricopeptide repeat (PPR) superfamily p...    49   1e-08
ref|XP_007041365.1| Pentatricopeptide repeat superfamily protein...    49   1e-08

>gb|EYU42646.1| hypothetical protein MIMGU_mgv1a019227mg [Erythranthe guttata]
          Length = 534

 Score = 82.8 bits (203), Expect(2) = 6e-22
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = +3

Query: 366 LSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKHALRL 545
           LSPNF PA+I ST+ HLR  P + L+F EN+D SSLT E YCLA++ AA  PSP+HAL+L
Sbjct: 67  LSPNFTPALISSTLLHLRRSPLLALSFIENIDRSSLTTECYCLAVAIAALLPSPRHALKL 126

Query: 546 LK 551
           LK
Sbjct: 127 LK 128



 Score = 48.5 bits (114), Expect(2) = 6e-22
 Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
 Frame = +1

Query: 172 MKSHNILCLYKTQH---P*INFSHFKSITTISLHFPTHLQAPSPPVIPITPEILVSSVKS 342
           MK H IL  YK      P I   H +  +T +   P     P PP I ++PE LVS+V+S
Sbjct: 1   MKPHKILSPYKFSRRYFPPIQVDHRRFSSTTAR--PPPPPPPPPPRISVSPETLVSTVES 58

Query: 343 SHWHFIKH 366
           S+WH IKH
Sbjct: 59  SNWHLIKH 66


>ref|XP_006346504.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Solanum tuberosum]
          Length = 618

 Score = 72.8 bits (177), Expect(2) = 1e-16
 Identities = 36/70 (51%), Positives = 45/70 (64%)
 Frame = +3

Query: 384 PAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKHALRLLKDLIS 563
           P +I +T+  LR  P  VL F ENL P+ L I  YCLAIS  +R PSPK A  LLK +IS
Sbjct: 56  PTLISATLPDLRSSPDRVLTFIENLSPNCLDISCYCLAISILSRLPSPKQATHLLKQVIS 115

Query: 564 SRASNHQEVF 593
            R ++H E+F
Sbjct: 116 YRLASHNEIF 125



 Score = 40.8 bits (94), Expect(2) = 1e-16
 Identities = 18/30 (60%), Positives = 20/30 (66%)
 Frame = +1

Query: 277 LQAPSPPVIPITPEILVSSVKSSHWHFIKH 366
           L   + P IPIT E+L  SV SS WHFIKH
Sbjct: 20  LSKSTSPTIPITAEVLRESVTSSQWHFIKH 49


>ref|XP_004230838.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Solanum lycopersicum]
          Length = 618

 Score = 70.5 bits (171), Expect(2) = 5e-16
 Identities = 36/70 (51%), Positives = 44/70 (62%)
 Frame = +3

Query: 384 PAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKHALRLLKDLIS 563
           P +I +T+  LR  P  VL F ENL P  L I  YCLAIS  +R PSPK A  LLK +IS
Sbjct: 56  PTLISATLPELRSSPDRVLTFIENLGPDCLDISCYCLAISILSRLPSPKQATHLLKQVIS 115

Query: 564 SRASNHQEVF 593
           SR ++  E+F
Sbjct: 116 SRFASPNEIF 125



 Score = 40.8 bits (94), Expect(2) = 5e-16
 Identities = 18/30 (60%), Positives = 20/30 (66%)
 Frame = +1

Query: 277 LQAPSPPVIPITPEILVSSVKSSHWHFIKH 366
           L   + P IPIT E+L  SV SS WHFIKH
Sbjct: 20  LSKSTSPTIPITAEVLRESVTSSQWHFIKH 49


>ref|XP_015068967.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Solanum pennellii]
          Length = 618

 Score = 70.1 bits (170), Expect(2) = 9e-16
 Identities = 35/70 (50%), Positives = 44/70 (62%)
 Frame = +3

Query: 384 PAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKHALRLLKDLIS 563
           P +I +T+  LR  P  V+ F ENL P  L I  YCLAIS  +R PSPK A  LLK +IS
Sbjct: 56  PTLISATLPELRSSPDRVITFIENLSPDCLDISCYCLAISILSRLPSPKQATHLLKQVIS 115

Query: 564 SRASNHQEVF 593
           SR ++  E+F
Sbjct: 116 SRFASPNEIF 125



 Score = 40.4 bits (93), Expect(2) = 9e-16
 Identities = 18/30 (60%), Positives = 20/30 (66%)
 Frame = +1

Query: 277 LQAPSPPVIPITPEILVSSVKSSHWHFIKH 366
           L   + P IPIT E+L  SV SS WHFIKH
Sbjct: 20  LSKSTSPTIPITAELLRESVTSSQWHFIKH 49


>ref|XP_009613228.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Nicotiana tomentosiformis]
          Length = 629

 Score = 67.0 bits (162), Expect(2) = 3e-14
 Identities = 35/80 (43%), Positives = 48/80 (60%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + +S    P +I + + +LR  P  VL F EN+ P+ L I  Y LAIS  +R PSPK 
Sbjct: 57  FIKHISGELKPTLISNALPNLRSSPDRVLTFIENISPNCLDITCYSLAISILSRLPSPKQ 116

Query: 534 ALRLLKDLISSRASNHQEVF 593
           A  LLK +IS+R + H+E F
Sbjct: 117 AAHLLKRVISARVATHKEFF 136



 Score = 38.5 bits (88), Expect(2) = 3e-14
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +1

Query: 220 INFSHFKSITTISLHFPTHLQAPSP-PVIPITPEILVSSVKSSHWHFIKH 366
           ++  HF ++T       +   APSP P +PIT + L  S+ SS W FIKH
Sbjct: 15  LSLRHFSTLTISK----SKKSAPSPSPTLPITADTLRDSITSSQWQFIKH 60


>ref|XP_002269015.2| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Vitis vinifera]
          Length = 660

 Score = 69.3 bits (168), Expect(2) = 8e-13
 Identities = 33/80 (41%), Positives = 52/80 (65%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + +SPN  PA+I + +Y+L   P +V +F  +L P  L  + YCLA+   AR PSPK 
Sbjct: 89  FIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKL 148

Query: 534 ALRLLKDLISSRASNHQEVF 593
           AL+LLK ++ +R + ++E+F
Sbjct: 149 ALQLLKQVMGTRIATNRELF 168



 Score = 31.2 bits (69), Expect(2) = 8e-13
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 283 APSPPVIPITPEILVSSVKSSHWHFIK 363
           A S    PIT E++  SV SS WHFI+
Sbjct: 65  ASSESTPPITEEVISKSVLSSQWHFIE 91


>emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score = 69.3 bits (168), Expect(2) = 8e-13
 Identities = 33/80 (41%), Positives = 52/80 (65%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + +SPN  PA+I + +Y+L   P +V +F  +L P  L  + YCLA+   AR PSPK 
Sbjct: 63  FIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKL 122

Query: 534 ALRLLKDLISSRASNHQEVF 593
           AL+LLK ++ +R + ++E+F
Sbjct: 123 ALQLLKQVMGTRIATNRELF 142



 Score = 31.2 bits (69), Expect(2) = 8e-13
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 283 APSPPVIPITPEILVSSVKSSHWHFIK 363
           A S    PIT E++  SV SS WHFI+
Sbjct: 39  ASSESTPPITEEVISKSVLSSQWHFIE 65


>emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score = 69.3 bits (168), Expect(2) = 8e-13
 Identities = 33/80 (41%), Positives = 52/80 (65%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + +SPN  PA+I + +Y+L   P +V +F  +L P  L  + YCLA+   AR PSPK 
Sbjct: 85  FIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKL 144

Query: 534 ALRLLKDLISSRASNHQEVF 593
           AL+LLK ++ +R + ++E+F
Sbjct: 145 ALQLLKQVMETRIATNRELF 164



 Score = 31.2 bits (69), Expect(2) = 8e-13
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 283 APSPPVIPITPEILVSSVKSSHWHFIK 363
           A S    PIT E++  SV SS WHFI+
Sbjct: 61  ASSESTPPITZEVISKSVLSSQWHFIE 87


>ref|XP_009769334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g15630, mitochondrial-like [Nicotiana
           sylvestris]
          Length = 629

 Score = 63.5 bits (153), Expect(2) = 1e-12
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + +S    P +I + + +LR  P  VL F EN+ P+ L I  Y L I   +R PSPK 
Sbjct: 57  FIKHISGELNPTLISNALPNLRSSPDRVLTFIENISPNCLDITCYSLVICILSRLPSPKE 116

Query: 534 ALRLLKDLISSRASNHQEVF 593
           A +LLK +IS+R   H+E F
Sbjct: 117 ATQLLKQVISARVVTHKEFF 136



 Score = 36.6 bits (83), Expect(2) = 1e-12
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 232 HFKSITTISLHFPTHLQAPSPPV-IPITPEILVSSVKSSHWHFIKH 366
           HF ++T       +   APSPP  +PIT   L  SV SS W FIKH
Sbjct: 19  HFSTLTLSK----SKKSAPSPPPPLPITANALRDSVTSSQWQFIKH 60


>ref|XP_009769332.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Nicotiana sylvestris]
          Length = 629

 Score = 63.5 bits (153), Expect(2) = 1e-12
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + +S    P +I + + +LR  P  VL F EN+ P+ L I  Y L I   +R PSPK 
Sbjct: 57  FIKHISGELNPTLISNALPNLRSSPDRVLTFIENISPNCLDITCYSLVICILSRLPSPKE 116

Query: 534 ALRLLKDLISSRASNHQEVF 593
           A +LLK +IS+R   H+E F
Sbjct: 117 ATQLLKQVISARVVTHKEFF 136



 Score = 36.6 bits (83), Expect(2) = 1e-12
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 232 HFKSITTISLHFPTHLQAPSPPV-IPITPEILVSSVKSSHWHFIKH 366
           HF ++T       +   APSPP  +PIT   L  SV SS W FIKH
Sbjct: 19  HFSTLTLSK----SKKSAPSPPPPLPITANALRDSVTSSQWQFIKH 60


>gb|KVH93273.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 524

 Score = 65.5 bits (158), Expect(2) = 2e-12
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + +S    P  I S +Y LR  P +VL F E  +PS+  +E YCL+I+   + PSPK 
Sbjct: 69  FIEYISDTLTPTTISSALYDLRASPDLVLKFTEYFNPSNTDVECYCLSIAIICQLPSPKL 128

Query: 534 ALRLLKDLISSRASNHQEVF 593
           + + +K +ISSR  ++++VF
Sbjct: 129 SSQFIKTVISSRRFSYKDVF 148



 Score = 33.5 bits (75), Expect(2) = 2e-12
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 244 ITTISLHFPTHLQAPSPPVIPITPEILVSSVKSSHWHFIKHYRQT 378
           I+++S+         S  + P+TP+ L  S+  S WHFI++   T
Sbjct: 32  ISSLSISETESTNTKSTHIQPVTPQSLKKSISCSQWHFIEYISDT 76


>emb|CDO97115.1| unnamed protein product [Coffea canephora]
          Length = 647

 Score = 65.9 bits (159), Expect(2) = 8e-12
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = +3

Query: 366 LSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKHALRL 545
           +S +  P +I  T   LR  P ++LNF + L P  L +E YCLAIS  +R PSPK A  L
Sbjct: 74  VSSSLTPKLISCTFLSLRSSPDLILNFIKYLSPQCLNLECYCLAISILSRRPSPKQATEL 133

Query: 546 LKDLISSRASNHQEVF 593
           +K +I SR +   ++F
Sbjct: 134 IKTVICSRIARISDIF 149



 Score = 31.2 bits (69), Expect(2) = 8e-12
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
 Frame = +1

Query: 193 CLYKTQHP*I--------NFSHFKSITTISLHFPTHLQAPSPPVIPITPEILVSSVKSSH 348
           CL + QHP +           H  +++   L  PT   +P+ P   IT + L    KSS 
Sbjct: 9   CLLRLQHPNLIQLSKIAAAHRHNSTLSLSKLGKPTLSASPAAPS-SITSQTLQDYAKSSQ 67

Query: 349 WHFIK 363
           WH IK
Sbjct: 68  WHLIK 72


>ref|XP_008368150.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Malus domestica]
          Length = 634

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 29/80 (36%), Positives = 48/80 (60%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + L PN  P++I   ++ LR  P +VL F  +++   L ++  CLAI+  A+ PSPK 
Sbjct: 64  FIEHLLPNIPPSLISDALFDLRKSPELVLEFISHVEFHRLDVDTRCLAIAIVAQ-PSPKR 122

Query: 534 ALRLLKDLISSRASNHQEVF 593
            L LLK ++ S  ++ +E+F
Sbjct: 123 TLELLKQVVGSGNASVREIF 142



 Score = 39.7 bits (91), Expect(2) = 2e-11
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 274 HLQAPSPPVIPITPEILVSSVKSSHWHFIKH 366
           H  AP+ P+ PIT   L++S+ SS WHFI+H
Sbjct: 37  HPTAPTTPLPPITHHTLLTSIHSSQWHFIEH 67


>ref|XP_008237676.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Prunus mume]
          Length = 630

 Score = 59.3 bits (142), Expect(2) = 2e-11
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + LSPN  P++I   ++ L+  P +VL F  N++   L I+  CLAI+  AR  SP+ 
Sbjct: 59  FIKHLSPNLSPSLISEALFELQKSPQLVLEFISNVEFHRLDIQTRCLAIAIVARQSSPQP 118

Query: 534 ALRLLKDLISSRASNHQEVF 593
           A  LLK ++ S  +  +E+F
Sbjct: 119 AFELLKQVVGSGIATIREIF 138



 Score = 36.2 bits (82), Expect(2) = 2e-11
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +1

Query: 271 THLQAPSPPVIPITPEILVSSVKSSHWHFIKH 366
           TH + P+ P  PIT   L+ +++SS WHFIKH
Sbjct: 32  THPENPTDPP-PITRRSLLKTIQSSQWHFIKH 62


>ref|XP_009342418.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Pyrus x bretschneideri]
          Length = 634

 Score = 56.2 bits (134), Expect(2) = 3e-11
 Identities = 29/80 (36%), Positives = 47/80 (58%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + L PN  P++I   ++ LR  P +VL F  +++   L ++  CLAI+  A+ PSPK 
Sbjct: 64  FIEHLPPNIPPSLISDALFDLRKSPELVLEFISHVEFHRLDVDTRCLAIAIVAQ-PSPKR 122

Query: 534 ALRLLKDLISSRASNHQEVF 593
            L LLK ++ S  +  +E+F
Sbjct: 123 TLELLKQVVGSGNAGVREIF 142



 Score = 38.9 bits (89), Expect(2) = 3e-11
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +1

Query: 172 MKSHNILCLYKTQHP*INFSHFKSITTISLHFPTHLQAPSPPVIPITPEILVSSVKSSHW 351
           +K + +   + T HP          +   L    H  AP+ P  PIT   L++S+ SS W
Sbjct: 12  LKPYKLRPTFPTSHP---------PSAAPLSSVAHPTAPTTPPPPITHHTLLTSIHSSQW 62

Query: 352 HFIKH 366
           HFI+H
Sbjct: 63  HFIEH 67


>ref|XP_012436499.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Gossypium raimondii]
           gi|763780763|gb|KJB47834.1| hypothetical protein
           B456_008G044300 [Gossypium raimondii]
          Length = 631

 Score = 52.8 bits (125), Expect(2) = 3e-10
 Identities = 30/80 (37%), Positives = 45/80 (56%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + LSPN   ++I + + +L   P + L F  +++   L I+  CLAI+ A+R PSPK 
Sbjct: 59  FIKHLSPNLDSSLISTVLLNLHKTPELALQFTSHVEFHRLDIKTRCLAIAVASRLPSPKP 118

Query: 534 ALRLLKDLISSRASNHQEVF 593
            L LLK  +SS  +    VF
Sbjct: 119 TLNLLKRTVSSDIAGVAVVF 138



 Score = 39.3 bits (90), Expect(2) = 3e-10
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +1

Query: 172 MKSHNILCLYKTQHP*INFSHFKSI-TTISLHFPTHLQAPSPPVIPITPEILVSSVKSSH 348
           MK + IL  ++   P I   H +S+ + +S       Q+PS     I+P++LV S +SS 
Sbjct: 1   MKPYKIL-KHQNPKPFILIPHQRSLFSALSSSTSDRSQSPSSE---ISPDVLVESARSSQ 56

Query: 349 WHFIKH 366
           WHFIKH
Sbjct: 57  WHFIKH 62


>ref|XP_004292464.2| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 647

 Score = 50.4 bits (119), Expect(2) = 6e-10
 Identities = 27/80 (33%), Positives = 42/80 (52%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F Q L PN   +++  T++ L   P +V  F  + D   L  +  CLA +  A  PSPK 
Sbjct: 76  FIQHLPPNLPSSLVSQTLFSLHQTPHLVHRFTSHFDLRRLDTDTQCLAAAILAALPSPKP 135

Query: 534 ALRLLKDLISSRASNHQEVF 593
           ++ LLK L+ S  +  ++VF
Sbjct: 136 SIALLKQLLGSGIAPIRDVF 155



 Score = 40.4 bits (93), Expect(2) = 6e-10
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = +1

Query: 160 TAIAMKSHNILCLYKTQHP*INFSHFKSITTISLHFPTHLQAPSPPVIPITPEILVSSVK 339
           +A  MK H +L  + T  P    S F S+T  S         P PP  PIT   L++S++
Sbjct: 21  SARTMKPHRLLNPH-TLKPQNLRSPFSSLTQPS---------PPPPPPPITHLSLLNSIQ 70

Query: 340 SSHWHFIKH 366
           +SHWHFI+H
Sbjct: 71  TSHWHFIQH 79


>ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329752|gb|EFH60171.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 623

 Score = 52.4 bits (124), Expect(2) = 9e-10
 Identities = 23/80 (28%), Positives = 48/80 (60%)
 Frame = +3

Query: 354 FHQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKH 533
           F + ++   IP+++ +T+  L   P +  NF  ++D   L  +  CLAI+  ++  SPK 
Sbjct: 62  FIEHVTDKLIPSLVSTTLLSLVKTPDLAFNFVNHIDLRCLDFQTQCLAIAVVSKLSSPKS 121

Query: 534 ALRLLKDLISSRASNHQEVF 593
             +LLK+++S+R ++ +++F
Sbjct: 122 VTQLLKEVVSTRKNSVRDLF 141



 Score = 37.7 bits (86), Expect(2) = 9e-10
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +1

Query: 304 PITPEILVSSVKSSHWHFIKH 366
           PIT E+L+ S+KSS WHFI+H
Sbjct: 45  PITSEVLLESIKSSQWHFIEH 65


>ref|XP_007041360.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590682507|ref|XP_007041361.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|590682510|ref|XP_007041362.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590682513|ref|XP_007041363.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|590682516|ref|XP_007041364.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590682524|ref|XP_007041366.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508705295|gb|EOX97191.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508705296|gb|EOX97192.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|508705297|gb|EOX97193.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508705298|gb|EOX97194.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508705299|gb|EOX97195.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|508705301|gb|EOX97197.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 650

 Score = 48.9 bits (115), Expect(2) = 1e-08
 Identities = 27/79 (34%), Positives = 45/79 (56%)
 Frame = +3

Query: 357 HQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKHA 536
           HQ+   N  P++I + + +L   P + L F  +++   L ++  CLAI+ A+R PSPK  
Sbjct: 81  HQSSDLN--PSVISTVLLNLHKTPELALQFTSHIEFQRLDVKTRCLAIAVASRLPSPKPT 138

Query: 537 LRLLKDLISSRASNHQEVF 593
           L+LLK  I S  ++   +F
Sbjct: 139 LQLLKQTIYSDIASVTVIF 157



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +1

Query: 307 ITPEILVSSVKSSHWHFIKH 366
           I+PE+L+ SV+SS WHFIKH
Sbjct: 62  ISPELLIESVRSSQWHFIKH 81


>ref|XP_007041365.1| Pentatricopeptide repeat superfamily protein isoform 6 [Theobroma
           cacao] gi|508705300|gb|EOX97196.1| Pentatricopeptide
           repeat superfamily protein isoform 6 [Theobroma cacao]
          Length = 494

 Score = 48.9 bits (115), Expect(2) = 1e-08
 Identities = 27/79 (34%), Positives = 45/79 (56%)
 Frame = +3

Query: 357 HQTLSPNFIPAIIDSTIYHLRLFPGIVLNFFENLDPSSLTIEFYCLAISFAARFPSPKHA 536
           HQ+   N  P++I + + +L   P + L F  +++   L ++  CLAI+ A+R PSPK  
Sbjct: 81  HQSSDLN--PSVISTVLLNLHKTPELALQFTSHIEFQRLDVKTRCLAIAVASRLPSPKPT 138

Query: 537 LRLLKDLISSRASNHQEVF 593
           L+LLK  I S  ++   +F
Sbjct: 139 LQLLKQTIYSDIASVTVIF 157



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +1

Query: 307 ITPEILVSSVKSSHWHFIKH 366
           I+PE+L+ SV+SS WHFIKH
Sbjct: 62  ISPELLIESVRSSQWHFIKH 81