BLASTX nr result

ID: Rehmannia27_contig00053254 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00053254
         (696 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ13712.1| putative zinc finger protein [Capsicum chinense]       57   1e-06
ref|XP_009621500.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...    55   9e-06
ref|XP_012852611.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 ...    55   9e-06

>emb|CAJ13712.1| putative zinc finger protein [Capsicum chinense]
          Length = 220

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +2

Query: 257 GMGKTPTDPRSKPVQGVVLIPSRPAGVGPQTAPSFEANNFDNIG 388
           G G+T TDPRSKP+ G+  IPSRPAG  P+TAP  E NNF N+G
Sbjct: 82  GRGRTFTDPRSKPIPGLE-IPSRPAGQRPETAPQPEPNNFPNLG 124


>ref|XP_009621500.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Nicotiana
           tomentosiformis] gi|697134910|ref|XP_009621502.1|
           PREDICTED: E3 ubiquitin-protein ligase RNF185-like
           [Nicotiana tomentosiformis]
           gi|697134912|ref|XP_009621503.1| PREDICTED: E3
           ubiquitin-protein ligase RNF185-like [Nicotiana
           tomentosiformis] gi|697134914|ref|XP_009621504.1|
           PREDICTED: E3 ubiquitin-protein ligase RNF185-like
           [Nicotiana tomentosiformis]
          Length = 220

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = +2

Query: 257 GMGKTPTDPRSKPVQGVVLIPSRPAGVGPQTAPSFEANNFDNIG 388
           G G+T TDPRSKP+ G+  IP+RPAG  P+TAP  ++NN  N+G
Sbjct: 82  GRGRTSTDPRSKPISGLE-IPNRPAGQRPETAPQPQSNNIPNLG 124


>ref|XP_012852611.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 [Erythranthe guttata]
           gi|848855498|ref|XP_012852618.1| PREDICTED: E3
           ubiquitin-protein ligase RNF5 [Erythranthe guttata]
          Length = 221

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = +2

Query: 257 GMGKTPTDPRSKPVQGVVLIPSRPAGVGPQTA-PSFEANNFDNI 385
           G GKTPTDPRSKPV GV  IP+RPAG  P TA P    NNF N+
Sbjct: 84  GRGKTPTDPRSKPVPGVE-IPNRPAGQRPDTAPPPLSDNNFSNV 126


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