BLASTX nr result
ID: Rehmannia27_contig00052939
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00052939
(708 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089647.1| PREDICTED: pentatricopeptide repeat-containi... 330 e-104
ref|XP_010243450.1| PREDICTED: pentatricopeptide repeat-containi... 241 8e-71
emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera] 233 3e-68
ref|XP_010645291.1| PREDICTED: pentatricopeptide repeat-containi... 233 5e-68
ref|XP_012833515.1| PREDICTED: pentatricopeptide repeat-containi... 230 4e-67
emb|CBI35592.3| unnamed protein product [Vitis vinifera] 223 2e-64
ref|XP_008382589.1| PREDICTED: pentatricopeptide repeat-containi... 208 1e-58
ref|XP_009372209.1| PREDICTED: pentatricopeptide repeat-containi... 206 6e-58
emb|CDY34907.1| BnaA01g32380D [Brassica napus] 180 6e-49
ref|XP_009124400.1| PREDICTED: pentatricopeptide repeat-containi... 180 1e-48
ref|XP_013748620.1| PREDICTED: pentatricopeptide repeat-containi... 180 1e-48
ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp.... 178 6e-48
ref|XP_013616506.1| PREDICTED: pentatricopeptide repeat-containi... 177 8e-48
gb|KFK38187.1| hypothetical protein AALP_AA3G080500 [Arabis alpina] 175 8e-47
ref|XP_010524658.1| PREDICTED: pentatricopeptide repeat-containi... 175 8e-47
ref|XP_010450862.1| PREDICTED: pentatricopeptide repeat-containi... 172 3e-46
ref|XP_010450791.1| PREDICTED: pentatricopeptide repeat-containi... 172 3e-46
ref|XP_010464348.1| PREDICTED: pentatricopeptide repeat-containi... 172 4e-46
ref|XP_010450727.1| PREDICTED: pentatricopeptide repeat-containi... 172 5e-46
ref|XP_010464347.1| PREDICTED: pentatricopeptide repeat-containi... 172 7e-46
>ref|XP_011089647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Sesamum indicum]
Length = 892
Score = 330 bits (845), Expect = e-104
Identities = 166/258 (64%), Positives = 193/258 (74%), Gaps = 23/258 (8%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYTILVDGLCRAG+ +++LKMLELMKQA CPPNVYTY+I+I GLC+SGK EDAE LL
Sbjct: 577 SVVTYTILVDGLCRAGEMDSALKMLELMKQAGCPPNVYTYTIVIKGLCQSGKLEDAEKLL 636
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
IEMQ A+SPN IIYA+L+ S+V AGRLN AF +V M Q+GCR N +Y +LL GI L
Sbjct: 637 IEMQNAAVSPNVIIYAILVKSYVIAGRLNHAFNVVNAMFQDGCRANTHVYSALLVGILEL 696
Query: 362 DF-----------------------FRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFL 472
+ KF+FM+MDIYHAF+LL++I ECGGQ DAYKFL
Sbjct: 697 EMDGSTRAQNSSTALNAEMEIGVNCCPKFTFMKMDIYHAFQLLNKIRECGGQPFDAYKFL 756
Query: 473 ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGC 652
I GL TGRISEAD LIQEMV +GL+PDSDI CII HFC+++DY LEWI RF AYGC
Sbjct: 757 IMGLAGTGRISEADILIQEMVTYGLSPDSDISSCIITHFCKNNDYSHCLEWITRFHAYGC 816
Query: 653 VPSFSSYSAVIVGLQNEG 706
PSF+SYSAVIVGLQNEG
Sbjct: 817 DPSFASYSAVIVGLQNEG 834
Score = 108 bits (271), Expect = 1e-23
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Frame = +2
Query: 8 VTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIE 187
VTY L++G C+ G + ++L +M++ C PN+ TY+ +++GLCK G+ A LL +
Sbjct: 369 VTYNALINGYCKEGRVVCAFELLGVMERKKCKPNIRTYNELMEGLCKIGRPYKAVELLRK 428
Query: 188 MQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDF 367
+ N + P E+ + +LID AG LN AFEI+ +M G PN+ Y +D
Sbjct: 429 IINNGLLPTEVTFNILIDGFCRAGELNMAFEILHSMSSYGIEPNHFSY------TMFIDS 482
Query: 368 FRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMV---- 535
K +E ++ + I G T+ A LI G C+TG + A L +EMV
Sbjct: 483 LCKMERLEQAGGFLGVMIKKGISLGEVTLTA---LIDGYCKTGNLKHAFLLFEEMVKNRR 539
Query: 536 -------------------------------KFGLTPDSDICDCIILHFCESDDYKRSLE 622
K GL P ++ C + + +L+
Sbjct: 540 LTSPHTFNIFLDVLGKEVKLDEVNAVFGYMLKHGLVPSVVTYTILVDGLCRAGEMDSALK 599
Query: 623 WIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+E GC P+ +Y+ VI GL G
Sbjct: 600 MLELMKQAGCPPNVYTYTIVIKGLCQSG 627
Score = 105 bits (263), Expect = 1e-22
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ C G + + +L+ M + C PNV+TY++++D LC+ GK E A +
Sbjct: 297 SARTYTVLIKATCDRGLIDQAFCLLDEMIKKGCKPNVHTYTVLVDVLCREGKMEQANGMF 356
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K SP + Y LI+ + GR+ AFE++ M + C+PN + Y L+ G+ +
Sbjct: 357 KKMLKGGFSPGTVTYNALINGYCKEGRVVCAFELLGVMERKKCKPNIRTYNELMEGLCKI 416
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A +LL +II G T + LI G CR G ++ A ++ M
Sbjct: 417 G----------RPYKAVELLRKIINNGLLPTEVTFNILIDGFCRAGELNMAFEILHSMSS 466
Query: 539 FGLTPD 556
+G+ P+
Sbjct: 467 YGIEPN 472
Score = 103 bits (257), Expect = 7e-22
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 2/230 (0%)
Frame = +2
Query: 11 TYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEM 190
TY+ILV GLC AG + + K+ E M + C P+ TY+++I C G + A LL EM
Sbjct: 265 TYSILVHGLCEAGRLDEACKLKEDMSERGCEPSARTYTVLIKATCDRGLIDQAFCLLDEM 324
Query: 191 QKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFF 370
K PN Y +L+D G++ +A + + ML+ G P Y +L+ G
Sbjct: 325 IKKGCKPNVHTYTVLVDVLCREGKMEQANGMFKKMLKGGFSPGTVTYNALINGY------ 378
Query: 371 RKFSFMEMDIYHAFKLLDRI--IECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFG 544
E + AF+LL + +C + Y L+ GLC+ GR +A L+++++ G
Sbjct: 379 ----CKEGRVVCAFELLGVMERKKC-KPNIRTYNELMEGLCKIGRPYKAVELLRKIINNG 433
Query: 545 LTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
L P + +I FC + + + E + +YG P+ SY+ I L
Sbjct: 434 LLPTEVTFNILIDGFCRAGELNMAFEILHSMSSYGIEPNHFSYTMFIDSL 483
Score = 82.4 bits (202), Expect = 1e-14
Identities = 57/233 (24%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S + Y +V+ LC+ G A+ + + + +VY ++ ++ G C++G+ +A +
Sbjct: 191 SGIDYRTVVNALCKNGFVQAAEMFVSSVLKLGYALDVYIHTSLVLGNCRAGELGEAFRVF 250
Query: 182 IEMQKNAI-SPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFM 358
M + + N Y++L+ AGRL+ A ++ M + GC P+ + Y L+
Sbjct: 251 ALMSEGDVCGVNSATYSILVHGLCEAGRLDEACKLKEDMSERGCEPSARTYTVLI----- 305
Query: 359 LDFFRKFSFMEMDIYHAFKLLDRIIECGGQ-TVDAYKFLITGLCRTGRISEADTLIQEMV 535
K + I AF LLD +I+ G + V Y L+ LCR G++ +A+ + ++M+
Sbjct: 306 -----KATCDRGLIDQAFCLLDEMIKKGCKPNVHTYTVLVDVLCREGKMEQANGMFKKML 360
Query: 536 KFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
K G +P + + +I +C+ + E + C P+ +Y+ ++ GL
Sbjct: 361 KGGFSPGTVTYNALINGYCKEGRVVCAFELLGVMERKKCKPNIRTYNELMEGL 413
>ref|XP_010243450.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Nelumbo nucifera]
gi|720085209|ref|XP_010243451.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Nelumbo nucifera]
gi|720085212|ref|XP_010243452.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Nelumbo nucifera]
gi|720085215|ref|XP_010243453.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Nelumbo nucifera]
Length = 900
Score = 241 bits (615), Expect = 8e-71
Identities = 122/261 (46%), Positives = 167/261 (63%), Gaps = 26/261 (9%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+VVTYTI+VDGLCRAG+ +SL +LE MKQA CPPNVYTY+++I GLC++G+ E+AENLL
Sbjct: 583 TVVTYTIVVDGLCRAGNITSSLNVLETMKQAGCPPNVYTYTVLISGLCQNGRVEEAENLL 642
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+ M + PN + Y +L+ +HV AG+L+RAF+IV M ++GCRP+ +IY +LL G+ +
Sbjct: 643 LSMSSLGVDPNHVTYTVLVKAHVKAGKLDRAFDIVSIMFKDGCRPSCRIYHALLKGLLLS 702
Query: 362 --------------------------DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAY 463
F F E+DI HAFKL DR+ +C G T D Y
Sbjct: 703 SNRIREEVIPTNDLGSRALPLEENGGQCFSDDVFREVDIDHAFKLRDRLEKCCGITSDMY 762
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
LI GLC+ GRI EAD+LIQ+MVK GL P+ +C +I H+C + LE++ L
Sbjct: 763 NLLIMGLCKEGRILEADSLIQDMVKRGLFPNKAVCSSLIEHYCRYHRFDHCLEFLNLMLD 822
Query: 644 YGCVPSFSSYSAVIVGLQNEG 706
G +PS SSY ++I GL+NEG
Sbjct: 823 NGSIPSVSSYYSLIHGLRNEG 843
Score = 124 bits (312), Expect = 4e-29
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 27/261 (10%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC + T+ +L +L M C PNV+TY+I+ID LC+ G+ E A+N+
Sbjct: 303 STHTYTVLIKALCDSRSTDKALSLLNEMVGKGCKPNVHTYTILIDKLCREGRLEVADNMF 362
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M + + P I + LI+ + G + AFE++ M + CRPN + Y L+ G+ +
Sbjct: 363 KKMXDDGLFPTVITFNALINGYCKEGFVVSAFELLSMMEKRNCRPNMRTYNELIEGLCRV 422
Query: 362 DFFRKFSFM-------------------------EMDIYHAFKLLDRIIECGGQTVDAYK 466
+ K + + E + AF + + + G + D++
Sbjct: 423 NMSYKATLLLRRIINNGLWPNLITYNILVDGFCKEGNFDMAFNVFNSMSSIGLE-ADSFT 481
Query: 467 F--LITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFL 640
F LI G C+ G++ +A+ L+ EM+K G++PD +I +C+ D + ER
Sbjct: 482 FTTLINGFCKHGKLEKANGLLCEMLKKGISPDEVTYTALIDAYCKISDIGSAFAIFERMT 541
Query: 641 AYGCVPSFSSYSAVIVGLQNE 703
+GC P++ ++++ I L E
Sbjct: 542 EHGCPPTYHTFNSFIDALGKE 562
Score = 113 bits (282), Expect = 4e-25
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 27/258 (10%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+++TY ILVDG C+ G+ + + + M + +T++ +I+G CK GK E A LL
Sbjct: 443 NLITYNILVDGFCKEGNFDMAFNVFNSMSSIGLEADSFTFTTLINGFCKHGKLEKANGLL 502
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGI--- 352
EM K ISP+E+ Y LID++ + AF I M ++GC P + S + +
Sbjct: 503 CEMLKKGISPDEVTYTALIDAYCKISDIGSAFAIFERMTEHGCPPTYHTFNSFIDALGKE 562
Query: 353 -------FMLDFFRKFSFMEMDIYHAFKLLDRIIECGGQT-----------------VDA 460
M K+ + + + ++D + G T V
Sbjct: 563 NKQLEEHAMFGKMLKYGIVPTVVTYTI-VVDGLCRAGNITSSLNVLETMKQAGCPPNVYT 621
Query: 461 YKFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFL 640
Y LI+GLC+ GR+ EA+ L+ M G+ P+ ++ ++ R+ + +
Sbjct: 622 YTVLISGLCQNGRVEEAENLLLSMSSLGVDPNHVTYTVLVKAHVKAGKLDRAFDIVSIMF 681
Query: 641 AYGCVPSFSSYSAVIVGL 694
GC PS Y A++ GL
Sbjct: 682 KDGCRPSCRIYHALLKGL 699
Score = 97.8 bits (242), Expect = 7e-20
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 30/265 (11%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V+T+ L++G C+ G ++ ++L +M++ NC PN+ TY+ +I+GLC+ A LL
Sbjct: 373 TVITFNALINGYCKEGFVVSAFELLSMMEKRNCRPNMRTYNELIEGLCRVNMSYKATLLL 432
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIF-- 355
+ N + PN I Y +L+D G + AF + +M G ++ + +L+ G
Sbjct: 433 RRIINNGLWPNLITYNILVDGFCKEGNFDMAFNVFNSMSSIGLEADSFTFTTLINGFCKH 492
Query: 356 ---------------------------MLDFFRKFSFMEMDIYHAFKLLDRIIECG-GQT 451
++D + K S DI AF + +R+ E G T
Sbjct: 493 GKLEKANGLLCEMLKKGISPDEVTYTALIDAYCKIS----DIGSAFAIFERMTEHGCPPT 548
Query: 452 VDAYKFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIE 631
+ I L + + E + +M+K+G+ P ++ C + + SL +E
Sbjct: 549 YHTFNSFIDALGKENKQLEEHAMFGKMLKYGIVPTVVTYTIVVDGLCRAGNITSSLNVLE 608
Query: 632 RFLAYGCVPSFSSYSAVIVGLQNEG 706
GC P+ +Y+ +I GL G
Sbjct: 609 TMKQAGCPPNVYTYTVLISGLCQNG 633
Score = 90.1 bits (222), Expect = 3e-17
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 1/228 (0%)
Frame = +2
Query: 14 YTILVDGLCRAGDTNASLKMLELMK-QANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEM 190
YT LV G CR D + + ++ ELM + C PN TYS++I GLC++G+ +A + EM
Sbjct: 236 YTSLVLGYCRLTDLSEAFRVFELMSDEEGCRPNSVTYSVLIHGLCEAGRLAEAFQMQQEM 295
Query: 191 QKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFF 370
K P+ Y +LI + + ++A ++ M+ GC+PN
Sbjct: 296 IKKGCEPSTHTYTVLIKALCDSRSTDKALSLLNEMVGKGCKPN----------------- 338
Query: 371 RKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
V Y LI LCR GR+ AD + ++M GL
Sbjct: 339 ---------------------------VHTYTILIDKLCREGRLEVADNMFKKMXDDGLF 371
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
P + +I +C+ + E + C P+ +Y+ +I GL
Sbjct: 372 PTVITFNALINGYCKEGFVVSAFELLSMMEKRNCRPNMRTYNELIEGL 419
>emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 233 bits (595), Expect = 3e-68
Identities = 126/262 (48%), Positives = 164/262 (62%), Gaps = 27/262 (10%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVT+TIL++G CRAG+T SLKMLE MKQA C PNVYTY+III+GLC +G+ E+AE +L
Sbjct: 513 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 572
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M +SPN YA+L+ +HV AGRL+RAF+IV TM++NGC+PN+ IY +LL+G +
Sbjct: 573 FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 632
Query: 362 ---------------------------DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDA 460
+ F MD+ HA K+ D I +CG T D
Sbjct: 633 NTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL 692
Query: 461 YKFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFL 640
Y FL+ GLC+ GRI EAD L Q+MVK GL PD I II H+C++ Y LE+++ L
Sbjct: 693 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVL 751
Query: 641 AYGCVPSFSSYSAVIVGLQNEG 706
VPSF+SY VI GL+NEG
Sbjct: 752 DNKFVPSFASYCWVIHGLRNEG 773
Score = 111 bits (278), Expect = 1e-24
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ C G T+ ++KML+ M C PNV+TY+I+ID LC+ GK E+A +
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 292
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K+ + P I + LI+ + G + AF+++ M + C+PN + Y L+ G+ +
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVD--AYKFLITGLCRTGRISEADTLIQEMV 535
Y AF LL R+++ G D Y L+ G C+ G+++ A + M
Sbjct: 353 S----------KSYKAFLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 401
Query: 536 KFGLTPDSDICDCIILHFCE 595
GL PD +I C+
Sbjct: 402 SAGLEPDGFTFTALIDGLCK 421
Score = 107 bits (266), Expect = 5e-23
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 26/260 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
++T+ L++G C+ G ++ ++L +M++ NC PN+ TY+ +++GLC+ K A LL
Sbjct: 304 IITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLR 363
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLD 364
+ N + P+ + Y +L+D G+LN AF I +M G P+ + +L+ G+ L
Sbjct: 364 RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 423
Query: 365 FFRKFS---------FMEMDIYHAFKLLDRIIECGG-----------------QTVDAYK 466
+ + + +D L+D + G T +
Sbjct: 424 RLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFN 483
Query: 467 FLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAY 646
+ L + +++EA+ ++ +M+K+GL P +I C + + SL+ +ER
Sbjct: 484 CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQA 543
Query: 647 GCVPSFSSYSAVIVGLQNEG 706
GC P+ +Y+ +I GL N G
Sbjct: 544 GCSPNVYTYTIIINGLCNNG 563
Score = 87.4 bits (215), Expect = 3e-16
Identities = 68/254 (26%), Positives = 109/254 (42%), Gaps = 28/254 (11%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV CR D + ++ E M K+ +C PN TYSI+I GLC++G+ E+A L EM
Sbjct: 167 TSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 226
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIY-------------- 331
+ P+ Y +LI + G ++A +++ M C PN Y
Sbjct: 227 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 286
Query: 332 -----------FSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAYKFL 472
L GI + E + AF+LL ++E G + Y L
Sbjct: 287 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNEL 345
Query: 473 ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGC 652
+ GLCR + +A L++ +V GL PD + ++ FC+ + + G
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 405
Query: 653 VPSFSSYSAVIVGL 694
P +++A+I GL
Sbjct: 406 EPDGFTFTALIDGL 419
>ref|XP_010645291.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X1 [Vitis vinifera]
gi|731434976|ref|XP_010645292.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X1 [Vitis vinifera]
gi|731434980|ref|XP_003634842.2| PREDICTED:
pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X1 [Vitis vinifera]
Length = 899
Score = 233 bits (595), Expect = 5e-68
Identities = 126/262 (48%), Positives = 164/262 (62%), Gaps = 27/262 (10%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVT+TIL++G CRAG+T SLKMLE MKQA C PNVYTY+III+GLC +G+ E+AE +L
Sbjct: 579 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M +SPN YA+L+ +HV AGRL+RAF+IV TM++NGC+PN+ IY +LL+G +
Sbjct: 639 FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 698
Query: 362 ---------------------------DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDA 460
+ F MD+ HA K+ D I +CG T D
Sbjct: 699 NTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL 758
Query: 461 YKFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFL 640
Y FL+ GLC+ GRI EAD L Q+MVK GL PD I II H+C++ Y LE+++ L
Sbjct: 759 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVL 817
Query: 641 AYGCVPSFSSYSAVIVGLQNEG 706
VPSF+SY VI GL+NEG
Sbjct: 818 DNKFVPSFASYCWVIHGLRNEG 839
Score = 111 bits (278), Expect = 1e-24
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ C G T+ ++KML+ M C PNV+TY+I+ID LC+ GK E+A +
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K+ + P I + LI+ + G + AF+++ M + C+PN + Y L+ G+ +
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVD--AYKFLITGLCRTGRISEADTLIQEMV 535
Y AF LL R+++ G D Y L+ G C+ G+++ A + M
Sbjct: 419 S----------KSYKAFLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 467
Query: 536 KFGLTPDSDICDCIILHFCE 595
GL PD +I C+
Sbjct: 468 SAGLEPDGFTFTALIDGLCK 487
Score = 107 bits (266), Expect = 5e-23
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 26/260 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
++T+ L++G C+ G ++ ++L +M++ NC PN+ TY+ +++GLC+ K A LL
Sbjct: 370 IITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLR 429
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLD 364
+ N + P+ + Y +L+D G+LN AF I +M G P+ + +L+ G+ L
Sbjct: 430 RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 489
Query: 365 FFRKFS---------FMEMDIYHAFKLLDRIIECGG-----------------QTVDAYK 466
+ + + +D L+D + G T +
Sbjct: 490 RLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFN 549
Query: 467 FLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAY 646
+ L + +++EA+ ++ +M+K+GL P +I C + + SL+ +ER
Sbjct: 550 CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQA 609
Query: 647 GCVPSFSSYSAVIVGLQNEG 706
GC P+ +Y+ +I GL N G
Sbjct: 610 GCSPNVYTYTIIINGLCNNG 629
Score = 89.4 bits (220), Expect = 6e-17
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 28/254 (11%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV CR D + ++ E M K+ NC PN TYSI+I GLC++G+ E+A L EM
Sbjct: 233 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 292
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIY-------------- 331
+ P+ Y +LI + G ++A +++ M C PN Y
Sbjct: 293 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 352
Query: 332 -----------FSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAYKFL 472
L GI + E + AF+LL ++E G + Y L
Sbjct: 353 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNEL 411
Query: 473 ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGC 652
+ GLCR + +A L++ +V GL PD + ++ FC+ + + G
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471
Query: 653 VPSFSSYSAVIVGL 694
P +++A+I GL
Sbjct: 472 EPDGFTFTALIDGL 485
>ref|XP_012833515.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Erythranthe guttata]
gi|604341284|gb|EYU40636.1| hypothetical protein
MIMGU_mgv1a021322mg [Erythranthe guttata]
Length = 838
Score = 230 bits (587), Expect = 4e-67
Identities = 125/276 (45%), Positives = 161/276 (58%), Gaps = 43/276 (15%)
Frame = +2
Query: 8 VTYTILVDGLCRAGDTNASLKMLELMKQANC----------------------------- 100
V T LV G C+AG ++L + E M + C
Sbjct: 510 VALTALVHGYCKAGKIRSALMLFEEMVKDRCLTSPHTFNVFLDVLGKEVKLVEQNAILGK 569
Query: 101 ------PPNVYTYSIIIDGLCKSGKFEDAENLLIEMQKNAISPNEIIYALLIDSHVAAGR 262
P+V TY+I++DGLC++G E + ++ M++++ PN Y ++I S +G+
Sbjct: 570 MLKHGLVPSVVTYTIMVDGLCRAGDIEASLEMIELMERDSCPPNIYTYTIIIGSLCQSGK 629
Query: 263 LNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFRK--------FSFMEMDIYHAFKL 418
N+AFEIVRTM GCR N+QIYF+LL + RK F F +MDI+HAF+
Sbjct: 630 SNQAFEIVRTMFHKGCRANDQIYFALLTAMT-----RKMGCANRDDFIFTKMDIFHAFRF 684
Query: 419 LDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCES 598
D+I E GG D YKFLITGLCRTGRISE D IQEMVK+GL PDSDIC C I H C+S
Sbjct: 685 FDKIREYGGHAFDVYKFLITGLCRTGRISEGDIFIQEMVKYGLIPDSDICSCAITHLCKS 744
Query: 599 DDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+Y RSLEWI+RF AYG P F+ YS VIVGLQ+EG
Sbjct: 745 GEYTRSLEWIKRFNAYGSFPFFACYSTVIVGLQSEG 780
Score = 107 bits (267), Expect = 3e-23
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ C G + +L +L+ M + C PN +TY+I++D LCK GK E+A +
Sbjct: 298 STRTYTVLIKATCDKGLIDKALILLDEMIKKGCKPNAHTYTILVDMLCKEGKIEEANGMF 357
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K+ I+P + Y LI+ + G + AFE++ M + C+PN + Y L+ G+ ++
Sbjct: 358 RKMLKDGINPGNVTYNALINCYCKEGLVVSAFELLGVMERRQCKPNIRTYNELIEGLCVI 417
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A +LL +++ G T + LI G CR G+I A ++ M
Sbjct: 418 G----------TPYKAMELLRKVVNNGLFPTQVTFNILIVGFCRAGQIEMAFKILHSMSS 467
Query: 539 FGLTPD 556
G+ D
Sbjct: 468 IGIATD 473
Score = 85.9 bits (211), Expect = 9e-16
Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 26/259 (10%)
Frame = +2
Query: 8 VTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIE 187
VTY L++ C+ G ++ ++L +M++ C PN+ TY+ +I+GLC G A LL +
Sbjct: 370 VTYNALINCYCKEGLVVSAFELLGVMERRQCKPNIRTYNELIEGLCVIGTPYKAMELLRK 429
Query: 188 MQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSL--------- 340
+ N + P ++ + +LI AG++ AF+I+ +M G + Y L
Sbjct: 430 VVNNGLFPTQVTFNILIVGFCRAGQIEMAFKILHSMSSIGIATDRFSYTVLVDSLCKMGR 489
Query: 341 --LAGIFMLDFFRKFSFMEM--------------DIYHAFKLLDRIIECGGQT-VDAYKF 469
LAG F+ +K F++ I A L + +++ T +
Sbjct: 490 LELAGFFLGLMIKKGIFIDEVALTALVHGYCKAGKIRSALMLFEEMVKDRCLTSPHTFNV 549
Query: 470 LITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYG 649
+ L + ++ E + ++ +M+K GL P ++ C + D + SLE IE
Sbjct: 550 FLDVLGKEVKLVEQNAILGKMLKHGLVPSVVTYTIMVDGLCRAGDIEASLEMIELMERDS 609
Query: 650 CVPSFSSYSAVIVGLQNEG 706
C P+ +Y+ +I L G
Sbjct: 610 CPPNIYTYTIIIGSLCQSG 628
Score = 83.6 bits (205), Expect = 6e-15
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Frame = +2
Query: 8 VTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL-I 184
+ Y +V+ LC+ G A+ + + + P +VY ++ ++ G C++G+ DA + +
Sbjct: 194 IDYRTVVNALCKNGFVQAAEMFVSRVLKLGFPLDVYIHTSLVLGNCRAGEIGDAYKVFDL 253
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLD 364
+K+ N Y++L+ A RL+ A ++ M GC P+ + Y L+
Sbjct: 254 MSEKDGCGVNSATYSILMHGLCEARRLDEALKLKEEMCVKGCHPSTRTYTVLI------- 306
Query: 365 FFRKFSFMEMDIYHAFKLLDRIIECGGQ-TVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
K + + I A LLD +I+ G + Y L+ LC+ G+I EA+ + ++M+K
Sbjct: 307 ---KATCDKGLIDKALILLDEMIKKGCKPNAHTYTILVDMLCKEGKIEEANGMFRKMLKD 363
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
G+ P + + +I +C+ + E + C P+ +Y+ +I GL
Sbjct: 364 GINPGNVTYNALINCYCKEGLVVSAFELLGVMERRQCKPNIRTYNELIEGL 414
>emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 223 bits (569), Expect = 2e-64
Identities = 126/250 (50%), Positives = 162/250 (64%), Gaps = 15/250 (6%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVT+TIL++G CRAG+T SLKMLE MKQA C PNVYTY+III+GLC +G+ E+AE +L
Sbjct: 579 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFM- 358
M +SPN YA+L+ +HV AGRL+RAF+IV TM++NGC+PN+ IY +LL+G +
Sbjct: 639 FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 698
Query: 359 --------------LDFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTG 496
LD R S E D L + I +CG T D Y FL+ GLC+ G
Sbjct: 699 NTAIGARALSSTGDLD-ARSLSSEEND---NNCLSNEIKKCGVPTEDLYNFLVVGLCKEG 754
Query: 497 RISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYS 676
RI EAD L Q+MVK GL PD I II H+C++ Y LE+++ L VPSF+SY
Sbjct: 755 RIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYC 813
Query: 677 AVIVGLQNEG 706
VI GL+NEG
Sbjct: 814 WVIHGLRNEG 823
Score = 111 bits (278), Expect = 1e-24
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ C G T+ ++KML+ M C PNV+TY+I+ID LC+ GK E+A +
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K+ + P I + LI+ + G + AF+++ M + C+PN + Y L+ G+ +
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVD--AYKFLITGLCRTGRISEADTLIQEMV 535
Y AF LL R+++ G D Y L+ G C+ G+++ A + M
Sbjct: 419 S----------KSYKAFLLLRRVVD-NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 467
Query: 536 KFGLTPDSDICDCIILHFCE 595
GL PD +I C+
Sbjct: 468 SAGLEPDGFTFTALIDGLCK 487
Score = 107 bits (266), Expect = 5e-23
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 26/260 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
++T+ L++G C+ G ++ ++L +M++ NC PN+ TY+ +++GLC+ K A LL
Sbjct: 370 IITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLR 429
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLD 364
+ N + P+ + Y +L+D G+LN AF I +M G P+ + +L+ G+ L
Sbjct: 430 RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 489
Query: 365 FFRKFS---------FMEMDIYHAFKLLDRIIECGG-----------------QTVDAYK 466
+ + + +D L+D + G T +
Sbjct: 490 RLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFN 549
Query: 467 FLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAY 646
+ L + +++EA+ ++ +M+K+GL P +I C + + SL+ +ER
Sbjct: 550 CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQA 609
Query: 647 GCVPSFSSYSAVIVGLQNEG 706
GC P+ +Y+ +I GL N G
Sbjct: 610 GCSPNVYTYTIIINGLCNNG 629
Score = 89.4 bits (220), Expect = 6e-17
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 28/254 (11%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV CR D + ++ E M K+ NC PN TYSI+I GLC++G+ E+A L EM
Sbjct: 233 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 292
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIY-------------- 331
+ P+ Y +LI + G ++A +++ M C PN Y
Sbjct: 293 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 352
Query: 332 -----------FSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAYKFL 472
L GI + E + AF+LL ++E G + Y L
Sbjct: 353 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNEL 411
Query: 473 ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGC 652
+ GLCR + +A L++ +V GL PD + ++ FC+ + + G
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471
Query: 653 VPSFSSYSAVIVGL 694
P +++A+I GL
Sbjct: 472 EPDGFTFTALIDGL 485
>ref|XP_008382589.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Malus domestica]
Length = 903
Score = 208 bits (529), Expect = 1e-58
Identities = 108/263 (41%), Positives = 160/263 (60%), Gaps = 28/263 (10%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYTILVDGLC+ GD +LKML+LM++ + PPNVYTY+++I+GLC +G+ E+AE LL
Sbjct: 584 SVVTYTILVDGLCQTGDIMCALKMLDLMRRTSRPPNVYTYTVVINGLCLNGRVEEAEKLL 643
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M I PN + Y +L+ V AGRL+ AFEI+ M+Q G +PN +IY +LLAG+ +
Sbjct: 644 FSMSDFGIPPNHVTYTVLVKGLVNAGRLDHAFEILSVMVQKGFQPNARIYSALLAGLVLS 703
Query: 362 DFFRK----------------------------FSFMEMDIYHAFKLLDRIIECGGQTVD 457
+ ++ ++F MDI HAF L +++ +CG T+D
Sbjct: 704 NEAKEDACSYMSSTSTDATPLLPKDIDDNCISSYAFKNMDIEHAFSLEEKVRKCGCSTMD 763
Query: 458 AYKFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERF 637
Y F++ GLCR R++EAD +I +++K G+ P +C +I +C+ Y L+++
Sbjct: 764 LYNFVVMGLCREARVAEADXIINKVLKCGVFPQKAVC-ALINSYCKERRYDHCLDFMTTI 822
Query: 638 LAYGCVPSFSSYSAVIVGLQNEG 706
L G VPS SY +VI GL +EG
Sbjct: 823 LNQGFVPSVLSYCSVIQGLYSEG 845
Score = 112 bits (279), Expect = 9e-25
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 71/306 (23%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S T+T+L+ LC G T+ +L +L+ M C PNV+TY+++ID LC+ GK E+A +
Sbjct: 304 STRTFTVLIKALCDIGSTDKALGLLDEMVTKGCKPNVHTYTVLIDRLCREGKIEEANGMF 363
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M + + P + Y LI+ + GR+ AFE++ M + C+PN + Y L+ G+ +
Sbjct: 364 RKMLADELFPGTVTYNALINGYCKEGRVISAFELLGVMEKRLCKPNIRTYNELIEGLCKV 423
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG--------------------------------- 442
Y A LL RI++ G
Sbjct: 424 ----------YKTYKAMFLLKRIVDNGLLPNRVTYNILIDGFCKEGQLGLAFETFKSMSS 473
Query: 443 -GQTVDAYKF--LITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDD--- 604
G D + F LI GLC+ GR A +++ MVK G++PD +I +C++D+
Sbjct: 474 FGIEPDCFSFTALIDGLCKQGRPGNASSILGLMVKKGISPDEVTMTALIDGYCKNDEIGN 533
Query: 605 ----YKRSLE----------------------------WIERFLAYGCVPSFSSYSAVIV 688
+++ +E + + L YG VPS +Y+ ++
Sbjct: 534 ASMLFEKMVEKKKLTTPHTFNCFLDILSKDDKVHAAQAMLGKMLKYGSVPSVVTYTILVD 593
Query: 689 GLQNEG 706
GL G
Sbjct: 594 GLCQTG 599
Score = 88.6 bits (218), Expect = 1e-16
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 26/255 (10%)
Frame = +2
Query: 8 VTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIE 187
VTY IL+DG C+ G + + + M P+ ++++ +IDGLCK G+ +A ++L
Sbjct: 446 VTYNILIDGFCKEGQLGLAFETFKSMSSFGIEPDCFSFTALIDGLCKQGRPGNASSILGL 505
Query: 188 MQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLL-------- 343
M K ISP+E+ LID + + A + M++ + L
Sbjct: 506 MVKKGISPDEVTMTALIDGYCKNDEIGNASMLFEKMVEKKKLTTPHTFNCFLDILSKDDK 565
Query: 344 --AGIFMLDFFRKFSFMEM---------------DIYHAFKLLDRIIECG-GQTVDAYKF 469
A ML K+ + DI A K+LD + V Y
Sbjct: 566 VHAAQAMLGKMLKYGSVPSVVTYTILVDGLCQTGDIMCALKMLDLMRRTSRPPNVYTYTV 625
Query: 470 LITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYG 649
+I GLC GR+ EA+ L+ M FG+ P+ ++ + + E + + G
Sbjct: 626 VINGLCLNGRVEEAEKLLFSMSDFGIPPNHVTYTVLVKGLVNAGRLDHAFEILSVMVQKG 685
Query: 650 CVPSFSSYSAVIVGL 694
P+ YSA++ GL
Sbjct: 686 FQPNARIYSALLAGL 700
Score = 83.2 bits (204), Expect = 8e-15
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELMKQAN-CPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV G CR + ++ ++M +++ C PN TYSI++ G C+ K ++A L EM
Sbjct: 238 TSLVLGNCRESHLQEASRVFDIMSKSHGCEPNSVTYSILVHGYCEIDKLDEAFRLKEEMS 297
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIF------ 355
+ P+ + +LI + G ++A ++ M+ GC+PN Y L+ +
Sbjct: 298 EKGCQPSTRTFTVLIKALCDIGSTDKALGLLDEMVTKGCKPNVHTYTVLIDRLCREGKIE 357
Query: 356 -MLDFFRKFSFMEM------------------DIYHAFKLLDRIIE--CGGQTVDAYKFL 472
FRK E+ + AF+LL ++E + Y L
Sbjct: 358 EANGMFRKMLADELFPGTVTYNALINGYCKEGRVISAFELLG-VMEKRLCKPNIRTYNEL 416
Query: 473 ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGC 652
I GLC+ + +A L++ +V GL P+ + +I FC+ + E + ++G
Sbjct: 417 IEGLCKVYKTYKAMFLLKRIVDNGLLPNRVTYNILIDGFCKEGQLGLAFETFKSMSSFGI 476
Query: 653 VPSFSSYSAVIVGLQNEG 706
P S++A+I GL +G
Sbjct: 477 EPDCFSFTALIDGLCKQG 494
Score = 63.2 bits (152), Expect = 5e-08
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 37/232 (15%)
Frame = +2
Query: 110 VYTYSIIIDGLCKSGKFEDAENLLIEMQK------------------------------- 196
V Y +I+ LCK+G + AE + + K
Sbjct: 199 VIDYRNVINALCKNGFVQSAEMFVCRVLKLGFRLDTHICTSLVLGNCRESHLQEASRVFD 258
Query: 197 -----NAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+ PN + Y++L+ + +L+ AF + M + GC+P+ + + L+ + +
Sbjct: 259 IMSKSHGCEPNSVTYSILVHGYCEIDKLDEAFRLKEEMSEKGCQPSTRTFTVLIKALCDI 318
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQ-TVDAYKFLITGLCRTGRISEADTLIQEMVK 538
K A LLD ++ G + V Y LI LCR G+I EA+ + ++M+
Sbjct: 319 GSTDK----------ALGLLDEMVTKGCKPNVHTYTVLIDRLCREGKIEEANGMFRKMLA 368
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
L P + + +I +C+ + E + C P+ +Y+ +I GL
Sbjct: 369 DELFPGTVTYNALINGYCKEGRVISAFELLGVMEKRLCKPNIRTYNELIEGL 420
>ref|XP_009372209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Pyrus x bretschneideri]
Length = 901
Score = 206 bits (524), Expect = 6e-58
Identities = 109/261 (41%), Positives = 157/261 (60%), Gaps = 26/261 (9%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYTILVDGLC+ GD +LKML+LM++ + PPNVYTY+++I+GLC++G+ E+A LL
Sbjct: 584 SVVTYTILVDGLCQTGDIMCALKMLDLMRRTSRPPNVYTYTVVINGLCRNGRVEEAGKLL 643
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGI--- 352
M I PN + Y +L+ V AGRL+ AFEI+ M+Q G +PN +IY +LLAG+
Sbjct: 644 FSMSDFGIPPNHVTYTVLVKGLVNAGRLDHAFEILSVMVQKGFQPNPRIYSALLAGLVLS 703
Query: 353 ---------FMLDFF--------------RKFSFMEMDIYHAFKLLDRIIECGGQTVDAY 463
FM + ++F MDI HAF L +++ +CG T+D Y
Sbjct: 704 NEAKEDASSFMSSTYATPLLPKDIDDNCISSYAFRNMDIEHAFSLEEKVRKCGCSTMDLY 763
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
F++ GLCR R++EAD +I ++K G+ P +C +I +C Y L+++ L
Sbjct: 764 NFVVMGLCREARLAEADHIINNVLKCGVFPQKAVC-ALINSYCNERRYDHCLDFMTTILN 822
Query: 644 YGCVPSFSSYSAVIVGLQNEG 706
G VPS SY +VI GL +EG
Sbjct: 823 QGFVPSVLSYCSVIQGLYSEG 843
Score = 112 bits (280), Expect = 7e-25
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 71/303 (23%)
Frame = +2
Query: 11 TYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEM 190
T+T+L+ LC G T+ +L +L+ M C PNV+TY+I+ID LC+ GK E+A + +M
Sbjct: 307 TFTVLIKALCDIGSTDKALGLLDEMVTKGCKPNVHTYTILIDRLCREGKIEEANGMFRKM 366
Query: 191 QKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFF 370
+ + P + Y LI+ + GR+ AFE++ M + C+PN + Y L+ G+ +
Sbjct: 367 LADELFPGTVTYNALINGYCKEGRVISAFELLGVMEKRLCKPNIRTYNELIEGLCKV--- 423
Query: 371 RKFSFMEMDIYHAFKLLDRIIECG----------------------------------GQ 448
Y A LL RI++ G G
Sbjct: 424 -------YKTYKAMFLLKRIVDNGLLPNRVTYNILIDGFCKEGQLGLAFETFKSMSSFGI 476
Query: 449 TVDAYKF--LITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDD------ 604
D + F LI GLC+ GR A +++ MVK G++PD +I +C++D+
Sbjct: 477 EPDCFSFTALIDGLCKQGRPGHASSILALMVKKGISPDEVTMTALIDGYCKNDEIGNASM 536
Query: 605 -YKRSLE----------------------------WIERFLAYGCVPSFSSYSAVIVGLQ 697
+++ +E + + L YG VPS +Y+ ++ GL
Sbjct: 537 LFEKMVEKKTLTTPHTFNSFLDVLSKDDKVHAAQAMLGKMLKYGSVPSVVTYTILVDGLC 596
Query: 698 NEG 706
G
Sbjct: 597 QTG 599
Score = 82.8 bits (203), Expect = 1e-14
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELMKQAN-CPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV G CR + ++ ++M +++ C PN TYSI++ G C+ K ++A L EM
Sbjct: 238 TSLVLGNCRESHLQEASRVFDIMSKSHGCEPNSVTYSILVHGYCEIDKLDEAFRLKEEMS 297
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIF------ 355
+ P+ + +LI + G ++A ++ M+ GC+PN Y L+ +
Sbjct: 298 EKGCLPSSRTFTVLIKALCDIGSTDKALGLLDEMVTKGCKPNVHTYTILIDRLCREGKIE 357
Query: 356 -MLDFFRKFSFMEM------------------DIYHAFKLLDRIIE--CGGQTVDAYKFL 472
FRK E+ + AF+LL ++E + Y L
Sbjct: 358 EANGMFRKMLADELFPGTVTYNALINGYCKEGRVISAFELLG-VMEKRLCKPNIRTYNEL 416
Query: 473 ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGC 652
I GLC+ + +A L++ +V GL P+ + +I FC+ + E + ++G
Sbjct: 417 IEGLCKVYKTYKAMFLLKRIVDNGLLPNRVTYNILIDGFCKEGQLGLAFETFKSMSSFGI 476
Query: 653 VPSFSSYSAVIVGLQNEG 706
P S++A+I GL +G
Sbjct: 477 EPDCFSFTALIDGLCKQG 494
Score = 63.2 bits (152), Expect = 5e-08
Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 37/232 (15%)
Frame = +2
Query: 110 VYTYSIIIDGLCKSGKFEDAENLLIEMQK------------------------------- 196
V Y +I+ LCK+G + AE + + K
Sbjct: 199 VIDYRSVINALCKNGFVQSAEMFVCRVLKLGFRLDTHICTSLVLGNCRESHLQEASRVFD 258
Query: 197 -----NAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+ PN + Y++L+ + +L+ AF + M + GC P+++ + L+ + +
Sbjct: 259 IMSKSHGCEPNSVTYSILVHGYCEIDKLDEAFRLKEEMSEKGCLPSSRTFTVLIKALCDI 318
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQ-TVDAYKFLITGLCRTGRISEADTLIQEMVK 538
K A LLD ++ G + V Y LI LCR G+I EA+ + ++M+
Sbjct: 319 GSTDK----------ALGLLDEMVTKGCKPNVHTYTILIDRLCREGKIEEANGMFRKMLA 368
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
L P + + +I +C+ + E + C P+ +Y+ +I GL
Sbjct: 369 DELFPGTVTYNALINGYCKEGRVISAFELLGVMEKRLCKPNIRTYNELIEGL 420
>emb|CDY34907.1| BnaA01g32380D [Brassica napus]
Length = 759
Score = 180 bits (456), Expect = 6e-49
Identities = 98/235 (41%), Positives = 140/235 (59%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LV+GL R+GD + SL+MLE MK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 486 SVVTYTTLVEGLIRSGDVSGSLRMLEAMKSSGCLPNVYPYTIIINGLCRFGRVEEAEKLL 545
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M+ + +SPN + Y +++ +V G+L+RA E V M+ G N ++Y SLL G+ +
Sbjct: 546 ATMRDSGVSPNHVTYTVMVKGYVDNGKLDRALETVSVMVARGYELNERVYSSLLHGLAL- 604
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
KL+ + E GG T Y F++T LC+ GRI E++ LIQ M+K
Sbjct: 605 --------------SQNKLISMVEELGGSTRGVYGFVVTRLCKEGRIDESNELIQTMLKI 650
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
G+ + I D +I +C + + +E I L G VPSF S+ VI GL+ EG
Sbjct: 651 GVYNEKAI-DTVIESYCGRKEQSKCVELITLVLGTGFVPSFRSFCLVIQGLKKEG 704
Score = 105 bits (263), Expect = 1e-22
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 27/237 (11%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S T T+L+ LC G + + M+ C NV+TY+++IDGLC+ GK E+A +
Sbjct: 206 STRTNTVLIKALCDEGLVEKGFTLFDEMRTKGCKANVHTYTVLIDGLCREGKVEEANGVY 265
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M ++ + P+ + Y LI+ + GR+ +AFE++ M + GCRPN + + L+ G+ +
Sbjct: 266 RKMCEDGVYPSVVTYNALINGYCKDGRIVQAFEVLAVMEKRGCRPNVRSFNELMGGLCRV 325
Query: 362 --DFFRKFSFMEM-------DIYHAFKLLDRIIECGGQTVDAYKFL-------------- 472
F + M D+ L+D + G V AYK L
Sbjct: 326 GKPFKAVYLLKRMVGDGLAPDVVSYNVLIDGVCREGFMNV-AYKLLGSMSSFDVEPDCVT 384
Query: 473 ----ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIE 631
I GLC+ G++ A + + MV+ G+ D C +I FC+ K +L +E
Sbjct: 385 FTGMIDGLCKQGKVDVASSFLSLMVRKGIKVDEVTCTVLIDGFCKLGKTKDALFIVE 441
Score = 97.1 bits (240), Expect = 1e-19
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
VV+Y +L+DG+CR G N + K+L M + P+ T++ +IDGLCK GK + A + L
Sbjct: 347 VVSYNVLIDGVCREGFMNVAYKLLGSMSSFDVEPDCVTFTGMIDGLCKQGKVDVASSFLS 406
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTM------------------LQNGC 310
M + I +E+ +LID G+ A IV T+ L GC
Sbjct: 407 LMVRKGIKVDEVTCTVLIDGFCKLGKTKDALFIVETLCKMRLLTTPHSLNVLLDVLSKGC 466
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG-QTVDAYK 466
+ ++ L+ + + D+ + ++L+ + G V Y
Sbjct: 467 KVKEELAMFGKINKLGLVPSVVTYTTLVEGLIRSGDVSGSLRMLEAMKSSGCLPNVYPYT 526
Query: 467 FLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAY 646
+I GLCR GR+ EA+ L+ M G++P+ ++ + ++ R+LE + +A
Sbjct: 527 IIINGLCRFGRVEEAEKLLATMRDSGVSPNHVTYTVMVKGYVDNGKLDRALETVSVMVAR 586
Query: 647 GCVPSFSSYSAVIVGL 694
G + YS+++ GL
Sbjct: 587 GYELNERVYSSLLHGL 602
Score = 74.7 bits (182), Expect = 6e-12
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 2/232 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELMKQANCP-PNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV G CR + +L++ +M + PN TYS +I GLC+ G+ +A M
Sbjct: 140 TSLVLGFCRVLNLGEALRVFNVMSREEVSEPNSVTYSNLIHGLCEVGRLNEAFVFKERMG 199
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ +LI + G + + F + M GC+ N Y L+ G+
Sbjct: 200 EKGCEPSTRTNTVLIKALCDEGLVEKGFTLFDEMRTKGCKANVHTYTVLIDGL------- 252
Query: 374 KFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
E + A + ++ E G +V Y LI G C+ GRI +A ++ M K G
Sbjct: 253 ---CREGKVEEANGVYRKMCEDGVYPSVVTYNALINGYCKDGRIVQAFEVLAVMEKRGCR 309
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P+ + ++ C +++ ++R + G P SY+ +I G+ EG
Sbjct: 310 PNVRSFNELMGGLCRVGKPFKAVYLLKRMVGDGLAPDVVSYNVLIDGVCREG 361
>ref|XP_009124400.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Brassica rapa]
Length = 851
Score = 180 bits (456), Expect = 1e-48
Identities = 98/235 (41%), Positives = 140/235 (59%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LV+GL R+GD + SL+MLE MK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 578 SVVTYTTLVEGLIRSGDVSGSLRMLEAMKSSGCLPNVYPYTIIINGLCRFGRVEEAEKLL 637
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M+ + +SPN + Y +++ +V G+L+RA E V M+ G N ++Y SLL G+ +
Sbjct: 638 ATMRDSGVSPNHVTYTVMVKGYVDNGKLDRALETVSVMVARGYELNERVYSSLLHGLAL- 696
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
KL+ + E GG T Y F++T LC+ GRI E++ LIQ M+K
Sbjct: 697 --------------SQNKLISMVEELGGSTRGVYGFVVTRLCKEGRIDESNELIQTMLKI 742
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
G+ + I D +I +C + + +E I L G VPSF S+ VI GL+ EG
Sbjct: 743 GVYNEKAI-DTVIESYCGRKEQSKCVELITLVLGTGFVPSFRSFCLVIQGLKKEG 796
Score = 108 bits (269), Expect = 2e-23
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 27/237 (11%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S T+T+L+ LC G + + M+ C NV+TY+++IDGLC+ GK E+A +
Sbjct: 298 STRTFTVLIKALCDEGLVEKGFTLFDEMRTKGCKANVHTYTVLIDGLCREGKVEEANGVY 357
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M ++ + P+ + Y LI+ + GR+ +AFE++ M + GCRPN + + L+ G+ +
Sbjct: 358 RKMCEDGVYPSVVTYNALINGYCKDGRIVQAFEVLAVMEKRGCRPNVRSFNELMGGLCRV 417
Query: 362 --DFFRKFSFMEM-------DIYHAFKLLDRIIECGGQTVDAYKFL-------------- 472
F + M D+ L+D + G V AYK L
Sbjct: 418 GKPFKAVYLLKRMVGDGLAPDVVSYNVLIDGVCREGFMNV-AYKLLGSMSSFDVEPDCVT 476
Query: 473 ----ITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIE 631
I GLC+ G++ A + + MV+ G+ D C +I FC+ K +L +E
Sbjct: 477 FTGMIDGLCKQGKVDVASSFLSLMVRKGIKVDEVTCTALIDGFCKLGKTKDALFIVE 533
Score = 96.3 bits (238), Expect = 2e-19
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 26/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
VV+Y +L+DG+CR G N + K+L M + P+ T++ +IDGLCK GK + A + L
Sbjct: 439 VVSYNVLIDGVCREGFMNVAYKLLGSMSSFDVEPDCVTFTGMIDGLCKQGKVDVASSFLS 498
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTM------------------LQNGC 310
M + I +E+ LID G+ A IV T+ L GC
Sbjct: 499 LMVRKGIKVDEVTCTALIDGFCKLGKTKDALFIVETLCKMRLLTTPHSLNVLLDVLSKGC 558
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG-QTVDAYK 466
+ ++ L+ + + D+ + ++L+ + G V Y
Sbjct: 559 KVKEELAMFGKINKLGLVPSVVTYTTLVEGLIRSGDVSGSLRMLEAMKSSGCLPNVYPYT 618
Query: 467 FLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAY 646
+I GLCR GR+ EA+ L+ M G++P+ ++ + ++ R+LE + +A
Sbjct: 619 IIINGLCRFGRVEEAEKLLATMRDSGVSPNHVTYTVMVKGYVDNGKLDRALETVSVMVAR 678
Query: 647 GCVPSFSSYSAVIVGL 694
G + YS+++ GL
Sbjct: 679 GYELNERVYSSLLHGL 694
Score = 80.5 bits (197), Expect = 6e-14
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 2/232 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV G CR + +L++ +M ++ PN TYS +I GLC+ G+ E+A +M
Sbjct: 232 TSLVLGFCRVLNLGEALRVFNVMSREEGSEPNSVTYSNLIHGLCEVGRLEEAFVFKEQMG 291
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ + +LI + G + + F + M GC+ N Y L+ G+
Sbjct: 292 EKGCEPSTRTFTVLIKALCDEGLVEKGFTLFDEMRTKGCKANVHTYTVLIDGL------- 344
Query: 374 KFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
E + A + ++ E G +V Y LI G C+ GRI +A ++ M K G
Sbjct: 345 ---CREGKVEEANGVYRKMCEDGVYPSVVTYNALINGYCKDGRIVQAFEVLAVMEKRGCR 401
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P+ + ++ C +++ ++R + G P SY+ +I G+ EG
Sbjct: 402 PNVRSFNELMGGLCRVGKPFKAVYLLKRMVGDGLAPDVVSYNVLIDGVCREG 453
>ref|XP_013748620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Brassica napus]
Length = 852
Score = 180 bits (456), Expect = 1e-48
Identities = 99/235 (42%), Positives = 141/235 (60%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LV+GL R+GD + SL+MLE MK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 579 SVVTYTTLVEGLIRSGDVSGSLRMLEAMKSSGCLPNVYPYTIIINGLCRFGRVEEAEKLL 638
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
MQ + +SPN + Y +++ +V G+L+RA E V M+ G N ++Y SLL G+ +
Sbjct: 639 ATMQDSGVSPNHVTYTVMVKGYVDNGKLDRALESVSVMVARGYELNERVYSSLLHGLAL- 697
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
KL+ + E GG T + Y F++T LC+ GRI E++ LI+ M+K
Sbjct: 698 --------------SQNKLISMVEELGGSTREVYGFVVTRLCKEGRIDESNELIKTMLKR 743
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
G+ + I D II +C + + +E I L G VPSF S+ VI GL+ EG
Sbjct: 744 GVYNEKAI-DTIIESYCGRKEQTKCVELITLVLGVGFVPSFRSFCLVIQGLKKEG 797
Score = 107 bits (268), Expect = 3e-23
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S T+T+L+ LC G + + M C N +TY+++IDGLC+ GK E+A +
Sbjct: 299 STRTFTVLIKALCDEGLVEKGFILFDEMGTKGCKANAHTYTVLIDGLCRDGKVEEANGVY 358
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M ++ + P+ + Y LI+ + GR+ +AFE++ M + GCRPN + + L+ G+ +
Sbjct: 359 RKMVEDGVYPSVVTYNALINGYCKDGRIVQAFEVLVVMEKRGCRPNVRTFNELMGGLCRV 418
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
+ A LL R++ G V +Y LI G+CR G I+ A L+ M
Sbjct: 419 G----------KPFKAVYLLKRMVGDGLAPDVVSYNVLIDGVCREGFINVAYKLLGSMSS 468
Query: 539 FGLTPDSDICDCIILHFCE 595
FG+ PD II C+
Sbjct: 469 FGIEPDCVTFTGIIDGLCK 487
Score = 97.1 bits (240), Expect = 1e-19
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 26/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
VV+Y +L+DG+CR G N + K+L M P+ T++ IIDGLCK GK + A + L
Sbjct: 440 VVSYNVLIDGVCREGFINVAYKLLGSMSSFGIEPDCVTFTGIIDGLCKQGKVDVARSFLS 499
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTM------------------LQNGC 310
M + I +E+ LID G+ A IV T+ L GC
Sbjct: 500 LMVRKGIKVDEVTCTALIDGFCKLGKTKDALFIVETLCKMRLLTTPHSLNVLLDVLSKGC 559
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG-QTVDAYK 466
+ ++ L+ + + D+ + ++L+ + G V Y
Sbjct: 560 KVKEELAMLGKINKLGLVPSVVTYTTLVEGLIRSGDVSGSLRMLEAMKSSGCLPNVYPYT 619
Query: 467 FLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAY 646
+I GLCR GR+ EA+ L+ M G++P+ ++ + ++ R+LE + +A
Sbjct: 620 IIINGLCRFGRVEEAEKLLATMQDSGVSPNHVTYTVMVKGYVDNGKLDRALESVSVMVAR 679
Query: 647 GCVPSFSSYSAVIVGL 694
G + YS+++ GL
Sbjct: 680 GYELNERVYSSLLHGL 695
Score = 78.2 bits (191), Expect = 4e-13
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELMKQANCP-PNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV G CR + +L++ +M + PN TYS +I GLC+ G+ +A +M
Sbjct: 233 TSLVLGFCRVLNLGEALRVFNVMSREEVSEPNSVTYSNLIHGLCEVGRLNEAFVFKEQMG 292
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
K P+ + +LI + G + + F + M GC+ N Y L+ G+
Sbjct: 293 KKGCEPSTRTFTVLIKALCDEGLVEKGFILFDEMGTKGCKANAHTYTVLIDGL------- 345
Query: 374 KFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
+ + A + +++E G +V Y LI G C+ GRI +A ++ M K G
Sbjct: 346 ---CRDGKVEEANGVYRKMVEDGVYPSVVTYNALINGYCKDGRIVQAFEVLVVMEKRGCR 402
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P+ + ++ C +++ ++R + G P SY+ +I G+ EG
Sbjct: 403 PNVRTFNELMGGLCRVGKPFKAVYLLKRMVGDGLAPDVVSYNVLIDGVCREG 454
Score = 77.0 bits (188), Expect = 1e-12
Identities = 56/231 (24%), Positives = 106/231 (45%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L+ GLCR G ++ +L+ M P+V +Y+++IDG+C+ G A LL
Sbjct: 404 NVRTFNELMGGLCRVGKPFKAVYLLKRMVGDGLAPDVVSYNVLIDGVCREGFINVAYKLL 463
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M I P+ + + +ID G+++ A + M++ G + + +L+ G L
Sbjct: 464 GSMSSFGIEPDCVTFTGIIDGLCKQGKVDVARSFLSLMVRKGIKVDEVTCTALIDGFCKL 523
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
+ F+ ++ +LL T + L+ L + ++ E ++ ++ K
Sbjct: 524 GKTKDALFI-VETLCKMRLL--------TTPHSLNVLLDVLSKGCKVKEELAMLGKINKL 574
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D SL +E + GC+P+ Y+ +I GL
Sbjct: 575 GLVPSVVTYTTLVEGLIRSGDVSGSLRMLEAMKSSGCLPNVYPYTIIINGL 625
>ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 178 bits (451), Expect = 6e-48
Identities = 99/235 (42%), Positives = 143/235 (60%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LVDGL R+GD + S +MLELMK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 580 SVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
MQ + +SPN + Y +++ +V G+L+RA E VR M++ G N++IY SLL G +
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVL- 698
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
+ E D +L+ + + GG T FL+T LC+ GR E++ L+Q ++K
Sbjct: 699 ---SQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKS 755
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
G+ + I D I+ +C + + +E I L G VPSF S+ VI GL+ EG
Sbjct: 756 GVFLEKAI-DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEG 809
Score = 118 bits (295), Expect = 6e-27
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + + + M C PNV+TY+++IDGLC+ GK E+A +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K+ I P+ I Y LI+ + GR+ AFE++ M + C+PN + + L+ G+ +
Sbjct: 360 RKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A LL R+++ G + +Y LI GLCR G ++ A L+ M
Sbjct: 420 G----------KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNS 469
Query: 539 FGLTPDSDICDCIILHFCE 595
F L PD II FC+
Sbjct: 470 FDLEPDCLTFTAIINAFCK 488
Score = 99.0 bits (245), Expect = 3e-20
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ G CR + +LK+ +LM ++ C PN +YSI+I GLC+ G+ E+A L +M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G +++AF + M+ GC+PN Y L+ G+
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGL------- 346
Query: 374 KFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
+ I A + ++++ G +V Y LI G C+ GR+ A L+ M K
Sbjct: 347 ---CRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P+ + ++ C +++ ++R L G P SY+ +I GL EG
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Score = 88.6 bits (218), Expect = 1e-16
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V+Y +L+DGLCR G N + K+L M + P+ T++ II+ CK GK + A L
Sbjct: 441 IVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRT------------------MLQNGC 310
M + IS +E+ LID G+ A I+ T ML GC
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGC 560
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAY 463
+ ++ L+ + DI +F++L+ +++ G V Y
Sbjct: 561 KLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE-LMKLSGCLPNVYPY 619
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
+I GLC+ GR+ EA+ L+ M G++P+ ++ + + R+LE + +
Sbjct: 620 TIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
Query: 644 YGCVPSFSSYSAVIVG 691
G + YS+++ G
Sbjct: 680 RGYELNDRIYSSLLRG 695
Score = 75.1 bits (183), Expect = 4e-12
Identities = 52/231 (22%), Positives = 105/231 (45%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L++GLCR G ++ +L+ M P++ +Y+++IDGLC+ G A LL
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLL 464
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + P+ + + +I++ G+ + A + ML+ G + +L+ G+ +
Sbjct: 465 TSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNV 524
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
R F+ ++ ++L T + ++ L + ++ E ++ ++ K
Sbjct: 525 GKTRDALFI-LETLVKMRML--------TTPHSLNVILDMLSKGCKLKEELAMLGKINKL 575
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D S +E GC+P+ Y+ +I GL
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGL 626
Score = 73.9 bits (180), Expect = 1e-11
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 37/233 (15%)
Frame = +2
Query: 119 YSIIIDGLCKSGKFEDAENLLIEMQK---------------------------------- 196
Y I++ LCK+G E AE + ++ K
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257
Query: 197 --NAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFF 370
+PN + Y++LI GRL AF + M + GC+P+ + Y L+ +
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 371 RKFSFMEMDIYHAFKLLDRIIECGGQ-TVDAYKFLITGLCRTGRISEADTLIQEMVKFGL 547
K AF L D +I G + V Y LI GLCR G+I EA+ + ++MVK G+
Sbjct: 318 DK----------AFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGI 367
Query: 548 TPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P + +I +C+ + E + C P+ +++ ++ GL G
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
>ref|XP_013616506.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Brassica oleracea var. oleracea]
Length = 847
Score = 177 bits (450), Expect = 8e-48
Identities = 100/235 (42%), Positives = 141/235 (60%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LV+GL R+GD + SL MLE MK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 570 SVVTYTTLVEGLIRSGDVSGSLGMLEAMKSSGCLPNVYPYTIIINGLCRFGRLEEAEKLL 629
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
MQ + +SPN + Y +++ +V G+L+RA E V M++ G N ++Y SLL G+ +
Sbjct: 630 AAMQDSGVSPNHVTYTVMVKGYVDNGKLDRALETVSVMVERGYELNERVYSSLLHGLAL- 688
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
+ M KL+ + E GG T Y F++T LC+ GR E++ LIQ M+K
Sbjct: 689 ---SHNACMN-------KLISMVEELGGSTRGVYGFVVTRLCKEGRTDESNELIQTMLKR 738
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
G+ + I D II +C + + +E I L G VPSF S+ VI GL+ EG
Sbjct: 739 GVYIEKAI-DTIIESYCGGKEQSKCVELITLVLGTGFVPSFRSFCLVIQGLKKEG 792
Score = 109 bits (272), Expect = 7e-24
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + + M+ C NV+TY+++IDGLC+ GK E+A +
Sbjct: 290 STRTYTVLIKALCDKGLVEKAFILFDEMRTKGCKANVHTYTVLIDGLCREGKVEEANGVY 349
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M ++ + P+ + Y LI+ + GR+ +AFE++ M + GC+PN + + L+ G+ +
Sbjct: 350 RKMCEDGVYPSVVTYNALINGYCKDGRIVQAFEVLAVMEKRGCKPNVRTFNELMGGLCRV 409
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
+ A LL R++ G V +Y LI G+CR G ++ A L+ M
Sbjct: 410 G----------KPFKAVYLLKRMVGDGLLPDVVSYNVLIDGVCREGFMNVAYKLLGSMSS 459
Query: 539 FGLTPDSDICDCIILHFCE 595
FG+ PD II C+
Sbjct: 460 FGIEPDCVTFTGIIDGLCK 478
Score = 91.3 bits (225), Expect = 1e-17
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
VV+Y +L+DG+CR G N + K+L M P+ T++ IIDGLCK GK + A + L
Sbjct: 431 VVSYNVLIDGVCREGFMNVAYKLLGSMSSFGIEPDCVTFTGIIDGLCKQGKVDVASSFLS 490
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTM------------------LQNGC 310
M + I +E+ LID G+ A I+ T+ L GC
Sbjct: 491 LMIRKGIKVDEVTCTALIDGFCKLGKTRDALFILETLCKMRLLTTPHSLNVLLDVLSKGC 550
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG-QTVDAYK 466
++ L+ + + D+ + +L+ + G V Y
Sbjct: 551 NVKEELAMLGKINKLGLVPSVVTYTTLVEGLIRSGDVSGSLGMLEAMKSSGCLPNVYPYT 610
Query: 467 FLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAY 646
+I GLCR GR+ EA+ L+ M G++P+ ++ + ++ R+LE + +
Sbjct: 611 IIINGLCRFGRLEEAEKLLAAMQDSGVSPNHVTYTVMVKGYVDNGKLDRALETVSVMVER 670
Query: 647 GCVPSFSSYSAVIVGL 694
G + YS+++ GL
Sbjct: 671 GYELNERVYSSLLHGL 686
Score = 82.0 bits (201), Expect = 2e-14
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 2/232 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T LV G CR + +L++ +M ++ PN TYS +I GLC+ G+ ++A +M
Sbjct: 224 TSLVLGFCRVLNLGDALRVFNVMSREEGSEPNSVTYSNLIHGLCEVGRLDEAFVFKEQMG 283
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G + +AF + M GC+ N Y L+ G+
Sbjct: 284 EKGCEPSTRTYTVLIKALCDKGLVEKAFILFDEMRTKGCKANVHTYTVLIDGL------- 336
Query: 374 KFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
E + A + ++ E G +V Y LI G C+ GRI +A ++ M K G
Sbjct: 337 ---CREGKVEEANGVYRKMCEDGVYPSVVTYNALINGYCKDGRIVQAFEVLAVMEKRGCK 393
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P+ + ++ C +++ ++R + G +P SY+ +I G+ EG
Sbjct: 394 PNVRTFNELMGGLCRVGKPFKAVYLLKRMVGDGLLPDVVSYNVLIDGVCREG 445
Score = 77.0 bits (188), Expect = 1e-12
Identities = 57/231 (24%), Positives = 105/231 (45%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L+ GLCR G ++ +L+ M P+V +Y+++IDG+C+ G A LL
Sbjct: 395 NVRTFNELMGGLCRVGKPFKAVYLLKRMVGDGLLPDVVSYNVLIDGVCREGFMNVAYKLL 454
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M I P+ + + +ID G+++ A + M++ G + + +L+ G L
Sbjct: 455 GSMSSFGIEPDCVTFTGIIDGLCKQGKVDVASSFLSLMIRKGIKVDEVTCTALIDGFCKL 514
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
R F+ ++ +LL T + L+ L + + E ++ ++ K
Sbjct: 515 GKTRDALFI-LETLCKMRLL--------TTPHSLNVLLDVLSKGCNVKEELAMLGKINKL 565
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D SL +E + GC+P+ Y+ +I GL
Sbjct: 566 GLVPSVVTYTTLVEGLIRSGDVSGSLGMLEAMKSSGCLPNVYPYTIIINGL 616
>gb|KFK38187.1| hypothetical protein AALP_AA3G080500 [Arabis alpina]
Length = 875
Score = 175 bits (443), Expect = 8e-47
Identities = 97/239 (40%), Positives = 143/239 (59%), Gaps = 4/239 (1%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LV+GL R+GD + SLKMLE+MK C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 583 SVVTYTTLVEGLIRSGDISGSLKMLEMMKLNGCLPNVYPYTIIINGLCQFGRLEEAEKLL 642
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFM- 358
MQ + +SPN + Y +++ +V G+L+ A E VR M++ G N ++Y SLL G +
Sbjct: 643 STMQDSGVSPNHVTYTVMVKGYVNNGKLDSALETVRAMVERGYELNERVYSSLLHGFALS 702
Query: 359 ---LDFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQE 529
+ + + ++D KL+ + + G T FL+T LC+ GR E++ LIQ
Sbjct: 703 QKGIHNSDESTVSDIDHECINKLISTVKQLGCSTTGLSDFLVTRLCKEGRTDESNELIQT 762
Query: 530 MVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
M+K G ++ I D II +C ++ + L+ I L G +PSF S+S VI + EG
Sbjct: 763 MLKSGDFLENSI-DIIIASYCSKKEHTKCLDLITLVLKTGFIPSFKSFSVVIQSFKKEG 820
Score = 114 bits (286), Expect = 1e-25
Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + + M C PN YTY+++IDGLC+ GK E+A +
Sbjct: 303 STRTYTVLIKALCDRGLIEKAFSLFDGMIGIGCKPNGYTYTVLIDGLCRDGKIEEANGIC 362
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K+ + P+ I Y LI+ + GR+ AFE++ M + C+PN + + L+ G+ +
Sbjct: 363 RKMVKDGVFPSVITYNALINGYCKDGRVVPAFELLTVMEKKACKPNVRTFNELMEGLCRV 422
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
+ A LL R+++ G + +Y LI GLCR G +S A L+ +
Sbjct: 423 G----------KPFKAVHLLKRMVDNGLSPDIVSYNVLIDGLCREGHMSVAYKLLSSINS 472
Query: 539 FGLTPDSDICDCIILHFCE 595
F + PDS +I FC+
Sbjct: 473 FDIEPDSLTFTSLIDAFCK 491
Score = 93.6 bits (231), Expect = 2e-18
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 2/232 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ G CR +LK+ ++M ++ +C PN +YS++I GLC+ G+ E+A L +M
Sbjct: 237 TSLLLGYCRGLKLRDALKVFDVMSREGDCAPNSVSYSVLIHGLCEVGRLEEAFGLKEQMC 296
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G + +AF + M+ GC+PN Y L+ G+
Sbjct: 297 EKGCEPSTRTYTVLIKALCDRGLIEKAFSLFDGMIGIGCKPNGYTYTVLIDGL------- 349
Query: 374 KFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
+ I A + ++++ G +V Y LI G C+ GR+ A L+ M K
Sbjct: 350 ---CRDGKIEEANGICRKMVKDGVFPSVITYNALINGYCKDGRVVPAFELLTVMEKKACK 406
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P+ + ++ C +++ ++R + G P SY+ +I GL EG
Sbjct: 407 PNVRTFNELMEGLCRVGKPFKAVHLLKRMVDNGLSPDIVSYNVLIDGLCREG 458
Score = 83.2 bits (204), Expect = 8e-15
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V+Y +L+DGLCR G + + K+L + + P+ T++ +ID CK GK + A L
Sbjct: 444 IVSYNVLIDGLCREGHMSVAYKLLSSINSFDIEPDSLTFTSLIDAFCKQGKADVASAFLG 503
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTM------------------LQNGC 310
M + I+ +E+ LID AG+ A I+ T+ L GC
Sbjct: 504 LMLRKGINLDEVTGTTLIDGFCKAGKTQDALFILETLVKMRILTTPHSLNVLLDVLSKGC 563
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAY 463
+ ++ L+ + + DI + K+L+ +++ G V Y
Sbjct: 564 KVKEELAMFGKISKLGLVPSVVTYTTLVEGLIRSGDISGSLKMLE-MMKLNGCLPNVYPY 622
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
+I GLC+ GR+ EA+ L+ M G++P+ ++ + + +LE + +
Sbjct: 623 TIIINGLCQFGRLEEAEKLLSTMQDSGVSPNHVTYTVMVKGYVNNGKLDSALETVRAMVE 682
Query: 644 YGCVPSFSSYSAVIVG 691
G + YS+++ G
Sbjct: 683 RGYELNERVYSSLLHG 698
Score = 81.6 bits (200), Expect = 3e-14
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L++GLCR G ++ +L+ M P++ +Y+++IDGLC+ G A LL
Sbjct: 408 NVRTFNELMEGLCRVGKPFKAVHLLKRMVDNGLSPDIVSYNVLIDGLCREGHMSVAYKLL 467
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+ I P+ + + LID+ G+ + A + ML+ G I + G ++
Sbjct: 468 SSINSFDIEPDSLTFTSLIDAFCKQGKADVASAFLGLMLRKG------INLDEVTGTTLI 521
Query: 362 DFFRKFSFMEMDIYHAFKLLD-RIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
D F K + ++ L+ RI+ T + L+ L + ++ E + ++ K
Sbjct: 522 DGFCKAGKTQDALFILETLVKMRIL----TTPHSLNVLLDVLSKGCKVKEELAMFGKISK 577
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D SL+ +E GC+P+ Y+ +I GL
Sbjct: 578 LGLVPSVVTYTTLVEGLIRSGDISGSLKMLEMMKLNGCLPNVYPYTIIINGL 629
>ref|XP_010524658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X1 [Tarenaya hassleriana]
gi|729458238|ref|XP_010524659.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X2 [Tarenaya hassleriana]
Length = 882
Score = 175 bits (443), Expect = 8e-47
Identities = 96/248 (38%), Positives = 146/248 (58%), Gaps = 13/248 (5%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVV+YTIL+DGL R+GD + +L+MLELMK A C PNVY+Y++II GLC+ G+ E+AE +L
Sbjct: 583 SVVSYTILIDGLIRSGDISGALRMLELMKLAGCSPNVYSYTVIISGLCQFGRDEEAEKIL 642
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFM- 358
M + + PN + Y +++ ++ AGRL+ A E TM+Q G + N+++Y +LL G +
Sbjct: 643 HAMPEYGVLPNHVTYTVMVKAYANAGRLDHALETASTMVQRGYQLNDRVYSALLKGFVLS 702
Query: 359 ------------LDFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRI 502
+D E+++ ++L +I E G T F++ LC GR
Sbjct: 703 QKQTIECSNENAMDSNSDNVLEEINLGSMYELQAKIEELGCSTSGLCNFMVAQLCTQGRA 762
Query: 503 SEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAV 682
E+ LIQ ++K G+ PD + D +I +C S +Y L+ + L G PSF S+S+V
Sbjct: 763 DESIELIQTLLKRGIFPDKAV-DTVIESYCRSKNYTDCLKLMTDVLKTGFTPSFRSFSSV 821
Query: 683 IVGLQNEG 706
I GLQ EG
Sbjct: 822 IQGLQKEG 829
Score = 117 bits (292), Expect = 2e-26
Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G +L +L+ M C PN +TY+ +IDGLCK GK E+A L
Sbjct: 303 STRTYTVLIKALCDKGLIEKALNLLDEMVAGGCKPNAHTYTDLIDGLCKLGKIEEANGLY 362
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
+M K I P+ + Y LI+ + GR+ A E++ M + C+PN + Y LL G+ +
Sbjct: 363 SKMVKEGIFPSVVTYNALINGYCKDGRIIPAIELLGMMEKRNCKPNLRTYNGLLEGLCRV 422
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A LL R+++ G + ++ LI GLCR G I A L M
Sbjct: 423 G----------KSYKAMLLLKRMVDNGLSPDIVSFNILIDGLCREGHIPLAHKLFTSMDT 472
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
F L D II FC+ + + ++ L G P +++ +I G G
Sbjct: 473 FKLEADCLTFTSIIDAFCKGGKPEVASAFLGLMLKKGIHPDEVTFTTLIDGFCKVG 528
Score = 95.1 bits (235), Expect = 6e-19
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 2/232 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ CR + +L++ ++M + A+C PN TYSI+I GLC+ + E+A L +M+
Sbjct: 237 TSLLLAFCRVLNLGDALRVFDVMSRDASCGPNSVTYSILIHGLCEKDRLEEAFRLKDQMR 296
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G + +A ++ M+ GC+PN Y L+ G+ L
Sbjct: 297 EKGCQPSTRTYTVLIKALCDKGLIEKALNLLDEMVAGGCKPNAHTYTDLIDGLCKLG--- 353
Query: 374 KFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLT 550
I A L ++++ G +V Y LI G C+ GRI A L+ M K
Sbjct: 354 -------KIEEANGLYSKMVKEGIFPSVVTYNALINGYCKDGRIIPAIELLGMMEKRNCK 406
Query: 551 PDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
P+ + ++ C +++ ++R + G P S++ +I GL EG
Sbjct: 407 PNLRTYNGLLEGLCRVGKSYKAMLLLKRMVDNGLSPDIVSFNILIDGLCREG 458
Score = 90.1 bits (222), Expect = 3e-17
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V++ IL+DGLCR G + K+ M + T++ IID CK GK E A L
Sbjct: 444 IVSFNILIDGLCREGHIPLAHKLFTSMDTFKLEADCLTFTSIIDAFCKGGKPEVASAFLG 503
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLD 364
M K I P+E+ + LID G+ A ++ T+++ + SL +LD
Sbjct: 504 LMLKKGIHPDEVTFTTLIDGFCKVGKTKDALFLLETLIKTTFM---ETPHSLNV---VLD 557
Query: 365 FFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVKF 541
RK + F +L ++I+ G G +V +Y LI GL R+G IS A +++ M
Sbjct: 558 VLRK----ACKVKEEFAMLGKMIKFGLGPSVVSYTILIDGLIRSGDISGALRMLELMKLA 613
Query: 542 GLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
G +P+ II C+ + + + + YG +P+ +Y+ ++ N G
Sbjct: 614 GCSPNVYSYTVIISGLCQFGRDEEAEKILHAMPEYGVLPNHVTYTVMVKAYANAG 668
>ref|XP_010450862.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X3 [Camelina sativa]
Length = 764
Score = 172 bits (437), Expect = 3e-46
Identities = 101/244 (41%), Positives = 140/244 (57%), Gaps = 9/244 (3%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LVDGL R+GD + S +MLELMK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 464 SVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQLGRVEEAEKLL 523
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
MQ + ISPN + Y +L+ +V GRL+ A E VR M++ G N++IY LL G +
Sbjct: 524 SAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVERGYELNDRIYSYLLRGYVLS 583
Query: 362 ---------DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEAD 514
+ E D KL+ + + GG T FL+T LC+ GR E++
Sbjct: 584 QKGIHISDESSVSDIALRETDAECINKLISVLEQIGGSTSGLCIFLVTRLCKEGRTDESN 643
Query: 515 TLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
L+Q +K G+ + + D I+ +C + + LE I L G VPSF S+ VI GL
Sbjct: 644 DLVQTTLKNGVFLEKAV-DVIMESYCSKKKHIKCLELITLVLESGYVPSFKSFCQVIQGL 702
Query: 695 QNEG 706
+ EG
Sbjct: 703 KKEG 706
Score = 112 bits (280), Expect = 6e-25
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + +L+ M C PN +TY+++IDGLC+ GK E+A +
Sbjct: 184 STRTYTVLIKALCDRGFIDKAFNLLDEMTARGCKPNAHTYTVLIDGLCRDGKIEEANGVF 243
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + I P+ + Y LI+ + GR+ AFE++ M + C+PN + + L+ G+ +
Sbjct: 244 RNMVIDGIFPSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKPNVRTFNELMEGLCRV 303
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A L+ R+++ G + +Y LI GLCR G ++ A L+ M
Sbjct: 304 G----------KPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLLNLMNS 353
Query: 539 FGLTPDSDICDCIILHFCE 595
F L PD II C+
Sbjct: 354 FDLEPDCLTYTAIINALCK 372
Score = 95.5 bits (236), Expect = 4e-19
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ G CR +LK+ ++M ++ +C PN +YSI+I GLC+ G+ E+A L +M
Sbjct: 118 TSLLLGFCRGLYIRDALKVFDVMSREGSCSPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 177
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G +++AF ++ M GC+PN Y L+ G+ R
Sbjct: 178 EKGCHPSTRTYTVLIKALCDRGFIDKAFNLLDEMTARGCKPNAHTYTVLIDGL-----CR 232
Query: 374 KFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLTP 553
E + ++D I +V Y LI G C+ GR+ A L+ M K P
Sbjct: 233 DGKIEEANGVFRNMVIDGIF----PSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKP 288
Query: 554 DSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+ + ++ C +++ ++R + G P SY+ +I GL EG
Sbjct: 289 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREG 339
Score = 89.0 bits (219), Expect = 8e-17
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 27/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V+Y +L+DGLCR G + K+L LM + P+ TY+ II+ LCK GK A L
Sbjct: 325 IVSYNVLIDGLCREGHMTVAYKLLNLMNSFDLEPDCLTYTAIINALCKHGKANVASAFLG 384
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRT------------------MLQNGC 310
M + AI+ +E+I LID G A I+ T ML C
Sbjct: 385 LMLRKAINLDEVIGTTLIDGFCKVGETRNALYILETLVKMRILTTPHSLNVLLDMLSKDC 444
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAY 463
+ ++ L+ + DI +F++L+ +++ G V Y
Sbjct: 445 KVKEELAVFGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE-LMKLSGCLPNVYPY 503
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
+I GLC+ GR+ EA+ L+ M G++P+ ++ + ++ ++E + +
Sbjct: 504 TIIINGLCQLGRVEEAEKLLSAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVE 563
Query: 644 YGCVPSFSSYSAVIVG 691
G + YS ++ G
Sbjct: 564 RGYELNDRIYSYLLRG 579
Score = 74.7 bits (182), Expect = 6e-12
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L++GLCR G ++ +++ M P++ +Y+++IDGLC+ G A LL
Sbjct: 289 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLL 348
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + P+ + Y +I++ G+ N A + ML+ I + G ++
Sbjct: 349 NLMNSFDLEPDCLTYTAIINALCKHGKANVASAFLGLMLRKA------INLDEVIGTTLI 402
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTV-DAYKFLITGLCRTGRISEADTLIQEMVK 538
D F K + +A +L+ +++ T + L+ L + ++ E + ++ K
Sbjct: 403 DGFCKVG----ETRNALYILETLVKMRILTTPHSLNVLLDMLSKDCKVKEELAVFGKINK 458
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D S +E GC+P+ Y+ +I GL
Sbjct: 459 LGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGL 510
>ref|XP_010450791.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X2 [Camelina sativa]
Length = 779
Score = 172 bits (437), Expect = 3e-46
Identities = 101/244 (41%), Positives = 140/244 (57%), Gaps = 9/244 (3%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LVDGL R+GD + S +MLELMK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 479 SVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQLGRVEEAEKLL 538
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
MQ + ISPN + Y +L+ +V GRL+ A E VR M++ G N++IY LL G +
Sbjct: 539 SAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVERGYELNDRIYSYLLRGYVLS 598
Query: 362 ---------DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEAD 514
+ E D KL+ + + GG T FL+T LC+ GR E++
Sbjct: 599 QKGIHISDESSVSDIALRETDAECINKLISVLEQIGGSTSGLCIFLVTRLCKEGRTDESN 658
Query: 515 TLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
L+Q +K G+ + + D I+ +C + + LE I L G VPSF S+ VI GL
Sbjct: 659 DLVQTTLKNGVFLEKAV-DVIMESYCSKKKHIKCLELITLVLESGYVPSFKSFCQVIQGL 717
Query: 695 QNEG 706
+ EG
Sbjct: 718 KKEG 721
Score = 112 bits (280), Expect = 6e-25
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + +L+ M C PN +TY+++IDGLC+ GK E+A +
Sbjct: 199 STRTYTVLIKALCDRGFIDKAFNLLDEMTARGCKPNAHTYTVLIDGLCRDGKIEEANGVF 258
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + I P+ + Y LI+ + GR+ AFE++ M + C+PN + + L+ G+ +
Sbjct: 259 RNMVIDGIFPSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKPNVRTFNELMEGLCRV 318
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A L+ R+++ G + +Y LI GLCR G ++ A L+ M
Sbjct: 319 G----------KPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLLNLMNS 368
Query: 539 FGLTPDSDICDCIILHFCE 595
F L PD II C+
Sbjct: 369 FDLEPDCLTYTAIINALCK 387
Score = 95.5 bits (236), Expect = 4e-19
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ G CR +LK+ ++M ++ +C PN +YSI+I GLC+ G+ E+A L +M
Sbjct: 133 TSLLLGFCRGLYIRDALKVFDVMSREGSCSPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 192
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G +++AF ++ M GC+PN Y L+ G+ R
Sbjct: 193 EKGCHPSTRTYTVLIKALCDRGFIDKAFNLLDEMTARGCKPNAHTYTVLIDGL-----CR 247
Query: 374 KFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLTP 553
E + ++D I +V Y LI G C+ GR+ A L+ M K P
Sbjct: 248 DGKIEEANGVFRNMVIDGIF----PSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKP 303
Query: 554 DSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+ + ++ C +++ ++R + G P SY+ +I GL EG
Sbjct: 304 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREG 354
Score = 89.0 bits (219), Expect = 8e-17
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 27/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V+Y +L+DGLCR G + K+L LM + P+ TY+ II+ LCK GK A L
Sbjct: 340 IVSYNVLIDGLCREGHMTVAYKLLNLMNSFDLEPDCLTYTAIINALCKHGKANVASAFLG 399
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRT------------------MLQNGC 310
M + AI+ +E+I LID G A I+ T ML C
Sbjct: 400 LMLRKAINLDEVIGTTLIDGFCKVGETRNALYILETLVKMRILTTPHSLNVLLDMLSKDC 459
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAY 463
+ ++ L+ + DI +F++L+ +++ G V Y
Sbjct: 460 KVKEELAVFGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE-LMKLSGCLPNVYPY 518
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
+I GLC+ GR+ EA+ L+ M G++P+ ++ + ++ ++E + +
Sbjct: 519 TIIINGLCQLGRVEEAEKLLSAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVE 578
Query: 644 YGCVPSFSSYSAVIVG 691
G + YS ++ G
Sbjct: 579 RGYELNDRIYSYLLRG 594
Score = 74.7 bits (182), Expect = 6e-12
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L++GLCR G ++ +++ M P++ +Y+++IDGLC+ G A LL
Sbjct: 304 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLL 363
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + P+ + Y +I++ G+ N A + ML+ I + G ++
Sbjct: 364 NLMNSFDLEPDCLTYTAIINALCKHGKANVASAFLGLMLRKA------INLDEVIGTTLI 417
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTV-DAYKFLITGLCRTGRISEADTLIQEMVK 538
D F K + +A +L+ +++ T + L+ L + ++ E + ++ K
Sbjct: 418 DGFCKVG----ETRNALYILETLVKMRILTTPHSLNVLLDMLSKDCKVKEELAVFGKINK 473
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D S +E GC+P+ Y+ +I GL
Sbjct: 474 LGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGL 525
>ref|XP_010464348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial-like isoform X2 [Camelina sativa]
Length = 760
Score = 172 bits (436), Expect = 4e-46
Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 5/240 (2%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LVDGL R+GD + S +M+ELMK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 464 SVVTYTTLVDGLIRSGDISGSFRMVELMKLSGCLPNVYPYTIIINGLCQLGRVEEAEKLL 523
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFM- 358
MQ + ISPN + Y +L+ +V GRL+ A E VR M++ G N++IY SLL G +
Sbjct: 524 SAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVERGYELNDRIYSSLLRGYVLS 583
Query: 359 ---LDFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQ 526
+ + + E D +L+ + + G G T FL+T LC+ GR E++ L+Q
Sbjct: 584 QKGIHISDESTLRETDPECINELISMVEQLGCGSTSGLCIFLVTRLCKEGRTDESNDLVQ 643
Query: 527 EMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+K G+ + + D II +C + + LE I L G VPSF S+ VI GL+ EG
Sbjct: 644 TTLKNGVFLEKAV-DIIIESYCSKKKHIKCLELITLVLESGYVPSFKSFCQVIQGLKKEG 702
Score = 111 bits (277), Expect = 2e-24
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + +L+ M C PN +TY+++IDGLC+ GK E+A +
Sbjct: 184 STRTYTVLIKALCDRGLIDKAFNLLDEMIARGCKPNAHTYTVLIDGLCRDGKVEEANGVF 243
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + I P+ + Y LI+ + GR+ AFE++ M + C+PN + + L+ G+ +
Sbjct: 244 RNMVVDGIFPSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKPNVRTFNELMEGLCRV 303
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A L+ R+++ G + +Y LI GLCR G ++ A L+ M
Sbjct: 304 G----------KPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLLNLMNS 353
Query: 539 FGLTPDSDICDCIILHFCE 595
F L PD II C+
Sbjct: 354 FDLEPDCLTYTAIINALCK 372
Score = 94.7 bits (234), Expect = 8e-19
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 1/231 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ G CR + +LK+ ++M ++ +C PN +YSI+I GLC+ G+ E+A +M
Sbjct: 118 TSLLLGFCRGLYISDALKVFDVMSREGSCSPNSVSYSILIHGLCEVGRLEEAFGFKDQMG 177
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G +++AF ++ M+ GC+PN Y L+ G+ R
Sbjct: 178 EKGCYPSTRTYTVLIKALCDRGLIDKAFNLLDEMIARGCKPNAHTYTVLIDGL-----CR 232
Query: 374 KFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLTP 553
E + ++D I +V Y LI G C+ GR+ A L+ M K P
Sbjct: 233 DGKVEEANGVFRNMVVDGIF----PSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKP 288
Query: 554 DSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+ + ++ C +++ ++R + G P SY+ +I GL EG
Sbjct: 289 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREG 339
Score = 89.0 bits (219), Expect = 8e-17
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V+Y +L+DGLCR G + K+L LM + P+ TY+ II+ LCK GK + A L
Sbjct: 325 IVSYNVLIDGLCREGHMTVAYKLLNLMNSFDLEPDCLTYTAIINALCKHGKADVASAFLG 384
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRT------------------MLQNGC 310
M + I+ +E+ LID G A I+ T ML GC
Sbjct: 385 LMLRKGINLDEVTGTTLIDGFCKVGETRNAMYILETLVQMRILTTPHSLNVLLDMLSKGC 444
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAY 463
+ ++ L+ + DI +F++++ +++ G V Y
Sbjct: 445 KVKEELAVLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMVE-LMKLSGCLPNVYPY 503
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
+I GLC+ GR+ EA+ L+ M G++P+ ++ + ++ ++E + +
Sbjct: 504 TIIINGLCQLGRVEEAEKLLSAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVE 563
Query: 644 YGCVPSFSSYSAVIVG 691
G + YS+++ G
Sbjct: 564 RGYELNDRIYSSLLRG 579
Score = 76.6 bits (187), Expect = 1e-12
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L++GLCR G ++ +++ M P++ +Y+++IDGLC+ G A LL
Sbjct: 289 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLL 348
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + P+ + Y +I++ G+ + A + ML+ G I + G ++
Sbjct: 349 NLMNSFDLEPDCLTYTAIINALCKHGKADVASAFLGLMLRKG------INLDEVTGTTLI 402
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTV-DAYKFLITGLCRTGRISEADTLIQEMVK 538
D F K + +A +L+ +++ T + L+ L + ++ E ++ ++ K
Sbjct: 403 DGFCKVG----ETRNAMYILETLVQMRILTTPHSLNVLLDMLSKGCKVKEELAVLGKINK 458
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D S +E GC+P+ Y+ +I GL
Sbjct: 459 LGLVPSVVTYTTLVDGLIRSGDISGSFRMVELMKLSGCLPNVYPYTIIINGL 510
>ref|XP_010450727.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial isoform X1 [Camelina sativa]
Length = 879
Score = 172 bits (437), Expect = 5e-46
Identities = 101/244 (41%), Positives = 140/244 (57%), Gaps = 9/244 (3%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LVDGL R+GD + S +MLELMK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 579 SVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQLGRVEEAEKLL 638
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
MQ + ISPN + Y +L+ +V GRL+ A E VR M++ G N++IY LL G +
Sbjct: 639 SAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVERGYELNDRIYSYLLRGYVLS 698
Query: 362 ---------DFFRKFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEAD 514
+ E D KL+ + + GG T FL+T LC+ GR E++
Sbjct: 699 QKGIHISDESSVSDIALRETDAECINKLISVLEQIGGSTSGLCIFLVTRLCKEGRTDESN 758
Query: 515 TLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
L+Q +K G+ + + D I+ +C + + LE I L G VPSF S+ VI GL
Sbjct: 759 DLVQTTLKNGVFLEKAV-DVIMESYCSKKKHIKCLELITLVLESGYVPSFKSFCQVIQGL 817
Query: 695 QNEG 706
+ EG
Sbjct: 818 KKEG 821
Score = 112 bits (280), Expect = 6e-25
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + +L+ M C PN +TY+++IDGLC+ GK E+A +
Sbjct: 299 STRTYTVLIKALCDRGFIDKAFNLLDEMTARGCKPNAHTYTVLIDGLCRDGKIEEANGVF 358
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + I P+ + Y LI+ + GR+ AFE++ M + C+PN + + L+ G+ +
Sbjct: 359 RNMVIDGIFPSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKPNVRTFNELMEGLCRV 418
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A L+ R+++ G + +Y LI GLCR G ++ A L+ M
Sbjct: 419 G----------KPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLLNLMNS 468
Query: 539 FGLTPDSDICDCIILHFCE 595
F L PD II C+
Sbjct: 469 FDLEPDCLTYTAIINALCK 487
Score = 95.5 bits (236), Expect = 5e-19
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ G CR +LK+ ++M ++ +C PN +YSI+I GLC+ G+ E+A L +M
Sbjct: 233 TSLLLGFCRGLYIRDALKVFDVMSREGSCSPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 292
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G +++AF ++ M GC+PN Y L+ G+ R
Sbjct: 293 EKGCHPSTRTYTVLIKALCDRGFIDKAFNLLDEMTARGCKPNAHTYTVLIDGL-----CR 347
Query: 374 KFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLTP 553
E + ++D I +V Y LI G C+ GR+ A L+ M K P
Sbjct: 348 DGKIEEANGVFRNMVIDGIF----PSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKP 403
Query: 554 DSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+ + ++ C +++ ++R + G P SY+ +I GL EG
Sbjct: 404 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREG 454
Score = 89.0 bits (219), Expect = 8e-17
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 27/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V+Y +L+DGLCR G + K+L LM + P+ TY+ II+ LCK GK A L
Sbjct: 440 IVSYNVLIDGLCREGHMTVAYKLLNLMNSFDLEPDCLTYTAIINALCKHGKANVASAFLG 499
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRT------------------MLQNGC 310
M + AI+ +E+I LID G A I+ T ML C
Sbjct: 500 LMLRKAINLDEVIGTTLIDGFCKVGETRNALYILETLVKMRILTTPHSLNVLLDMLSKDC 559
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAY 463
+ ++ L+ + DI +F++L+ +++ G V Y
Sbjct: 560 KVKEELAVFGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE-LMKLSGCLPNVYPY 618
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
+I GLC+ GR+ EA+ L+ M G++P+ ++ + ++ ++E + +
Sbjct: 619 TIIINGLCQLGRVEEAEKLLSAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVE 678
Query: 644 YGCVPSFSSYSAVIVG 691
G + YS ++ G
Sbjct: 679 RGYELNDRIYSYLLRG 694
Score = 74.7 bits (182), Expect = 6e-12
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L++GLCR G ++ +++ M P++ +Y+++IDGLC+ G A LL
Sbjct: 404 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLL 463
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + P+ + Y +I++ G+ N A + ML+ I + G ++
Sbjct: 464 NLMNSFDLEPDCLTYTAIINALCKHGKANVASAFLGLMLRKA------INLDEVIGTTLI 517
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTV-DAYKFLITGLCRTGRISEADTLIQEMVK 538
D F K + +A +L+ +++ T + L+ L + ++ E + ++ K
Sbjct: 518 DGFCKVG----ETRNALYILETLVKMRILTTPHSLNVLLDMLSKDCKVKEELAVFGKINK 573
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D S +E GC+P+ Y+ +I GL
Sbjct: 574 LGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGL 625
>ref|XP_010464347.1| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial-like isoform X1 [Camelina sativa]
Length = 877
Score = 172 bits (436), Expect = 7e-46
Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 5/240 (2%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
SVVTYT LVDGL R+GD + S +M+ELMK + C PNVY Y+III+GLC+ G+ E+AE LL
Sbjct: 581 SVVTYTTLVDGLIRSGDISGSFRMVELMKLSGCLPNVYPYTIIINGLCQLGRVEEAEKLL 640
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFM- 358
MQ + ISPN + Y +L+ +V GRL+ A E VR M++ G N++IY SLL G +
Sbjct: 641 SAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVERGYELNDRIYSSLLRGYVLS 700
Query: 359 ---LDFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQ 526
+ + + E D +L+ + + G G T FL+T LC+ GR E++ L+Q
Sbjct: 701 QKGIHISDESTLRETDPECINELISMVEQLGCGSTSGLCIFLVTRLCKEGRTDESNDLVQ 760
Query: 527 EMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+K G+ + + D II +C + + LE I L G VPSF S+ VI GL+ EG
Sbjct: 761 TTLKNGVFLEKAV-DIIIESYCSKKKHIKCLELITLVLESGYVPSFKSFCQVIQGLKKEG 819
Score = 111 bits (277), Expect = 2e-24
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
S TYT+L+ LC G + + +L+ M C PN +TY+++IDGLC+ GK E+A +
Sbjct: 301 STRTYTVLIKALCDRGLIDKAFNLLDEMIARGCKPNAHTYTVLIDGLCRDGKVEEANGVF 360
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + I P+ + Y LI+ + GR+ AFE++ M + C+PN + + L+ G+ +
Sbjct: 361 RNMVVDGIFPSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKPNVRTFNELMEGLCRV 420
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECG-GQTVDAYKFLITGLCRTGRISEADTLIQEMVK 538
Y A L+ R+++ G + +Y LI GLCR G ++ A L+ M
Sbjct: 421 G----------KPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLLNLMNS 470
Query: 539 FGLTPDSDICDCIILHFCE 595
F L PD II C+
Sbjct: 471 FDLEPDCLTYTAIINALCK 489
Score = 94.7 bits (234), Expect = 8e-19
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 1/231 (0%)
Frame = +2
Query: 17 TILVDGLCRAGDTNASLKMLELM-KQANCPPNVYTYSIIIDGLCKSGKFEDAENLLIEMQ 193
T L+ G CR + +LK+ ++M ++ +C PN +YSI+I GLC+ G+ E+A +M
Sbjct: 235 TSLLLGFCRGLYISDALKVFDVMSREGSCSPNSVSYSILIHGLCEVGRLEEAFGFKDQMG 294
Query: 194 KNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFMLDFFR 373
+ P+ Y +LI + G +++AF ++ M+ GC+PN Y L+ G+ R
Sbjct: 295 EKGCYPSTRTYTVLIKALCDRGLIDKAFNLLDEMIARGCKPNAHTYTVLIDGL-----CR 349
Query: 374 KFSFMEMDIYHAFKLLDRIIECGGQTVDAYKFLITGLCRTGRISEADTLIQEMVKFGLTP 553
E + ++D I +V Y LI G C+ GR+ A L+ M K P
Sbjct: 350 DGKVEEANGVFRNMVVDGIF----PSVVTYNALINGYCKDGRVVPAFELLAVMEKRACKP 405
Query: 554 DSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGLQNEG 706
+ + ++ C +++ ++R + G P SY+ +I GL EG
Sbjct: 406 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREG 456
Score = 89.0 bits (219), Expect = 8e-17
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Frame = +2
Query: 5 VVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLLI 184
+V+Y +L+DGLCR G + K+L LM + P+ TY+ II+ LCK GK + A L
Sbjct: 442 IVSYNVLIDGLCREGHMTVAYKLLNLMNSFDLEPDCLTYTAIINALCKHGKADVASAFLG 501
Query: 185 EMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRT------------------MLQNGC 310
M + I+ +E+ LID G A I+ T ML GC
Sbjct: 502 LMLRKGINLDEVTGTTLIDGFCKVGETRNAMYILETLVQMRILTTPHSLNVLLDMLSKGC 561
Query: 311 RPNNQI-------YFSLLAGIFMLDFFRKFSFMEMDIYHAFKLLDRIIECGG--QTVDAY 463
+ ++ L+ + DI +F++++ +++ G V Y
Sbjct: 562 KVKEELAVLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMVE-LMKLSGCLPNVYPY 620
Query: 464 KFLITGLCRTGRISEADTLIQEMVKFGLTPDSDICDCIILHFCESDDYKRSLEWIERFLA 643
+I GLC+ GR+ EA+ L+ M G++P+ ++ + ++ ++E + +
Sbjct: 621 TIIINGLCQLGRVEEAEKLLSAMQDSGISPNHVTYTVLVKGYVDNGRLDCAIETVRAMVE 680
Query: 644 YGCVPSFSSYSAVIVG 691
G + YS+++ G
Sbjct: 681 RGYELNDRIYSSLLRG 696
Score = 76.6 bits (187), Expect = 1e-12
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 SVVTYTILVDGLCRAGDTNASLKMLELMKQANCPPNVYTYSIIIDGLCKSGKFEDAENLL 181
+V T+ L++GLCR G ++ +++ M P++ +Y+++IDGLC+ G A LL
Sbjct: 406 NVRTFNELMEGLCRVGKPYKAVHLMKRMVDNGLSPDIVSYNVLIDGLCREGHMTVAYKLL 465
Query: 182 IEMQKNAISPNEIIYALLIDSHVAAGRLNRAFEIVRTMLQNGCRPNNQIYFSLLAGIFML 361
M + P+ + Y +I++ G+ + A + ML+ G I + G ++
Sbjct: 466 NLMNSFDLEPDCLTYTAIINALCKHGKADVASAFLGLMLRKG------INLDEVTGTTLI 519
Query: 362 DFFRKFSFMEMDIYHAFKLLDRIIECGGQTV-DAYKFLITGLCRTGRISEADTLIQEMVK 538
D F K + +A +L+ +++ T + L+ L + ++ E ++ ++ K
Sbjct: 520 DGFCKVG----ETRNAMYILETLVQMRILTTPHSLNVLLDMLSKGCKVKEELAVLGKINK 575
Query: 539 FGLTPDSDICDCIILHFCESDDYKRSLEWIERFLAYGCVPSFSSYSAVIVGL 694
GL P ++ S D S +E GC+P+ Y+ +I GL
Sbjct: 576 LGLVPSVVTYTTLVDGLIRSGDISGSFRMVELMKLSGCLPNVYPYTIIINGL 627