BLASTX nr result

ID: Rehmannia27_contig00052448 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00052448
         (437 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU38105.1| hypothetical protein Varpa_3932 [Variovorax parad...    64   3e-10
ref|WP_055805767.1| hypothetical protein [Variovorax sp. Root318...    55   6e-07

>gb|ADU38105.1| hypothetical protein Varpa_3932 [Variovorax paradoxus EPS]
          Length = 143

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +3

Query: 303 LKCRTILAFTLVCALVA*-RTAPLYGPSRRALITGEEDEERTVVGQ 437
           +KCR I A  LVCA +A  RTAPLY P+RRAL+T EEDEERT+VGQ
Sbjct: 1   MKCRAIFAAALVCATLAGCRTAPLYEPTRRALVTAEEDEERTIVGQ 46


>ref|WP_055805767.1| hypothetical protein [Variovorax sp. Root318D1]
           gi|945427238|gb|KQU83511.1| hypothetical protein
           ASC78_12730 [Variovorax sp. Root318D1]
          Length = 143

 Score = 55.1 bits (131), Expect = 6e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = +3

Query: 303 LKCRTILAFTLVC-ALVA*RTAPLYGPSRRALITGEEDEERTVVGQ 437
           +K ++I A    C AL A RTAPLY P+RRAL+  EEDEERTVVGQ
Sbjct: 1   MKYQSICAAVFACVALAACRTAPLYEPTRRALVAAEEDEERTVVGQ 46


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