BLASTX nr result

ID: Rehmannia27_contig00052003 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00052003
         (422 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381437.1| hypothetical protein POPTR_0006s12830g [Popu...    56   4e-07

>ref|XP_006381437.1| hypothetical protein POPTR_0006s12830g [Populus trichocarpa]
           gi|550336140|gb|ERP59234.1| hypothetical protein
           POPTR_0006s12830g [Populus trichocarpa]
          Length = 183

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
 Frame = +1

Query: 52  KVVAFVFISL-MTSLCFAAPRRALLSSV-----RNDVGEESVAENINTNKERIPDGTVEN 213
           + + F+F+ + M   C AAPRR ++  +     R  VG   + E   T+K   PD  ++N
Sbjct: 3   QAIVFIFVVMFMVGSCMAAPRREMIGGIYGQEQRQHVGRGKIIEG-RTSKVHYPDRNIDN 61

Query: 214 HHNIPRQYYNQW 249
           HH+IPRQ YN W
Sbjct: 62  HHSIPRQNYNDW 73


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