BLASTX nr result

ID: Rehmannia27_contig00052002 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00052002
         (467 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381437.1| hypothetical protein POPTR_0006s12830g [Popu...    55   1e-06

>ref|XP_006381437.1| hypothetical protein POPTR_0006s12830g [Populus trichocarpa]
           gi|550336140|gb|ERP59234.1| hypothetical protein
           POPTR_0006s12830g [Populus trichocarpa]
          Length = 183

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = -1

Query: 380 KMKVVAFVLISLMTSLCFAAPRRALLSSV-----RNNVGESVAENINTNKETIPDGTVEN 216
           K  +V   ++  M   C AAPRR ++  +     R +VG        T+K   PD  ++N
Sbjct: 2   KQAIVFIFVVMFMVGSCMAAPRREMIGGIYGQEQRQHVGRGKIIEGRTSKVHYPDRNIDN 61

Query: 215 HHNIPRQYYNQW 180
           HH+IPRQ YN W
Sbjct: 62  HHSIPRQNYNDW 73


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