BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00051436
         (463 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_438200.1| polyprotein [Oryza sativa endornavirus] gi|1030...   281   3e-85
ref|YP_438202.1| polyprotein [Oryza rufipogon endornavirus]           233   1e-68
ref|YP_009046830.1| putative polyprotein [Yerba mate endornaviru...    60   1e-07

>ref|YP_438200.1| polyprotein [Oryza sativa endornavirus] gi|1030716|dbj|BAA06862.1|
            polyprotein [Oryza sativa endornavirus]
          Length = 4572

 Score =  281 bits (719), Expect = 3e-85
 Identities = 140/152 (92%), Positives = 140/152 (92%)
 Frame = +1

Query: 1    HCVRECIKYAFNSLTMDAITSCSSLSISNLFKPGVTXXXXXXXXXXXXVNYCLVKRKQGR 180
            HCVRECIKYAFNSLTMDAITSCSSLSISNLFKPGVT            VNYCLVKRKQGR
Sbjct: 3511 HCVRECIKYAFNSLTMDAITSCSSLSISNLFKPGVTESELEDGLLSLGVNYCLVKRKQGR 3570

Query: 181  VMNSKPGPILSLKIGDGGISQHCVLIKISSYGKTVSLSGSPAVMPIKDNELKDHISNRLT 360
            VMNSKPGPILSLKIGDGGISQHCVLIKISSYGKTVSLSGSPAVMPIKDNELKDHISNRLT
Sbjct: 3571 VMNSKPGPILSLKIGDGGISQHCVLIKISSYGKTVSLSGSPAVMPIKDNELKDHISNRLT 3630

Query: 361  NNTSMELCNPHVMMSLLPNKWVKNFISRTRSI 456
            NNTSMELCNPHVMMSLLPNKWVKNFISRTRSI
Sbjct: 3631 NNTSMELCNPHVMMSLLPNKWVKNFISRTRSI 3662


>ref|YP_438202.1| polyprotein [Oryza rufipogon endornavirus]
          Length = 4627

 Score =  233 bits (595), Expect = 1e-68
 Identities = 108/154 (70%), Positives = 131/154 (85%)
 Frame = +1

Query: 1    HCVRECIKYAFNSLTMDAITSCSSLSISNLFKPGVTXXXXXXXXXXXXVNYCLVKRKQGR 180
            HCVRECI YAF++ T DAI +CSSLS+SNLFKPGVT            VNYCLVKRK GR
Sbjct: 3566 HCVRECINYAFSTNTKDAILACSSLSVSNLFKPGVTESELEDGLLSIGVNYCLVKRKNGR 3625

Query: 181  VMNSKPGPILSLKIGDGGISQHCVLIKISSYGKTVSLSGSPAVMPIKDNELKDHISNRLT 360
            +MN++PGP+L LKIGDGGISQHC+LIKI +YGK++SLSG+PAV+ IKDNEL++HI+ RL 
Sbjct: 3626 LMNARPGPVLCLKIGDGGISQHCILIKIINYGKSMSLSGTPAVISIKDNELENHITMRLA 3685

Query: 361  NNTSMELCNPHVMMSLLPNKWVKNFISRTRSISL 462
            NNTS+ELCNPH+MMS LPNKW+KNF++RTRS+SL
Sbjct: 3686 NNTSLELCNPHIMMSQLPNKWIKNFMARTRSLSL 3719


>ref|YP_009046830.1| putative polyprotein [Yerba mate endornavirus]
            gi|659676181|gb|AID67139.1| putative polyprotein [Yerba
            mate endornavirus]
          Length = 4580

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1    HCVRECIKYAFNSLTMDAITSCSSLSISNLFKPGVTXXXXXXXXXXXXVNYCLVKRK-QG 177
            +CV+E I  A N        + ++L ++NL   GV              N CLV      
Sbjct: 3517 YCVKESILEALNENGKIKFLTSNNLGVTNLRDKGVHKGNLINGVLCLGCNLCLVDDLGDA 3576

Query: 178  RVMNSKPGPILSLKIGDGGISQHCVLIKISSYGKTVSLSGSPAVMPIKDNELKDHISNRL 357
             ++N    P+++LK+       HC L+ I  Y     L+      P+ D+ +KD  +  L
Sbjct: 3577 LIINIYDAPVITLKVDSQRSVWHCSLVNIRHYEDIEDLTFDALCQPLIDDIVKDIHNEWL 3636

Query: 358  TNNTSMELCNPHVMMSLLPNK 420
            +  T MEL +P V+MS +P K
Sbjct: 3637 SKYTVMELVSPEVLMSHMPKK 3657