BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00051030
         (692 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   109   5e-24
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   101   4e-21
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...    99   3e-20
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...    98   4e-20
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...    98   4e-20
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178...    97   1e-19
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...    97   1e-19
gb|AAB82754.1| retrofit [Oryza longistaminata]                         97   1e-19
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    97   2e-19
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...    94   1e-18
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    94   2e-18
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]    94   2e-18
ref|XP_013658035.1| PREDICTED: uncharacterized protein LOC106362...    93   4e-18
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    93   4e-18
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          93   4e-18
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]    91   2e-17
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    91   2e-17
gb|KYP67572.1| Retrovirus-related Pol polyprotein from transposo...    89   2e-17
gb|KYP67563.1| Retrovirus-related Pol polyprotein from transposo...    89   2e-17
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    90   3e-17

>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  109 bits (273), Expect = 5e-24
 Identities = 70/199 (35%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+P     GY+YY+ F+D  T  TW Y LKAKSD  +AF    A ++ QF+   K +QS
Sbjct: 564  GPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQS 623

Query: 512  DGGGEFIANSNSFTHMA--SIIQFPALTHHKIMAWKKENTCT---LLRLVHPCLLNPI*P 348
            D GGEF A +     +     +  P  +H      +K        L  L H  L  P+  
Sbjct: 624  DWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTVERKHRHIVEMGLTLLSHAAL--PLKF 681

Query: 347  *DSGLMLFLVVYLINRTPSKILNYFNYS*DINQTTSP-----RAFGCPCYPHLRSYNKHK 183
             D        VYLINR PS  +  F         + P     + FGC C+PHLR YN HK
Sbjct: 682  WDHSFT--QAVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHK 739

Query: 182  LEFRSKCCTFMAMTHNIKG 126
            L++RS  C ++ ++   KG
Sbjct: 740  LQYRSSPCVYLGVSPQHKG 758



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
 Frame = -3

Query: 465  GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSCLPH**NXXXX 286
            GI H ++CP+T   NG  +RKH HIVE+G +LL+ + L ++FW  +F   +         
Sbjct: 640  GIQHRLTCPHTSHQNGTVERKHRHIVEMGLTLLSHAALPLKFWDHSFTQAV--------- 690

Query: 285  XXXXXXLIGHKPDYLPPGFWMSMLSPFEVLQQAQT-----RIQK*MLYIH---------- 151
                  LI   P    P F     SP+  L Q+Q      ++   + + H          
Sbjct: 691  -----YLINRLPSSAIPLFQ----SPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHKLQ 741

Query: 150  ---------GYDTQYKGYKILLPDY*TIITRDVVFDESIF 58
                     G   Q+KG+K L       I++DV+F ES F
Sbjct: 742  YRSSPCVYLGVSPQHKGHKCLDATGRIYISKDVIFHESQF 781


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  101 bits (251), Expect = 4e-21
 Identities = 72/199 (36%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
 Frame = -1

Query: 665  GYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQSDGGGEFIAN 486
            G  YYV+FI   +  TW YL+K KS+  Q F    A VE  F +K   +QSD GGE+   
Sbjct: 532  GKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKL 591

Query: 485  SNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P*DSGLMLFL----- 321
             + FT +        +THH       +   +  R     +       + GL L       
Sbjct: 592  HSFFTKIG-------ITHHVSCPHTHQQNGSAERKHRHIV-------EVGLTLLAYSSMP 637

Query: 320  ----------VVYLINRTPSKILNYFNYS*DI-NQT---TSPRAFGCPCYPHLRSYNKHK 183
                       VYLINRTP+K+L +      + NQT   +S R FGC C+PHLR YN HK
Sbjct: 638  LKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHK 697

Query: 182  LEFRSKCCTFMAMTHNIKG 126
            L+FRSK CTF+  +   KG
Sbjct: 698  LQFRSKQCTFLGYSTLHKG 716



 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
 Frame = -3

Query: 480  FFHTYGIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSCLPH** 301
            FF   GI H +SCP+T Q NG  +RKH HIVEVG +LLA S++ ++FW +AF + +    
Sbjct: 594  FFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLIN 653

Query: 300  NXXXXXXXXXXLIGH----KPDYLPPGFWMSMLSP-FEVLQQAQTRIQK*MLYIHGYDTQ 136
                        + H     PDY     +     P        + + +       GY T 
Sbjct: 654  RTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTL 713

Query: 135  YKGYKILLPDY*TI-ITRDVVFDESIFLFAK 46
            +KG+K L P    + I+RDV+FDE+ F FAK
Sbjct: 714  HKGFKCLDPSTGRVYISRDVIFDETNFPFAK 744


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1165

 Score = 99.0 bits (245), Expect = 3e-20
 Identities = 69/210 (32%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+P+    G+ YYV F+D  +  TW Y LK KSD +QAFI     VE QF K+ K +Q 
Sbjct: 432  GPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQC 491

Query: 512  DGGGEFIANSNSF--THMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P*DS 339
            DGGGEF + S     T +      P  +     A +K                     +S
Sbjct: 492  DGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVV----------------ES 535

Query: 338  GLMLF---------------LVVYLINRTPSKIL---NYFNYS*DIN-QTTSPRAFGCPC 216
            GL L                  V+LINR P++++   + +    D N   T+ + FGC C
Sbjct: 536  GLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCAC 595

Query: 215  YPHLRSYNKHKLEFRSKCCTFMAMTHNIKG 126
            YP L+ YN+HKL+F +  C F+  + + KG
Sbjct: 596  YPCLKPYNQHKLQFHTTKCVFLGYSGSHKG 625



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 46/145 (31%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
 Frame = -3

Query: 465 GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSC------LPH* 304
           GI    SCPYT   NG  +RKH H+VE G +LLAQ+ + + +W +AF +       LP  
Sbjct: 508 GIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPT- 566

Query: 303 *NXXXXXXXXXXLIGHKPDYLP-PGFWMSMLSPFEVLQQAQTRIQK*MLYIHGYDTQYKG 127
                       L    PDY     F  +     +   Q + +         GY   +KG
Sbjct: 567 -QVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKG 625

Query: 126 YKILLPDY*TIITRDVVFDESIFLF 52
           YK L       I+R VVF+E  F F
Sbjct: 626 YKCLNSTGRIFISRHVVFNEHHFPF 650


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score = 98.2 bits (243), Expect = 4e-20
 Identities = 73/211 (34%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
 Frame = -1

Query: 692 GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
           GP+PV    GY YYV  +D  T  TW +LLK+K+ T   F   +A V+ QF+   K +Q+
Sbjct: 182 GPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQLPIKAIQT 241

Query: 512 DGGGEFIANSNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P*DSGL 333
           D GGEF     SFT   +        HH+I+     +   ++   H  ++      + GL
Sbjct: 242 DWGGEF----RSFTSYLA----QHGIHHRIICPHTHHQNGVVECKHRHIV------ELGL 287

Query: 332 ML--------------FLV-VYLINRTPSKIL-------NYFNYS*DINQTTSPRAFGCP 219
            L              FL  VYLINR PS  +         F+   D N     R FGC 
Sbjct: 288 TLLAQAQLSMSFWDYAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFL---RVFGCS 344

Query: 218 CYPHLRSYNKHKLEFRSKCCTFMAMTHNIKG 126
           C+PHL  YNK KL+FRS+ C F+  + + KG
Sbjct: 345 CFPHLWPYNKTKLQFRSQECVFLGYSTSHKG 375



 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
 Frame = -3

Query: 486 FKFFHTY----GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFS 319
           F+ F +Y    GIHH I CP+T   NGV + KH HIVE+G +LLAQ+ L++ FW  AF +
Sbjct: 247 FRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWDYAFLT 306

Query: 318 C------LPH**NXXXXXXXXXXLIGHKPDY-LPPGFWMSMLSPFEVLQQAQTRIQK*ML 160
                  LP   +          L    PDY     F  S         + + + +    
Sbjct: 307 SVYLINRLPS--SSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRSQEC 364

Query: 159 YIHGYDTQYKGYKILLPDY*TIITRDVVFDESIFLFAKTKHHDCNSDSNSSV 4
              GY T +KGYK L P     I++DV+F E+ F +         S S+S +
Sbjct: 365 VFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPPSTPSSSSSPI 416


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score = 98.2 bits (243), Expect = 4e-20
 Identities = 73/211 (34%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
 Frame = -1

Query: 692 GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
           GP+PV    GY YYV  +D  T  TW +LLK+K+ T   F   +A V+ QF+   K +Q+
Sbjct: 203 GPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQLPIKAIQT 262

Query: 512 DGGGEFIANSNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P*DSGL 333
           D GGEF     SFT   +        HH+I+     +   ++   H  ++      + GL
Sbjct: 263 DWGGEF----RSFTSYLA----QHGIHHRIICPHTHHQNGVVECKHRHIV------ELGL 308

Query: 332 ML--------------FLV-VYLINRTPSKIL-------NYFNYS*DINQTTSPRAFGCP 219
            L              FL  VYLINR PS  +         F+   D N     R FGC 
Sbjct: 309 TLLAQAQLSMSFWDYAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFL---RVFGCS 365

Query: 218 CYPHLRSYNKHKLEFRSKCCTFMAMTHNIKG 126
           C+PHL  YNK KL+FRS+ C F+  + + KG
Sbjct: 366 CFPHLWPYNKTKLQFRSQECVFLGYSTSHKG 396



 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
 Frame = -3

Query: 486 FKFFHTY----GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFS 319
           F+ F +Y    GIHH I CP+T   NGV + KH HIVE+G +LLAQ+ L++ FW  AF +
Sbjct: 268 FRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWDYAFLT 327

Query: 318 C------LPH**NXXXXXXXXXXLIGHKPDY-LPPGFWMSMLSPFEVLQQAQTRIQK*ML 160
                  LP   +          L    PDY     F  S         + + + +    
Sbjct: 328 SVYLINRLPS--SSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRSQEC 385

Query: 159 YIHGYDTQYKGYKILLPDY*TIITRDVVFDESIFLFAKTKHHDCNSDSNSSV 4
              GY T +KGYK L P     I++DV+F E+ F +         S S+S +
Sbjct: 386 VFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPSMFPPSTPSSSSSPI 437


>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
          Length = 877

 Score = 97.1 bits (240), Expect = 1e-19
 Identities = 66/200 (33%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+P+  S GY+YY++ +D  T  TW + L  KS T  AFI+    +E     + K +Q+
Sbjct: 525  GPAPITSSQGYSYYLSILDDYTRYTWIFPLTTKSKTLSAFIDFKNMIENCLNLRIKCLQT 584

Query: 512  DGGGEFIANSNSFTHMASIIQFPA-LTHHKIMAWKK------ENTCTLLRLVHPCLLNPI 354
            D GGEF    +  +      + P    HH+    ++      E   TLL   H  L    
Sbjct: 585  DWGGEFRPFVSYLSEQGIQFRHPCPYIHHQNRKIERKHRHIVETGLTLLAQAHLPLKF-- 642

Query: 353  *P*DSGLMLFLVVYLINRTPSKILN----YFNYS*DINQTTSPRAFGCPCYPHLRSYNKH 186
                         YLINR P+ ILN    +      +   T  + FGC CYP+LR YN H
Sbjct: 643  ----WWNAFHTATYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYLRPYNHH 698

Query: 185  KLEFRSKCCTFMAMTHNIKG 126
            KL+FRS+ C F+  +   KG
Sbjct: 699  KLQFRSERCVFLGYSSLHKG 718



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 8/160 (5%)
 Frame = -3

Query: 465  GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSC------LPH* 304
            GI     CPY    N   +RKH HIVE G +LLAQ++L ++FW +AF +       LP  
Sbjct: 601  GIQFRHPCPYIHHQNRKIERKHRHIVETGLTLLAQAHLPLKFWWNAFHTATYLINRLP-- 658

Query: 303  *NXXXXXXXXXXLIGHK-PDY-LPPGFWMSMLSPFEVLQQAQTRIQK*MLYIHGYDTQYK 130
                         + HK PDY +   F  S           + + +       GY + +K
Sbjct: 659  -TPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYLRPYNHHKLQFRSERCVFLGYSSLHK 717

Query: 129  GYKILLPDY*TIITRDVVFDESIFLFAKTKHHDCNSDSNS 10
            GY+ L       I+  V FDES F F         S S+S
Sbjct: 718  GYQCLHLSGRVYISNHVTFDESFFPFQSADKFSTKSCSDS 757


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 70/201 (34%), Positives = 101/201 (50%), Gaps = 13/201 (6%)
 Frame = -1

Query: 689 PSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQSD 510
           P+P+    GY YYV F+D  T   W +L K+K+ T   F   +A ++ QF+   K +Q+D
Sbjct: 107 PAPITSDNGYQYYVTFVDAHTRFIWIFLFKSKAHTLDVFKQFHAMIQNQFQLPIKAIQTD 166

Query: 509 GGGEFIANSNSFTHMASI--IQFPAL---THHKIMAWKKENTCTLLRLVHPCLLNPI*P* 345
            GGEF     SFT   +   IQ   +   THH+    ++++   ++ L    L     P 
Sbjct: 167 WGGEF----RSFTSYLAQNGIQHRLICPHTHHQNGIVERKHR-HIVELGLTMLAQAHLPM 221

Query: 344 DSGLMLFLV-VYLINRTPSKILNY-------FNYS*DINQTTSPRAFGCPCYPHLRSYNK 189
                 FL  VYLINR PS  + +       F+   D N     R FGC C+PHLR YNK
Sbjct: 222 QFWDHAFLTSVYLINRLPSSSIQHDVPFRKLFHQLPDYNFL---RIFGCSCFPHLRPYNK 278

Query: 188 HKLEFRSKCCTFMAMTHNIKG 126
           +KL+ RS+ C F+  + + KG
Sbjct: 279 NKLQLRSQECVFLGYSTSHKG 299



 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
 Frame = -3

Query: 486 FKFFHTY----GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFS 319
           F+ F +Y    GI H + CP+T   NG+ +RKH HIVE+G ++LAQ++L ++FW  AF +
Sbjct: 171 FRSFTSYLAQNGIQHRLICPHTHHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAFLT 230

Query: 318 C------LPH**NXXXXXXXXXXLIGHKPDY-LPPGFWMSMLSPFEVLQQAQTRIQK*ML 160
                  LP   +          L    PDY     F  S         + + +++    
Sbjct: 231 SVYLINRLPS--SSIQHDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQEC 288

Query: 159 YIHGYDTQYKGYKILLPDY*TIITRDVVFDESIFLFAKTKHHDCNSDSNSSV 4
              GY T +KGYK L P     I++DV+F E+ F +         +   SS+
Sbjct: 289 VFLGYSTSHKGYKCLAPTGRIFISKDVIFCETRFPYPSLFPASATNPPTSSI 340


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 97.1 bits (240), Expect = 1e-19
 Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYN-YYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQ 516
            GP+P   S+G N YYV+FID  +  TW YLLK KS+ ++ F    A VE  F++K   +Q
Sbjct: 523  GPAPE--SVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQ 580

Query: 515  SDG-GGEFIANSNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P*DS 339
            +D  GG +   ++ F  +  II    LT  +     +     ++ +    L     P   
Sbjct: 581  TDWRGGRYQKLNSFFAQIGLIIMCHVLTLIRQNGSAERKHRHIVEVGLSLLSYASMPLKF 640

Query: 338  GLMLFLVV-YLINRTPSKILN-------YFNYS*DINQTTSPRAFGCPCYPHLRSYNKHK 183
                F+   YLINR PSK +         FN   D +   S R FGC C+PHLR YN HK
Sbjct: 641  WDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYS---SLRVFGCACWPHLRPYNTHK 697

Query: 182  LEFRSKCCTFMAMTHNIKG 126
            L+FRSK C F+  + + KG
Sbjct: 698  LQFRSKQCVFLGFSTHHKG 716



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
 Frame = -3

Query: 429  QNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSC------LPH**NXXXXXXXXXX 268
            + NG  +RKH HIVEVG SLL+ +++ ++FW +AF +       +P              
Sbjct: 611  RQNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPS--KTIQNSTPLEK 668

Query: 267  LIGHKPDYLPPGFWMSMLSP-FEVLQQAQTRIQK*MLYIHGYDTQYKGYKIL-LPDY*TI 94
            L   KPDY     +     P        + + +       G+ T +KG+K L +      
Sbjct: 669  LFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVY 728

Query: 93   ITRDVVFDESIFLFAKTKHHDCNSDSNSSVI 1
            I+RDVVFDE++F F+ T H +  +   S ++
Sbjct: 729  ISRDVVFDENVFPFS-TLHSNAGARLRSEIL 758


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 96.7 bits (239), Expect = 2e-19
 Identities = 66/184 (35%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
 Frame = -1

Query: 662  YNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQSDGGGEFIANS 483
            Y YYV+FID  +  TW YLL+ KSD Y++F      VE  F +K    QSD GGE+   +
Sbjct: 533  YKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLN 592

Query: 482  NSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P*DSGLMLFL-VVYLI 306
              F  +    Q      H+     +     ++ +    L     P       FL  VYLI
Sbjct: 593  AHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLI 652

Query: 305  NRTPSKILNYFNYS*DINQTT----SPRAFGCPCYPHLRSYNKHKLEFRSKCCTFMAMTH 138
            NRTPSK + +      +   T    S R FGC C+P+LR YN+HKL+FRS  C F+  ++
Sbjct: 653  NRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSN 712

Query: 137  NIKG 126
              KG
Sbjct: 713  MHKG 716



 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
 Frame = -3

Query: 477  FHTYGIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSCL----- 313
            F T GIHH +SCP+T Q NG  +RKH HIVEVG +LLAQS++ +++W  AF + +     
Sbjct: 595  FKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINR 654

Query: 312  -PH**NXXXXXXXXXXLIGHKPDYLPPGFWMSMLSP-FEVLQQAQTRIQK*MLYIHGYDT 139
             P              L G  PDY     +     P      Q + + +       GY  
Sbjct: 655  TPS--KTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSN 712

Query: 138  QYKGYKIL-LPDY*TIITRDVVFDESIFLFA 49
             +KG+K L +      I+RDVVFDE +F FA
Sbjct: 713  MHKGFKCLDISTGRIYISRDVVFDEHVFPFA 743


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score = 94.4 bits (233), Expect = 1e-18
 Identities = 71/205 (34%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GPSP     G+ YYV FIDH +  TWFY LK KSD +  F+     VE Q   K KI Q 
Sbjct: 525  GPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQC 584

Query: 512  DGGGEFIANSNSFTHM-----ASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P 348
            DGGGEFI +S    H+        +  P       MA +K      L L    +     P
Sbjct: 585  DGGGEFI-SSQFLKHLQDHGIQQNMSCPYTPQQNGMAERKHRHIVELGL--SMIFQSKLP 641

Query: 347  *DSGLMLFLVV-YLINRTPSKILN-----YFNYS*DINQTTSPRAFGCPCYPHLRSYNKH 186
                L  F    ++IN  P+  L+     Y        + ++ R FGC CYP LR Y   
Sbjct: 642  LKYWLESFFTANFVINLLPTSSLDNNESPYQKLYGKAPEYSALRVFGCACYPTLRDYAST 701

Query: 185  KLEFRSKCCTFMAMTHNIKGTRFCY 111
            K + RS  C F+      KG R  Y
Sbjct: 702  KFDPRSLKCVFLGYNEKYKGYRCLY 726


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 71/199 (35%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
 Frame = -1

Query: 686  SPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQSDG 507
            SPV+ + G +YYV FID  +  +W Y L  KSD +  F+      E  F    K +Q+D 
Sbjct: 527  SPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKTIAEKLFSTSIKQIQTDN 586

Query: 506  GGEFIANS-NSFTHMASIIQFPALTH----HKIMAWKKENTCTL-LRLVHPCLLNPI*P* 345
            GGEF +N    F     I       H    + I+  K  +   + L L+    L+P    
Sbjct: 587  GGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVERKHRHIQEMGLTLLAQSSLSPQYWV 646

Query: 344  DSGLMLFLVVYLINRTPSKILN----YFNYS*DINQTTSPRAFGCPCYPHLRSYNKHKLE 177
            D+ L     V+LINR P+K+L+    YF            R FGC CYP LR YN HKL 
Sbjct: 647  DAFL---TSVFLINRLPTKVLDNLTPYFLLHKTEPTYMDLRVFGCACYPLLRPYNDHKLT 703

Query: 176  FRSKCCTFMAMTHNIKGTR 120
            FRSK C F+  ++  KG R
Sbjct: 704  FRSKKCIFLGYSNCQKGYR 722



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
 Frame = -3

Query: 483  KFFHTYGIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSC--LP 310
            +F    GI H ++CP+T Q NG+ +RKH HI E+G +LLAQS+L+ ++W DAF +   L 
Sbjct: 597  QFLTAQGIFHRLTCPHTSQQNGIVERKHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLI 656

Query: 309  H**NXXXXXXXXXXLIGHK--PDYLPPGFW----MSMLSPFEVLQQAQTRIQK*MLYIHG 148
            +              + HK  P Y+    +      +L P+       T   K  +++ G
Sbjct: 657  NRLPTKVLDNLTPYFLLHKTEPTYMDLRVFGCACYPLLRPYN--DHKLTFRSKKCIFL-G 713

Query: 147  YDTQYKGYKIL-LPDY*TIITRDVVFDESIF 58
            Y    KGY+ L L      I+R V+FDE  F
Sbjct: 714  YSNCQKGYRCLDLATKRVYISRHVIFDEHSF 744


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+ VK + G  Y++ F+D  +  TWFY L+ K     AF     +VE QF+ K K +QS
Sbjct: 459  GPASVKSTSGARYFILFLDDYSRYTWFYPLQTKDQALPAFKKFKLQVENQFDAKIKCLQS 518

Query: 512  DGGGEFIANSNSFTHMASIIQFPALTHHKIMAWKKEN------TCTLLRLVHPCLLNPI* 351
            D GGEF  +  +F     I    +  ++     + E          L  L H  L     
Sbjct: 519  DNGGEF-RSFKTFLQQTGIFHRFSCPYNSAQNERVERKHRHVVETGLALLAHASL----- 572

Query: 350  P*DSGLMLF-LVVYLINRTPSKILN----YFNYS*DINQTTSPRAFGCPCYPHLRSYNKH 186
            P +     F    +LINR PSK+L     YF     +    S R F C CYP +R YN H
Sbjct: 573  PMEFWQYAFQTATFLINRMPSKVLQNNSPYFTLFQKVPDYESLRVFSCLCYPFIRPYNNH 632

Query: 185  KLEFRSKCCTFMAMTHNIKG 126
            KL++RS    F+  + + KG
Sbjct: 633  KLQYRSVQSLFLGYSLHNKG 652



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
 Frame = -3

Query: 486  FKFFHTY----GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFS 319
            F+ F T+    GI H  SCPY    N   +RKH H+VE G +LLA ++L + FW  AF +
Sbjct: 524  FRSFKTFLQQTGIFHRFSCPYNSAQNERVERKHRHVVETGLALLAHASLPMEFWQYAFQT 583

Query: 318  C------LPH**NXXXXXXXXXXLIGHKPDYLPPGFWMSMLSPF-EVLQQAQTRIQK*ML 160
                   +P              L    PDY     +  +  PF       + + +    
Sbjct: 584  ATFLINRMPS--KVLQNNSPYFTLFQKVPDYESLRVFSCLCYPFIRPYNNHKLQYRSVQS 641

Query: 159  YIHGYDTQYKGYKILLPDY*T---IITRDVVFDESIFLFAKTKHHDCNSDSNSSVI 1
               GY    KG+  L  D+ T    IT  VVFDE  F  AKT       D++++ +
Sbjct: 642  LFLGYSLHNKGFLCL--DFLTGRVYITPHVVFDEGQFPLAKTHPLSPTKDTSTNTL 695


>ref|XP_013658035.1| PREDICTED: uncharacterized protein LOC106362726 [Brassica napus]
          Length = 1062

 Score = 92.8 bits (229), Expect = 4e-18
 Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+PV    G+ YY+ FID+ +  +W Y LK KS+ +  F +    VE QFE+K +I+Q+
Sbjct: 444  GPAPVTSVQGFRYYIIFIDNHSRFSWLYPLKLKSEVFATFKSFQCLVENQFERKIQILQT 503

Query: 512  DGGGEFIANSNSFTHMAS-----IIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P 348
            DGGG+F+ N+   +H+ +      +  P       +A +K     L+ L    +     P
Sbjct: 504  DGGGDFV-NNQFASHLTNCGIKHYLSCPHTPEQNGLAERKHR--HLVELGMSMMFEAKMP 560

Query: 347  *DSGL-MLFLVVYLINRTPSKILN-----YFNYS*DINQTTSPRAFGCPCYPHLRSYNKH 186
                +  LF   +L N  P   L      Y   +      ++ R FGC CYP+LR Y+++
Sbjct: 561  QSLWVEALFTANFLTNLLPHTALGKTSSPYEKLNGFTPHYSALRVFGCCCYPYLRPYSQN 620

Query: 185  KLEFRSKCCTFMAMTHNIKGTR 120
            K + +S  C F+  T   KG R
Sbjct: 621  KFDPKSLLCVFLGYTEKQKGYR 642


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
            putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 92.8 bits (229), Expect = 4e-18
 Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+PV  S G+ YYV FID+ +  TWFY L+ KSD +  F+     VE Q ++K    Q 
Sbjct: 491  GPAPVVSSQGFRYYVIFIDNYSRFTWFYPLRLKSDFFSVFLTFQKMVENQCQQKIASFQC 550

Query: 512  DGGGEFIANSNSFTHMA-----SIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P 348
            DGGGEFI+N    +H+A      +I  P       +A +K    T   L    +     P
Sbjct: 551  DGGGEFISN-QFVSHLAECGIRQLISCPYTPQQNGIAERKHRHIT--ELGSSMMFQGKVP 607

Query: 347  *DSGLMLFLVV-YLINRTPSKILNYFNYS*DINQTTSP-----RAFGCPCYPHLRSYNKH 186
                +  F    +L N  PS +L       ++    +P     R FGC CYP+LR Y  +
Sbjct: 608  QFLWVEAFYTSNFLCNLLPSSVLKDQKSPYEVLMGKAPVYTSLRVFGCACYPNLRPYASN 667

Query: 185  KLEFRSKCCTFMAMTHNIKG 126
            K + +S  C F       KG
Sbjct: 668  KFDPKSLLCVFTGYNEKYKG 687



 Score = 74.7 bits (182), Expect = 6e-12
 Identities = 58/180 (32%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
 Frame = -3

Query: 465  GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSCLPH**NXXXX 286
            GI   ISCPYTPQ NG+ +RKH HI E+GSS++ Q  +    W +AF++           
Sbjct: 569  GIRQLISCPYTPQQNGIAERKHRHITELGSSMMFQGKVPQFLWVEAFYTS---------- 618

Query: 285  XXXXXXLIGHKPDYLPPGFWMSMLSPFEVLQ----------------------QAQTRIQ 172
                        + LP        SP+EVL                        A  +  
Sbjct: 619  --------NFLCNLLPSSVLKDQKSPYEVLMGKAPVYTSLRVFGCACYPNLRPYASNKFD 670

Query: 171  -K*MLYIH-GYDTQYKGYKILLPDY*TI-ITRDVVFDESIFLFAKTKHHDCNSDSNSSVI 1
             K +L +  GY+ +YKGYK   P    I I R V+FDES FLF+   + D  S +NS+++
Sbjct: 671  PKSLLCVFTGYNEKYKGYKCFHPPTGKIYINRHVLFDESKFLFSDI-YSDKVSGTNSTLV 729


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 92.8 bits (229), Expect = 4e-18
 Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
 Frame = -3

Query: 477  FHTYGIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSC------ 316
            F  +GIHH ISCPYTPQ NGV +RKH H+VE+G S+L  S+  ++FW +AFF+       
Sbjct: 597  FREHGIHHRISCPYTPQQNGVAERKHRHLVELGLSMLYHSHTPLKFWVEAFFTANYLSNL 656

Query: 315  LPH**NXXXXXXXXXXLIGHKPDYLPPGFWMSMLSP-FEVLQQAQTRIQK*MLYIHGYDT 139
            LP   +          L   K DY P   + +   P    L + +   +       GY  
Sbjct: 657  LPS--SVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKNKFDPRSLQCVFLGYHN 714

Query: 138  QYKGYKILLPDY*TI-ITRDVVFDESIFLFAKTKHH 34
            QYKGY+ L P    + I+R V+FDE+ F F K K+H
Sbjct: 715  QYKGYRCLYPPTGKVYISRHVIFDEAQFPF-KEKYH 749



 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 67/206 (32%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GPSPV  + G+ YY  F+D  +  +WF+ L+ KS     FI     VE Q   K K  QS
Sbjct: 523  GPSPVVSNQGFKYYAVFVDDFSRFSWFFPLRMKSKFISVFIAYQKLVENQLGTKIKEFQS 582

Query: 512  DGGGEFIAN-------SNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI 354
            DGGGEF +N        +   H    I  P       +A +K     L+ L    L +  
Sbjct: 583  DGGGEFTSNKLKEHFREHGIHHR---ISCPYTPQQNGVAERKHR--HLVELGLSMLYHSH 637

Query: 353  *P*DSGLMLFLVV-YLINRTPSKILNYFNYS*DINQT----TSPRAFGCPCYPHLRSYNK 189
             P    +  F    YL N  PS +L   +    + Q     T  R FG  CYP LR   K
Sbjct: 638  TPLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAK 697

Query: 188  HKLEFRSKCCTFMAMTHNIKGTRFCY 111
            +K + RS  C F+   +  KG R  Y
Sbjct: 698  NKFDPRSLQCVFLGYHNQYKGYRCLY 723


>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
          Length = 1319

 Score = 90.9 bits (224), Expect = 2e-17
 Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+ VK + G  Y++ F++  +  TWFY L+ K     AF     +VE QF+ K K +QS
Sbjct: 493  GPASVKSTSGARYFILFLNDYSQYTWFYPLQTKDQALPAFKKFKLQVENQFDAKIKCLQS 552

Query: 512  DGGGEFIANSNSFTHMASIIQFPALTHHKIMAWKKEN------TCTLLRLVHPCLLNPI* 351
            D GGEF  +  +F     I    +  ++     + E          L  L H  L     
Sbjct: 553  DNGGEF-RSFKTFLQQTGIFHRFSCPYNSAQNGRVERKHRHVVETGLALLAHASL----- 606

Query: 350  P*DSGLMLF-LVVYLINRTPSKILN----YFNYS*DINQTTSPRAFGCPCYPHLRSYNKH 186
            P +     F    +LINR PSK+L     YF     +    S R FGC CYP +R  N H
Sbjct: 607  PMEFWQYAFQTATFLINRMPSKVLQNNSPYFTLFQKVPNYKSLRVFGCLCYPFIRPCNSH 666

Query: 185  KLEFRSKCCTFMAMTHNIKG 126
            KL++RS    F+  + + KG
Sbjct: 667  KLQYRSVQSLFLGYSLHNKG 686



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
 Frame = -3

Query: 486  FKFFHTY----GIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFS 319
            F+ F T+    GI H  SCPY    NG  +RKH H+VE G +LLA ++L + FW  AF +
Sbjct: 558  FRSFKTFLQQTGIFHRFSCPYNSAQNGRVERKHRHVVETGLALLAHASLPMEFWQYAFQT 617

Query: 318  C------LPH**NXXXXXXXXXXLIGHKPDYLPPGFWMSMLSPF-EVLQQAQTRIQK*ML 160
                   +P              L    P+Y     +  +  PF       + + +    
Sbjct: 618  ATFLINRMPS--KVLQNNSPYFTLFQKVPNYKSLRVFGCLCYPFIRPCNSHKLQYRSVQS 675

Query: 159  YIHGYDTQYKGYKILLPDY*T---IITRDVVFDESIFLFAKTKHHDCNSDSNSSVI 1
               GY    KG+  L  D+ T    IT  VVFDE  F  AKT       D+++  +
Sbjct: 676  LFLGYSLHNKGFLCL--DFLTGRVYITPHVVFDEGQFPLAKTHPLSPTKDTSTDTL 729


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 90.9 bits (224), Expect = 2e-17
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP  +  + G  Y++ F+D  +  +W Y L +K      FI   + VE QF  + + ++S
Sbjct: 586  GPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQFNSRIQCLRS 645

Query: 512  DGGGEFIANSNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLNPI*P*DSGL 333
            D GGEF A S+         QF      +     +     ++      L     P    L
Sbjct: 646  DNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWL 705

Query: 332  MLF-LVVYLINRTPSKILNYFNYS*DINQTTSP-----RAFGCPCYPHLRSYNKHKLEFR 171
              F   ++LINR P+K+LNY +    I    SP     + FGC CYP++R YNK+KL +R
Sbjct: 706  YAFHTAIFLINRLPTKVLNYQSPF-QILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYR 764

Query: 170  SKCCTFMAMTHNIKG 126
            S  C F+  + N KG
Sbjct: 765  SSQCVFLGYSSNHKG 779



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
 Frame = -3

Query: 480  FFHTYGIHHTISCPYTPQNNGVEKRKHMHIVEVGSSLLAQSNLAIRFWPDAFFSC----- 316
            +  T+GI    SCPYTP+ NG  +RK  HI+E G +LLA ++L  +FW  AF +      
Sbjct: 657  YLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLIN 716

Query: 315  -LPH**NXXXXXXXXXXLIGHKPDYLPPGFWMSMLSPF-EVLQQAQTRIQK*MLYIHGYD 142
             LP              L G  P+Y     +  +  P+     + +   +       GY 
Sbjct: 717  RLPT--KVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYS 774

Query: 141  TQYKGYKILLPDY*TI-ITRDVVFDESIFLFAKTKHHDCNSDSNSSVI 1
            + +KGY  L P    + +TR VVF E++F F  T       D +SSV+
Sbjct: 775  SNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQST------PDQSSSVV 816


>gb|KYP67572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 349

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 68/197 (34%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
 Frame = -1

Query: 692 GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
           GP+ V  + G+ YY+ F+D  T  TW YLLK K+ T   F   +  V+ QF+   K +Q+
Sbjct: 156 GPASVTSTCGFQYYITFVDAYTRFTWIYLLKNKAQTIGIFKQFHNMVKNQFQLPIKALQT 215

Query: 512 DGGGE---FIANSNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLN-PI*P* 345
           D GG+   F A  N       +I  P   H   +  +K      L L      N P+   
Sbjct: 216 DWGGKYRPFTAYLNDVGIQHRLI-CPHTHHQNGVVERKHRHIVELGLTMLAEANLPMQFW 274

Query: 344 DSGLMLFLVVYLINRTP-SKILNYFNYS*DINQTTS---PRAFGCPCYPHLRSYNKHKLE 177
           D        VYLINR P S I N   Y    N+       + FGC C+PHLR YN++KL+
Sbjct: 275 DYAFP--TSVYLINRLPSSSIQNEVPYQKLFNKIPDYHFLKVFGCSCFPHLRPYNRNKLQ 332

Query: 176 FRSKCCTFMAMTHNIKG 126
            RS+ C F+  + + KG
Sbjct: 333 LRSQECLFLGYSTSHKG 349


>gb|KYP67563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 349

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 68/197 (34%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
 Frame = -1

Query: 692 GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
           GP+ V  + G+ YY+ F+D  T  TW YLLK K+ T   F   +  V+ QF+   K +Q+
Sbjct: 156 GPASVTSTCGFQYYITFVDAYTRFTWIYLLKNKAQTIGIFQQFHNMVKNQFQLPIKALQT 215

Query: 512 DGGGE---FIANSNSFTHMASIIQFPALTHHKIMAWKKENTCTLLRLVHPCLLN-PI*P* 345
           D GG+   F A  N       +I  P   H   +  +K      L L      N P+   
Sbjct: 216 DWGGKYRPFTAYLNDVGIQHRLI-CPHTHHQNGVVERKHRHIVELGLTMLAEANLPMQFW 274

Query: 344 DSGLMLFLVVYLINRTP-SKILNYFNYS*DINQTTS---PRAFGCPCYPHLRSYNKHKLE 177
           D        VYLINR P S I N   Y    N+       + FGC C+PHLR YN++KL+
Sbjct: 275 DYAFP--TSVYLINRLPSSSIQNEVPYQKLFNKIPDYHFLKVFGCSCFPHLRPYNRNKLQ 332

Query: 176 FRSKCCTFMAMTHNIKG 126
            RS+ C F+  + + KG
Sbjct: 333 LRSQECLFLGYSTSHKG 349


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 90.1 bits (222), Expect = 3e-17
 Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
 Frame = -1

Query: 692  GPSPVKFSLGYNYYVNFIDHTTIDTWFYLLKAKSDTYQAFINCNARVETQFEKKRKIVQS 513
            GP+ V  + G  Y++ F+D  +  TW YLL++K      F     +VE QF+ K K +QS
Sbjct: 500  GPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKQFKLQVENQFDAKIKCLQS 559

Query: 512  DGGGEFIANSNSFTHMASIIQFPALTHHKIMAWKKEN------TCTLLRLVHPCLLNPI* 351
            D GGEF  +  SF   + I+   +  ++     + E          L  L H  L     
Sbjct: 560  DNGGEF-RSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGL----- 613

Query: 350  P*DSGLMLF-LVVYLINRTPSKILN----YFNYS*DINQTTSPRAFGCPCYPHLRSYNKH 186
            P       F    +LINR PSK+L     YF            R FGC CYP +R YN H
Sbjct: 614  PLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNH 673

Query: 185  KLEFRSKCCTFMAMTHNIKG 126
            KL++RS  C F+  + + KG
Sbjct: 674  KLQYRSLKCVFLGYSLHHKG 693