BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00050381
         (468 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containi...   221   7e-67
ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containi...   216   6e-65
emb|CDO97508.1| unnamed protein product [Coffea canephora]            187   4e-56
ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-53
ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containi...   180   1e-51
ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containi...   180   1e-51
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...   181   1e-51
ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containi...   180   2e-51
ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containi...   180   3e-51
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...   179   8e-51
gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cyna...   167   3e-46
gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cyna...   160   1e-43
gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cyna...   162   1e-43
ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containi...   153   4e-41
ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containi...   151   2e-40
gb|KCW79406.1| hypothetical protein EUGRSUZ_C00814 [Eucalyptus g...   147   1e-39
ref|XP_012462981.1| PREDICTED: pentatricopeptide repeat-containi...   147   3e-39
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein...   148   3e-39
gb|KJB83000.1| hypothetical protein B456_013G224200, partial [Go...   147   3e-39
ref|XP_010047479.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-39

>ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Erythranthe guttata] gi|848930449|ref|XP_012828448.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Erythranthe guttata]
           gi|604298483|gb|EYU18527.1| hypothetical protein
           MIMGU_mgv1a003955mg [Erythranthe guttata]
          Length = 552

 Score =  221 bits (562), Expect = 7e-67
 Identities = 103/154 (66%), Positives = 129/154 (83%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           ANAGKFR+AE ILIA+AE CN+++E+VS  + N FLS+L ++NR+D+AV+ F+ HIL+ +
Sbjct: 155 ANAGKFRIAEEILIARAEYCNEKDELVSSFVYNNFLSMLTNKNRIDDAVLFFKSHILRLK 214

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
           SF PD CSFN VMRGLC   +V++AF+ FDVMRSFSC PD+VTYNTLINGLCRVG VDRA
Sbjct: 215 SFCPDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRVGKVDRA 274

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKME 463
            ELLR+I++  EFS +VVTYTSVISGYCK GK +
Sbjct: 275 EELLREIKVQSEFSADVVTYTSVISGYCKLGKTD 308



 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 42/152 (27%), Positives = 70/152 (46%)
 Frame = +2

Query: 11  GKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRSFA 190
           GK   AE +L    E+  Q E           +S      + D A  LF   I  +    
Sbjct: 269 GKVDRAEELL---REIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMI--NNGIR 323

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           P+  +FN ++ G      V  A  +++ M +    PD+VT+ +LI+G CR G++ +   L
Sbjct: 324 PNLFTFNAIIDGFGKKGEVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHL 383

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           L ++      SPNV T++ +IS  CK  ++ +
Sbjct: 384 LNEMN-EKRVSPNVFTFSVLISALCKENRLNE 414



 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 26/99 (26%), Positives = 51/99 (51%)
 Frame = +2

Query: 170 LKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGN 349
           + +  F PD  +F +++ G C    + +   L + M      P++ T++ LI+ LC+   
Sbjct: 352 MTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLNEMNEKRVSPNVFTFSVLISALCKENR 411

Query: 350 VDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ++ A +LL  ++   +  P    Y  VI GYCK+G +++
Sbjct: 412 LNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDE 450


>ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081065|ref|XP_011087805.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081067|ref|XP_011087806.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081069|ref|XP_011087807.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081071|ref|XP_011087808.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum] gi|747081073|ref|XP_011087809.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Sesamum indicum]
           gi|747081075|ref|XP_011087810.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Sesamum indicum]
          Length = 552

 Score =  216 bits (549), Expect = 6e-65
 Identities = 104/154 (67%), Positives = 128/154 (83%)
 Frame = +2

Query: 5   NAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRS 184
           NAGKFR+AE ILIA+AE+CN++ E VS  + NKFL +LI+RNRVDEAV+ FRGHIL+  S
Sbjct: 153 NAGKFRVAEEILIAQAEICNEKGETVSSFVYNKFLCILINRNRVDEAVLFFRGHILRLGS 212

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           F PD  SFN V++GLC V +V+ AF+  DVMRSFSC PD+VTYNTLING CRVG++DRA 
Sbjct: 213 FCPDTQSFNIVIKGLCRVGKVDTAFEFLDVMRSFSCHPDLVTYNTLINGFCRVGHMDRAE 272

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ELLR+++    FSP+VVTYTSVISGYC+SGKME+
Sbjct: 273 ELLREVKPQSGFSPDVVTYTSVISGYCRSGKMEE 306



 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 38/110 (34%), Positives = 66/110 (60%)
 Frame = +2

Query: 134 VDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTY 313
           +D A  L R  +     F+PD  ++ +V+ G C   ++EEA  LFD M ++   P++ T+
Sbjct: 268 MDRAEELLR-EVKPQSGFSPDVVTYTSVISGYCRSGKMEEAAALFDEMINYGTRPNLFTF 326

Query: 314 NTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKME 463
           N +I+G  + G V  A ++  +  ++C F P+VVT+TS+I  YC+ G++E
Sbjct: 327 NVIIDGFGKKGKVASALKMY-ERMVNCGFHPDVVTFTSLIDCYCRRGELE 375



 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 27/94 (28%), Positives = 48/94 (51%)
 Frame = +2

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           F PD  +F +++   C    +E+   L+D M      P+  T++ LI  LC+   ++ A 
Sbjct: 354 FHPDVVTFTSLIDCYCRRGELEQGMKLWDEMNERKVSPNAFTFSILITSLCKENRLNEAR 413

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           +LLR +    +  P    Y  VI G+CK+G +++
Sbjct: 414 DLLRQLNWREDIVPPPFIYNPVIDGFCKAGNIDE 447



 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 31/102 (30%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
 Frame = +2

Query: 170 LKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT----YNTLINGLC 337
           +  R  +P+  +F+ ++  LC  +R+ EA DL   +R  +   DIV     YN +I+G C
Sbjct: 384 MNERKVSPNAFTFSILITSLCKENRLNEARDL---LRQLNWREDIVPPPFIYNPVIDGFC 440

Query: 338 RVGNVDRAHELLRDIQLH-CEFSPNVVTYTSVISGYCKSGKM 460
           + GN+D A+ +++++++  C    + +T+T +I G+C  G+M
Sbjct: 441 KAGNIDEANAIVKEMEMKGCVH--DKMTFTILILGHCMKGRM 480


>emb|CDO97508.1| unnamed protein product [Coffea canephora]
          Length = 322

 Score =  187 bits (474), Expect = 4e-56
 Identities = 93/155 (60%), Positives = 117/155 (75%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           ANAGKFR+ + +LI++A L +++EE+VS    N  LS+L+ RNRVDEAV  F+ HIL  R
Sbjct: 130 ANAGKFRICKEVLISQANLSSEKEEVVSSFAHNILLSMLVKRNRVDEAVQFFQDHILILR 189

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
            F PD CSFN V+RGLC   +V++AF LF  M SF C PD++TYN+LINGLC VGN+DRA
Sbjct: 190 GFCPDTCSFNIVIRGLCKGGQVDKAFQLFYDMGSFGCSPDMITYNSLINGLCTVGNLDRA 249

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
             LLRDIQ     +P+VVTYTS+ISG CKSGKME+
Sbjct: 250 LCLLRDIQSQVGVAPDVVTYTSIISGLCKSGKMEE 284


>ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana sylvestris] gi|698470503|ref|XP_009783825.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Nicotiana sylvestris]
           gi|698470507|ref|XP_009783826.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana sylvestris] gi|698470511|ref|XP_009783827.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Nicotiana sylvestris]
          Length = 546

 Score =  184 bits (466), Expect = 9e-53
 Identities = 93/156 (59%), Positives = 117/156 (75%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAEL-CNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKS 178
           ANAGKF +A+ ILI++AEL  ++   +V P + N  LSLL+ RN+VDEAV  F+ HIL+S
Sbjct: 145 ANAGKFGIAKEILISQAELGSDEGSFVVRPFVHNSLLSLLMKRNQVDEAVDFFKDHILRS 204

Query: 179 RSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDR 358
               PD C+FN V+RGLC V  V++AF+ F+ M SF C PDIVTYNTLINGLC VG VDR
Sbjct: 205 ERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDIVTYNTLINGLCGVGQVDR 264

Query: 359 AHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           A  LLR ++L   +SP+VVTYTSVISGYCK G+M+D
Sbjct: 265 ARSLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDD 300



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  ++ L    +VD A  L R   L+   ++PD  ++ +V+ G C + R+++A +L D M
Sbjct: 250 NTLINGLCGVGQVDRARSLLRSLELQD-GYSPDVVTYTSVISGYCKLGRMDDAINLMDEM 308

Query: 278 RSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFS--PNVVTYTSVISGYCKS 451
            ++   P +VT+N LING  ++G++  A  +   +   C F   P+VVT+TS+I G+C++
Sbjct: 309 ITYGITPTMVTFNILINGFGKIGDMFSAQNMYERM---CAFGCPPDVVTFTSLIDGHCRT 365

Query: 452 GKME 463
           G ++
Sbjct: 366 GDLD 369



 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 27/92 (29%), Positives = 50/92 (54%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C    +++   L+D M + +  P++ T++ LI  L R   ++ A EL
Sbjct: 350 PDVVTFTSLIDGHCRTGDLDQGLRLWDEMNTRNLWPNLYTFSVLIGALSRENRLNEAREL 409

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LR + L  +  P    Y  V+ G+CK+G + +
Sbjct: 410 LRQLILRDDIVPQPFVYNPVLDGFCKAGNLNE 441


>ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X3 [Solanum pennellii]
          Length = 510

 Score =  180 bits (457), Expect = 1e-51
 Identities = 91/155 (58%), Positives = 115/155 (74%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           ANAGKF +A+ ILI++AEL  +   IV P + N  LSLL+ R+RVDEAV  F+ HIL+S 
Sbjct: 152 ANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSD 211

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
              PD C+FNTV+RGLC V  V++AF+ F+ M SF C PD VTYNTLINGLC VG V+RA
Sbjct: 212 RLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRA 271

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
             LL ++QL    SP+VVTYTS+ISGYCK G+M++
Sbjct: 272 QGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDE 306



 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 37/122 (30%), Positives = 75/122 (61%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  ++ L +  +V+ A  L  G++      +PD  ++ +++ G C + R++EA +L D M
Sbjct: 256 NTLINGLCAVGQVNRAQGLL-GNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEM 314

Query: 278 RSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGK 457
            S+   P++VT+N LING  ++G++  A ++   +     + P+VVT+TS++ GYC++G+
Sbjct: 315 ISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKM-CAVGYPPDVVTFTSLVDGYCRTGE 373

Query: 458 ME 463
           ++
Sbjct: 374 VD 375



 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 28/94 (29%), Positives = 52/94 (55%)
 Frame = +2

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           + PD  +F +++ G C    V++   L+D M S +  P++ TY+ LI+ L +   ++ A 
Sbjct: 354 YPPDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAR 413

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ELLR ++   +  P    Y  V+ G+CK+G + +
Sbjct: 414 ELLRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSE 447



 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 34/112 (30%), Positives = 60/112 (53%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           R+DEA+ L    I  S   +P+  +FN ++ G   +  +  A  ++  M +    PD+VT
Sbjct: 303 RMDEAINLMDEMI--SYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVT 360

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + +L++G CR G VD+  +L  D+      SPN+ TY+ +IS   K  ++ +
Sbjct: 361 FTSLVDGYCRTGEVDQGLKLWDDMNSR-NLSPNLYTYSVLISALSKENRLNE 411


>ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Solanum pennellii]
           gi|969996347|ref|XP_015062701.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Solanum pennellii]
          Length = 529

 Score =  180 bits (457), Expect = 1e-51
 Identities = 91/155 (58%), Positives = 115/155 (74%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           ANAGKF +A+ ILI++AEL  +   IV P + N  LSLL+ R+RVDEAV  F+ HIL+S 
Sbjct: 152 ANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSD 211

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
              PD C+FNTV+RGLC V  V++AF+ F+ M SF C PD VTYNTLINGLC VG V+RA
Sbjct: 212 RLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRA 271

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
             LL ++QL    SP+VVTYTS+ISGYCK G+M++
Sbjct: 272 QGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDE 306



 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 37/122 (30%), Positives = 75/122 (61%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  ++ L +  +V+ A  L  G++      +PD  ++ +++ G C + R++EA +L D M
Sbjct: 256 NTLINGLCAVGQVNRAQGLL-GNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEM 314

Query: 278 RSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGK 457
            S+   P++VT+N LING  ++G++  A ++   +     + P+VVT+TS++ GYC++G+
Sbjct: 315 ISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKM-CAVGYPPDVVTFTSLVDGYCRTGE 373

Query: 458 ME 463
           ++
Sbjct: 374 VD 375



 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 28/94 (29%), Positives = 52/94 (55%)
 Frame = +2

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           + PD  +F +++ G C    V++   L+D M S +  P++ TY+ LI+ L +   ++ A 
Sbjct: 354 YPPDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAR 413

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ELLR ++   +  P    Y  V+ G+CK+G + +
Sbjct: 414 ELLRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSE 447



 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 34/112 (30%), Positives = 60/112 (53%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           R+DEA+ L    I  S   +P+  +FN ++ G   +  +  A  ++  M +    PD+VT
Sbjct: 303 RMDEAINLMDEMI--SYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVT 360

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + +L++G CR G VD+  +L  D+      SPN+ TY+ +IS   K  ++ +
Sbjct: 361 FTSLVDGYCRTGEVDQGLKLWDDMNSR-NLSPNLYTYSVLISALSKENRLNE 411


>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Solanum tuberosum] gi|565370447|ref|XP_006351832.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Solanum tuberosum]
          Length = 550

 Score =  181 bits (458), Expect = 1e-51
 Identities = 90/155 (58%), Positives = 115/155 (74%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           ANAGKF +A+ ILI++AEL  +   IV P + N  LSLL+ R+RVDEAV  F+ HIL+S 
Sbjct: 150 ANAGKFEIAKEILISQAELGREEGRIVRPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSE 209

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
              PD C+FNTV+RGLC V  V++AF+ F+ M SF C PD VTYNTLINGLC VG V+RA
Sbjct: 210 RLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCFPDTVTYNTLINGLCSVGQVNRA 269

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
             LL +++L    SP+VVTYTSVI+GYCK G+M++
Sbjct: 270 RGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDE 304



 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 39/122 (31%), Positives = 75/122 (61%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  ++ L S  +V+ A  L  G++      +PD  ++ +V+ G C + R++EA +L D M
Sbjct: 254 NTLINGLCSVGQVNRARGLL-GNLELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDEM 312

Query: 278 RSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGK 457
            ++   P++VT+N LING  ++G++  A ++   +     + P+VVT+TS+I GYC++G+
Sbjct: 313 TTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRM-CAVGYPPDVVTFTSLIDGYCRTGE 371

Query: 458 ME 463
           ++
Sbjct: 372 LD 373



 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 25/92 (27%), Positives = 51/92 (55%)
 Frame = +2

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           + PD  +F +++ G C    +++   L+D M + +  P++ T++ LI+ L +   ++ A 
Sbjct: 352 YPPDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEAR 411

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           ELLR ++   +  P    Y  V+ G+CK+G +
Sbjct: 412 ELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNL 443



 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 30/112 (26%), Positives = 60/112 (53%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           R+DEA+ L     + +   +P+  +FN ++ G   +  +  A  ++  M +    PD+VT
Sbjct: 301 RMDEAINLMDE--MTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVT 358

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + +LI+G CR G +D+  +L  ++      SPN+ T++ +IS   K  ++ +
Sbjct: 359 FTSLIDGYCRTGELDQGLKLWDEMNTR-NLSPNLYTFSILISALSKENRLNE 409


>ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Solanum pennellii]
           gi|969996341|ref|XP_015062677.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Solanum pennellii]
           gi|969996343|ref|XP_015062684.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Solanum pennellii]
          Length = 552

 Score =  180 bits (457), Expect = 2e-51
 Identities = 91/155 (58%), Positives = 115/155 (74%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           ANAGKF +A+ ILI++AEL  +   IV P + N  LSLL+ R+RVDEAV  F+ HIL+S 
Sbjct: 152 ANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSD 211

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
              PD C+FNTV+RGLC V  V++AF+ F+ M SF C PD VTYNTLINGLC VG V+RA
Sbjct: 212 RLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRA 271

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
             LL ++QL    SP+VVTYTS+ISGYCK G+M++
Sbjct: 272 QGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMDE 306



 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 37/122 (30%), Positives = 75/122 (61%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  ++ L +  +V+ A  L  G++      +PD  ++ +++ G C + R++EA +L D M
Sbjct: 256 NTLINGLCAVGQVNRAQGLL-GNLQLQDGLSPDVVTYTSLISGYCKLGRMDEAINLMDEM 314

Query: 278 RSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGK 457
            S+   P++VT+N LING  ++G++  A ++   +     + P+VVT+TS++ GYC++G+
Sbjct: 315 ISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKM-CAVGYPPDVVTFTSLVDGYCRTGE 373

Query: 458 ME 463
           ++
Sbjct: 374 VD 375



 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 28/94 (29%), Positives = 52/94 (55%)
 Frame = +2

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           + PD  +F +++ G C    V++   L+D M S +  P++ TY+ LI+ L +   ++ A 
Sbjct: 354 YPPDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAR 413

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ELLR ++   +  P    Y  V+ G+CK+G + +
Sbjct: 414 ELLRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSE 447



 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 34/112 (30%), Positives = 60/112 (53%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           R+DEA+ L    I  S   +P+  +FN ++ G   +  +  A  ++  M +    PD+VT
Sbjct: 303 RMDEAINLMDEMI--SYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVT 360

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + +L++G CR G VD+  +L  D+      SPN+ TY+ +IS   K  ++ +
Sbjct: 361 FTSLVDGYCRTGEVDQGLKLWDDMNSR-NLSPNLYTYSVLISALSKENRLNE 411


>ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123061|ref|XP_009615518.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123063|ref|XP_009615519.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123065|ref|XP_009615520.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
           gi|697123067|ref|XP_009615521.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Nicotiana tomentosiformis]
          Length = 546

 Score =  180 bits (456), Expect = 3e-51
 Identities = 91/156 (58%), Positives = 116/156 (74%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIV-SPSLCNKFLSLLISRNRVDEAVVLFRGHILKS 178
           ANAGKF +A+ ILI++AEL ++   +V  P + N  LSLL+ RN+VD AV  F+ HIL+S
Sbjct: 145 ANAGKFGIAKEILISQAELGSEEGSVVVRPFVHNSLLSLLMKRNQVDGAVDFFKDHILRS 204

Query: 179 RSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDR 358
               PD C+FN V+RGLC V  V++AF+ F+ M SF C PD+VTYNTLINGLC VG VDR
Sbjct: 205 ERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDLVTYNTLINGLCGVGQVDR 264

Query: 359 AHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           A  LLR ++L   +SP+VVTYTSVISGYCK G+M+D
Sbjct: 265 ARGLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDD 300



 Score = 72.4 bits (176), Expect = 4e-12
 Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  ++ L    +VD A  L R   L+   ++PD  ++ +V+ G C + R+++A +L D M
Sbjct: 250 NTLINGLCGVGQVDRARGLLRSLELQD-GYSPDVVTYTSVISGYCKLGRMDDAINLMDEM 308

Query: 278 RSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFS--PNVVTYTSVISGYCKS 451
            ++   P++VT+N LING  ++G++  A ++   +   C F   P+VVT TS+I G+C++
Sbjct: 309 ITYGISPNMVTFNILINGFGKIGDMFSAQKMYERM---CAFGCPPDVVTLTSLIDGHCRT 365

Query: 452 GKME 463
           G ++
Sbjct: 366 GDLD 369


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Solanum lycopersicum] gi|723664227|ref|XP_010315007.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Solanum lycopersicum]
          Length = 550

 Score =  179 bits (453), Expect = 8e-51
 Identities = 90/155 (58%), Positives = 114/155 (73%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           ANAGKF +A+ ILI++AEL  +   IV P + N  LSLL+ R+RVDEAV  F+ HIL+S 
Sbjct: 150 ANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSE 209

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
              PD C+FNTV+RGLC V  V++AF+ F+ M SF C PD VTYNTLINGLC VG V+RA
Sbjct: 210 RLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRA 269

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
             LL ++QL    SP+VVTYTS+ISGYCK  +M++
Sbjct: 270 QGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDE 304



 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 37/122 (30%), Positives = 75/122 (61%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  ++ L +  +V+ A  L  G++      +PD  ++ +++ G C + R++EA +L D M
Sbjct: 254 NTLINGLCAVGQVNRAQGLL-GNLQLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEM 312

Query: 278 RSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGK 457
            ++   P++VT+N LING  ++G++  A ++   +     + P+VVT+TS+I GYC++G+
Sbjct: 313 ITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKM-CAVGYPPDVVTFTSLIDGYCRTGE 371

Query: 458 ME 463
           ++
Sbjct: 372 LD 373



 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 26/94 (27%), Positives = 52/94 (55%)
 Frame = +2

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           + PD  +F +++ G C    +++   L+D M S +  P++ T++ LI+ L +   ++ A 
Sbjct: 352 YPPDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEAR 411

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ELLR ++   +  P    Y  V+ G+CK+G + +
Sbjct: 412 ELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSE 445



 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/113 (28%), Positives = 61/113 (53%)
 Frame = +2

Query: 128 NRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIV 307
           +R+DEA+ L    I  +   +P+  +FN ++ G   +  +  A  ++  M +    PD+V
Sbjct: 300 SRMDEAINLMDEMI--TYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVV 357

Query: 308 TYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           T+ +LI+G CR G +D+  +L  D+      SPN+ T++ +IS   K  ++ +
Sbjct: 358 TFTSLIDGYCRTGELDQGLKLWDDMNSR-NLSPNLYTFSVLISALSKENRLNE 409


>gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 562

 Score =  167 bits (422), Expect = 3e-46
 Identities = 78/154 (50%), Positives = 109/154 (70%)
 Frame = +2

Query: 5   NAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRS 184
           NAGKF +A+ +++  +    +++E++S  + NK LS L+  N +DEAV  F   IL+ + 
Sbjct: 168 NAGKFEVAKELMVDHSRSSVEKDEVLSCVVFNKLLSSLVKSNHMDEAVSFFENIILRLKC 227

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           ++PD C+FN V+  LC    V++AF +F+ MR F C PD+VTYNTL+NG CR GNVD+AH
Sbjct: 228 YSPDACTFNIVISALCRAREVDKAFSIFNKMRKFGCFPDLVTYNTLLNGFCRAGNVDKAH 287

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ELLR+  +    SPNVVT+TSVISGYCK GKME+
Sbjct: 288 ELLRETCMVDGCSPNVVTFTSVISGYCKLGKMEE 321



 Score = 66.2 bits (160), Expect = 6e-10
 Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVM 277
           N  L+       VD+A  L R   +     +P+  +F +V+ G C + ++EEA  LFD M
Sbjct: 271 NTLLNGFCRAGNVDKAHELLRETCMVD-GCSPNVVTFTSVISGYCKLGKMEEAMVLFDNM 329

Query: 278 RSFSCLPDIVTYNTLINGLCRVGN-VDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSG 454
                 P+ VT+N +I+G  ++GN V   +   + + L C  +P+V+T+TS+I G+C+ G
Sbjct: 330 IGHGIRPNTVTFNVIIDGFGKIGNMVSVLNMYEKMVDLGC--TPDVITFTSIIDGHCRLG 387

Query: 455 KME 463
           +++
Sbjct: 388 ELQ 390



 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 28/91 (30%), Positives = 52/91 (57%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C +  +++   ++D M   +  P+I T++ LIN LC  G ++ A +L
Sbjct: 371 PDVITFTSIIDGHCRLGELQQGLKIWDEMNRRNLYPNIYTFSILINTLCEKGRLNEACDL 430

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKME 463
           LR ++   +  P    Y  VI G+CK+G ++
Sbjct: 431 LRQLKKRDDIVPKTFVYIPVIDGFCKAGNVD 461



 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 26/112 (23%), Positives = 62/112 (55%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           +++EA+VLF   I       P+  +FN ++ G   +  +    ++++ M    C PD++T
Sbjct: 318 KMEEAMVLFDNMI--GHGIRPNTVTFNVIIDGFGKIGNMVSVLNMYEKMVDLGCTPDVIT 375

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + ++I+G CR+G + +  ++  ++       PN+ T++ +I+  C+ G++ +
Sbjct: 376 FTSIIDGHCRLGELQQGLKIWDEMNRR-NLYPNIYTFSILINTLCEKGRLNE 426


>gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 557

 Score =  160 bits (404), Expect = 1e-43
 Identities = 76/154 (49%), Positives = 109/154 (70%)
 Frame = +2

Query: 5   NAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRS 184
           NAGKF +A+ +++  +    +++ ++S  + NK LS L+  N+VDEAV  F   IL+S+ 
Sbjct: 163 NAGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNQVDEAVAFFENIILRSQC 222

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           ++ +  +FN V+ GLC    V++AF  F+ MR F CLPD+VTYNTL+NG CR GNV++AH
Sbjct: 223 YSHNAYTFNIVISGLCRAREVDKAFGFFNHMRMFGCLPDVVTYNTLLNGFCRAGNVNKAH 282

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           +LLR+  +    SPNVVT+TSVISGYCK GKME+
Sbjct: 283 DLLRETSMVDGCSPNVVTFTSVISGYCKLGKMEE 316



 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 27/92 (29%), Positives = 51/92 (55%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C +  V +   ++D M   +  P+I T++ LIN LC+   ++ A +L
Sbjct: 366 PDVITFTSIIDGHCRLGEVHQGLKIWDEMNRRNLYPNIYTFSILINTLCKZXRLNEARDL 425

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           L  ++   +  P    Y  VI G+CK+G +++
Sbjct: 426 LXQLKKRXDIIPKAFVYNPVIDGFCKAGNVDE 457



 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
 Frame = +2

Query: 158 RGHILKSRSFAPDNCS-----FNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTL 322
           + H L   +   D CS     F +V+ G C + ++EEA  LF  M S    P   T+N +
Sbjct: 280 KAHDLLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHGIXPSTFTFNVI 339

Query: 323 INGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           I+G  ++GN+     +   +  H   +P+V+T+TS+I G+C+ G++
Sbjct: 340 IDGFGKIGNMVSVLNMYEKMVDH-GCTPDVITFTSIIDGHCRLGEV 384



 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 28/112 (25%), Positives = 61/112 (54%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           +++EA+VLF   I  S    P   +FN ++ G   +  +    ++++ M    C PD++T
Sbjct: 313 KMEEAMVLFSDMI--SHGIXPSTFTFNVIIDGFGKIGNMVSVLNMYEKMVDHGCTPDVIT 370

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + ++I+G CR+G V +  ++  ++       PN+ T++ +I+  CK  ++ +
Sbjct: 371 FTSIIDGHCRLGEVHQGLKIWDEMNRR-NLYPNIYTFSILINTLCKZXRLNE 421


>gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 746

 Score =  162 bits (409), Expect = 1e-43
 Identities = 77/154 (50%), Positives = 109/154 (70%)
 Frame = +2

Query: 5   NAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRS 184
           NAGKF +A+ +++  +    +++ ++S  + NK LS L+  NRVDEAV  F   IL+S+ 
Sbjct: 278 NAGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNRVDEAVAFFENIILRSQC 337

Query: 185 FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAH 364
           ++ +  +FN V+ GLC    V++AF  F+ MR F CLPD+VTYNTL+NG CR GNV++AH
Sbjct: 338 YSHNAYTFNIVISGLCRAREVDKAFGFFNHMRKFGCLPDVVTYNTLLNGFCRAGNVNKAH 397

Query: 365 ELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           +LLR+  +    SPNVVT+TSVISGYCK GKME+
Sbjct: 398 DLLRETSMVDGCSPNVVTFTSVISGYCKLGKMEE 431



 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 28/92 (30%), Positives = 52/92 (56%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C +  V +   ++D M   +  P+I T++ LIN LC+   ++ A +L
Sbjct: 481 PDVITFTSIIDGHCRLGEVHQGLKIWDEMNRXNLYPNIYTFSILINTLCKENRLNEARDL 540

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LR ++   +  P    Y  VI G+CK+G +++
Sbjct: 541 LRQLKKRSDIIPKAFVYNPVIDGFCKAGNVDE 572



 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 28/112 (25%), Positives = 61/112 (54%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           +++EA+VLF   I  S    P   +FN ++ G   +  +    ++++ M    C PD++T
Sbjct: 428 KMEEAMVLFSDMI--SHGIXPSTFTFNVIIDGFGKIGNMVSVLNMYEKMVDHGCTPDVIT 485

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + ++I+G CR+G V +  ++  ++       PN+ T++ +I+  CK  ++ +
Sbjct: 486 FTSIIDGHCRLGEVHQGLKIWDEMN-RXNLYPNIYTFSILINTLCKENRLNE 536



 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
 Frame = +2

Query: 158 RGHILKSRSFAPDNCS-----FNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTL 322
           + H L   +   D CS     F +V+ G C + ++EEA  LF  M S    P   T+N +
Sbjct: 395 KAHDLLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHGIXPSTFTFNVI 454

Query: 323 INGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           I+G  ++GN+     +   +  H   +P+V+T+TS+I G+C+ G++
Sbjct: 455 IDGFGKIGNMVSVLNMYEKMVDH-GCTPDVITFTSIIDGHCRLGEV 499


>ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Nelumbo nucifera]
          Length = 586

 Score =  153 bits (387), Expect = 4e-41
 Identities = 73/129 (56%), Positives = 93/129 (72%)
 Frame = +2

Query: 80  VSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAF 259
           V+P + N  L +L+  NRV EAV L R H+  S  F PD C+FN V++GLC +  V+ AF
Sbjct: 214 VNPFVYNNLLEILVKSNRVQEAVCLLREHL--SSCFRPDTCTFNIVIKGLCRIGEVDRAF 271

Query: 260 DLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISG 439
           ++FD M SF C PD+VTYNTLINGLCR  +VDR H LL +IQ + +FS +VVTYTS+I G
Sbjct: 272 EIFDDMGSFGCCPDVVTYNTLINGLCRASDVDRGHRLLMEIQSNSKFSLDVVTYTSLIKG 331

Query: 440 YCKSGKMED 466
           YCK GKME+
Sbjct: 332 YCKLGKMEE 340



 Score = 72.4 bits (176), Expect = 4e-12
 Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
 Frame = +2

Query: 158 RGH-----ILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTL 322
           RGH     I  +  F+ D  ++ ++++G C + ++EEA +L+D M      P+++TYNTL
Sbjct: 304 RGHRLLMEIQSNSKFSLDVVTYTSLIKGYCKLGKMEEASNLYDEMVRSGTEPNVITYNTL 363

Query: 323 INGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           I+G  ++G V  A  +   + L   F P+VVT+TS+I  +C+SG++++
Sbjct: 364 IDGFSKIGEVGSAMVMYEKLLLQGCF-PDVVTFTSLIDAHCRSGQIDE 410



 Score = 66.2 bits (160), Expect = 6e-10
 Identities = 32/113 (28%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           ++DE + L+  H +++R+ +P+  +F+ ++  LC  +R+ EA  L   ++    +P    
Sbjct: 407 QIDEGIKLW--HEMQTRNISPNAHTFHVLINSLCKENRLNEARGLLRQLKWTDIVPQAFV 464

Query: 311 YNTLINGLCRVGNVDRAHELLRDI-QLHCEFSPNVVTYTSVISGYCKSGKMED 466
           YN +I+G C+ GN+D A+ ++ ++ +  C+   +  T+T +I G+C  GKM +
Sbjct: 465 YNPVIDGFCKAGNIDEANAIVAEMEEKRCKL--DTYTFTILIIGHCMKGKMHE 515



 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/92 (28%), Positives = 50/92 (54%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           P+  ++NT++ G   +  V  A  +++ +    C PD+VT+ +LI+  CR G +D   +L
Sbjct: 355 PNVITYNTLIDGFSKIGEVGSAMVMYEKLLLQGCFPDVVTFTSLIDAHCRSGQIDEGIKL 414

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
             ++Q     SPN  T+  +I+  CK  ++ +
Sbjct: 415 WHEMQTR-NISPNAHTFHVLINSLCKENRLNE 445



 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 30/111 (27%), Positives = 60/111 (54%)
 Frame = +2

Query: 134 VDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTY 313
           V  A+V++   +L+     PD  +F +++   C   +++E   L+  M++ +  P+  T+
Sbjct: 373 VGSAMVMYEKLLLQG--CFPDVVTFTSLIDAHCRSGQIDEGIKLWHEMQTRNISPNAHTF 430

Query: 314 NTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + LIN LC+   ++ A  LLR ++   +  P    Y  VI G+CK+G +++
Sbjct: 431 HVLINSLCKENRLNEARGLLRQLK-WTDIVPQAFVYNPVIDGFCKAGNIDE 480


>ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Jatropha curcas] gi|643708689|gb|KDP23605.1|
           hypothetical protein JCGZ_23438 [Jatropha curcas]
          Length = 545

 Score =  151 bits (381), Expect = 2e-40
 Identities = 83/153 (54%), Positives = 110/153 (71%)
 Frame = +2

Query: 8   AGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRSF 187
           AGKF +A+++L   AE+ +Q E  +S  + N  L+ L+ RN+V EA+ LF  H L S S 
Sbjct: 155 AGKFNLAKKLL---AEIQSQ-EVRISSFVYNNLLNELVRRNQVHEALCLFEEH-LASHSP 209

Query: 188 APDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHE 367
           A D  +FN ++RGLC V  V+ AF+ F+ M SF CLPDIVTYNTLINGLCRV  +DR H+
Sbjct: 210 A-DTWTFNILIRGLCRVGEVDRAFEFFNDMESFGCLPDIVTYNTLINGLCRVNELDRGHK 268

Query: 368 LLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LL+++Q   + SP+VVTYTSVISG+CK GKME+
Sbjct: 269 LLKEVQSRNDCSPDVVTYTSVISGFCKPGKMEE 301



 Score = 72.4 bits (176), Expect = 4e-12
 Identities = 45/115 (39%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
 Frame = +2

Query: 131 RVDEAVVLFRGHIL----KSRS-FAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCL 295
           RV+E   L RGH L    +SR+  +PD  ++ +V+ G C   ++EEA  LFD M      
Sbjct: 259 RVNE---LDRGHKLLKEVQSRNDCSPDVVTYTSVISGFCKPGKMEEASVLFDEMIRSGIK 315

Query: 296 PDIVTYNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           P++ T+N LI+G  ++G++D A E +R+  +     P+VVT+TS+I GYC+SG++
Sbjct: 316 PNVFTFNVLIDGFGKIGDMDAA-EAVREKMVSFGCLPDVVTFTSLIDGYCRSGQV 369



 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 27/92 (29%), Positives = 48/92 (52%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C   +V     ++D M++    P++ TY  LIN LC+   +  A + 
Sbjct: 351 PDVVTFTSLIDGYCRSGQVYLGLKIWDAMKAMGVPPNVYTYAILINALCKENRLHEARDF 410

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LR ++      P    Y  VI G+CK+G +++
Sbjct: 411 LRQLKF-SNVVPKPFVYNPVIDGFCKAGNVDE 441



 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 26/99 (26%), Positives = 56/99 (56%)
 Frame = +2

Query: 170 LKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGN 349
           +K+    P+  ++  ++  LC  +R+ EA D    ++  + +P    YN +I+G C+ GN
Sbjct: 379 MKAMGVPPNVYTYAILINALCKENRLHEARDFLRQLKFSNVVPKPFVYNPVIDGFCKAGN 438

Query: 350 VDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           VD A+ ++ +++     +P+ +T+  +I G+C  G+M +
Sbjct: 439 VDEANLIVMEME-EKRCNPDKITFNILIIGHCMKGRMNE 476


>gb|KCW79406.1| hypothetical protein EUGRSUZ_C00814 [Eucalyptus grandis]
          Length = 435

 Score =  147 bits (371), Expect = 1e-39
 Identities = 77/155 (49%), Positives = 106/155 (68%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           A AGK    + I I K    +  E  +S  +CN  L+LL++R++V +A+ LF+ H+L   
Sbjct: 42  AEAGKIDSVKHI-IGKV---HGSEIQMSSHICNTILNLLVNRDQVHQAISLFKEHLLLHA 97

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
           S  PD  + N ++RGLC V  +++AF LF+ M SF C PDIVT+NTLINGLCRV  +DR 
Sbjct: 98  S--PDTWTLNILIRGLCRVREIDKAFQLFNDMGSFGCSPDIVTFNTLINGLCRVKEIDRG 155

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           H LL+++Q  C+ SP+VVTYTSVISG CK G+ME+
Sbjct: 156 HHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRMEE 190



 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 37/112 (33%), Positives = 60/112 (53%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           R++EA +LF    + S    P   +FN ++ G      +  A  ++D M S  C PD+VT
Sbjct: 187 RMEEASLLFEE--MNSSGIRPSTVTFNVLINGFGKAGNMSSALSMYDKMLSVGCYPDVVT 244

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + +LI+G CRVG V+   +L R +      SPN  T++ +I+  CK  ++ D
Sbjct: 245 FTSLIDGHCRVGQVNEGLKLWRLMSAR-NISPNAYTFSVLINTLCKDNRLHD 295



 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
 Frame = +2

Query: 158 RGHIL----KSR-SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTL 322
           RGH L    +SR   +PD  ++ +V+ G C + R+EEA  LF+ M S    P  VT+N L
Sbjct: 154 RGHHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRMEEASLLFEEMNSSGIRPSTVTFNVL 213

Query: 323 INGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ING  + GN+  A  +  D  L     P+VVT+TS+I G+C+ G++ +
Sbjct: 214 INGFGKAGNMSSALSMY-DKMLSVGCYPDVVTFTSLIDGHCRVGQVNE 260



 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 31/110 (28%), Positives = 66/110 (60%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           +V+E + L+R  ++ +R+ +P+  +F+ ++  LC  +R+ +A +    +R    +P    
Sbjct: 257 QVNEGLKLWR--LMSARNISPNAYTFSVLINTLCKDNRLHDARECLRQLRWTDIVPKPFI 314

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           YN +++G C+ GNVD A+ +L +++      P+ +T+T +I G+C  G+M
Sbjct: 315 YNPVMDGFCKAGNVDEANIILAEME-EKGCRPDKLTFTILIIGHCMKGRM 363



 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 51/92 (55%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C V +V E   L+ +M + +  P+  T++ LIN LC+   +  A E 
Sbjct: 240 PDVVTFTSLIDGHCRVGQVNEGLKLWRLMSARNISPNAYTFSVLINTLCKDNRLHDAREC 299

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LR ++   +  P    Y  V+ G+CK+G +++
Sbjct: 300 LRQLR-WTDIVPKPFIYNPVMDGFCKAGNVDE 330


>ref|XP_012462981.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Gossypium raimondii] gi|823260519|ref|XP_012462982.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Gossypium raimondii]
           gi|823260521|ref|XP_012462983.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Gossypium raimondii] gi|823260523|ref|XP_012462984.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Gossypium raimondii]
           gi|763816146|gb|KJB82998.1| hypothetical protein
           B456_013G224200 [Gossypium raimondii]
           gi|763816147|gb|KJB82999.1| hypothetical protein
           B456_013G224200 [Gossypium raimondii]
          Length = 524

 Score =  147 bits (372), Expect = 3e-39
 Identities = 76/152 (50%), Positives = 109/152 (71%)
 Frame = +2

Query: 8   AGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRSF 187
           AG+F MA ++L   AE+ +  + +V+    N  L++++ +N ++EAV L++ ++    +F
Sbjct: 159 AGEFGMARKLL---AEVQSD-DVMVTIFAVNNLLNMMVKQNNLEEAVSLYKENL--GLNF 212

Query: 188 APDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHE 367
            PD  +FN ++RGLC V +V++AF+ F+ MRSF C PDIVTYNT+INGLCR   VDR H 
Sbjct: 213 NPDTWTFNILIRGLCRVGKVDQAFEFFNDMRSFGCFPDIVTYNTIINGLCREYEVDRGHS 272

Query: 368 LLRDIQLHCEFSPNVVTYTSVISGYCKSGKME 463
           LL +I+L  + +PNVVTYTSVISGYCK GKME
Sbjct: 273 LLNEIRLRDDCAPNVVTYTSVISGYCKLGKME 304



 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
 Frame = +2

Query: 158 RGHILKSRSFAPDNCS-----FNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTL 322
           RGH L +     D+C+     + +V+ G C + ++E+A  LFD M S   LP +VT+N L
Sbjct: 269 RGHSLLNEIRLRDDCAPNVVTYTSVISGYCKLGKMEKASALFDEMMSSGTLPSVVTFNVL 328

Query: 323 INGLCRVGNVDRAHELLRDI-QLHCEFSPNVVTYTSVISGYCKSG 454
           I+G  +VG++  A  L   +    C   P+VVT+TS+I+GYC+ G
Sbjct: 329 IDGFGKVGDMLSAKSLYEKMASFGC--IPDVVTFTSLINGYCQIG 371



 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 36/110 (32%), Positives = 64/110 (58%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           ++++A  LF    + S    P   +FN ++ G   V  +  A  L++ M SF C+PD+VT
Sbjct: 302 KMEKASALFDE--MMSSGTLPSVVTFNVLIDGFGKVGDMLSAKSLYEKMASFGCIPDVVT 359

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           + +LING C++G+V+R+ +L   +++    SPNV T+   I+  CK  ++
Sbjct: 360 FTSLINGYCQIGDVNRSFQLWDAMKVK-NVSPNVYTFAITINALCKENRL 408



 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 27/92 (29%), Positives = 49/92 (53%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C +  V  +F L+D M+  +  P++ T+   IN LC+   +  A   
Sbjct: 355 PDVVTFTSLINGYCQIGDVNRSFQLWDAMKVKNVSPNVYTFAITINALCKENRLCEACRF 414

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LR++Q      P    +  VI G+CK+G +++
Sbjct: 415 LRELQCR-NIVPKPFIFNPVIDGFCKAGNLDE 445



 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 26/97 (26%), Positives = 56/97 (57%)
 Frame = +2

Query: 170 LKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGN 349
           +K ++ +P+  +F   +  LC  +R+ EA      ++  + +P    +N +I+G C+ GN
Sbjct: 383 MKVKNVSPNVYTFAITINALCKENRLCEACRFLRELQCRNIVPKPFIFNPVIDGFCKAGN 442

Query: 350 VDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           +D A+ ++ +++   +  P+ VT+T +I G+C  G+M
Sbjct: 443 LDEANRIVAEMEKK-KCDPDKVTFTILIIGHCMKGRM 478


>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 592

 Score =  148 bits (374), Expect = 3e-39
 Identities = 73/153 (47%), Positives = 108/153 (70%)
 Frame = +2

Query: 8   AGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRSF 187
           AG+F MA+++L          E ++S    N  L++++ +N+++EAV L++ ++    +F
Sbjct: 201 AGEFGMAKKLLAD----VQSDEVVISIFALNNLLNMMVKQNKLEEAVSLYKENL--GSNF 254

Query: 188 APDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHE 367
            PD  +FN ++RGLC V +V++AF+LF+ M SF C PDIVTYNT+INGLC+V  VDR H+
Sbjct: 255 YPDAWTFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHK 314

Query: 368 LLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LL  +Q   + SP+VVTYTSVISGYCK GKM++
Sbjct: 315 LLNQVQSRDDCSPDVVTYTSVISGYCKLGKMDE 347



 Score = 69.7 bits (169), Expect = 4e-11
 Identities = 36/112 (32%), Positives = 65/112 (58%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           ++DEA  LF  H + S    P   +FN ++ G   V  +  A  +++ M SF C+ D+VT
Sbjct: 344 KMDEASALF--HEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGCIADVVT 401

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + +LI+G CR+G+V+++ +L   ++   + SPNV T+   I+  CK  ++ +
Sbjct: 402 FTSLIDGYCRIGDVNQSLQLWNTMKGR-DLSPNVYTFAITINALCKENRLHE 452



 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
 Frame = +2

Query: 98  NKFLSLLISRNRVDEAVVLFRGHILKSRSFAPDNCS-----FNTVMRGLCLVDRVEEAFD 262
           N  ++ L   N VD      RGH L ++  + D+CS     + +V+ G C + +++EA  
Sbjct: 297 NTIINGLCKVNEVD------RGHKLLNQVQSRDDCSPDVVTYTSVISGYCKLGKMDEASA 350

Query: 263 LFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHELLRDI-QLHCEFSPNVVTYTSVISG 439
           LF  M S   +P +VT+N LI+G  +VG++  A  +   +    C    +VVT+TS+I G
Sbjct: 351 LFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGC--IADVVTFTSLIDG 408

Query: 440 YCKSG 454
           YC+ G
Sbjct: 409 YCRIG 413



 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/97 (27%), Positives = 55/97 (56%)
 Frame = +2

Query: 170 LKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGN 349
           +K R  +P+  +F   +  LC  +R+ EA      ++  + +P    +N +I+G C+ GN
Sbjct: 425 MKGRDLSPNVYTFAITINALCKENRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCKAGN 484

Query: 350 VDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           +D A+ ++ +++   +  P+ VT+T +I G+C  G+M
Sbjct: 485 LDEANLIVAEME-EKQCHPDKVTFTILIIGHCMKGRM 520


>gb|KJB83000.1| hypothetical protein B456_013G224200, partial [Gossypium raimondii]
          Length = 533

 Score =  147 bits (372), Expect = 3e-39
 Identities = 76/152 (50%), Positives = 109/152 (71%)
 Frame = +2

Query: 8   AGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSRSF 187
           AG+F MA ++L   AE+ +  + +V+    N  L++++ +N ++EAV L++ ++    +F
Sbjct: 168 AGEFGMARKLL---AEVQSD-DVMVTIFAVNNLLNMMVKQNNLEEAVSLYKENL--GLNF 221

Query: 188 APDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHE 367
            PD  +FN ++RGLC V +V++AF+ F+ MRSF C PDIVTYNT+INGLCR   VDR H 
Sbjct: 222 NPDTWTFNILIRGLCRVGKVDQAFEFFNDMRSFGCFPDIVTYNTIINGLCREYEVDRGHS 281

Query: 368 LLRDIQLHCEFSPNVVTYTSVISGYCKSGKME 463
           LL +I+L  + +PNVVTYTSVISGYCK GKME
Sbjct: 282 LLNEIRLRDDCAPNVVTYTSVISGYCKLGKME 313



 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
 Frame = +2

Query: 158 RGHILKSRSFAPDNCS-----FNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTL 322
           RGH L +     D+C+     + +V+ G C + ++E+A  LFD M S   LP +VT+N L
Sbjct: 278 RGHSLLNEIRLRDDCAPNVVTYTSVISGYCKLGKMEKASALFDEMMSSGTLPSVVTFNVL 337

Query: 323 INGLCRVGNVDRAHELLRDI-QLHCEFSPNVVTYTSVISGYCKSG 454
           I+G  +VG++  A  L   +    C   P+VVT+TS+I+GYC+ G
Sbjct: 338 IDGFGKVGDMLSAKSLYEKMASFGC--IPDVVTFTSLINGYCQIG 380



 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 36/110 (32%), Positives = 64/110 (58%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           ++++A  LF    + S    P   +FN ++ G   V  +  A  L++ M SF C+PD+VT
Sbjct: 311 KMEKASALFDE--MMSSGTLPSVVTFNVLIDGFGKVGDMLSAKSLYEKMASFGCIPDVVT 368

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           + +LING C++G+V+R+ +L   +++    SPNV T+   I+  CK  ++
Sbjct: 369 FTSLINGYCQIGDVNRSFQLWDAMKVK-NVSPNVYTFAITINALCKENRL 417



 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 27/92 (29%), Positives = 49/92 (53%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C +  V  +F L+D M+  +  P++ T+   IN LC+   +  A   
Sbjct: 364 PDVVTFTSLINGYCQIGDVNRSFQLWDAMKVKNVSPNVYTFAITINALCKENRLCEACRF 423

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LR++Q      P    +  VI G+CK+G +++
Sbjct: 424 LRELQCR-NIVPKPFIFNPVIDGFCKAGNLDE 454



 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 26/97 (26%), Positives = 56/97 (57%)
 Frame = +2

Query: 170 LKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGN 349
           +K ++ +P+  +F   +  LC  +R+ EA      ++  + +P    +N +I+G C+ GN
Sbjct: 392 MKVKNVSPNVYTFAITINALCKENRLCEACRFLRELQCRNIVPKPFIFNPVIDGFCKAGN 451

Query: 350 VDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           +D A+ ++ +++   +  P+ VT+T +I G+C  G+M
Sbjct: 452 LDEANRIVAEMEKK-KCDPDKVTFTILIIGHCMKGRM 487


>ref|XP_010047479.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Eucalyptus grandis]
          Length = 598

 Score =  147 bits (371), Expect = 9e-39
 Identities = 77/155 (49%), Positives = 106/155 (68%)
 Frame = +2

Query: 2   ANAGKFRMAERILIAKAELCNQREEIVSPSLCNKFLSLLISRNRVDEAVVLFRGHILKSR 181
           A AGK    + I I K    +  E  +S  +CN  L+LL++R++V +A+ LF+ H+L   
Sbjct: 205 AEAGKIDSVKHI-IGKV---HGSEIQMSSHICNTILNLLVNRDQVHQAISLFKEHLLLHA 260

Query: 182 SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRA 361
           S  PD  + N ++RGLC V  +++AF LF+ M SF C PDIVT+NTLINGLCRV  +DR 
Sbjct: 261 S--PDTWTLNILIRGLCRVREIDKAFQLFNDMGSFGCSPDIVTFNTLINGLCRVKEIDRG 318

Query: 362 HELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           H LL+++Q  C+ SP+VVTYTSVISG CK G+ME+
Sbjct: 319 HHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRMEE 353



 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 37/112 (33%), Positives = 60/112 (53%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           R++EA +LF    + S    P   +FN ++ G      +  A  ++D M S  C PD+VT
Sbjct: 350 RMEEASLLFEE--MNSSGIRPSTVTFNVLINGFGKAGNMSSALSMYDKMLSVGCYPDVVT 407

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           + +LI+G CRVG V+   +L R +      SPN  T++ +I+  CK  ++ D
Sbjct: 408 FTSLIDGHCRVGQVNEGLKLWRLMSAR-NISPNAYTFSVLINTLCKDNRLHD 458



 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
 Frame = +2

Query: 158 RGHIL----KSR-SFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTL 322
           RGH L    +SR   +PD  ++ +V+ G C + R+EEA  LF+ M S    P  VT+N L
Sbjct: 317 RGHHLLKEVQSRCDVSPDVVTYTSVISGCCKLGRMEEASLLFEEMNSSGIRPSTVTFNVL 376

Query: 323 INGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           ING  + GN+  A  +  D  L     P+VVT+TS+I G+C+ G++ +
Sbjct: 377 INGFGKAGNMSSALSMY-DKMLSVGCYPDVVTFTSLIDGHCRVGQVNE 423



 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 31/110 (28%), Positives = 66/110 (60%)
 Frame = +2

Query: 131 RVDEAVVLFRGHILKSRSFAPDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVT 310
           +V+E + L+R  ++ +R+ +P+  +F+ ++  LC  +R+ +A +    +R    +P    
Sbjct: 420 QVNEGLKLWR--LMSARNISPNAYTFSVLINTLCKDNRLHDARECLRQLRWTDIVPKPFI 477

Query: 311 YNTLINGLCRVGNVDRAHELLRDIQLHCEFSPNVVTYTSVISGYCKSGKM 460
           YN +++G C+ GNVD A+ +L +++      P+ +T+T +I G+C  G+M
Sbjct: 478 YNPVMDGFCKAGNVDEANIILAEME-EKGCRPDKLTFTILIIGHCMKGRM 526



 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 51/92 (55%)
 Frame = +2

Query: 191 PDNCSFNTVMRGLCLVDRVEEAFDLFDVMRSFSCLPDIVTYNTLINGLCRVGNVDRAHEL 370
           PD  +F +++ G C V +V E   L+ +M + +  P+  T++ LIN LC+   +  A E 
Sbjct: 403 PDVVTFTSLIDGHCRVGQVNEGLKLWRLMSARNISPNAYTFSVLINTLCKDNRLHDAREC 462

Query: 371 LRDIQLHCEFSPNVVTYTSVISGYCKSGKMED 466
           LR ++   +  P    Y  V+ G+CK+G +++
Sbjct: 463 LRQLR-WTDIVPKPFIYNPVMDGFCKAGNVDE 493