BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00049947
         (1655 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   597   0.0  
gb|KYP44480.1| Retrovirus-related Pol polyprotein from transposo...   557   0.0  
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   548   0.0  
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   547   0.0  
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   564   0.0  
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   571   0.0  
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   564   0.0  
gb|KYP47651.1| Retrovirus-related Pol polyprotein from transposo...   536   0.0  
gb|KYP44486.1| Retrovirus-related Pol polyprotein from transposo...   535   0.0  
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo...   551   0.0  
gb|KYP50571.1| Retrovirus-related Pol polyprotein from transposo...   534   0.0  
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   526   e-180
gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposo...   525   e-179
gb|KYP34165.1| Copia protein [Cajanus cajan]                          522   e-178
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]   538   e-177
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   543   e-177
dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]            528   e-177
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   542   e-175
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...   541   e-175
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   539   e-175

>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  597 bits (1540), Expect = 0.0
 Identities = 307/539 (56%), Positives = 388/539 (71%), Gaps = 3/539 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            SK GI KP +YT  L  + EP+T +EA+S P+WK+AM +E+ AL+KN TW L  LP N+ 
Sbjct: 728  SKNGIFKPXVYTVDLN-VEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRT 786

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             +GCRWVFK K N DGS+++YKARLVAKGY+Q  GFD+ ETFSPVVKP TIR++L+IAVS
Sbjct: 787  SVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVS 846

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGF--VQXXXXXXXXXXXXXXYGLKQASRAWS 535
             SW +RQLDV NAFLNG++  E+YM+QPPGF                  YGLKQA RAW 
Sbjct: 847  QSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWF 906

Query: 536  SKFSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQH 715
             K   +L   GFS +K+D SL+ R    S + +L YVDDIV+TGS++QEI  +I +L+  
Sbjct: 907  DKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGL 966

Query: 716  FSLKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSK 892
            FSLKDLG+L+YFLGIE      G L LSQ+KY++DLL K  M GAK L TPM+S   LS 
Sbjct: 967  FSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSA 1026

Query: 893  FDGSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAG 1072
              G PI++   YRS+VG LQY T+TRP+I+FSVN+V QFMQ PLD HWKAVKRILRYL G
Sbjct: 1027 GMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNG 1086

Query: 1073 TLDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRSS 1252
            T D G+    S + N+  F D+DW SD+DDRRSTSG CVFLG +LVSWSSKKQ T SRSS
Sbjct: 1087 TTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSS 1146

Query: 1253 TEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLEI 1432
            TEAEYRSLA +T ++LW+QSLL EL   +    VIW DN+  +SL+ NPV HSRTKH+E+
Sbjct: 1147 TEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMEL 1206

Query: 1433 DLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSLELRGNE 1609
            DL+F+R+KV +  + V +VP+ DQV+D+ TK LS +FF +LR KL V   +SL+L+  +
Sbjct: 1207 DLYFVREKVMERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTV---ASLDLKNGD 1262


>gb|KYP44480.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 552

 Score =  557 bits (1435), Expect = 0.0
 Identities = 280/541 (51%), Positives = 374/541 (69%), Gaps = 8/541 (1%)
 Frame = +2

Query: 2    SKAGIHKPKIYTT-------QLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELC 160
            +KAGIHKPK Y          L P  EP +++EA++IP WK+ M +EY AL+KN+TW L 
Sbjct: 5    AKAGIHKPKAYNIVTTTPKLDLNPFHEPRSIKEAMAIPHWKKTMLEEYKALMKNNTWILT 64

Query: 161  PLPANKELIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRI 340
             LPA + LIGCRWVFK K N DGS+ ++KARLVAKG+ Q  GFD++ETFSPVVKPATIRI
Sbjct: 65   TLPAGRNLIGCRWVFKVKTNSDGSINRHKARLVAKGFHQRDGFDFSETFSPVVKPATIRI 124

Query: 341  ILSIAVSHSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQA 520
            ILSI VS SW +RQ+D+ANAFLNGD+  ++YM QPPGF+Q              YGLKQA
Sbjct: 125  ILSIVVSRSWDMRQIDIANAFLNGDLQEDIYMAQPPGFIQTDKSLVCKLQKSL-YGLKQA 183

Query: 521  SRAWSSKFSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVID 700
             RAW  +   +L  +GF  +K D+SL+ R +      IL YVDDI+I GS+   I  V++
Sbjct: 184  PRAWFERLHLSLSRIGFYYAKMDSSLFIRFHKDHITFILVYVDDIIICGSSTSAISSVVE 243

Query: 701  QLQQHFSLKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSS 877
            QLQ  F ++DLG  NYFLGI+    P+  L L+Q KY+ DLL++  M  AK + TPMV+ 
Sbjct: 244  QLQSEFPVRDLGFPNYFLGIQVDQLPNRTLMLTQTKYINDLLNRTNMHMAKPIKTPMVAG 303

Query: 878  PFLSKFDGSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRIL 1057
              L   +G+   +   YRSIVG LQY T+TRP+I+FSVN+V Q+MQ P + HW AVKRIL
Sbjct: 304  LKLQPLEGTAHYEITQYRSIVGSLQYITITRPEIAFSVNKVCQYMQAPRNPHWMAVKRIL 363

Query: 1058 RYLAGTLDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPT 1237
            RYL GTL+  L+   S  F+I  F D+DW S+L+DR+ST+G+ ++LG N +SWSSKKQ  
Sbjct: 364  RYLCGTLNTSLHLIKSPDFSIKGFCDADWGSNLEDRKSTTGYVIYLGANPISWSSKKQQA 423

Query: 1238 ISRSSTEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRT 1417
            +SRS+TEAEYRS+A +T ++ W+++LL EL+     K +I+ DNL A+ L+ NP+ H++T
Sbjct: 424  VSRSTTEAEYRSIAAITAEMTWLKNLLYELHIPTTSKPIIYCDNLSAVLLSTNPILHTKT 483

Query: 1418 KHLEIDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSLEL 1597
            KH EIDL+F+RD+V    +AVQ++PS +Q +DILTK LS   F+  +NKL V    +L L
Sbjct: 484  KHFEIDLYFVRDQVQKKQLAVQHIPSSEQTTDILTKALSFPAFNHCKNKLRVRLHPTLSL 543

Query: 1598 R 1600
            R
Sbjct: 544  R 544


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  548 bits (1412), Expect = 0.0
 Identities = 284/532 (53%), Positives = 369/532 (69%), Gaps = 4/532 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +KAGI KP++  T L    EP   ++AL+   W  AM QEY ALL N TW L  LP NK 
Sbjct: 5    AKAGIVKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLPPNKT 64

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WVF+ K N DG++ KYKARLVAKG+ Q  G DY ETFSPVVKP TIR+IL++A++
Sbjct: 65   AIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILTLALT 124

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
            H W ++QLDV NAFLNG++  E+YM QPPGF +              YGLKQA RAW  K
Sbjct: 125  HHWSIQQLDVNNAFLNGNLQEEVYMSQPPGF-ESSDKTLVCKLHKAIYGLKQAPRAWFDK 183

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
              +TL  L F +SK D SL+   +  + I IL YVDDI+ITG+N+  +Q +I QL   FS
Sbjct: 184  LKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSSTLQNIIAQLNSAFS 243

Query: 722  LKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LKDLG+L++FLGIE      G L L+Q KY+ DLL++  M  +  +++PMVS   LS+  
Sbjct: 244  LKDLGRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPISSPMVSGCKLSRTG 303

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
                 D  LYRS+VG LQYAT+TRP+ISFSVN+V QFM NPL++HW AVKRILRYL GT+
Sbjct: 304  SEKFLDVTLYRSVVGALQYATITRPEISFSVNKVCQFMSNPLEQHWSAVKRILRYLKGTM 363

Query: 1079 DYGLNF---TASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
              GL+     ++S  +I A+ D+DWASD DDRRSTSG  +F+G NL+SW SKKQ  ++RS
Sbjct: 364  FLGLHLQPAPSNSPLSIRAYCDADWASDPDDRRSTSGASIFVGPNLISWWSKKQTVVARS 423

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            S EAEYRSLAL T ++LWIQ+LL EL+ + +   V++ DN+  ++LA NPV H+RTKH+E
Sbjct: 424  SAEAEYRSLALATAEVLWIQTLLSELHVS-HHTPVVYCDNMSTVALAHNPVLHARTKHME 482

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRS 1585
            +DL F+R+KVA NS+ V +VP++DQ +DILTK LS   F  LR KL ++  S
Sbjct: 483  LDLFFVREKVAANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKLVDSS 534


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  547 bits (1409), Expect = 0.0
 Identities = 284/535 (53%), Positives = 372/535 (69%), Gaps = 6/535 (1%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            SK+GIHKPK Y + L   +EP  +++AL  P+W +AM QEY ALLKN+TW L  LP ++ 
Sbjct: 5    SKSGIHKPK-YPSVLLAQSEPKNVKQALKDPKWLEAMKQEYSALLKNNTWTLVQLPPDRN 63

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WVF+ K N DGS+ +YKARLVAKG+ Q  GFD+ ETFSP++KP TIR+IL++A+S
Sbjct: 64   AIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPIIKPVTIRLILTLAIS 123

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
            + W + QLDV NAFLNG ++  +YM+QPPGF +              YGLKQA R W  +
Sbjct: 124  NHWDIHQLDVNNAFLNGSLNETVYMQQPPGF-EVPDSTLVCKLNKALYGLKQAPRQWFER 182

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
               TL+  GF  SK D SL+      + + +L YVDDI+ITG++ Q  Q +IDQL   FS
Sbjct: 183  LQYTLLQFGFKASKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSFQFTQQLIDQLNSIFS 242

Query: 722  LKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LK LGKL+YFLGIE  H  +G + L+Q KY+ DLL +  M+ A  +++PMVSS  LSK  
Sbjct: 243  LKQLGKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAISSPMVSSCKLSKHG 302

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
               + DS  YRS+VG LQYAT+TRP++SF+VN+V QFM +PL+ HW AVKRILRYL GT+
Sbjct: 303  SDTLADSTFYRSVVGALQYATITRPELSFAVNKVCQFMAHPLESHWNAVKRILRYLKGTM 362

Query: 1079 DYGLNFTAS---SSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
             YGL+   +     F++ A+ D+DWA+D DDRRSTSG  +FLG NL+SW S+KQP ++RS
Sbjct: 363  FYGLHLQPARVHQPFSLYAYCDADWAADPDDRRSTSGAAIFLGPNLISWWSRKQPVVARS 422

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            STEAEYRSLA  T ++LWIQ+LL EL    +    I+ DN   +SLA NPV HSRTKH+E
Sbjct: 423  STEAEYRSLAQATSEVLWIQTLLHELRVPFS-TPTIYCDNQSTVSLAHNPVLHSRTKHME 481

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHV--LPRSS 1588
            I+L F+R+KV  N + VQ++P+ DQ +D LTK LS   F  LR+KL V  LP SS
Sbjct: 482  INLFFVREKVLANQLTVQHIPASDQWADALTKPLSSTRFLILRDKLKVVELPFSS 536


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  564 bits (1453), Expect = 0.0
 Identities = 288/529 (54%), Positives = 372/529 (70%), Gaps = 4/529 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +K GI KP++  T L    EP T ++ALS P W  AM  EY ALL N+TW L PLP ++ 
Sbjct: 541  AKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRT 600

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WVF+ K N +GS+ KYKARLVAKG+ Q  GFDY ETFSPV+KP T+R+IL++A++
Sbjct: 601  AIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALT 660

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
            H W ++QLDV NAFLNG ++ E+YM+QPPGF +              YGLKQA RAW  K
Sbjct: 661  HRWPIQQLDVNNAFLNGTLEEEVYMQQPPGF-EASDKNLVCKLHKAIYGLKQAPRAWFDK 719

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
              STL+ L F  SK D SL+    G + I IL YVDDI+ITG+N+  +  ++ QL   FS
Sbjct: 720  LKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNSSILHTLVSQLHSIFS 779

Query: 722  LKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LKDLG L++FLGIE   +P G L L+Q KY+ DLL++  M G+K +++PM+S   LSK  
Sbjct: 780  LKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMISGSKLSKVG 839

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
                 D+ LYRS+VG LQYAT+TRP+ISFSVN+V QFM +PL  HW AVKRILRYL GT 
Sbjct: 840  SEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYLKGTT 899

Query: 1079 DYGLNF---TASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
             +GL     ++SSS +I A+ D+DWASD DDRRSTSG  +FLG NLVSW SKKQ  ++RS
Sbjct: 900  SWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQTVVARS 959

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            STEAEYRSLAL T ++ WIQ+LL EL  T +   +I+ DNL  ++LA NPV H+RTKH+E
Sbjct: 960  STEAEYRSLALATTEVTWIQTLLSELKVT-HSTPIIFCDNLSTVALAHNPVLHARTKHME 1018

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVL 1576
            +DL F+R+KVA   + V +VP++DQ +D+LTK LS   F  LR+KL V+
Sbjct: 1019 LDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQVV 1067


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  571 bits (1471), Expect = 0.0
 Identities = 280/535 (52%), Positives = 370/535 (69%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +K+GI KPKI+   ++   EP ++  AL   EWK+AM  EY AL +N+TW L PLPA ++
Sbjct: 920  AKSGIVKPKIFIAAIR---EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQ 976

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WV+K K N DG++ KYKARLVAKG+ Q  GFD+TETFSPVVKP+T+R++ +IA+S
Sbjct: 977  AIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALS 1036

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
             +W ++QLDV NAFLNGD+  E++M+QP GF+               YGLKQA RAW  K
Sbjct: 1037 RNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEK 1096

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
                L+  GF  +K+D SL+ R        +L YVDDI++ GS+   I  +I QL   FS
Sbjct: 1097 LHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFS 1156

Query: 722  LKDLGKLNYFLGIEFSHRPHGLFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFDG 901
            LKDLG+++YFLGI+ SH  +GL LSQ KY+ DLL K  M+  K   TP+ +   L   DG
Sbjct: 1157 LKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDG 1216

Query: 902  SPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTLD 1081
             P+ D   YRS VG LQY T+TRP++SFSVN+V QFMQNP ++HWK VKRILRYL GTL 
Sbjct: 1217 DPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQ 1276

Query: 1082 YGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRSSTEA 1261
            +GL+   SS+ ++  F D+DWASDLDDRRSTSG CVFLG NL+SW SKKQ  +SRSS E 
Sbjct: 1277 HGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEI 1336

Query: 1262 EYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLEIDLH 1441
            EYRSLA +  +I W++SLL EL   L K  ++W DNL  + L+ NPV H+RTKH+E+DL+
Sbjct: 1337 EYRSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLY 1396

Query: 1442 FIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSLELRGN 1606
            F+R+KV    + V++VPS DQ++D+LTK +S   F   R+KL +   S+L LRG+
Sbjct: 1397 FVREKVIRKEVEVRHVPSADQLADVLTKTVSSTQFIEFRHKLRIENLSTLSLRGD 1451


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  564 bits (1453), Expect = 0.0
 Identities = 288/529 (54%), Positives = 372/529 (70%), Gaps = 4/529 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +K GI KP++  T L    EP T ++ALS P W  AM  EY ALL N+TW L PLP ++ 
Sbjct: 876  AKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRT 935

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WVF+ K N +GS+ KYKARLVAKG+ Q  GFDY ETFSPV+KP T+R+IL++A++
Sbjct: 936  AIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALT 995

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
            H W ++QLDV NAFLNG ++ E+YM+QPPGF +              YGLKQA RAW  K
Sbjct: 996  HRWPIQQLDVNNAFLNGTLEEEVYMQQPPGF-EASDKNLVCKLHKAIYGLKQAPRAWFDK 1054

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
              STL+ L F  SK D SL+    G + I IL YVDDI+ITG+N+  +  ++ QL   FS
Sbjct: 1055 LKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNSSILHTLVSQLHSIFS 1114

Query: 722  LKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LKDLG L++FLGIE   +P G L L+Q KY+ DLL++  M G+K +++PM+S   LSK  
Sbjct: 1115 LKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMISGSKLSKVG 1174

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
                 D+ LYRS+VG LQYAT+TRP+ISFSVN+V QFM +PL  HW AVKRILRYL GT 
Sbjct: 1175 SEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYLKGTT 1234

Query: 1079 DYGLNF---TASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
             +GL     ++SSS +I A+ D+DWASD DDRRSTSG  +FLG NLVSW SKKQ  ++RS
Sbjct: 1235 SWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPNLVSWWSKKQTVVARS 1294

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            STEAEYRSLAL T ++ WIQ+LL EL  T +   +I+ DNL  ++LA NPV H+RTKH+E
Sbjct: 1295 STEAEYRSLALATTEVTWIQTLLSELKVT-HSTPIIFCDNLSTVALAHNPVLHARTKHME 1353

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVL 1576
            +DL F+R+KVA   + V +VP++DQ +D+LTK LS   F  LR+KL V+
Sbjct: 1354 LDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPTRFCELRSKLQVV 1402


>gb|KYP47651.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  536 bits (1381), Expect = 0.0
 Identities = 280/532 (52%), Positives = 367/532 (68%), Gaps = 4/532 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +KAGI KP++  T L    EP + ++AL+   W  AM QEY ALL N TW L  LP NK 
Sbjct: 5    AKAGIVKPRLQPTLLLTHTEPKSTKQALANDTWLAAMKQEYNALLNNGTWTLVSLPPNKT 64

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WVF+ K N+DG++ KYKARLVAKG+ Q  G DY ETFSPVVKP TIR+IL++A++
Sbjct: 65   AIGCKWVFRIKENLDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILTLALT 124

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
            H W ++QLDV N FLNG+++ E+YM QPPGF +              YGLKQA RAW  K
Sbjct: 125  HHWSIQQLDVNNTFLNGNLEEEVYMSQPPGF-ESSDKALVYKIHKEIYGLKQAPRAWFDK 183

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
              +TL  L F +SK + SL+   +G   I IL YVDDI+ITG+N+  ++ +I QL   FS
Sbjct: 184  LKATLFQLNFQISKCNPSLFVYSHGNHVIYILVYVDDIIITGNNSSILRSIIAQLNSAFS 243

Query: 722  LKDLGKLNYFLGIEFSHRPHGL-FLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LKDLG+L++FLGIE    P G   L+Q KY+ DLL++  M  +  +++PMVS   LSK  
Sbjct: 244  LKDLGRLDFFLGIEAKSNPDGSPTLTQSKYIRDLLNRTNMENSNPISSPMVSGCKLSKTG 303

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
                 D  LYRS+VG LQYAT+TRP ISFSVN+V QFM NPL++HW A+KRILRYL GT+
Sbjct: 304  LKKFIDVTLYRSVVGALQYATITRPKISFSVNKVCQFMSNPLEQHWSAIKRILRYLKGTM 363

Query: 1079 DYGLNF---TASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
              GL+     ++S  +I A+ D+DWASD DD RSTSG  +F+G NL+SW SKKQ  ++RS
Sbjct: 364  FPGLHLQPAPSNSPLSICAYRDADWASDPDDGRSTSGASIFVGPNLISWWSKKQTVVARS 423

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            S EAEYRSLAL T + LWIQ+LL EL+ + +   V++ DN+  +SLA N V H+RTKH+E
Sbjct: 424  SAEAEYRSLALATAEALWIQTLLSELHVS-HHTPVVYCDNMSTVSLAHNHVLHARTKHME 482

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRS 1585
            +DL F+R+KV+ NS+ V +VP++DQ +DILTK LS   F  LR KL ++  S
Sbjct: 483  MDLFFVREKVSANSLHVVHVPAIDQYADILTKALSPSRFCELRTKLKLVDSS 534


>gb|KYP44486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 513

 Score =  535 bits (1377), Expect = 0.0
 Identities = 266/509 (52%), Positives = 355/509 (69%), Gaps = 8/509 (1%)
 Frame = +2

Query: 2    SKAGIHKPKIYTT-------QLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELC 160
            +KAGIHKPK Y          L P  EP +++EA++IP WK+ M +EY AL+KN+TW L 
Sbjct: 5    AKAGIHKPKAYNIVTTTPKLDLNPFHEPRSIKEAMAIPHWKKTMLEEYKALMKNNTWILT 64

Query: 161  PLPANKELIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRI 340
             LPA + LIGCRWVFK K N DGS+ ++KARLVAKG+ Q  GFD++ETFSPVVKPATIRI
Sbjct: 65   TLPAGRNLIGCRWVFKVKTNSDGSINRHKARLVAKGFHQRDGFDFSETFSPVVKPATIRI 124

Query: 341  ILSIAVSHSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQA 520
            ILSI VS SW +RQ+D+ANAFLNGD+  ++YM QPPGF+Q              YGLKQA
Sbjct: 125  ILSIVVSRSWDMRQIDIANAFLNGDLQEDIYMAQPPGFIQTDKSLVCKLQKSL-YGLKQA 183

Query: 521  SRAWSSKFSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVID 700
             RAW  +   +L  +GF  +K D+SL+ R +      IL YVDDI+I GS+   I  V++
Sbjct: 184  PRAWFERLHLSLSRIGFYYAKMDSSLFIRFHKDHITFILVYVDDIIICGSSTSAISSVVE 243

Query: 701  QLQQHFSLKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSS 877
            QLQ  F ++DLG  NYFLGI+    P+  L L+Q KY+ DLL++  M  AK + TPMV+ 
Sbjct: 244  QLQSEFPVRDLGFPNYFLGIQVDQLPNRTLMLTQTKYINDLLNRTNMHMAKPIKTPMVAG 303

Query: 878  PFLSKFDGSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRIL 1057
              L   +G+   +   YRSIVG LQY T+TRP+I+FSVN+V Q+MQ P + HW AVKRIL
Sbjct: 304  LKLQPLEGTAHYEITQYRSIVGSLQYITITRPEIAFSVNKVCQYMQAPRNPHWMAVKRIL 363

Query: 1058 RYLAGTLDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPT 1237
            RYL GTL+  L+   S  F+I  F D+DW S+L+DR+ST+G+ ++LG N +SWSSKKQ  
Sbjct: 364  RYLCGTLNTSLHLIKSPDFSIKGFCDADWGSNLEDRKSTTGYVIYLGANPISWSSKKQQA 423

Query: 1238 ISRSSTEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRT 1417
            +SRS+TEAEYRS+A +T ++ W+++LL EL+     K +I+ DNL A+ L+ NP+ HS+T
Sbjct: 424  VSRSTTEAEYRSIAAITAEMTWLKNLLYELHIPTTSKPIIYCDNLSAVLLSTNPILHSKT 483

Query: 1418 KHLEIDLHFIRDKVADNSIAVQYVPSLDQ 1504
            KH EIDL+F+RD+V    +AVQ++PS +Q
Sbjct: 484  KHFEIDLYFVRDQVQKKQLAVQHIPSSEQ 512


>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1007

 Score =  551 bits (1419), Expect = 0.0
 Identities = 276/541 (51%), Positives = 374/541 (69%), Gaps = 6/541 (1%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLA-----EPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPL 166
            SKAGI KPK Y   L   +     EP+T++EAL+ PEW +AM  EY AL+ N TW L  L
Sbjct: 464  SKAGIFKPKTYAAALVKSSYDHTIEPNTVKEALAKPEWLKAMKDEYQALVSNQTWSLVDL 523

Query: 167  PANKELIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIIL 346
            P   + IGC+W+FK+K N DGS  ++KARLVAKGY Q  G D++ETFSPVVKP T+RI+L
Sbjct: 524  PIGYKPIGCKWIFKSKYNPDGSFQRHKARLVAKGYNQKPGLDFSETFSPVVKPTTVRIVL 583

Query: 347  SIAVSHSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASR 526
            S+A+++ W + Q+D+ N FL+GD+   +YM QPPGF                YGLKQA R
Sbjct: 584  SLAITNQWPIHQIDINNVFLHGDLQESVYMSQPPGF-NTQHKDKVCKLNKAIYGLKQAPR 642

Query: 527  AWSSKFSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQL 706
            +W  K S+TLI +GF  +K+DTSL+ R +  + +++L YVDDI+ITG++ +EI+ VI  L
Sbjct: 643  SWYCKLSNTLIQMGFHSTKSDTSLFVRFSKTTTLMLLIYVDDIIITGNSKEEIRSVISFL 702

Query: 707  QQHFSLKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPF 883
               FSLKDLG L+YFLG+E +    G L L+Q KY+ ++LHKA M  +    TPM+++  
Sbjct: 703  HDKFSLKDLGSLHYFLGVEVTTTKEGNLLLTQTKYLREILHKASMSDSTPQPTPMLANLK 762

Query: 884  LSKFDGSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRY 1063
            L++ + + + D   YRSIVG LQY T+TRPD+SF+VN+V Q+M  P + HWKAVKRILRY
Sbjct: 763  LTENETTSVPDPSFYRSIVGALQYLTITRPDVSFAVNKVCQYMHCPQEHHWKAVKRILRY 822

Query: 1064 LAGTLDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTIS 1243
            L GT+ +GL    +   N++ F DSDW +D DDR+STSG+CV+LG+NL+SWSS+KQ ++S
Sbjct: 823  LQGTIHHGLLIQKNKQLNLAGFCDSDWGNDKDDRKSTSGYCVYLGSNLISWSSRKQKSVS 882

Query: 1244 RSSTEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKH 1423
            RS+TEAEYRS+A V  DI+WIQSLL EL    +    I+ DNL A+ +  NPV HS+TKH
Sbjct: 883  RSTTEAEYRSIADVAADIIWIQSLLSELRVPKSLPR-IYCDNLSAVLITANPVLHSKTKH 941

Query: 1424 LEIDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSLELRG 1603
             E+DLHF+RDKV  N + V ++P+  QV+D LTK L+ Q F   RNKL V    ++ LRG
Sbjct: 942  FELDLHFVRDKVKQNEVKVIHLPAKYQVADTLTKPLAKQHFHHFRNKLMVTTLDTMSLRG 1001

Query: 1604 N 1606
            +
Sbjct: 1002 D 1002


>gb|KYP50571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 553

 Score =  534 bits (1376), Expect = 0.0
 Identities = 283/544 (52%), Positives = 363/544 (66%), Gaps = 11/544 (2%)
 Frame = +2

Query: 2    SKAGIHKPKIY--TTQLQ----PLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCP 163
            SK GI KPK Y  TT  Q    P  EP T++EAL+IP WKQAM QEY AL+ N TW L  
Sbjct: 5    SKHGIFKPKTYEVTTPTQKLHDPFKEPKTIKEALAIPNWKQAMDQEYNALIHNKTWVLTH 64

Query: 164  LPANKELIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRII 343
            LP    L+GC+W+FK K N DG++ ++KARL+AKG+ Q  G D+TETF PVVKP TIR +
Sbjct: 65   LPVGANLVGCKWIFKVKTNADGTINRHKARLMAKGFNQQSGLDFTETFIPVVKPITIRTV 124

Query: 344  LSIAVSHSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQAS 523
            L+IA+S +W LRQLD+ANAFLNGD+   +YM QPPGF                YGLKQA 
Sbjct: 125  LTIALSLNWSLRQLDIANAFLNGDLQETIYMAQPPGFTNGDKNMVCKLQKFL-YGLKQAP 183

Query: 524  RAWSSKFSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQ 703
            RAW  K   TL  LGF+ +K+D SL++R    + ILIL YVDD++I+GS+  EI  V+  
Sbjct: 184  RAWFQKLHDTLSVLGFNYAKSDCSLFFRITTSNIILILVYVDDLIISGSSQTEIDSVVTH 243

Query: 704  LQQHFSLKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPM---- 868
            LQ  F  +DLG  NYF GI+ +   +  L L+Q KY+ DLL +A M+ AK + T M    
Sbjct: 244  LQTRFPARDLGFPNYFPGIQVTQMSNNSLHLTQTKYINDLLKRANMVTAKPVTTRMFQFR 303

Query: 869  VSSPFLSKFDGSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVK 1048
            V S  L+  D  P  +  LYRSIVG LQY  +TRP+ISFSVN+V QFMQ P   HW+AVK
Sbjct: 304  VVSLKLTNSDKDPCENPSLYRSIVGSLQYLIITRPEISFSVNKVCQFMQEPKATHWQAVK 363

Query: 1049 RILRYLAGTLDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKK 1228
            RILRYL GT   G+  + S++ +I AF D+DW  D+DDR+ST+GFCVFLG N +SWSS+K
Sbjct: 364  RILRYLCGTATTGIVLSKSNNLHIFAFCDADWGVDVDDRKSTTGFCVFLGCNPISWSSRK 423

Query: 1229 QPTISRSSTEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHH 1408
            Q  +SRS+ EAEYRSLA VT +I W+++LL EL     +   I+ DNL A+ LA NP+ H
Sbjct: 424  QQAVSRSTIEAEYRSLAAVTAEITWMKNLLHELQVPNIRTPKIYCDNLSAVLLAANPILH 483

Query: 1409 SRTKHLEIDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSS 1588
            S+TKH E+DL+F+RDKV    I+VQ++PSL+Q +DI TK L+   FS    KL +   S 
Sbjct: 484  SKTKHFELDLYFVRDKVQKREISVQHIPSLEQTADIFTKPLTYPSFSSCMYKLRLHFCSP 543

Query: 1589 LELR 1600
            + LR
Sbjct: 544  ISLR 547


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  526 bits (1356), Expect = e-180
 Identities = 271/528 (51%), Positives = 360/528 (68%), Gaps = 4/528 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            SK+G H P+I+ +     +EP T+++AL+ P W  AM QEY AL+ N TW+L  LP++++
Sbjct: 5    SKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRK 64

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             +GC+WVF+ K N DGS+ K KARLVAKG+ Q  GFD+ ETFSPV+KP TIRIIL++A++
Sbjct: 65   AVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALT 124

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
            ++W+L QLDV NAFLNG ++  +YM QPPGF +              YGLKQA R W +K
Sbjct: 125  NNWNLFQLDVNNAFLNGTLEETIYMVQPPGF-EAGDKSLVCKLNKALYGLKQAPRQWFNK 183

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
               TL   GF  SK D SL+  Q+    I IL YVDDI+ITGS++  IQ + +QL   FS
Sbjct: 184  LKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSSLLIQQITNQLDSIFS 243

Query: 722  LKDLGKLNYFLGIEFSHRP-HGLFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LK LG L+YFLGIE  H P   L L+Q KY+ DLL K  +  A G  +PM S+  LS+  
Sbjct: 244  LKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSG 303

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
                +D   +RS+VG LQYATLTRP+ISF+VN+V QFM  PLD HW AVKRIL+YL GTL
Sbjct: 304  NDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTL 363

Query: 1079 DYGLNF---TASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
             YGL+      +   +++AF D+DWASD+DDRRSTSG  +F G NL+SW S+KQ  I+RS
Sbjct: 364  SYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPNLISWWSRKQRVIARS 423

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            STEAEYRS+A  + ++ WIQ+LL+EL    +   ++  DN  A+++A NPV HS+TKH+E
Sbjct: 424  STEAEYRSIAQASAELTWIQALLQELKVPFSTPTLL-CDNQSAVAIAHNPVFHSKTKHME 482

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHV 1573
            ID+ F+RDKV    + V ++P+LDQ +D+LTK LS   F  L +KL V
Sbjct: 483  IDVFFVRDKVLSKQLLVYHIPALDQWADLLTKPLSAARFEVLWDKLKV 530


>gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 537

 Score =  525 bits (1353), Expect = e-179
 Identities = 274/529 (51%), Positives = 359/529 (67%), Gaps = 4/529 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +K GI KP++  T L    EP T ++ALS P W  AM  EY ALL N TW L PLP ++ 
Sbjct: 5    AKDGIVKPRLQPTLLLTHVEPKTTKQALSNPTWTAAMQTEYNALLHNGTWSLVPLPPHRT 64

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WVF+ K N +G++ KYKA LVAKG+ Q  GFDY ETFSPV+KP T+R+IL++A++
Sbjct: 65   AIGCKWVFRVKENPNGTVQKYKACLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALT 124

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
            H W ++QLDV NAFLNG ++ E+YM QPPGF +              YGLKQA RAW  K
Sbjct: 125  HHWPIQQLDVNNAFLNGTLEEEVYMTQPPGF-EASDKCLVCKLHKAIYGLKQAPRAWFEK 183

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
              STL+   F  SK D SL+   +  + I IL YVDDI+IT +N+  +  ++ QL   FS
Sbjct: 184  LKSTLLQFHFQASKCDPSLFVYSHANNVIYILVYVDDIIITSNNSSILHTLVSQLHSVFS 243

Query: 722  LKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LKDLG L+YFLGIE   +  G L L+Q KY+ DLL++  M   K +++PM+    LSK  
Sbjct: 244  LKDLGDLDYFLGIEVKTQSDGSLILTQSKYIRDLLNRTDMEALKPISSPMIPDSKLSKAG 303

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
                 D+ LYRS+VG LQYAT+TR +ISFSVN+V QFM  PL  H  AVKRILRYL GT 
Sbjct: 304  SEDFLDASLYRSVVGALQYATITRLEISFSVNKVCQFMSYPLAHHCSAVKRILRYLKGTT 363

Query: 1079 DYGLNF---TASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
             +GL+    ++SSS +I A+ D+DWASDLDDRRST G  +FL  NLVSW SKK+  ++RS
Sbjct: 364  SWGLHLQPASSSSSLSIHAYCDADWASDLDDRRSTFGASIFLRPNLVSWWSKKKTVVARS 423

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            ST+AEYRSLAL T ++ WIQ+LL EL    +   +I+ DNL  ++LA NP+ H+RTKH+E
Sbjct: 424  STKAEYRSLALATTEVTWIQTLLSELKVN-HSTPIIFCDNLSTVALAHNPILHARTKHME 482

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVL 1576
            +DL F+R+KVA   + V +VP++DQ +D+LTK LS   F  LR+KL V+
Sbjct: 483  LDLFFVREKVAAKCLQVVHVPAIDQCADVLTKALSPSRFCVLRSKLQVV 531


>gb|KYP34165.1| Copia protein [Cajanus cajan]
          Length = 542

 Score =  522 bits (1345), Expect = e-178
 Identities = 270/537 (50%), Positives = 364/537 (67%), Gaps = 1/537 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +KAGI KPK+Y        EP  + +AL   +WKQAM  EY ALLKN TW+L  LP +++
Sbjct: 5    AKAGIFKPKVYLAT----TEPTNVAQALEHKQWKQAMQAEYDALLKNCTWDLVSLPPDRK 60

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             I C+W+FKNK + DGS+ ++KARLVA+G+ Q  G DYT+TFSPVV+P +IR++L+IAVS
Sbjct: 61   AITCKWIFKNKYSQDGSILRHKARLVARGFNQQPGLDYTDTFSPVVRPVSIRVVLAIAVS 120

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
              W + Q+DV NAFLNGD+  E+YM QP GF Q              YGLKQA RAW  K
Sbjct: 121  KGWPIHQIDVDNAFLNGDLKEEIYMLQPQGFHQGSPNTVCKLRKAI-YGLKQAPRAWFQK 179

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
             + TL  LGF  +K+D SL+   +  + I IL YVDD++IT ++   I+ +I  L Q+F 
Sbjct: 180  LTLTLFRLGFIQAKSDNSLFISTSRTTSIYILVYVDDVIITSNSATAIRGLIQALHQYFP 239

Query: 722  LKDLGKLNYFLGIEF-SHRPHGLFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LKDLG+L++FLGIE  S    G+ LSQ +YV D+L +  M  A+ + TPM  +  L+   
Sbjct: 240  LKDLGRLHHFLGIEVHSDNAGGVHLSQTRYVTDILDRLNMSNARPVKTPMAPASKLTNDG 299

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
                 D   YRSIVG LQY T+TRPDI+++VN++ QFM NPLD HWKA KR+LRYL GTL
Sbjct: 300  TEACQDPSQYRSIVGALQYLTITRPDIAYTVNKLCQFMHNPLDVHWKATKRLLRYLKGTL 359

Query: 1079 DYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRSSTE 1258
             +GL++   +   I A+ DSDWASD +D RSTSG CV+LG+N+VSW +KKQ  +SRSSTE
Sbjct: 360  HHGLHYKKFTDTEIYAYCDSDWASDQEDLRSTSGNCVYLGSNIVSWMAKKQKVVSRSSTE 419

Query: 1259 AEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLEIDL 1438
            AE+RS+A +  +I ++Q+LL EL      + +IW DN GA+ L+ NPV H+RTKH E+DL
Sbjct: 420  AEFRSMASLVAEIQYVQNLLSELGHINKNQPLIWCDNQGAVLLSLNPVLHTRTKHFELDL 479

Query: 1439 HFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSLELRGNE 1609
             FIR++VA   I V+++P+  QV+D+LTK  S   F  LR+KL V  +S+L LRG +
Sbjct: 480  WFIRERVAQGKIVVKHIPARLQVADLLTKAPSTAIFLDLRDKLVVDRQSTLSLRGGK 536


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score =  538 bits (1386), Expect = e-177
 Identities = 274/549 (49%), Positives = 365/549 (66%), Gaps = 4/549 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            SK+GI K K Y T L    EP T+++ L  P WK AM QEY ALLKN TW L P P+N +
Sbjct: 527  SKSGICKKKTYLTSLT--IEPRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAK 584

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
            +I C+WVFK K   +GS+ +YKARLVA+G+ QT G D+ ETFSPVVKP TIR++LSIAVS
Sbjct: 585  IIRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVS 644

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
             +W ++QLDV NAFLNGD+  +++M QPPGF                YGLKQ  RAW  K
Sbjct: 645  SNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDSSCPTHVCRLQKALYGLKQGPRAWFHK 704

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
             SS L+ +GF  S+A+ SL+Y  +    I++L YVDDI+ITGSN   +  +I QL  HF+
Sbjct: 705  LSSFLLQIGFQCSRANASLFYFHSASDIIILLIYVDDILITGSNPSRVHQIISQLSSHFA 764

Query: 722  LKDLGKLNYFLGIEFSHRPHGLFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFDG 901
            L+DLG ++YFLGI+ +   H L L+Q+ Y+  LL +A +  AK  +TP      LS  DG
Sbjct: 765  LRDLGDISYFLGIKVTRLSHALHLNQQHYIHQLLERANLHEAKSASTPGALGKLLSAADG 824

Query: 902  SPIN--DSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGT 1075
             P++  D+  YRS+VG LQY TLTRP+ISF+VNR  Q+M  P   H +A KRILRYL GT
Sbjct: 825  EPLSVLDATHYRSLVGALQYITLTRPEISFAVNRACQYMARPTTSHLQAAKRILRYLKGT 884

Query: 1076 LDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRSST 1255
              +G++  AS S ++  + D DWAS  DD+RSTSGFC+F   NL+SWSS KQ  +SRSS 
Sbjct: 885  ATHGISIHASPSLSLQGYTDVDWASCPDDKRSTSGFCLFFCTNLISWSSTKQRVVSRSSA 944

Query: 1256 EAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLEID 1435
            E+EY +LAL+  ++ W+Q LLKEL        +IW DN+ A +LA N V H+R+KH+EID
Sbjct: 945  ESEYWALALLVAEVSWVQFLLKELCIPQQDTPLIWCDNISATALAANSVFHARSKHIEID 1004

Query: 1436 LHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSLELRGN--E 1609
             HF+RDKV    + +QYVPS DQ++++ TK +    FS  R +L V+PR  + LRG+  +
Sbjct: 1005 FHFVRDKVLHKELLIQYVPSTDQLANVFTKHVPSCQFSAARTRLSVVPR-PVSLRGDDRQ 1063

Query: 1610 SKQASDDSS 1636
            +  + DDSS
Sbjct: 1064 TPMSVDDSS 1072


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  543 bits (1400), Expect = e-177
 Identities = 268/542 (49%), Positives = 367/542 (67%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            +K GI K K+Y +    ++EP T  +A+    W  AM +E+ AL +N+TW L P P+N  
Sbjct: 694  AKNGISKKKVYFSS--HISEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGN 751

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
            +IGC+WV+K K   DG++ +YKARLVA+G+TQTLG +Y ETFSPVVK +TIRIIL++A+S
Sbjct: 752  IIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFSPVVKASTIRIILAVALS 811

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
             +W + QLDV NAFL+GD++  ++M+QPPGF+               YGLKQA RAW +K
Sbjct: 812  FNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNK 871

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
             S++L+G GF  S+AD+S++   +    +++L YVDDI++TGS++ ++   I +L   F+
Sbjct: 872  LSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFA 931

Query: 722  LKDLGKLNYFLGIEFSHRPHGLFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFDG 901
            L+DLG +NYFLGIE         LSQ KY +DLL +  M+ +K   TP +    LS  DG
Sbjct: 932  LRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDG 991

Query: 902  SPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTLD 1081
             P +D+ LYRS VG LQY TLTRPDISF+VN+  QFM  P   HW AVKRILRYL GTL 
Sbjct: 992  EPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLS 1051

Query: 1082 YGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRSSTEA 1261
            YG+    S+S +I  + D+DWAS  DDRRST G+ +FLG NLVSWSS KQ  +SRSS E+
Sbjct: 1052 YGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAES 1111

Query: 1262 EYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLEIDLH 1441
            EYR+LA  T +++WIQ +L+EL  + +   ++W DN  A  LA NPV H+RTKH+E+DLH
Sbjct: 1112 EYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLH 1171

Query: 1442 FIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSLELRGNESKQA 1621
            FIRD V    + +QY+PS +QV+DI TK +S   F   R KL V+P S + LRG++ +  
Sbjct: 1172 FIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQFLSFRTKLSVVP-SPVSLRGDDRRYL 1230

Query: 1622 SD 1627
            +D
Sbjct: 1231 AD 1232


>dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]
          Length = 821

 Score =  528 bits (1360), Expect = e-177
 Identities = 268/531 (50%), Positives = 355/531 (66%), Gaps = 8/531 (1%)
 Frame = +2

Query: 5    KAGIHKPKIYTT------QLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPL 166
            ++GI K K+YT             EP +LEEA++   WK+AM  EY+AL++N TW L P 
Sbjct: 282  QSGIRKEKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPP 341

Query: 167  PANKELIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIIL 346
               + +I C+WV+K K   DGSL +YKARLVAKG+ Q  G DY +TFSPVVK ATIRI+L
Sbjct: 342  QKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVL 401

Query: 347  SIAVSHSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASR 526
            S+AVS  W LRQLDV NAFL+G ++ E+YMEQPPG+ +              YGLKQA R
Sbjct: 402  SLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPR 461

Query: 527  AWSSKFSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQL 706
            AW S+ S+ L  LGF  SKADTSL++ + GQ  I +L YVDDI++  S       ++ +L
Sbjct: 462  AWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQEL 521

Query: 707  QQHFSLKDLGKLNYFLGIEFSHRPHGLFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFL 886
             + F+LKDLG L+YFLGIE      GL LSQ KY  DLL + GM   K ++TP+ +S  L
Sbjct: 522  SKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKL 581

Query: 887  SKFDGSPI--NDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILR 1060
            S  +G+ +   DS  YRS+VG LQY TLTRPDISFS+N+V QF+  P   HW AVKRILR
Sbjct: 582  SVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILR 641

Query: 1061 YLAGTLDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTI 1240
            Y+  T+D GL F  + S  +S F+D+DWA   DDRRST GF VFLG NLVSWS++KQ T+
Sbjct: 642  YVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATV 701

Query: 1241 SRSSTEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTK 1420
            SRSSTEAEY++LA  T +I+W+Q+LL+EL     + A +W DNLGA  L+ NP+ H+RTK
Sbjct: 702  SRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTK 761

Query: 1421 HLEIDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHV 1573
            H+E+D HF+R++VA   + + Y+ + DQV+D  TK +  +     +N L++
Sbjct: 762  HIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNL 812


>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  542 bits (1397), Expect = e-175
 Identities = 278/534 (52%), Positives = 363/534 (67%), Gaps = 4/534 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            SK G  KP ++ T      EP T+++ALS   W +AM QEY AL  N TW L PLP +K 
Sbjct: 896  SKTGHLKPPLFPTINLTTTEPTTVQQALSSIHWTEAMQQEYQALQANKTWSLVPLPPHKR 955

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+W+F+ K N DG++ KYKARLVAKG+ Q  G DY++T+SPVVKP T+R +L+IA++
Sbjct: 956  AIGCKWIFRIKENPDGTINKYKARLVAKGFNQKYGQDYSDTYSPVVKPITVRTVLTIALT 1015

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
              W L QLDV NAFLNG +  ++YM+QP GF+Q              YGLKQA RAW   
Sbjct: 1016 SKWPLIQLDVNNAFLNGQLHEDVYMQQPQGFIQ-GESTLVCKLHKAIYGLKQAPRAWYES 1074

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
             ++TLI  GF  SK D SL        C+LIL YVDDI+ITGS+N  I +++++L   FS
Sbjct: 1075 LTNTLISFGFQQSKCDPSLLIFNKHGCCLLILIYVDDIIITGSSNTAINLIVNKLNATFS 1134

Query: 722  LKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LK LG L YFLGIE    P G L LSQ KY+ D+LH+AGM   KG++TP+ ++  LSK  
Sbjct: 1135 LKQLGTLEYFLGIECKLTPSGALHLSQAKYIRDILHRAGMEDCKGISTPLPANLKLSKTG 1194

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
              P ++  LYRSIVG LQYAT+TRP++ +SV++V QF   PL  HW AVKRILRYL G++
Sbjct: 1195 ADPFDNPTLYRSIVGALQYATITRPELGYSVSKVCQFFAQPLVSHWSAVKRILRYLKGSI 1254

Query: 1079 DYGLNF---TASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
            D+GL     T S+  +I+AF D+DWASD+DDRRSTSG C+F G NLVSW SKKQ  +++S
Sbjct: 1255 DHGLTLLPATTSAPLSINAFCDADWASDIDDRRSTSGACIFFGPNLVSWWSKKQTLVAKS 1314

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            S EAEYRSLA    ++LW+QSLL EL   +    VI+ DN  A++++ NPV HSRTKH+E
Sbjct: 1315 SAEAEYRSLAHAASEVLWLQSLLHELKVPI-PPPVIYCDNQSAVAISHNPVLHSRTKHME 1373

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSL 1591
            +D+ F+R+KV + S+ V Y+P+  QV+DILTK LS   F   R+KL VL  + L
Sbjct: 1374 LDIFFVREKVLNKSLVVSYIPAQLQVADILTKSLSKHLFYNFRSKLRVLSTAEL 1427


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  541 bits (1394), Expect = e-175
 Identities = 280/534 (52%), Positives = 371/534 (69%), Gaps = 4/534 (0%)
 Frame = +2

Query: 2    SKAGIHKPKIYTTQLQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPANKE 181
            SK GI +P++  T L    EP T++ AL+ P W  AM  E  AL  N TW L  LP  ++
Sbjct: 873  SKNGILQPRLNPTLLLSNVEPKTVKSALTDPHWLSAMQAELTALHDNHTWTLVDLPPGRK 932

Query: 182  LIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSIAVS 361
             IGC+WVF+ K N DGS+ KYKARLVAKG+ Q  G D++ETFSPVVKP TIRI+LS+AV+
Sbjct: 933  SIGCKWVFRLKENPDGSINKYKARLVAKGFHQQPGVDFSETFSPVVKPVTIRIVLSLAVT 992

Query: 362  HSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAWSSK 541
              W LRQLD+ NAFLNG ++ ++YM QPPGF++              YGLKQA RAW  +
Sbjct: 993  FQWPLRQLDINNAFLNGMLEEDIYMSQPPGFIEPNSKHLVCKLHKSLYGLKQAPRAWFDR 1052

Query: 542  FSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQHFS 721
             +S L+ LGF  SK D SL+      + + +L YVDDI++TG+++  +Q  I+ L   FS
Sbjct: 1053 LTSVLLKLGFHKSKCDPSLFIFSTPSAIVYMLIYVDDIILTGNSSSLMQQFINHLHATFS 1112

Query: 722  LKDLGKLNYFLGIEFSHRPHG-LFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSKFD 898
            LKDLG L+YFLGIE     +G L LSQ KY+ DLL K  M  +KG++TPM+    L+K  
Sbjct: 1113 LKDLGTLDYFLGIEVKSLSNGRLLLSQHKYISDLLTKVKMEDSKGISTPMIGGQQLAK-T 1171

Query: 899  GSPINDSKLYRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYLAGTL 1078
            G+  ND  LYRS+VG LQYAT+TRP+I+FSVN+VSQFM +P+++HWK VKRILRYL GTL
Sbjct: 1172 GTLFNDPTLYRSVVGALQYATITRPEIAFSVNKVSQFMCSPMEEHWKVVKRILRYLKGTL 1231

Query: 1079 DYGLNFT---ASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISRS 1249
             +GL FT   +SSSFN++AF D+DWA+D +DRRSTS  C++LG NLVSW SKKQ  ++RS
Sbjct: 1232 KHGLVFTPARSSSSFNLTAFTDADWAADPNDRRSTSAACIYLGPNLVSWWSKKQLLVARS 1291

Query: 1250 STEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHLE 1429
            STEAEYR+LA    ++LWIQSLL+EL    N   V+  DN   ++L+ NPV HSR+KH+E
Sbjct: 1292 STEAEYRALAQAVTEVLWIQSLLQELKIRFNTPMVL-CDNQSTVALSHNPVLHSRSKHME 1350

Query: 1430 IDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHVLPRSSL 1591
            +D+ F+R+KV   ++ V ++PS  Q +D+LTK LS + F  LR+KL+V   S +
Sbjct: 1351 LDIFFVREKVISKALVVSHIPSQHQYADLLTKALSPKRFLSLRSKLNVADPSDM 1404


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  539 bits (1388), Expect = e-175
 Identities = 271/529 (51%), Positives = 355/529 (67%), Gaps = 8/529 (1%)
 Frame = +2

Query: 11   GIHKPKIYTTQ------LQPLAEPHTLEEALSIPEWKQAMTQEYVALLKNDTWELCPLPA 172
            G+ KPK+YT             EP+ L EAL    WK AM  EY AL+KN TW L P   
Sbjct: 782  GVRKPKVYTDGTIRYGCFTSSGEPYDLNEALGDVNWKDAMDIEYSALMKNKTWHLVPPKK 841

Query: 173  NKELIGCRWVFKNKINVDGSLAKYKARLVAKGYTQTLGFDYTETFSPVVKPATIRIILSI 352
             + +IGC+WV+K K   DGSL +YKARLVAKGY Q  G DY +TFSPVVK ATIRIILSI
Sbjct: 842  GRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIRIILSI 901

Query: 353  AVSHSWHLRQLDVANAFLNGDIDTELYMEQPPGFVQXXXXXXXXXXXXXXYGLKQASRAW 532
            AVS  W L QLDV NAFL+G ++ E+YM+QPPG+                YGLKQA RAW
Sbjct: 902  AVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAW 961

Query: 533  SSKFSSTLIGLGFSVSKADTSLYYRQNGQSCILILAYVDDIVITGSNNQEIQIVIDQLQQ 712
             S+ S+ L+ LGF  SKADTSL++   G   I +L YVDDI++  S ++  + ++  L +
Sbjct: 962  YSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNK 1021

Query: 713  HFSLKDLGKLNYFLGIEFSHRPHGLFLSQRKYVEDLLHKAGMIGAKGLATPMVSSPFLSK 892
             F+LKDLG LNYFLGIE +    G+ L+Q KY  DLL K GM   K ++TP+ +S  LS 
Sbjct: 1022 EFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSI 1081

Query: 893  FDGSPINDSKL--YRSIVGGLQYATLTRPDISFSVNRVSQFMQNPLDKHWKAVKRILRYL 1066
             +GSP+ +  +  YRSIVG LQY TLTRPDI+FSVN+V QF+  P   HW AVKRILRY+
Sbjct: 1082 HEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYI 1141

Query: 1067 AGTLDYGLNFTASSSFNISAFADSDWASDLDDRRSTSGFCVFLGNNLVSWSSKKQPTISR 1246
                + GL+   S S  +SAF+D+DWA  +DDR+ST GF VFLG+NLVSWS++KQPT+SR
Sbjct: 1142 KQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSR 1201

Query: 1247 SSTEAEYRSLALVTCDILWIQSLLKELNFTLNKKAVIWMDNLGAISLAGNPVHHSRTKHL 1426
            SSTE+EY++LA  T +++W+Q LL E++    + A +W DNLGA  L+ NP+ H+RTKH+
Sbjct: 1202 SSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHI 1261

Query: 1427 EIDLHFIRDKVADNSIAVQYVPSLDQVSDILTKLLSGQFFSRLRNKLHV 1573
            E+D HF+RD+VA   + ++YVP+ DQV+D  TK LS +     +  L++
Sbjct: 1262 EVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLSVRLLENFKVNLNL 1310