BLASTX nr result
ID: Rehmannia27_contig00048736
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00048736
(930 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AKN59247.1| polyprotein [Lychnis mottle virus] 590 0.0
gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2] 588 0.0
gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1] 588 0.0
ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot... 567 0.0
ref|YP_227370.1| helicase [Strawberry latent ringspot virus] 489 e-169
ref|YP_227369.1| protease cofactor [Strawberry latent ringspot v... 82 8e-14
ref|YP_009104369.1| polyprotein [Carrot torradovirus 1] gi|55869... 82 1e-13
ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus] 80 6e-13
ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s... 80 6e-13
gb|ACU01024.1| polyprotein [Tomato chocolate virus] 79 2e-12
gb|AGY34703.1| polyprotein 1 [Mulberry mosaic roll leaf-associat... 78 3e-12
gb|AKA95161.1| polyprotein [Tomato torrado virus] 77 5e-12
gb|ACB47566.1| polyprotein [Tomato torrado virus] 77 5e-12
ref|YP_001039627.1| polyprotein [Tomato torrado virus] gi|317411... 77 5e-12
gb|AIY55496.1| polyprotein [Tomato torrado virus] 77 7e-12
gb|AGR55590.1| polyprotein [Lettuce necrotic leaf curl virus] 77 7e-12
ref|YP_003097229.1| polyprotein [Tomato chocolate spot virus] gi... 73 9e-11
gb|ACX53644.1| polyprotein [Turnip ringspot virus] 73 1e-10
ref|YP_009165993.1| Polyprotein [Tomato necrotic dwarf virus] gi... 73 1e-10
ref|NP_734454.1| NTP-binding domain [Maize chlorotic dwarf virus] 72 2e-10
>gb|AKN59247.1| polyprotein [Lychnis mottle virus]
Length = 2260
Score = 590 bits (1520), Expect = 0.0
Identities = 291/310 (93%), Positives = 294/310 (94%)
Frame = -1
Query: 930 RGLMASPHSIPECVIDLTHMKDLLGEKCSSYKEAFEVGAPVASSPGMLFGSGFIWKILLL 751
R LMASPHS+PECVIDLTHMKDLLG KCS++KEAFEVGAPVASSPGMLFGSGFIWKILLL
Sbjct: 702 RELMASPHSVPECVIDLTHMKDLLGGKCSTFKEAFEVGAPVASSPGMLFGSGFIWKILLL 761
Query: 750 LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYA 571
LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYA
Sbjct: 762 LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYA 821
Query: 570 TVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYIT 391
TVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRK PGAYIT
Sbjct: 822 TVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKAPGAYIT 881
Query: 390 HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYA 211
HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYA
Sbjct: 882 HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYA 941
Query: 210 QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRXXXXXXXXXXXXXLE 31
QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIR LE
Sbjct: 942 QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRLIAPAPLPLNMPNLE 1001
Query: 30 AKGNTCCTSD 1
AKGNTCCTSD
Sbjct: 1002 AKGNTCCTSD 1011
>gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2]
Length = 2209
Score = 588 bits (1517), Expect = 0.0
Identities = 290/310 (93%), Positives = 294/310 (94%)
Frame = -1
Query: 930 RGLMASPHSIPECVIDLTHMKDLLGEKCSSYKEAFEVGAPVASSPGMLFGSGFIWKILLL 751
R LMASPHS+PECVIDLTHMKDLLG KCS++KEAFEVGAPVASSPGMLFGSGFIWKILLL
Sbjct: 651 RELMASPHSVPECVIDLTHMKDLLGGKCSTFKEAFEVGAPVASSPGMLFGSGFIWKILLL 710
Query: 750 LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYA 571
LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTG KSEFLDYIYA
Sbjct: 711 LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGGKSEFLDYIYA 770
Query: 570 TVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYIT 391
TVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYIT
Sbjct: 771 TVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYIT 830
Query: 390 HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYA 211
HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDD+LDSLDYA
Sbjct: 831 HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDLLDSLDYA 890
Query: 210 QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRXXXXXXXXXXXXXLE 31
QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIR LE
Sbjct: 891 QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRLIAPAPLPLNMPNLE 950
Query: 30 AKGNTCCTSD 1
AKGNTCCTSD
Sbjct: 951 AKGNTCCTSD 960
>gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1]
Length = 2205
Score = 588 bits (1515), Expect = 0.0
Identities = 291/310 (93%), Positives = 293/310 (94%)
Frame = -1
Query: 930 RGLMASPHSIPECVIDLTHMKDLLGEKCSSYKEAFEVGAPVASSPGMLFGSGFIWKILLL 751
R LMASPHSIPECVIDLTHMKDLLG KCSS+KEAFEVG VASSPGMLFGSGFIWKILLL
Sbjct: 647 RELMASPHSIPECVIDLTHMKDLLGGKCSSFKEAFEVGTSVASSPGMLFGSGFIWKILLL 706
Query: 750 LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYA 571
LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYA
Sbjct: 707 LCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYA 766
Query: 570 TVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYIT 391
T+GVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYIT
Sbjct: 767 TIGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYIT 826
Query: 390 HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYA 211
HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYA
Sbjct: 827 HFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYA 886
Query: 210 QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRXXXXXXXXXXXXXLE 31
QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIR LE
Sbjct: 887 QTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRLIAPAPLPLNMPNLE 946
Query: 30 AKGNTCCTSD 1
AKGNTCCTSD
Sbjct: 947 AKGNTCCTSD 956
>ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot virus]
gi|58040997|gb|AAW63128.1| 250 kDa polyprotein
[Strawberry latent ringspot virus]
Length = 2227
Score = 567 bits (1461), Expect = 0.0
Identities = 279/311 (89%), Positives = 291/311 (93%), Gaps = 1/311 (0%)
Frame = -1
Query: 930 RGLMASPHSIPECVIDLTHMKDLLG-EKCSSYKEAFEVGAPVASSPGMLFGSGFIWKILL 754
R L+ASPH +PECVIDLTHMKDLL +KC+++K+AFEVGA ASSPGMLFGSGFIWKILL
Sbjct: 668 RELLASPHYVPECVIDLTHMKDLLSPQKCANFKQAFEVGASEASSPGMLFGSGFIWKILL 727
Query: 753 LLCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIY 574
LLCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYT+TG KSEFLDYIY
Sbjct: 728 LLCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTITGEKSEFLDYIY 787
Query: 573 ATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDSRKVPGAYI 394
ATVGVDFQAWR+EV+ELTTATPTSIFLGPQERLKRLR+CKDKADRLILQMDSRKVPGAYI
Sbjct: 788 ATVGVDFQAWRAEVLELTTATPTSIFLGPQERLKRLRACKDKADRLILQMDSRKVPGAYI 847
Query: 393 THFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDY 214
THFN+LLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDY
Sbjct: 848 THFNSLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDY 907
Query: 213 AQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRXXXXXXXXXXXXXL 34
AQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIR L
Sbjct: 908 AQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRLIAPAPLPLNMPNL 967
Query: 33 EAKGNTCCTSD 1
EAKGNTCCTSD
Sbjct: 968 EAKGNTCCTSD 978
>ref|YP_227370.1| helicase [Strawberry latent ringspot virus]
Length = 548
Score = 489 bits (1260), Expect = e-169
Identities = 240/259 (92%), Positives = 245/259 (94%)
Frame = -1
Query: 777 GFIWKILLLLCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTLTGSK 598
GFIWKILLLLCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYT+TG K
Sbjct: 1 GFIWKILLLLCPLSMFGVSKTLSCAKDLITIQGGQDAAGRFFQDIVGGTQEVFYTITGEK 60
Query: 597 SEFLDYIYATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQMDS 418
SEFLDYIYATVGVDFQAWR+EV+ELTTATPTSIFLGPQERLKRLR+CKDKADRLILQMDS
Sbjct: 61 SEFLDYIYATVGVDFQAWRAEVLELTTATPTSIFLGPQERLKRLRACKDKADRLILQMDS 120
Query: 417 RKVPGAYITHFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLID 238
RKVPGAYITHFN+LLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLID
Sbjct: 121 RKVPGAYITHFNSLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLID 180
Query: 237 DVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRXXXXXX 58
DVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIR
Sbjct: 181 DVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGHFDEAEIIRLIAPAP 240
Query: 57 XXXXXXXLEAKGNTCCTSD 1
LEAKGNTCCTSD
Sbjct: 241 LPLNMPNLEAKGNTCCTSD 259
>ref|YP_227369.1| protease cofactor [Strawberry latent ringspot virus]
Length = 719
Score = 82.0 bits (201), Expect = 8e-14
Identities = 39/52 (75%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Frame = -1
Query: 930 RGLMASPHSIPECVIDLTHMKDLLG-EKCSSYKEAFEVGAPVASSPGMLFGS 778
R L+ASPH +PECVIDLTHMKDLL +KC+++K+AFEVGA ASSPGMLFGS
Sbjct: 668 RELLASPHYVPECVIDLTHMKDLLSPQKCANFKQAFEVGASEASSPGMLFGS 719
>ref|YP_009104369.1| polyprotein [Carrot torradovirus 1] gi|558698287|gb|AHA85556.1|
polyprotein [Carrot torradovirus 1]
Length = 2192
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Frame = -1
Query: 612 LTGSKSEFLDYIYATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLI 433
+TG S I A + D W ++V E+T+ Q+ + + KDK L
Sbjct: 296 VTGFASPLSASINAVLNTDLFDWFNKVNEVTSPQNRLNNFASQDFVAKAALLKDKVPLLE 355
Query: 432 LQMDSRKVPGAYITHFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCS 253
+ + T F+ + LD+ L E VG++R+ P C+ +G GK+
Sbjct: 356 AEFAKYPISPFVSTRFSYAVTKLDKILHEATAHKGVGQFRQEPFCVQFFGKPGCGKTTSM 415
Query: 252 QYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAV--SEGGHFDEAEII 79
Y I D+L+ + + R++S + D +WS Y +Q AVL DDFG + S H D + I
Sbjct: 416 NYFITDLLNKMGEPKVNRLYSLSSKDGYWSNYNHQVAVLIDDFGQILDSANQHDDVKDFI 475
>ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]
Length = 1190
Score = 79.7 bits (195), Expect = 6e-13
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Frame = -1
Query: 603 SKSEFLDYIYATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQM 424
S+S+ + I + G++ W +V + +S P + L R R + D + +
Sbjct: 634 SESQAMQTILLSSGINTCGWLEKVAAFHSDVHSSQICIP-DLLLRARQLIETGDTISDLL 692
Query: 423 DSRKVPGAYITH--FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQ 250
+ V +++ L+ L + Q A+ V + P ++ GDS VGKS +
Sbjct: 693 SNSTVSLSFLLRERIKLALRELKEDHTQLQLAVDVSVSSECPFVLFFAGDSGVGKSTAMK 752
Query: 249 YLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGG-HFDEAEIIRX 73
++VLD L Y +T R + RN + FWS Y +AV+YDDF + +G +DEAE+IR
Sbjct: 753 KFREEVLDKLGYPKTARFYPRNPGEKFWSGYLRHTAVIYDDFAQIPQGDMTYDEAELIRI 812
Query: 72 XXXXXXXXXXXXLEAKGNT 16
E KG T
Sbjct: 813 VTNAVVTVPMAIAEEKGRT 831
>ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|sp|Q9WAL8.1|POL1_SDVS5
RecName: Full=RNA1 polyprotein; AltName: Full=P1;
Contains: RecName: Full=Putative helicase; AltName:
Full=Putative NTP-binding protein; Contains: RecName:
Full=Probable picornain 3C-like protease; Short=3C-like
protease; Contains: RecName: Full=Probable RNA-directed
RNA polymerase gi|4589400|dbj|BAA76746.1| polyprotein
[Satsuma dwarf virus]
Length = 2081
Score = 79.7 bits (195), Expect = 6e-13
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Frame = -1
Query: 603 SKSEFLDYIYATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRLILQM 424
S+S+ + I + G++ W +V + +S P + L R R + D + +
Sbjct: 634 SESQAMQTILLSSGINTCGWLEKVAAFHSDVHSSQICIP-DLLLRARQLIETGDTISDLL 692
Query: 423 DSRKVPGAYITH--FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHVGKSVCSQ 250
+ V +++ L+ L + Q A+ V + P ++ GDS VGKS +
Sbjct: 693 SNSTVSLSFLLRERIKLALRELKEDHTQLQLAVDVSVSSECPFVLFFAGDSGVGKSTAMK 752
Query: 249 YLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGG-HFDEAEIIRX 73
++VLD L Y +T R + RN + FWS Y +AV+YDDF + +G +DEAE+IR
Sbjct: 753 KFREEVLDKLGYPKTARFYPRNPGEKFWSGYLRHTAVIYDDFAQIPQGDMTYDEAELIRI 812
Query: 72 XXXXXXXXXXXXLEAKGNT 16
E KG T
Sbjct: 813 VTNAVVTVPMAIAEEKGRT 831
>gb|ACU01024.1| polyprotein [Tomato chocolate virus]
Length = 2155
Score = 78.6 bits (192), Expect = 2e-12
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Frame = -1
Query: 627 EVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDK 448
E+ ++ G K+ L I AT+ D W EV + + ++L +++
Sbjct: 279 EIIVSIFGFKNPILSAISATLSTDLFEWMQEVDAVCDPSLRLENFANPAFTEKLNHLREQ 338
Query: 447 ADRLILQMDSRKVPGAYITH-FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHV 271
A ++ + + V A+++H + + LD+ E + + VG++R P + YG S
Sbjct: 339 ALKISAYIATHPV-AAFLSHRVSASINQLDKIYAENSRHVGVGQYRAEPFMVQWYGASGC 397
Query: 270 GKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEG 106
GKS + I+DVLD + + R+++ + D++WS Y +Q+AVL DD GA+ +G
Sbjct: 398 GKSTAMRLFINDVLDCMGEPKLNRLYAVSKRDAYWSNYAHQTAVLMDDMGALRDG 452
>gb|AGY34703.1| polyprotein 1 [Mulberry mosaic roll leaf-associated virus]
Length = 2102
Score = 77.8 bits (190), Expect = 3e-12
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Frame = -1
Query: 687 IQGGQDAAGRFFQDIVGGTQEVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTTATP 508
++ G+D ++ ++ ++TG +S+F D + A V VD + W ++ ++
Sbjct: 490 LRKGKDVLKELASWLIEVLGRIYDSVTGKESQFFDELSALVQVDVKHWLTQAQQVLLEAQ 549
Query: 507 TSIFLGPQERLKRLRSCKDKADRLILQMDS--RKVPGAYITHFNNLLQSLDRALVECQQA 334
T L R +D ++L+L + RK+ + T N + L + +C +A
Sbjct: 550 TMALTDKVLLLSVSRLVED-GNKLLLGVSGIPRKLTMDFFTLINKVQTDLKKIHEQCVKA 608
Query: 333 LSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDY-AQTGRVFSRNGSDSFWSCY 157
R TP ++LYG SH GKS+ + D +L Y + ++++ +D+FWS Y
Sbjct: 609 GRFEGRRHTPFWLYLYGPSHCGKSLLMEQAADVLLTEAGYPLSSNSLYTKAATDAFWSGY 668
Query: 156 KNQSAVLYDDFGAVSEGGHFDEAEII 79
+ + V+ DD A+ G E+E++
Sbjct: 669 RREYCVMLDDLSAICSNGVSLESEML 694
>gb|AKA95161.1| polyprotein [Tomato torrado virus]
Length = 2158
Score = 77.0 bits (188), Expect = 5e-12
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Frame = -1
Query: 627 EVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTT-ATPTSIFLGPQERLKRLRSCKD 451
E+ + G K+ L I AT+ D W EV + A F P +K L+ ++
Sbjct: 279 EIIVDIFGFKNPVLSAISATLSTDLFTWMEEVDAVCDPAHRLENFANPAFTIK-LQHLRE 337
Query: 450 KADRLILQMDSRKVPGAYITH-FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSH 274
+A ++ + + V A+++H + LD+ E Q VG++R P + YG S
Sbjct: 338 QALKISAYIATHPV-AAFMSHRVTAAIAHLDKIYGENCQHTGVGQYRAEPFMVQWYGASG 396
Query: 273 VGKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEG 106
GKS + I+DVLD ++ + R+++ + D++WS Y +Q+A+L DD GA+ +G
Sbjct: 397 CGKSTSMRLFINDVLDRMEEPKLNRLYAVSKRDAYWSNYAHQTAILMDDMGALRDG 452
>gb|ACB47566.1| polyprotein [Tomato torrado virus]
Length = 2158
Score = 77.0 bits (188), Expect = 5e-12
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Frame = -1
Query: 627 EVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTT-ATPTSIFLGPQERLKRLRSCKD 451
E+ + G K+ L I AT+ D W EV + A F P +K L+ ++
Sbjct: 279 EIIVDIFGFKNPVLSAISATLSTDLFTWMEEVDAVCDPAHRLENFANPAFTIK-LQHLRE 337
Query: 450 KADRLILQMDSRKVPGAYITH-FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSH 274
+A ++ + + V A+++H + LD+ E Q VG++R P + YG S
Sbjct: 338 QALKISAYIATHPV-AAFMSHRVTAAIAHLDKIYGENCQHTGVGQYRAEPFMVQWYGASG 396
Query: 273 VGKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEG 106
GKS + I+DVLD ++ + R+++ + D++WS Y +Q+A+L DD GA+ +G
Sbjct: 397 CGKSTSMRLFINDVLDRMEEPKLNRLYAVSKRDAYWSNYAHQTAILMDDMGALRDG 452
>ref|YP_001039627.1| polyprotein [Tomato torrado virus]
gi|317411796|sp|A1XIP9.1|POL1_TOTV RecName: Full=RNA1
polyprotein; Contains: RecName: Full=Protease-cofactor;
Contains: RecName: Full=Putative helicase; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; Contains: RecName: Full=RNA-directed RNA
polymerase gi|88061911|gb|ABD38934.1| polyprotein
[Tomato torrado virus]
Length = 2158
Score = 77.0 bits (188), Expect = 5e-12
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Frame = -1
Query: 627 EVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTT-ATPTSIFLGPQERLKRLRSCKD 451
E+ + G K+ L I AT+ D W EV + A F P +K L+ ++
Sbjct: 279 EIIVDIFGFKNPVLSAISATLSTDLFTWMEEVDAVCDPAHRLENFANPAFTIK-LQHLRE 337
Query: 450 KADRLILQMDSRKVPGAYITH-FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSH 274
+A ++ + + V A+++H + LD+ E Q VG++R P + YG S
Sbjct: 338 QALKISAYIATHPV-AAFMSHRVTAAIXHLDKIYGENCQHTGVGQYRAEPFMVQWYGASG 396
Query: 273 VGKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEG 106
GKS + I+DVLD ++ + R+++ + D++WS Y +Q+A+L DD GA+ +G
Sbjct: 397 CGKSTSMRLFINDVLDRMEEPKLNRLYAVSKRDAYWSNYAHQTAILMDDMGALRDG 452
>gb|AIY55496.1| polyprotein [Tomato torrado virus]
Length = 2158
Score = 76.6 bits (187), Expect = 7e-12
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Frame = -1
Query: 627 EVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTT-ATPTSIFLGPQERLKRLRSCKD 451
E+ + G K+ L I AT+ D W EV + A F P +K L+ ++
Sbjct: 279 EIIVDIFGFKNPVLSAISATLSTDLFTWMEEVDAVCDPAHRLENFANPAFTIK-LQHLRE 337
Query: 450 KADRLILQMDSRKVPGAYITHFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHV 271
+A ++ + + V + LD+ E Q VG++R P + YG S
Sbjct: 338 QALKISAYIATHPVAAXMSHRVTAAIAHLDKIYGENCQHTGVGQYRAEPFMVQWYGASGC 397
Query: 270 GKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEG 106
GKS + I+DVLD ++ + R+++ + D++WS Y +Q+A+L DD GA+ +G
Sbjct: 398 GKSTSMRLFINDVLDRMEEPKLNRLYAVSKRDAYWSNYAHQTAILMDDXGALRDG 452
>gb|AGR55590.1| polyprotein [Lettuce necrotic leaf curl virus]
Length = 2223
Score = 76.6 bits (187), Expect = 7e-12
Identities = 40/119 (33%), Positives = 62/119 (52%)
Frame = -1
Query: 456 KDKADRLILQMDSRKVPGAYITHFNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDS 277
KDKA + V FN + LD+ L + Q VG++R P C+ LYG
Sbjct: 344 KDKAKYFEAEFVKFPVSPFVTGRFNVAVSKLDKLLTDAQSHKGVGQFRDEPFCLQLYGKP 403
Query: 276 HVGKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEGGH 100
GK++ ++I+D+L+ L T R++S + D +WS Y +Q AVL DDFG + + +
Sbjct: 404 GCGKTMSIGFIIEDLLNRLGEPTTNRLYSLSSKDGYWSNYNHQVAVLIDDFGQILDAAN 462
>ref|YP_003097229.1| polyprotein [Tomato chocolate spot virus]
gi|254733074|gb|ACT79982.1| polyprotein [Tomato
chocolate spot virus]
Length = 2155
Score = 73.2 bits (178), Expect = 9e-11
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Frame = -1
Query: 627 EVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDK 448
E+ + G K+ L I AT+ D W EV + + +L +++
Sbjct: 279 EIIVDMFGFKNPILSAISATLATDLFEWMKEVDAVCDPATRLENFANKAFPTKLNHLREQ 338
Query: 447 ADRLILQMDSRKVPGAYITH-FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHV 271
A ++ + + V A+++H + + L++ E + + VG++R P + +G S
Sbjct: 339 ALKISAYIATHPV-AAFMSHRVSAAINQLEKVYAESCRHMGVGQYRIEPFMVQWFGASGC 397
Query: 270 GKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEG 106
GKS + I+DVLD + + R+++ + D++WS Y +Q+A+L DD GA+ +G
Sbjct: 398 GKSTSMRLFINDVLDRMGEPKLNRLYAVSKRDAYWSNYAHQTAILMDDMGALRDG 452
>gb|ACX53644.1| polyprotein [Turnip ringspot virus]
Length = 1857
Score = 72.8 bits (177), Expect = 1e-10
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Frame = -1
Query: 753 LLCPLSMFGVSKTLSCAKDLITIQGGQDA-AGRFFQDIVGGTQEVFYTLTGSKSEFLDYI 577
+ C ++ + KT + T G A AG+ F G Q+ + + G +S FL
Sbjct: 324 IFCETTLLSMGKTCQAVNQISTCAGNLKAMAGKLF----GILQDFIWKVFGMESRFLRDA 379
Query: 576 YATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDKADRL--ILQMDSRKVPG 403
G D W ++ E + + + +K K D +L++ SR P
Sbjct: 380 SLMFGEDVDQWLKDIAECQDSYLAKAYSSQDDIIKMQALIKKGHDMRSKVLKVTSRISPV 439
Query: 402 AYITHFNNLLQSLDRALVE--CQQALSVGKWRKTPACIWLYGDSHVGKSVCSQYLIDDVL 229
T + +S+++ L E CQ + RK P ++ YG+S GK++ LI D
Sbjct: 440 LANTVTRGV-ESVEKLLRESLCQ---GIKATRKIPFVVYAYGESRTGKTLVVDKLITDFQ 495
Query: 228 DSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVS 112
+ + G V+SRN D +WS Y+ Q V DDFGAV+
Sbjct: 496 NHFGLGK-GTVYSRNPIDQYWSGYRRQPIVSIDDFGAVA 533
>ref|YP_009165993.1| Polyprotein [Tomato necrotic dwarf virus]
gi|603146655|gb|AHU86525.1| Polyprotein [Tomato necrotic
dwarf virus]
Length = 2150
Score = 72.8 bits (177), Expect = 1e-10
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Frame = -1
Query: 627 EVFYTLTGSKSEFLDYIYATVGVDFQAWRSEVMELTTATPTSIFLGPQERLKRLRSCKDK 448
E+ G K+ L I AT+ D W EV + + +L +++
Sbjct: 276 EIIVGAFGFKNPVLSAISATLSTDLFEWMQEVDAVCDPATRLENFANKAFPDKLNHLREQ 335
Query: 447 ADRLILQMDSRKVPGAYITH-FNNLLQSLDRALVECQQALSVGKWRKTPACIWLYGDSHV 271
A ++ + + V A+++H + + L++ E + + VG++R P + YG S
Sbjct: 336 ALKISAYIATHPV-AAFMSHRVSAAITQLEKVYAESCRHVGVGQYRIEPFMVQWYGASGC 394
Query: 270 GKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVLYDDFGAVSEG 106
GKS + I+DVLD + + R+++ + D++WS Y +Q+AVL DD GA+ +G
Sbjct: 395 GKSTAMRLFINDVLDRMGEPKLNRLYAVSKRDAYWSNYAHQTAVLMDDMGALRDG 449
>ref|NP_734454.1| NTP-binding domain [Maize chlorotic dwarf virus]
Length = 1127
Score = 72.0 bits (175), Expect = 2e-10
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Frame = -1
Query: 492 GPQERLKRLRSCKDKADRLILQM-DSRKVPGAYITHFNNLLQSLDRALVECQQALSVGKW 316
G E+L R+R DK+ + ++ D KVP A + + + + L + +
Sbjct: 317 GSPEQLTRVRHMYDKSLEITNKLLDRNKVPVAMLPVIRDTCKKCEELLNDSYSYKGMKTP 376
Query: 315 RKTPACIWLYGDSHVGKSVCSQYLIDDVLDSLDYAQTGRVFSRNGSDSFWSCYKNQSAVL 136
R P I L G VGKS + +I+D+LD + +T R+++R +DS+WS Y ++ ++
Sbjct: 377 RIDPFYICLTGPPGVGKSTVASIIINDLLDYMGEPKTDRIYTRCCADSYWSNYHHEPVII 436
Query: 135 YDDFGAVSEGGHF-DEAEIIRXXXXXXXXXXXXXLEAKGNTC 13
YDD GA+S+ D AEI+ +E KG C
Sbjct: 437 YDDLGAISKVASLSDYAEIMGIKSNRPYSLPMAAVEEKGRHC 478