BLASTX nr result
ID: Rehmannia27_contig00048374
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00048374
(496 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposo... 95 2e-21
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 98 7e-21
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 98 9e-21
gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irr... 89 3e-20
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera] 95 6e-20
emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera] 88 7e-20
emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera] 95 7e-20
ref|XP_013639641.1| PREDICTED: retrovirus-related Pol polyprotei... 92 8e-20
gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposo... 93 8e-20
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 95 1e-19
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 95 1e-19
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 94 2e-19
dbj|BAT73418.1| hypothetical protein VIGAN_01089700 [Vigna angul... 87 4e-19
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 93 5e-19
ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455... 90 6e-19
gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposo... 91 6e-19
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 92 1e-18
ref|XP_013448653.1| F-box/RNI/FBD-like domain protein [Medicago ... 90 1e-18
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 92 1e-18
gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposo... 89 2e-18
>gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 194
Score = 94.7 bits (234), Expect = 2e-21
Identities = 44/77 (57%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -2
Query: 465 VFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYNPADMGTKCLP 286
++ D+QS I L KN V H+RTKH+DV+FHF+RD+V+ ++ +EKVA+E N ADM TK LP
Sbjct: 118 IYCDNQSAICLTKNQVHHERTKHVDVKFHFVRDVVASDVVKIEKVATEENAADMLTKALP 177
Query: 285 LSKFKTCLKILNF-DTG 238
+KF+ CLK+LN DTG
Sbjct: 178 SNKFEFCLKLLNVTDTG 194
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 98.2 bits (243), Expect = 7e-21
Identities = 44/84 (52%), Positives = 63/84 (75%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+ L V +FSDSQS I+LCKN +FH+RTKH+DVR+HFIR+ VS G + LEK+++ N
Sbjct: 718 ELRVLNIVVEIFSDSQSAIELCKNLMFHERTKHVDVRYHFIRETVSSGAMKLEKISTTDN 777
Query: 315 PADMGTKCLPLSKFKTCLKILNFD 244
PA+M TK LP+ K++ CL ++ +
Sbjct: 778 PANMATKVLPIRKYRYCLDLVQVE 801
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 97.8 bits (242), Expect = 9e-21
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+ L V +F DSQS IQLC NP FH RTKHIDVR+HFIR+ +S G + LEK++ N
Sbjct: 687 ELXVLNSVVEIFLDSQSAIQLCNNPXFHXRTKHIDVRYHFIRETISSGAMKLEKISXVDN 746
Query: 315 PADMGTKCLPLSKFKTCLKIL 253
PADM TK LP++KFK L ++
Sbjct: 747 PADMATKVLPVTKFKYSLDLV 767
>gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irregularis DAOM
197198w]
Length = 103
Score = 89.0 bits (219), Expect = 3e-20
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = -2
Query: 465 VFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYNPADMGTKCLP 286
+F DSQS I L K+ +FH+RTKHIDVR+HFIRD++SKG I ++K+++ NPADM TK +P
Sbjct: 29 IFCDSQSAIYLTKDQMFHERTKHIDVRYHFIRDVISKGDIQVQKISTHDNPADMMTKPVP 88
Query: 285 LSKFKTCLKIL 253
+KF+ C ++
Sbjct: 89 ATKFELCSSLV 99
>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
Length = 421
Score = 94.7 bits (234), Expect = 6e-20
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+G L V +F +SQS IQLCKN VFH+RTKH+DVR+HFIR+IVS G + LEK+++ N
Sbjct: 346 ELGVLNSVVEIFLNSQSAIQLCKNLVFHERTKHVDVRYHFIREIVSLGAVKLEKISTTDN 405
Query: 315 PADMGTKCLPLSKFK 271
ADM TK L +SKF+
Sbjct: 406 SADMATKVLLVSKFR 420
>emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera]
Length = 104
Score = 88.2 bits (217), Expect = 7e-20
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+ K KVVV+ D+QS I L KN FH+R KHIDVR HF+RDI+ G I + K+ E N
Sbjct: 19 ELAMYKGKVVVYCDNQSAIHLAKNQSFHERFKHIDVRLHFVRDIIIAGKIGVGKIHIEDN 78
Query: 315 PADMGTKCLPLSKFKTCLKILN 250
P+DM TK L ++KF CL ++N
Sbjct: 79 PSDMLTKSLNVTKFNHCLNLVN 100
>emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]
Length = 626
Score = 95.1 bits (235), Expect = 7e-20
Identities = 40/81 (49%), Positives = 61/81 (75%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+G+ ++ V VF D+QS I L +NP+FH+R+KHIDV+ HFIR+ +S G + +K+A+E N
Sbjct: 531 EMGYKQETVTVFCDNQSAIYLVRNPMFHERSKHIDVKLHFIREXISSGAVKFDKIATEEN 590
Query: 315 PADMGTKCLPLSKFKTCLKIL 253
P D TK LP++KF+ CL ++
Sbjct: 591 PTDALTKSLPVAKFELCLNLI 611
>ref|XP_013639641.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Brassica oleracea var. oleracea]
Length = 255
Score = 92.0 bits (227), Expect = 8e-20
Identities = 41/81 (50%), Positives = 62/81 (76%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+GF + V VF DSQS I L +NPV H++TKH+DV+++F+R++VS+ II + K+A++YN
Sbjct: 170 ELGFEQDLVEVFCDSQSAIALSRNPVHHEKTKHVDVKYNFVRELVSEKIIDVVKIATQYN 229
Query: 315 PADMGTKCLPLSKFKTCLKIL 253
PAD+ TK LP+ K + L+ L
Sbjct: 230 PADIFTKVLPVGKMREALRFL 250
>gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 93.2 bits (230), Expect = 8e-20
Identities = 43/77 (55%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 465 VFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYNPADMGTKCLP 286
++ D+QS I L KN V H+RTKH+DV+FHF+RD+V+ ++ +EKVA+E N DM TK LP
Sbjct: 246 IYCDNQSAICLTKNQVHHERTKHVDVKFHFVRDVVASDVVKIEKVATEENAVDMLTKALP 305
Query: 285 LSKFKTCLKILNF-DTG 238
+KF+ CLK+LN DTG
Sbjct: 306 SNKFEFCLKLLNVTDTG 322
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 94.7 bits (234), Expect = 1e-19
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+G ++ V VF DSQS + L KN FH+RTKHIDVRFHFIRDI +G++ + K++++ N
Sbjct: 854 ELGMNQKSVTVFCDSQSALCLTKNQGFHERTKHIDVRFHFIRDIAEQGLVNVSKISTKDN 913
Query: 315 PADMGTKCLPLSKFKTCLKILN 250
PADM TK + KFK CL ++N
Sbjct: 914 PADMLTKPISKVKFKQCLNLIN 935
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 94.7 bits (234), Expect = 1e-19
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+G L V +FSDSQS IQLCKN VFH+RTKH++VR+HFIR+IVS + LEK++ N
Sbjct: 1762 ELGVLNSVVEIFSDSQSTIQLCKNXVFHERTKHVNVRYHFIREIVSSRKMKLEKISLADN 1821
Query: 315 PADMGTKCLPLSKFKTCLKIL 253
P DM TK LP+ KF L ++
Sbjct: 1822 PIDMATKVLPVRKFXYYLDLV 1842
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = -2
Query: 492 IGFL---KQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASE 322
+GF+ +++ V +SDSQ+ I K+P +H+RTKHID + +FIRDI+++ + L+ + +
Sbjct: 1149 VGFIIQGQERKVFYSDSQATIAYVKDPKYHERTKHIDTKNNFIRDIIARNEVILKYLPTX 1208
Query: 321 YNPADMGTKCLPLSKFKTCLK 259
AD TK + F +K
Sbjct: 1209 EMVADPFTKSISRDMFXIHVK 1229
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 94.0 bits (232), Expect = 2e-19
Identities = 43/81 (53%), Positives = 63/81 (77%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+GF+++ V + DSQS I L KN V+H+RTKHIDV++HFIRD+V+ G + + K+ +E N
Sbjct: 1052 ELGFVQKTVNIHCDSQSAIALAKNAVYHERTKHIDVKYHFIRDLVNNGEVQVLKIDTEDN 1111
Query: 315 PADMGTKCLPLSKFKTCLKIL 253
PAD+ TK LP+SKF+ L++L
Sbjct: 1112 PADIFTKVLPVSKFQDALELL 1132
>dbj|BAT73418.1| hypothetical protein VIGAN_01089700 [Vigna angularis var.
angularis]
Length = 120
Score = 86.7 bits (213), Expect = 4e-19
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+GF+++K V+ SDSQS I L KN FH RTKHID+R+HFIR ++ ++ L K+ N
Sbjct: 36 ELGFIQEKTVLHSDSQSAIHLAKNSTFHSRTKHIDLRYHFIRSLLEDEVLTLRKILGSKN 95
Query: 315 PADMGTKCLPLSKFKTC 265
PADM TK + K + C
Sbjct: 96 PADMLTKVVTTEKLRLC 112
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 92.8 bits (229), Expect = 5e-19
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+ K KVVV+ D+QS I L KN FH+R+KHIDVR HF+RDI++ G I + KV ++ N
Sbjct: 650 ELAMYKGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGEIGVGKVPTKDN 709
Query: 315 PADMGTKCLPLSKFKTCLKILN 250
P+DM TK L ++KFK CL ++N
Sbjct: 710 PSDMLTKSLNVTKFKHCLNLIN 731
>ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455257 [Malus domestica]
Length = 253
Score = 89.7 bits (221), Expect = 6e-19
Identities = 44/83 (53%), Positives = 57/83 (68%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
++G + V V DSQS I L KN V H RTKHIDVRFHF+R+I+ G I L+K+ + N
Sbjct: 167 DLGVQQDHVNVHCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIDDGDILLQKIETADN 226
Query: 315 PADMGTKCLPLSKFKTCLKILNF 247
PADM TK + L KFK CL +++F
Sbjct: 227 PADMLTKPVSLHKFKHCLDLIDF 249
>gb|KYP72642.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 296
Score = 90.5 bits (223), Expect = 6e-19
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
++G + +V + DSQS I L + +H+RTKHID+R+HFIRD++ I + K+A+E N
Sbjct: 212 DLGINQSRVTINCDSQSAIHLANHHTYHERTKHIDIRYHFIRDMIETRKIQVLKIATEDN 271
Query: 315 PADMGTKCLPLSKFKTCLKILNFDT 241
PADM TK LP +KFK CL ++NF +
Sbjct: 272 PADMLTKSLPRAKFKHCLDLINFSS 296
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 92.0 bits (227), Expect = 1e-18
Identities = 42/81 (51%), Positives = 61/81 (75%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
+ G+ ++ V +F DSQS I L KN V H+RTKHIDV+FHFIR+I++ G + + K+++E N
Sbjct: 1278 DFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKN 1337
Query: 315 PADMGTKCLPLSKFKTCLKIL 253
PAD+ TK LP++KF+T L L
Sbjct: 1338 PADIFTKVLPVNKFQTALDFL 1358
>ref|XP_013448653.1| F-box/RNI/FBD-like domain protein [Medicago truncatula]
gi|657377836|gb|KEH22680.1| F-box/RNI/FBD-like domain
protein [Medicago truncatula]
Length = 293
Score = 89.7 bits (221), Expect = 1e-18
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = -2
Query: 486 FLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYNPAD 307
F ++ V + DSQS I L + V+H+RTKHID+R HF+RD++ I +EKVASE NPAD
Sbjct: 211 FEQKCVRIHCDSQSAIHLANHQVYHERTKHIDIRLHFVRDMIESKEIVVEKVASEENPAD 270
Query: 306 MGTKCLPLSKFKTCLKILNF 247
+ TK LP S+FK CL ++ F
Sbjct: 271 VFTKSLPRSRFKHCLDLIKF 290
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 91.7 bits (226), Expect = 1e-18
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+ + KVVV+ D+QS I L KN FH+R+KHIDVR HF+RDI++ G I + KV ++ N
Sbjct: 1123 ELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDN 1182
Query: 315 PADMGTKCLPLSKFKTCLKILN 250
P+DM TK L ++KFK CL ++N
Sbjct: 1183 PSDMLTKSLNVTKFKHCLNLIN 1204
>gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 256
Score = 88.6 bits (218), Expect = 2e-18
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = -2
Query: 495 EIGFLKQKVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHFIRDIVSKGIICLEKVASEYN 316
E+GF+++K ++F DSQS I L KNP FH R+KHIDVR+H IRD + ++ L K+ ++ N
Sbjct: 169 ELGFVQEKYLLFVDSQSAIHLGKNPTFHSRSKHIDVRYHLIRDALDAKLLELAKIHTDDN 228
Query: 315 PADMGTKCLPLSKFKTCLKI 256
ADM TK LP KF+ C +I
Sbjct: 229 GADMMTKALPREKFEICYEI 248