BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00048206
         (456 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075391.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-20
ref|XP_009341960.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_010653936.1| PREDICTED: putative pentatricopeptide repeat...    82   2e-15
ref|XP_015898019.1| PREDICTED: pentatricopeptide repeat-containi...    78   4e-14
ref|XP_008364552.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    75   6e-13
ref|XP_015583544.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-12
gb|EEF28706.1| pentatricopeptide repeat-containing protein, puta...    73   2e-12
ref|XP_010246759.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-09
ref|XP_004305697.2| PREDICTED: putative pentatricopeptide repeat...    64   4e-09
ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-07
ref|XP_007022726.1| Pentatricopeptide repeat-containing protein,...    59   2e-07
ref|XP_008240777.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-07
ref|XP_008444926.1| PREDICTED: pentatricopeptide repeat-containi...    57   9e-07
ref|XP_010678470.1| PREDICTED: pentatricopeptide repeat-containi...    56   2e-06
gb|KYP66570.1| Pentatricopeptide repeat-containing protein At2g1...    56   2e-06
gb|ERN13803.1| hypothetical protein AMTR_s00049p00210240 [Ambore...    54   6e-06

>ref|XP_011075391.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Sesamum indicum]
          Length = 668

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 44/63 (69%), Positives = 56/63 (88%)
 Frame = -3

Query: 190 ILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAH 11
           +LKQ HAS++VS+G+E+SF +ASKL SLY+QF DFGS + +LKA+KEPNSF+WN VIKAH
Sbjct: 1   MLKQIHASVVVSDGQELSFVLASKLISLYVQFDDFGSVMSVLKALKEPNSFLWNSVIKAH 60

Query: 10  VNS 2
           VNS
Sbjct: 61  VNS 63


>ref|XP_009341960.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 727

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 50/103 (48%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
 Frame = -3

Query: 307 KLCLRLLNPHYLKIHKYHYSTYP--FSSSVISVL-NSCRSLQILKQTHASIIVSNGKEVS 137
           KL L LL  H+LK H +H +  P  FSSS  SVL +SC++LQ LKQ HA I+VS G + S
Sbjct: 22  KLAL-LLRTHHLKSHYHHIAPSPSSFSSSSSSVLLHSCQNLQTLKQVHARILVSTGIQPS 80

Query: 136 FAVASKLTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAHV 8
            +  SKL +LY +F D GS+V +  +++EPN+ +WN ++K+HV
Sbjct: 81  -SHFSKLFTLYARFDDLGSAVSVFGSIREPNTMLWNLMMKSHV 122


>ref|XP_010653936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580 [Vitis vinifera]
          Length = 739

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 44/97 (45%), Positives = 66/97 (68%)
 Frame = -3

Query: 292 LLNPHYLKIHKYHYSTYPFSSSVISVLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLT 113
           L   H+L  H Y   ++P+SS    +L+SC +LQ LK+ HAS+IVS+G +   +VASKL 
Sbjct: 37  LFRTHHLNSH-YLTCSFPYSS----LLHSCNNLQALKRIHASLIVSSGFQ-PLSVASKLI 90

Query: 112 SLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAHVNS 2
           +LY Q +DF S+  +  + +EPN+ IWN +IK+HV+S
Sbjct: 91  TLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDS 127


>ref|XP_015898019.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like, partial [Ziziphus jujuba]
           gi|1009160012|ref|XP_015898125.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like, partial [Ziziphus jujuba]
           gi|1009164617|ref|XP_015900594.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like, partial [Ziziphus jujuba]
          Length = 741

 Score = 78.2 bits (191), Expect = 4e-14
 Identities = 45/95 (47%), Positives = 61/95 (64%)
 Frame = -3

Query: 292 LLNPHYLKIHKYHYSTYPFSSSVISVLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLT 113
           LL  H+L   +YH  T   SSS + VLNSCR LQ LKQ HA  +VS G E   ++ASKL 
Sbjct: 38  LLRTHHLT-SRYHNLTTLSSSSHL-VLNSCRDLQTLKQLHARFMVSTGVE-PISLASKLI 94

Query: 112 SLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAHV 8
           + Y QF+D  S+V +   +++PN+  WN +IK+HV
Sbjct: 95  TFYTQFNDLESAVSVFNRLRQPNTSFWNLIIKSHV 129


>ref|XP_008364552.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18750, chloroplastic-like, partial [Malus
           domestica]
          Length = 706

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
 Frame = -3

Query: 307 KLCLRLLNPHYLKIHKYHYSTYPFSSSVIS---VLNSCRSLQILKQTHASIIVSNGKEVS 137
           KL L LL  H+LK H +H +   FSSS +S   +L+SC++L  LK   A I+VS G + S
Sbjct: 21  KLAL-LLRTHHLKSHYHHIAPSLFSSSSLSSSVLLHSCQNLPTLKHVQARILVSTGIQPS 79

Query: 136 FAVASKLTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAHV 8
            +  SKL +LY +F D  S+V +  +++EPN+ +WN ++K+HV
Sbjct: 80  -SHFSKLFTLYARFDDLDSAVSVFGSIREPNTMLWNLMMKSHV 121


>ref|XP_015583544.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Ricinus communis]
          Length = 715

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = -3

Query: 292 LLNPHYLKIHKYHYSTYPFSSSVISVLNSCRSLQILKQTHASIIVSNG--KEVSFAVASK 119
           LL+ HYLK H          SS+ S+L+SC+ L+ LKQ HAS++VS G  + +SF  ++K
Sbjct: 17  LLHSHYLKTHHL--------SSLFSLLHSCKDLRTLKQIHASLLVSTGFNESISFP-STK 67

Query: 118 LTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAHVN 5
           L S Y +F+D  S++ +   ++EPN+  WN +++ H++
Sbjct: 68  LISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLD 105


>gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 726

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = -3

Query: 292 LLNPHYLKIHKYHYSTYPFSSSVISVLNSCRSLQILKQTHASIIVSNG--KEVSFAVASK 119
           LL+ HYLK H          SS+ S+L+SC+ L+ LKQ HAS++VS G  + +SF  ++K
Sbjct: 17  LLHSHYLKTHHL--------SSLFSLLHSCKDLRTLKQIHASLLVSTGFNESISFP-STK 67

Query: 118 LTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAHVN 5
           L S Y +F+D  S++ +   ++EPN+  WN +++ H++
Sbjct: 68  LISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLD 105


>ref|XP_010246759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Nelumbo nucifera]
          Length = 799

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = -3

Query: 235 SSSVIS-VLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVLLLKA 59
           S +V S VL+SC  L+ LKQ HA I+ +  + +S A   KL +LY QF D  S+V + ++
Sbjct: 129 SKTVFSPVLHSCTDLKTLKQVHALILCTGFQPISSA--PKLITLYTQFDDIKSAVSVFRS 186

Query: 58  MKEPNSFIWNEVIKAHVN 5
           + E N+F WN ++KAHV+
Sbjct: 187 LPEANTFTWNSIVKAHVD 204


>ref|XP_004305697.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580, partial [Fragaria vesca subsp. vesca]
          Length = 727

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = -3

Query: 292 LLNPHYLKIHKYHYSTYPFSSSVIS--VLNSCRSLQILKQTHASIIVSNGKEVSFAVASK 119
           LL  H+L    Y      FSSS +S  +L+SC+ L  LKQ HA I+VS+G   +  + SK
Sbjct: 28  LLQTHHLT-SPYSILAPSFSSSSLSHLLLHSCQDLHTLKQVHARILVSSGFRPT-NLFSK 85

Query: 118 LTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAHV 8
           L +LY  F+D GS+  +  ++++P++  WN +IK H+
Sbjct: 86  LLTLYAGFNDLGSAASVFSSIQDPSTMQWNLLIKTHI 122


>ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Cucumis sativus]
           gi|700208923|gb|KGN64019.1| hypothetical protein
           Csa_1G038370 [Cucumis sativus]
          Length = 555

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = -3

Query: 226 VISVLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVLLLKAMKEP 47
           + SVL SC S + L +THA I+VS   + ++ + + L SLYI F   GS+  + + +  P
Sbjct: 30  IFSVLKSCVSFRNLAKTHAQIVVSGFSQKNY-ILNHLLSLYISFGSLGSAQKVFEDITAP 88

Query: 46  NSFIWNEVIKAHVNS 2
           ++ +WN++IK H  S
Sbjct: 89  STTVWNQIIKGHTRS 103


>ref|XP_007022726.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508722354|gb|EOY14251.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 682

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 45/62 (72%)
 Frame = -3

Query: 190 ILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIKAH 11
           ILKQ HAS+I+S G  +  + AS+L S Y  F+D  ++VL++K++K+ ++  WN +IK+H
Sbjct: 9   ILKQLHASLILSFGNFLPTSWASRLISFYAHFNDLETAVLVVKSLKQADTITWNLIIKSH 68

Query: 10  VN 5
           V+
Sbjct: 69  VD 70


>ref|XP_008240777.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Prunus mume]
          Length = 722

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 27/65 (41%), Positives = 47/65 (72%)
 Frame = -3

Query: 196 LQILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVLLLKAMKEPNSFIWNEVIK 17
           LQ L+Q HA I+VS G +   ++ SK+ +LY +F+   S+ L+ ++++EPN+ +WN +IK
Sbjct: 51  LQTLRQVHARILVSTGFKPP-SLLSKVITLYSRFNGVESAALVFRSIQEPNTMLWNLIIK 109

Query: 16  AHVNS 2
           +HV+S
Sbjct: 110 SHVDS 114


>ref|XP_008444926.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Cucumis melo]
          Length = 565

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 28/75 (37%), Positives = 45/75 (60%)
 Frame = -3

Query: 226 VISVLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVLLLKAMKEP 47
           V SVL SC S++ L + HA I+VS   + ++ + S L SLY  F   GS+  + + +  P
Sbjct: 30  VFSVLKSCTSVRNLVKIHAQIVVSGFSQKNY-ILSHLLSLYTSFGSLGSAQKVFEDITAP 88

Query: 46  NSFIWNEVIKAHVNS 2
           ++ +WN++IK H  S
Sbjct: 89  STTVWNQIIKGHARS 103


>ref|XP_010678470.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Beta vulgaris subsp. vulgaris]
           gi|731334928|ref|XP_010678471.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g20540-like [Beta vulgaris subsp. vulgaris]
           gi|731334930|ref|XP_010678472.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g20540-like [Beta vulgaris subsp. vulgaris]
           gi|731334932|ref|XP_010678473.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g20540-like [Beta vulgaris subsp. vulgaris]
           gi|870859318|gb|KMT10774.1| hypothetical protein
           BVRB_5g114300 [Beta vulgaris subsp. vulgaris]
          Length = 551

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/91 (31%), Positives = 49/91 (53%)
 Frame = -3

Query: 274 LKIHKYHYSTYPFSSSVISVLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLTSLYIQF 95
           L+ H+ H         + S+L +C S++ L Q HA I ++     SF +A KL SLY  +
Sbjct: 14  LRAHQQH---------IFSLLKTCNSIKQLTQIHAQIFINGFSHKSFLIA-KLNSLYATY 63

Query: 94  SDFGSSVLLLKAMKEPNSFIWNEVIKAHVNS 2
             F ++  +   M  P++ +WN+VI+ + NS
Sbjct: 64  GYFQNACNMFNEMPNPSTTVWNQVIRGYANS 94


>gb|KYP66570.1| Pentatricopeptide repeat-containing protein At2g13600 family
           [Cajanus cajan]
          Length = 599

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 43/77 (55%)
 Frame = -3

Query: 241 PFSSSVISVLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVLLLK 62
           P  S+ +S+L  C SL+ LKQTH  ++   G EV   V S L  LY +  D  S   +  
Sbjct: 156 PDDSTFVSLLKCCSSLEELKQTHG-LVAKFGAEVDVVVGSALVDLYAKCGDVSSCWKVFD 214

Query: 61  AMKEPNSFIWNEVIKAH 11
           +M+E +SF+W+ +I  +
Sbjct: 215 SMEEKDSFVWSSIISGY 231


>gb|ERN13803.1| hypothetical protein AMTR_s00049p00210240 [Amborella trichopoda]
          Length = 231

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = -3

Query: 250 STYPFSSSVISVLNSCRSLQILKQTHASIIVSNGKEVSFAVASKLTSLYIQFSDFGSSVL 71
           ST P S++   +  SCR    L Q HA ++VS G + +  + +K+ +LYI FSD   + L
Sbjct: 49  STEPTSTAFSMLFQSCRDYNHLTQIHAKVLVS-GFQGNMFMLNKIVALYITFSDLQLAHL 107

Query: 70  LLKAMKEPNSFIWNEVIKAH 11
           +   ++ P  F+WN +I+ +
Sbjct: 108 VFSGVRRPTCFMWNVMIRGY 127