BLASTX nr result
ID: Rehmannia27_contig00048201
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00048201
(461 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_042581948.1| transcriptional regulator [Variovorax parado... 141 4e-41
ref|WP_062362110.1| hypothetical protein [Variovorax paradoxus] 134 3e-38
ref|WP_003054380.1| transcriptional regulator [Comamonas testost... 122 1e-33
ref|WP_021028084.1| transcriptional regulator [Comamonas sp. B-9] 119 2e-32
ref|WP_057034739.1| transcriptional regulator [Burkholderia pseu... 117 7e-32
ref|WP_038713251.1| transcriptional regulator [Burkholderia pseu... 108 2e-28
ref|WP_043876639.1| transcriptional regulator [Ralstonia solanac... 107 7e-28
ref|WP_042625540.1| transcriptional regulator [Burkholderia glumae] 107 7e-28
ref|WP_051415319.1| transcriptional regulator [Burkholderia glumae] 103 4e-26
ref|WP_034194810.1| transcriptional regulator [Burkholderia sp. ... 101 1e-25
emb|CUB01607.1| Helix-turn-helix domain [Comamonas thiooxydans] 85 1e-18
gb|KGG90880.1| hypothetical protein P369_13800 [Comamonas testos... 84 2e-18
gb|ACY32247.1| transcriptional regulator, XRE family [Comamonas ... 84 3e-18
gb|AIJ45920.1| hypothetical protein O987_08925 [Comamonas testos... 84 3e-18
ref|WP_052558874.1| transcriptional regulator [Gemmata sp. IIL30] 82 4e-18
gb|KGH28579.1| hypothetical protein P353_15400 [Comamonas testos... 84 4e-18
emb|CUB01860.1| Transcriptional regulator, contains XRE-family H... 84 4e-18
gb|KQB57494.1| hypothetical protein AE621_20525 [Acidovorax sp. ... 79 1e-16
ref|WP_040329419.1| transcriptional regulator [Acidovorax delafi... 79 1e-16
ref|WP_050686616.1| transcriptional regulator [Nautella italica] 79 1e-16
>ref|WP_042581948.1| transcriptional regulator [Variovorax paradoxus]
gi|755334621|gb|KIQ21942.1| hypothetical protein
RT97_27100 [Variovorax paradoxus]
Length = 90
Score = 141 bits (355), Expect = 4e-41
Identities = 69/83 (83%), Positives = 73/83 (87%)
Frame = -1
Query: 311 MVKTGTSDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALI 132
MVKT +KQKA ELV FGEAVRRRRK LGYSQEAFGDACGIDRSYMGGIERGEHNLALI
Sbjct: 1 MVKTAPPEKQKAPELVLFGEAVRRRRKALGYSQEAFGDACGIDRSYMGGIERGEHNLALI 60
Query: 131 NILKIIEGLGVQPSEFFKDMDKP 63
NILKII L +QPS+FFKD+D P
Sbjct: 61 NILKIIRALDIQPSDFFKDLDTP 83
>ref|WP_062362110.1| hypothetical protein [Variovorax paradoxus]
Length = 91
Score = 134 bits (336), Expect = 3e-38
Identities = 66/90 (73%), Positives = 72/90 (80%)
Frame = -1
Query: 311 MVKTGTSDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALI 132
MVK S K K ELV FGE VRR RK+ GYSQEAFGDACGIDRSYMGGIERGEHNLAL+
Sbjct: 1 MVKESGSSKTKVPELVRFGENVRRLRKERGYSQEAFGDACGIDRSYMGGIERGEHNLALV 60
Query: 131 NILKIIEGLGVQPSEFFKDMDKPVGHARKP 42
NILKI+E L +QPSEFF+ MD P AR+P
Sbjct: 61 NILKIVEALSLQPSEFFRGMDAPPKKARQP 90
>ref|WP_003054380.1| transcriptional regulator [Comamonas testosteroni]
gi|220711695|gb|EED67063.1| transcriptional regulator,
XRE family [Comamonas testosteroni KF-1]
Length = 97
Score = 122 bits (306), Expect = 1e-33
Identities = 62/83 (74%), Positives = 67/83 (80%)
Frame = -1
Query: 311 MVKTGTSDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALI 132
MV+ S K K ELV FGEAVR RRK GYSQEAFGDACGIDRSY+GGIERGEHNLALI
Sbjct: 1 MVRAKESLKNKVPELVRFGEAVRARRKACGYSQEAFGDACGIDRSYIGGIERGEHNLALI 60
Query: 131 NILKIIEGLGVQPSEFFKDMDKP 63
NILKII L +QPSEFF+ +D P
Sbjct: 61 NILKIIATLNLQPSEFFEALDGP 83
>ref|WP_021028084.1| transcriptional regulator [Comamonas sp. B-9]
Length = 86
Score = 119 bits (297), Expect = 2e-32
Identities = 58/81 (71%), Positives = 66/81 (81%)
Frame = -1
Query: 311 MVKTGTSDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALI 132
MV+ + K EL+AFG+AVR RK LGYSQEAFGD CGIDRSYMGGIERGEHNLAL+
Sbjct: 1 MVRKQDTGKTAPPELIAFGKAVRMHRKALGYSQEAFGDECGIDRSYMGGIERGEHNLALV 60
Query: 131 NILKIIEGLGVQPSEFFKDMD 69
NILKII+ L +QPSEFF+ MD
Sbjct: 61 NILKIIKALNLQPSEFFQAMD 81
>ref|WP_057034739.1| transcriptional regulator [Burkholderia pseudomallei]
gi|802718142|emb|CFT66508.1| DNA-binding regulatory
protein [Burkholderia pseudomallei]
Length = 90
Score = 117 bits (294), Expect = 7e-32
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = -1
Query: 287 KQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIEG 108
K + LVAFG+AVRRRRK G SQEAFGD CGIDRSYMGGIERGEHNLALINI+KII+
Sbjct: 11 KPEVPALVAFGKAVRRRRKAKGLSQEAFGDVCGIDRSYMGGIERGEHNLALINIIKIIQA 70
Query: 107 LGVQPSEFFKDMD 69
LG++PSEFF D+D
Sbjct: 71 LGIKPSEFFSDLD 83
>ref|WP_038713251.1| transcriptional regulator [Burkholderia pseudomallei]
Length = 77
Score = 108 bits (271), Expect = 2e-28
Identities = 49/68 (72%), Positives = 61/68 (89%)
Frame = -1
Query: 269 LVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIEGLGVQPS 90
LVAFG VRR RK+ G+SQEAFG+ CGIDRSYMGGIERGEHNLAL+NI+KI++ L +QPS
Sbjct: 10 LVAFGATVRRLRKERGHSQEAFGEMCGIDRSYMGGIERGEHNLALVNIMKIVKALEIQPS 69
Query: 89 EFFKDMDK 66
EFF+++D+
Sbjct: 70 EFFRNLDQ 77
>ref|WP_043876639.1| transcriptional regulator [Ralstonia solanacearum]
Length = 91
Score = 107 bits (268), Expect = 7e-28
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = -1
Query: 311 MVKTGTSDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALI 132
M + ++++ L AFG+ VRR RK+ G+SQEAF D CGIDRSYMGG+ERGE N+AL+
Sbjct: 1 MARIPAPAEERSPFLTAFGQTVRRYRKEKGFSQEAFADVCGIDRSYMGGVERGERNIALV 60
Query: 131 NILKIIEGLGVQPSEFFKDMDKP 63
N+ KII LG+QPSEFF +DKP
Sbjct: 61 NVEKIIRALGMQPSEFFTGLDKP 83
>ref|WP_042625540.1| transcriptional regulator [Burkholderia glumae]
Length = 81
Score = 107 bits (267), Expect = 7e-28
Identities = 50/68 (73%), Positives = 59/68 (86%)
Frame = -1
Query: 269 LVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIEGLGVQPS 90
LVAFG VRR RK+ SQEAFGD CGIDRSYMGGIERGEHNLALINI+KI++ L ++PS
Sbjct: 10 LVAFGATVRRLRKERSLSQEAFGDLCGIDRSYMGGIERGEHNLALINIMKIVQALDIKPS 69
Query: 89 EFFKDMDK 66
EFFK+M++
Sbjct: 70 EFFKNMEE 77
>ref|WP_051415319.1| transcriptional regulator [Burkholderia glumae]
Length = 84
Score = 103 bits (256), Expect = 4e-26
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = -1
Query: 296 TSDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKI 117
+ D K+ L AFG AVR+ RK+ GYSQEAFGD CGIDRSYMGGIERGE N AL+NI+KI
Sbjct: 5 SQDTDKSPLLGAFGAAVRQYRKERGYSQEAFGDLCGIDRSYMGGIERGERNPALVNIMKI 64
Query: 116 IEGLGVQPSEFFKDMD 69
+ L ++PSEFFK +D
Sbjct: 65 VLALDMKPSEFFKALD 80
>ref|WP_034194810.1| transcriptional regulator [Burkholderia sp. WP42]
Length = 72
Score = 101 bits (252), Expect = 1e-25
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = -1
Query: 269 LVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIEGLGVQPS 90
L AFG AVRR RK+ GYSQEAFGD CGIDRSYMGGIERGE N ALINI+KI+ L ++PS
Sbjct: 2 LGAFGAAVRRYRKERGYSQEAFGDLCGIDRSYMGGIERGERNPALINIMKIVRALDMKPS 61
Query: 89 EFFKDMD 69
EFF+ +D
Sbjct: 62 EFFEALD 68
>emb|CUB01607.1| Helix-turn-helix domain [Comamonas thiooxydans]
Length = 107
Score = 84.7 bits (208), Expect = 1e-18
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = -1
Query: 293 SDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKII 114
+D ++ L AFG+AVR RK G+SQE F CG+DRSYMGG+ERGE N+ L N+ +II
Sbjct: 2 TDTDRSPVLKAFGQAVRECRKAQGFSQEGFAHYCGLDRSYMGGVERGERNVTLANMERII 61
Query: 113 EGLGVQPSEFFKDMD 69
L ++PSEFF +D
Sbjct: 62 SALHMKPSEFFLALD 76
>gb|KGG90880.1| hypothetical protein P369_13800 [Comamonas testosteroni]
gi|692366823|gb|KGG98229.1| hypothetical protein
P367_13150 [Comamonas testosteroni]
gi|692375686|gb|KGH06912.1| hypothetical protein
P608_21700 [Comamonas testosteroni]
gi|692381480|gb|KGH12581.1| hypothetical protein
P607_24540 [Comamonas testosteroni]
Length = 107
Score = 84.0 bits (206), Expect = 2e-18
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = -1
Query: 293 SDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKII 114
++ ++ L AFG+AVR R G+SQE F CG+DRSYMGG+ERGE N+ L+N+ +II
Sbjct: 2 TNADRSPVLKAFGQAVRECRSARGFSQEGFAHYCGLDRSYMGGVERGERNVTLVNMERII 61
Query: 113 EGLGVQPSEFFKDMDKPVGHAR 48
L ++PSEFF +D GH R
Sbjct: 62 AALDMKPSEFFLTLD---GHFR 80
>gb|ACY32247.1| transcriptional regulator, XRE family [Comamonas testosteroni
CNB-2] gi|821594405|dbj|GAO68643.1| hypothetical protein
CSE6_002_00800 [Comamonas sp. E6]
Length = 99
Score = 83.6 bits (205), Expect = 3e-18
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -1
Query: 269 LVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIEGLGVQPS 90
L AFG+AVR R G+SQE F CG+DRSYMGG+ERGE N+ L+N+ +II L ++PS
Sbjct: 2 LKAFGQAVRECRSARGFSQEGFAHYCGLDRSYMGGVERGERNVTLVNMERIIAALDMKPS 61
Query: 89 EFFKDMDKPVGHAR 48
EFF +D GH R
Sbjct: 62 EFFLTLD---GHFR 72
>gb|AIJ45920.1| hypothetical protein O987_08925 [Comamonas testosteroni TK102]
Length = 117
Score = 84.0 bits (206), Expect = 3e-18
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = -1
Query: 290 DKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIE 111
+ Q+ LVAFG+ VR R++ G+SQE F CG+DRSY+GG+ERGE N+ L N+ +II
Sbjct: 11 EPQRLPVLVAFGKVVRHLRREQGFSQETFAQYCGLDRSYLGGVERGERNITLANMERIIC 70
Query: 110 GLGVQPSEFFKDMDK 66
L ++PSEFF +D+
Sbjct: 71 ALHLKPSEFFAALDE 85
>ref|WP_052558874.1| transcriptional regulator [Gemmata sp. IIL30]
Length = 74
Score = 82.4 bits (202), Expect = 4e-18
Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = -1
Query: 284 QKASELVAFGEAVRRRRKDLGYS-QEAFGDACGIDRSYMGGIERGEHNLALINILKIIEG 108
+K LV FG+ V++ R++ G+S QEAF DACG+DR+Y+GGIERGE N++LIN+ KI
Sbjct: 3 KKPDTLVRFGKRVQQLRREKGFSSQEAFADACGLDRTYIGGIERGERNVSLINVAKIAAA 62
Query: 107 LGVQPSEFFKDM 72
LG+ SE FK++
Sbjct: 63 LGMSLSELFKEL 74
>gb|KGH28579.1| hypothetical protein P353_15400 [Comamonas testosteroni]
Length = 116
Score = 83.6 bits (205), Expect = 4e-18
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = -1
Query: 293 SDKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKII 114
S+ + L AFG+ VR R++ G+SQE F CG+DRSY+GG+ERGE N+ L ++ +II
Sbjct: 10 SEPPRLPVLQAFGKVVRHLRREQGFSQETFAQYCGLDRSYLGGVERGERNVTLTSMERII 69
Query: 113 EGLGVQPSEFFKDMDKPVGHARKPTR 36
L ++PSEFF +D + +P+R
Sbjct: 70 RALHLKPSEFFAALDADFANLAQPSR 95
>emb|CUB01860.1| Transcriptional regulator, contains XRE-family HTH domain
[Comamonas thiooxydans]
Length = 117
Score = 83.6 bits (205), Expect = 4e-18
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = -1
Query: 290 DKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIE 111
+ Q+ LVAFG VR R++ G+SQE F CG+DRSY+GG+ERGE N+ L N+ +II
Sbjct: 11 EPQRLPVLVAFGRVVRHLRREQGFSQETFAQYCGLDRSYLGGVERGERNITLANMERIIC 70
Query: 110 GLGVQPSEFFKDMDK 66
L ++PSEFF +D+
Sbjct: 71 ALHLKPSEFFAALDE 85
>gb|KQB57494.1| hypothetical protein AE621_20525 [Acidovorax sp. SD340]
Length = 81
Score = 79.0 bits (193), Expect = 1e-16
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = -1
Query: 269 LVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIEGLGVQPS 90
L+A G+A+RR R SQEA D GIDRSYMGGIERGEHN+A+IN+ KI E L V+PS
Sbjct: 14 LIALGDAIRRTRATRNISQEALADLAGIDRSYMGGIERGEHNVAVINLSKIAEALEVRPS 73
>ref|WP_040329419.1| transcriptional regulator [Acidovorax delafieldii]
Length = 81
Score = 79.0 bits (193), Expect = 1e-16
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = -1
Query: 269 LVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIEGLGVQPS 90
L+A G+A+RR R SQEA D GIDRSYMGGIERGEHN+A+IN+ KI E L V+PS
Sbjct: 14 LIAIGDAIRRTRATRNISQEALADLAGIDRSYMGGIERGEHNVAVINLSKIAEALEVRPS 73
>ref|WP_050686616.1| transcriptional regulator [Nautella italica]
Length = 82
Score = 79.0 bits (193), Expect = 1e-16
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = -1
Query: 290 DKQKASELVAFGEAVRRRRKDLGYSQEAFGDACGIDRSYMGGIERGEHNLALINILKIIE 111
D + ++L G +R R G+SQE+F DACG+DR+Y+GG+ERGE NL N+L+I E
Sbjct: 3 DHEFITQLQKLGTTIRELRSARGFSQESFADACGLDRTYVGGVERGERNLGFKNLLRISE 62
Query: 110 GLGVQPSEFFKDMDKPVG 57
L V+PSE D+ G
Sbjct: 63 ALDVEPSELLADISAKSG 80