BLASTX nr result
ID: Rehmannia27_contig00048184
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00048184
(672 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposo... 260 6e-82
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 273 8e-82
gb|KYP48666.1| Retrovirus-related Pol polyprotein from transposo... 252 1e-80
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 265 1e-78
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo... 265 2e-78
gb|KYP49137.1| Retrovirus-related Pol polyprotein from transposo... 258 7e-78
gb|KYP72625.1| Retrovirus-related Pol polyprotein from transposo... 258 1e-76
gb|KYP42321.1| Copia protein [Cajanus cajan] 258 5e-76
gb|KYP51292.1| Retrovirus-related Pol polyprotein from transposo... 242 6e-76
gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposo... 253 4e-75
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 254 1e-74
gb|KYP77128.1| Retrovirus-related Pol polyprotein from transposo... 247 2e-74
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 246 3e-74
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 253 5e-74
gb|KYP38661.1| Retrovirus-related Pol polyprotein from transposo... 246 1e-73
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 251 1e-73
ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794... 250 2e-73
gb|KYP64431.1| Retrovirus-related Pol polyprotein from transposo... 246 2e-73
ref|XP_008356319.1| PREDICTED: uncharacterized protein LOC103420... 247 3e-73
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 250 4e-73
>gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 471
Score = 260 bits (665), Expect = 6e-82
Identities = 132/224 (58%), Positives = 162/224 (72%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
RS R P YL+ + C +T +P G+ + +S ++ N LSS H + +
Sbjct: 25 RSQRIPFSPTYLKDFHCNF---LTSSPQLS---KGISHPLSSVINYNTLSSSHLHYVLSL 78
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S EPK ++QA K EW AM AEI+AL NNTWT+ +L KH IGCK VYKIKY+SD
Sbjct: 79 STHEEPKFYHQAVKSQEWVVAMKAEIDALTANNTWTIVDLTSGKHPIGCKWVYKIKYRSD 138
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
GS+ERYKARLVAKG+TQ EGLDYF+TF+PV K+TTVRL+LAVA+++ W+LHQLDVNNAFL
Sbjct: 139 GSVERYKARLVAKGFTQTEGLDYFETFAPVAKLTTVRLLLAVASSQTWFLHQLDVNNAFL 198
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HGDL EEVYMT+PQG S N VCKL+KSLYGLKQASRQW+ K
Sbjct: 199 HGDLEEEVYMTIPQGVVCSKPNQVCKLHKSLYGLKQASRQWYNK 242
>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 273 bits (698), Expect = 8e-82
Identities = 142/227 (62%), Positives = 166/227 (73%), Gaps = 3/227 (1%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSI---TPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFT 171
RS R + P+YLQ Y C I T PS+ + SG YCI FLS ++LSS HKAF
Sbjct: 549 RSERTKHLPKYLQNYYCGNMTKIDSATQAPSSCSS-SGKPYCIFSFLSDSRLSSKHKAFI 607
Query: 172 AQISKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKY 351
IS EPKT+ Q WQ AMT EI+AL+ N TW L LP NK IGCK VY++K+
Sbjct: 608 YVISSTFEPKTYKQXVSIPHWQTAMTDEIKALKHNKTWDLAILPPNKTAIGCKWVYRVKF 667
Query: 352 KSDGSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNN 531
K+DGS+ERYKARLVAKGYTQ+EGLD+FDT+SPV K+TTVR++LA+AAAK WYLHQLDVNN
Sbjct: 668 KADGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAAAKQWYLHQLDVNN 727
Query: 532 AFLHGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
AFLHGDLNEEVYM LP G+ N VCKL KSLYGL+QASRQW+ K
Sbjct: 728 AFLHGDLNEEVYMQLPLGFSTPNDPRVCKLKKSLYGLRQASRQWYSK 774
>gb|KYP48666.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 312
Score = 252 bits (643), Expect = 1e-80
Identities = 128/224 (57%), Positives = 156/224 (69%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
RSTR + P YL Y C L +I + S ++Y +S LS + L+ F+ I
Sbjct: 21 RSTRHKQAPTYLIDYHCNLLQNIEIHDS-----KNIRYSLSSVLSYHSLNPEFLKFSLSI 75
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
+ EPK + QA + W KAM E+ AL+ N TW LT LP+ K IG K VYKIKY SD
Sbjct: 76 TTEIEPKNYQQAAQSPHWIKAMQEELGALKMNKTWCLTPLPIGKFVIGSKWVYKIKYNSD 135
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
G+L+RYKARLVAKGY Q EGLDYFDTF+PV K+T VRL+LA+A+ K W+LHQLD+NNAFL
Sbjct: 136 GTLQRYKARLVAKGYNQTEGLDYFDTFAPVAKLTIVRLLLALASTKNWFLHQLDINNAFL 195
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HGDL EEVYM +PQG VS+S +VCKL KS+YGLKQASRQWF K
Sbjct: 196 HGDLTEEVYMKVPQGLSVSDSTMVCKLQKSIYGLKQASRQWFAK 239
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 265 bits (678), Expect = 1e-78
Identities = 139/227 (61%), Positives = 165/227 (72%), Gaps = 3/227 (1%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSI---TPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFT 171
RS R + P+YLQ Y C I T PS+ + SG Y I FLS ++LSS HKAF
Sbjct: 855 RSERTKHLPKYLQNYYCGNMTKIDLATQAPSSCSS-SGKPYYIFSFLSDSKLSSKHKAFI 913
Query: 172 AQISKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKY 351
+ IS EPKT+ QA W+ AMT EI+ALE N TW L LP NK IGCK VY++K+
Sbjct: 914 SIISSTFEPKTYKQAVSIPHWKTAMTDEIKALEHNKTWDLAILPPNKTTIGCKWVYQVKF 973
Query: 352 KSDGSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNN 531
K+DGS+ERYKARLVAKGYTQ+EGLD+FDT+SPV K+TTVR++LA+AA K WYLHQLDVNN
Sbjct: 974 KADGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAATKQWYLHQLDVNN 1033
Query: 532 AFLHGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
AFLH DLNE+VYM LP G+ N VCKL KSLYGL+QASRQW+ K
Sbjct: 1034 AFLHEDLNEDVYMQLPPGFSTPNDPRVCKLKKSLYGLRQASRQWYSK 1080
>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1376
Score = 265 bits (677), Expect = 2e-78
Identities = 137/224 (61%), Positives = 165/224 (73%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
RSTR R+PP YLQ Y L + T + GM Y I +++S ++LS+ +AF + I
Sbjct: 802 RSTRLRNPPSYLQDYHHSLTSTSTN------LHPGMLYPIEKYISYSRLSNDFQAFVSSI 855
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S ++EP ++ +A KH W KAM AE+EAL+ N TWTLT LP +K +GC+ +YKIKY +D
Sbjct: 856 SAVSEPHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNAD 915
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
GS+ERYKARLVAKGYTQ EGLDY TFSPV K+TTVRL+LA+AA W+L QLDVNNAFL
Sbjct: 916 GSIERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFL 975
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HGDLNEEVYMTLP G SN VCKL KSLYGLKQASRQWF K
Sbjct: 976 HGDLNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAK 1019
>gb|KYP49137.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 806
Score = 258 bits (659), Expect = 7e-78
Identities = 130/224 (58%), Positives = 161/224 (71%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
RS R + P YL+ Y+C + ++Q G Y I F+S QLS H ++A I
Sbjct: 206 RSIRHKQRPAYLKDYNC--------HTTSQQANQGTSYPIHSFVSFAQLSPAHAVYSASI 257
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S EP +F++ANK W++AM AEI ALE N TWTL LP IG K VYKIK +SD
Sbjct: 258 SDCKEPNSFSEANKLECWKRAMEAEISALENNGTWTLVHLPPGIISIGNKWVYKIKTRSD 317
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
G++ERYKARLVAKGYTQ EGLDY DTFSPV K+TT+R++LA+AA + W++HQLDVNNAFL
Sbjct: 318 GTIERYKARLVAKGYTQIEGLDYLDTFSPVAKLTTIRVVLALAAMQNWHIHQLDVNNAFL 377
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HGDL E++YMT+PQG VS +N VCKL+KSLY LKQASRQWF+K
Sbjct: 378 HGDLREDIYMTIPQGMVVSGTNRVCKLSKSLYRLKQASRQWFEK 421
>gb|KYP72625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1102
Score = 258 bits (660), Expect = 1e-76
Identities = 128/223 (57%), Positives = 162/223 (72%)
Frame = +1
Query: 4 STRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQIS 183
STR R PP+YLQ Y C+ N ++ + S Y +S F++ N S H +F IS
Sbjct: 865 STRIRKPPRYLQEYYCE-------NLASSSAASNCLYPLSSFVTYNNCSPSHTSFCLSIS 917
Query: 184 KLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSDG 363
EP +F +AN W++AM AE++ALEKN TW+L LP K +GCK VY++KYK DG
Sbjct: 918 AQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDG 977
Query: 364 SLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFLH 543
S+ERYKARLVAKG+TQ EG+DYF+TFSPV K++TVR +L++AAA W+LHQLDV+NAFLH
Sbjct: 978 SVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAFLH 1037
Query: 544 GDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
GDL EEVYM P G+ +S+ LVCKL+KSLYGLKQASRQW QK
Sbjct: 1038 GDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQK 1080
>gb|KYP42321.1| Copia protein [Cajanus cajan]
Length = 1456
Score = 258 bits (660), Expect = 5e-76
Identities = 128/223 (57%), Positives = 162/223 (72%)
Frame = +1
Query: 4 STRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQIS 183
STR R PP+YLQ Y C+ N ++ + S Y +S F++ N S H +F IS
Sbjct: 890 STRIRKPPRYLQEYYCE-------NLASSSAASNCLYPLSSFVTYNNCSPSHTSFCLSIS 942
Query: 184 KLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSDG 363
EP +F +AN W++AM AE++ALEKN TW+L LP K +GCK VY++KYK DG
Sbjct: 943 AQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDG 1002
Query: 364 SLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFLH 543
S+ERYKARLVAKG+TQ EG+DYF+TFSPV K++TVR +L++AAA W+LHQLDV+NAFLH
Sbjct: 1003 SVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAFLH 1062
Query: 544 GDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
GDL EEVYM P G+ +S+ LVCKL+KSLYGLKQASRQW QK
Sbjct: 1063 GDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQK 1105
>gb|KYP51292.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 369
Score = 242 bits (617), Expect = 6e-76
Identities = 116/191 (60%), Positives = 145/191 (75%)
Frame = +1
Query: 100 SGMQYCISQFLSANQLSSCHKAFTAQISKLTEPKTFNQANKHLEWQKAMTAEIEALEKNN 279
S Y +S F++ N S H +F IS EP +F +AN W++AM AE++ALEKN
Sbjct: 13 SNCLYPLSSFVTYNNCSPSHTSFCLSISAQHEPTSFKEANSEECWRRAMEAELQALEKNQ 72
Query: 280 TWTLTELPVNKHCIGCK*VYKIKYKSDGSLERYKARLVAKGYTQEEGLDYFDTFSPVTKI 459
TW+L LP K +GCK VY++KYK DGS+ERYKARLVAKG+TQ EG+DYF+TFSPV K+
Sbjct: 73 TWSLVRLPEGKRPVGCKWVYRVKYKVDGSVERYKARLVAKGFTQTEGVDYFETFSPVVKL 132
Query: 460 TTVRLILAVAAAKGWYLHQLDVNNAFLHGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYG 639
+TVR +L++AAA W+LHQLDV+NAFLHGDL EEVYM P G+ +S+ LVCKL+KSLYG
Sbjct: 133 STVRFLLSLAAAHNWFLHQLDVDNAFLHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYG 192
Query: 640 LKQASRQWFQK 672
LKQASRQW QK
Sbjct: 193 LKQASRQWNQK 203
>gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 938
Score = 253 bits (645), Expect = 4e-75
Identities = 129/223 (57%), Positives = 154/223 (69%)
Frame = +1
Query: 4 STRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQIS 183
S R R PP +L+ Y C S T P ++ +LS + LS+ H+ F I
Sbjct: 571 SQRPRRPPHHLKDYVCNHIKSTTNFP------------LANYLSLSNLSNFHQPFLTNII 618
Query: 184 KLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSDG 363
EPK+F+QA K EW++AM EI+ALE NNTW+L LP K IGCK VYKIKY+SDG
Sbjct: 619 GNQEPKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDG 678
Query: 364 SLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFLH 543
S+ERYKA LVAKGYTQ EG+DY DTF+PV K+ TVRL+L++AA K W LHQLDVNNAFL
Sbjct: 679 SIERYKACLVAKGYTQIEGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQ 738
Query: 544 GDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
GDLNEEVYM LP G+ VCKL+KS+YGLKQASRQWF K
Sbjct: 739 GDLNEEVYMKLPPGFSRKGETYVCKLHKSIYGLKQASRQWFSK 781
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 254 bits (649), Expect = 1e-74
Identities = 130/228 (57%), Positives = 160/228 (70%), Gaps = 4/228 (1%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
R TR P YL+ Y C L S+ A + I FLS ++LS +K F+ +
Sbjct: 690 RXTRVSKQPSYLKDYHCSLINSV-----AHVETHSTSHPIQHFLSYDKLSPSYKLFSLSV 744
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S ++EP +F +A + EW+ AM E+EALE+N TW++ L V KH +GCK VYKIK+K+D
Sbjct: 745 SIISEPSSFAKAAEIPEWRAAMDCELEALEENKTWSIVSLXVGKHPVGCKWVYKIKHKAD 804
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
G++ERYKARLVAKGYTQ EG+DY DTFSPV K+ TV+L+LA+AA KGW+L QLDVNNAFL
Sbjct: 805 GTIERYKARLVAKGYTQREGIDYVDTFSPVAKLVTVKLLLAIAAVKGWHLSQLDVNNAFL 864
Query: 541 HGDLNEEVYMTLPQGYPVSN----SNLVCKLNKSLYGLKQASRQWFQK 672
HGDLNEEVYM LP GY SN VC L+KSLYGLKQASRQWF K
Sbjct: 865 HGDLNEEVYMKLPPGYNRKGESLPSNAVCLLHKSLYGLKQASRQWFSK 912
>gb|KYP77128.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 732
Score = 247 bits (631), Expect = 2e-74
Identities = 121/224 (54%), Positives = 156/224 (69%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
RS R R PP++L+ Y+ LPPSIT S + + Y +S +LS + S +KA A I
Sbjct: 253 RSRRMRHPPRHLEEYEVDLPPSITRFQSDPPSGNSVVYPLSSYLSYDNFSHSYKALLATI 312
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S +EPK F+QA KH W++A EIEALEKN TWTL LP K+ + K V+KIKYK +
Sbjct: 313 SLHSEPKNFSQAVKHECWREATKKEIEALEKNETWTLEALPPGKNAVDSKWVFKIKYKPN 372
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
G +ERYKARLVA+G+TQ EG+D+ +TF+PV K+ T+R +L +A GW +HQLDVNNAFL
Sbjct: 373 GEIERYKARLVARGFTQVEGVDFHETFAPVAKLVTLRCLLTIATTNGWEVHQLDVNNAFL 432
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HG+L EEVYM +PQG+ VCKL KSLYG +QASR W+QK
Sbjct: 433 HGELEEEVYMCIPQGFAKEGETRVCKLRKSLYGRRQASRNWYQK 476
>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Gossypium raimondii]
Length = 683
Score = 246 bits (628), Expect = 3e-74
Identities = 129/224 (57%), Positives = 157/224 (70%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
R R R PP YLQ Y P+ T +P G + I +S + LS H FT I
Sbjct: 116 RPQRNRRPPSYLQDYQHYQLPAATNHP-------GTPHSIFNCISYHNLSPQHLHFTLAI 168
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S EPKT+ QA+K W +AM AEI ALE+NNTWT+T LP K GCK V+++K+++D
Sbjct: 169 SASIEPKTYKQASKFTHWNEAMQAEINALEQNNTWTMTTLPPGKTPXGCKWVFRVKHRAD 228
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
GS ERYKARLVAKGYTQ G+DYFDTFSPV KITTVRL+LA+A ++ W++ QLDVNNAFL
Sbjct: 229 GSTERYKARLVAKGYTQ-IGVDYFDTFSPVAKITTVRLLLALATSRHWHIQQLDVNNAFL 287
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HGDLNE+VYM P G+ +S VCKL+KS+YGLKQASRQWF K
Sbjct: 288 HGDLNEDVYMLPPPGFS-HDSTKVCKLHKSIYGLKQASRQWFSK 330
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 253 bits (645), Expect = 5e-74
Identities = 126/224 (56%), Positives = 158/224 (70%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
+STR + P YL+ Y C L + P ++Y ++ LS + LS+ + + I
Sbjct: 843 KSTRHKCSPAYLKDYHCNLLIGVPPPEDKH-----IRYPLNTVLSYDSLSASYSRYVLSI 897
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
+ EP TFNQA K+ W +AM AE++ALE N TWT+ LP K IG K VYKIKYKSD
Sbjct: 898 TTHVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSD 957
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
GS+ERYKARLV KGYTQ +GLDYFDTF+PV K++TVR++LA+A+ + W LHQLD+NNAFL
Sbjct: 958 GSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRMLLAIASCQHWELHQLDINNAFL 1017
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HGDL E+VYM +PQG + N VCKLNKSLYGLKQASRQWF K
Sbjct: 1018 HGDLLEDVYMEIPQGLNIDKPNHVCKLNKSLYGLKQASRQWFAK 1061
>gb|KYP38661.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 778
Score = 246 bits (629), Expect = 1e-73
Identities = 126/223 (56%), Positives = 151/223 (67%)
Frame = +1
Query: 4 STRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQIS 183
S R PP +L+ Y C SIT P ++ +LS + LS+ H+AF I
Sbjct: 285 SQHPRRPPHHLKDYVCNHIKSITNFP------------LANYLSLSNLSNSHQAFLTNII 332
Query: 184 KLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSDG 363
EPK+F+QA K EW++AM EI+ALE NNTW+L LP K IGCK VYKIKY+SDG
Sbjct: 333 DNQEPKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDG 392
Query: 364 SLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFLH 543
S+ERYKARLVAKGY Q EG+DY DTF+PV K+ VRL+L++AA K W LHQLDVNN FL
Sbjct: 393 SIERYKARLVAKGYAQIEGIDYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVNNDFLQ 452
Query: 544 GDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
GDLNEEVYM LP + VCKL+K +YGLKQASRQWF K
Sbjct: 453 GDLNEEVYMKLPPRFSRKGETYVCKLHKFIYGLKQASRQWFSK 495
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 251 bits (642), Expect = 1e-73
Identities = 129/224 (57%), Positives = 159/224 (70%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
RSTR R PP YLQ + + T + S +G+++ + FLS + LS + I
Sbjct: 743 RSTRPRRPPTYLQDFHGAFTSTSTAHSS-----TGIRHPLHSFLSYDLLSPSFHHYVFSI 797
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S +TEPK F +A+K W KAM EI ALE NNTW LT LP +K IGC+ VYK+K+K+D
Sbjct: 798 SSVTEPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKAD 857
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
GS++RYKARLVAKGYTQ EGLD+FDTFSPV K+TTVRL+L++AA W+L QLDVNNAFL
Sbjct: 858 GSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFL 917
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
HGDLNEEVYM LP G S VC+L +SLYGLKQASRQW+ +
Sbjct: 918 HGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWYAR 961
>ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max]
Length = 1150
Score = 250 bits (639), Expect = 2e-73
Identities = 131/225 (58%), Positives = 160/225 (71%), Gaps = 1/225 (0%)
Frame = +1
Query: 1 RSTRQRS-PPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQ 177
R+ R R+ P +Y +IT +P G ++ IS +S N+LSS + +F
Sbjct: 262 RTDRIRTRPTKYTDYQTSFTSATITNHP-------GTKHPISSVISYNKLSSSYHSFILN 314
Query: 178 ISKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKS 357
IS +EPK++N+A KH W +AM EI ALE+NNTW LT+LP +K+ IGCK VYKIK+ S
Sbjct: 315 ISANSEPKSYNEACKHDSWVQAMHDEISALERNNTWVLTDLPQHKNVIGCKWVYKIKHNS 374
Query: 358 DGSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAF 537
DGS+ERYKARLVAKGYTQ EGLDY DTFSPV KITTVRL+LA+AA WYL QLDVNNAF
Sbjct: 375 DGSIERYKARLVAKGYTQIEGLDYLDTFSPVAKITTVRLLLALAALNNWYLRQLDVNNAF 434
Query: 538 LHGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
LHG L+EEVYM LP G + VCKL +SLYGLKQASRQW+ +
Sbjct: 435 LHGGLHEEVYMVLPPGMKSAKPGQVCKLQRSLYGLKQASRQWYAR 479
>gb|KYP64431.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 812
Score = 246 bits (628), Expect = 2e-73
Identities = 128/219 (58%), Positives = 157/219 (71%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
RS R PP YL+ + +T +P G+ + +S ++ N LSS H + +
Sbjct: 460 RSQRIPFPPTYLKDFHYNF---LTSSPELS---KGISHPLSSVINYNTLSSSHLHYVLSL 513
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S EPK ++QA K EW AM AEI+AL NNTWT+ +LP KH IGCK VYKIKY+SD
Sbjct: 514 STHEEPKFYHQAVKSQEWVVAMKAEIDALTANNTWTIVDLPSGKHPIGCKWVYKIKYRSD 573
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
GS+ERYKARLVAKG+TQ EGLDYF+T +PV K+TTVRL+LAVA+++ W+LHQLDVNNAFL
Sbjct: 574 GSVERYKARLVAKGFTQTEGLDYFETCAPVEKLTTVRLLLAVASSQNWFLHQLDVNNAFL 633
Query: 541 HGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASR 657
HGDL EEVYMT+PQG S N VCKL+KSLY LKQASR
Sbjct: 634 HGDLEEEVYMTIPQGVVWSKPNQVCKLHKSLYMLKQASR 672
>ref|XP_008356319.1| PREDICTED: uncharacterized protein LOC103420023 [Malus domestica]
Length = 910
Score = 247 bits (631), Expect = 3e-73
Identities = 127/227 (55%), Positives = 158/227 (69%), Gaps = 3/227 (1%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITP---NPSAQAV*SGMQYCISQFLSANQLSSCHKAFT 171
RS R+ +PP Y C PS P + S+ +G +Y ++ FL+ ++ S ++F
Sbjct: 422 RSDRRSAPPTRFSDYVCPTLPSTQPIDSSSSSTGPTTGTRYPLANFLTYHRFSPQQQSFL 481
Query: 172 AQISKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKY 351
A I++ EP T+ QA H WQ AM +E+ ALE NTWTLT L +K IGC+ VYKIK+
Sbjct: 482 ASINQQVEPHTYAQAALHPHWQGAMDSELHALEATNTWTLTTLHASKTPIGCRWVYKIKH 541
Query: 352 KSDGSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNN 531
+SDGS+ERYKA LVAKGYTQ EG+DY DTFS K+ TVR +LA+AAA+ W LHQLDV+N
Sbjct: 542 RSDGSIERYKAXLVAKGYTQLEGVDYHDTFSXTAKMVTVRCLLALAAARDWSLHQLDVHN 601
Query: 532 AFLHGDLNEEVYMTLPQGYPVSNSNLVCKLNKSLYGLKQASRQWFQK 672
AFLHGDL+EE+YMTLP G NLVC LNKSLYGLKQASRQWF K
Sbjct: 602 AFLHGDLHEELYMTLPPGLRXQGENLVCXLNKSLYGLKQASRQWFAK 648
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 250 bits (638), Expect = 4e-73
Identities = 129/228 (56%), Positives = 158/228 (69%), Gaps = 4/228 (1%)
Frame = +1
Query: 1 RSTRQRSPPQYLQVYDCKLPPSITPNPSAQAV*SGMQYCISQFLSANQLSSCHKAFTAQI 180
R TR P YL+ Y C L S+ A + I FLS ++LS +K F+ +
Sbjct: 736 RPTRVSKQPSYLKDYHCSLINSV-----AHVETHSTSHPIQHFLSYDKLSPSYKLFSLSV 790
Query: 181 SKLTEPKTFNQANKHLEWQKAMTAEIEALEKNNTWTLTELPVNKHCIGCK*VYKIKYKSD 360
S ++EP +F +A + EW+ AM E+EALE+N T ++ LPV KH +GCK VYK K+K D
Sbjct: 791 SIISEPSSFAKAAEIPEWRAAMDCELEALEENKTXSIVSLPVGKHPVGCKWVYKXKHKXD 850
Query: 361 GSLERYKARLVAKGYTQEEGLDYFDTFSPVTKITTVRLILAVAAAKGWYLHQLDVNNAFL 540
G++ERYKARLVAKGYTQ EG+DY DTFSPV K+ TV+L+LA+AA KGW+L QLDVNNAFL
Sbjct: 851 GTIERYKARLVAKGYTQREGIDYVDTFSPVAKLVTVKLLLAIAAVKGWHLSQLDVNNAFL 910
Query: 541 HGDLNEEVYMTLPQGYPVSN----SNLVCKLNKSLYGLKQASRQWFQK 672
HGDLNEEVYM LP GY SN VC L+KSLYGLKQASRQWF K
Sbjct: 911 HGDLNEEVYMKLPPGYNRKGESLPSNXVCLLHKSLYGLKQASRQWFSK 958