BLASTX nr result
ID: Rehmannia27_contig00048093
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00048093
(404 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015889801.1| PREDICTED: uncharacterized mitochondrial pro... 84 4e-27
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643... 73 6e-26
ref|XP_015881842.1| PREDICTED: uncharacterized mitochondrial pro... 84 8e-26
ref|XP_012078092.1| PREDICTED: uncharacterized protein LOC105638... 75 1e-25
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 79 2e-25
ref|XP_015889218.1| PREDICTED: uncharacterized mitochondrial pro... 84 2e-25
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 78 6e-25
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 77 1e-24
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera] 75 1e-24
ref|XP_015872411.1| PREDICTED: uncharacterized mitochondrial pro... 81 1e-24
ref|XP_015380694.1| PREDICTED: uncharacterized mitochondrial pro... 77 2e-24
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 77 2e-24
ref|XP_015638542.1| PREDICTED: uncharacterized protein LOC107280... 77 2e-24
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 78 3e-24
ref|XP_015881362.1| PREDICTED: uncharacterized mitochondrial pro... 80 3e-24
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho... 76 4e-24
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc... 76 4e-24
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz... 76 4e-24
ref|XP_015167475.1| PREDICTED: uncharacterized mitochondrial pro... 71 4e-24
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 74 5e-24
>ref|XP_015889801.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Ziziphus jujuba]
Length = 426
Score = 83.6 bits (205), Expect(3) = 4e-27
Identities = 43/60 (71%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 TVGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGL-LFSSSQL 178
TVGALQYL +TRP+I + VNKLSQFLHAPTT HW ACKR+LRYLKGT G L +S+QL
Sbjct: 168 TVGALQYLTITRPEISFSVNKLSQFLHAPTTDHWEACKRLLRYLKGTIQYGFQLQASNQL 227
Score = 46.6 bits (109), Expect(3) = 4e-27
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +3
Query: 171 HNLVLEGFSDANWAGCLDDRKSTSGYCIFLEKS 269
+ LVL F+D++WA DDRKSTSGYCIFL S
Sbjct: 225 NQLVLHAFADSDWASNPDDRKSTSGYCIFLGAS 257
Score = 38.5 bits (88), Expect(3) = 4e-27
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 271 VSWSSKKQSVIVRSSTESEYR 333
+SWSSKKQ V+ RSSTE+EYR
Sbjct: 259 ISWSSKKQHVVARSSTEAEYR 279
>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
Length = 1003
Score = 72.8 bits (177), Expect(3) = 6e-26
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFS 166
VG LQY+ +TRPD+ + VNKL+QF+H PT HW A KR+LRYL GT GL S
Sbjct: 786 VGTLQYVTLTRPDVSFAVNKLAQFMHHPTAAHWIAAKRLLRYLHGTASMGLFLS 839
Score = 50.1 bits (118), Expect(3) = 6e-26
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3
Query: 144 SLRVFFSLVHNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
S+ +F S+ + L+ FSD++WAGC DDRKSTSGY I+L
Sbjct: 833 SMGLFLSIDSPISLQCFSDSDWAGCPDDRKSTSGYAIYL 871
Score = 41.6 bits (96), Expect(3) = 6e-26
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1
Query: 265 NRVSWSSKKQSVIVRSSTESEYR 333
N +SWSSKKQS + RSSTESEYR
Sbjct: 874 NLISWSSKKQSTVARSSTESEYR 896
>ref|XP_015881842.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Ziziphus jujuba] gi|1009147087|ref|XP_015891223.1|
PREDICTED: uncharacterized mitochondrial protein
AtMg00810-like [Ziziphus jujuba]
Length = 258
Score = 84.3 bits (207), Expect(3) = 8e-26
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2
Query: 2 TVGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
T+G LQYL +TRP+I YIVNKLSQ++H PT HW ACK++LRYL+GTK GLL S
Sbjct: 34 TIGMLQYLTITRPEISYIVNKLSQYMHKPTDAHWTACKKILRYLQGTKHFGLLLRPS 90
Score = 42.7 bits (99), Expect(3) = 8e-26
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +3
Query: 171 HNLVLEGFSDANWAGCLDDRKSTSGYCIFLEKS 269
++L + GF+DA+WA + D+KST GYCI+L S
Sbjct: 91 NHLTISGFTDADWASNIYDKKSTGGYCIYLGDS 123
Score = 37.0 bits (84), Expect(3) = 8e-26
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 271 VSWSSKKQSVIVRSSTESEYR 333
V WSSKKQ+V+ RSSTES+YR
Sbjct: 125 VYWSSKKQNVVARSSTESKYR 145
>ref|XP_012078092.1| PREDICTED: uncharacterized protein LOC105638831 [Jatropha curcas]
Length = 326
Score = 75.5 bits (184), Expect(3) = 1e-25
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSS 169
+G+LQY+ +TRPD+ + +NKL+QF+H PT HW A KR+LRYL GT GL FS+
Sbjct: 217 IGSLQYITLTRPDVSFAINKLAQFMHQPTQVHWTAAKRLLRYLHGTASMGLFFSN 271
Score = 51.2 bits (121), Expect(3) = 1e-25
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +3
Query: 144 SLRVFFSLVHNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
S+ +FFS + + L+ FS+++WAGC DDRKSTSGY I+L
Sbjct: 264 SMGLFFSNISQISLQCFSNSDWAGCPDDRKSTSGYSIYL 302
Score = 36.6 bits (83), Expect(3) = 1e-25
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1
Query: 265 NRVSWSSKKQSVIVRSSTESEY 330
N +SWSSKKQS + SSTESEY
Sbjct: 305 NLISWSSKKQSTVACSSTESEY 326
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 79.3 bits (194), Expect(3) = 2e-25
Identities = 37/55 (67%), Positives = 41/55 (74%)
Frame = +2
Query: 2 TVGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFS 166
T+GALQYL TRPDI + VNKLSQ+L PT HW ACKRVLRYLKG GL F+
Sbjct: 783 TIGALQYLTYTRPDIAFAVNKLSQYLQQPTELHWTACKRVLRYLKGIVHRGLHFT 837
Score = 44.3 bits (103), Expect(3) = 2e-25
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +3
Query: 159 FSLVHNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
F+ +L L+ ++DA+WA +DDR+ST+GYC+FL
Sbjct: 836 FTPASSLHLQVYTDADWASSIDDRRSTTGYCVFL 869
Score = 38.9 bits (89), Expect(3) = 2e-25
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYRXXXXXXXXXXXXXXXFGELSLSL 402
F N +WSS+KQ V+ RSST++EYR F EL +SL
Sbjct: 868 FLGTNLFTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISL 917
>ref|XP_015889218.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Ziziphus jujuba]
Length = 249
Score = 84.0 bits (206), Expect(3) = 2e-25
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +2
Query: 2 TVGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
T+GALQYL +TRPDI + VNKLSQF+ APT+ HW ACKR+LRYLKGT GL S+
Sbjct: 34 TIGALQYLTLTRPDISFTVNKLSQFVQAPTSLHWDACKRLLRYLKGTATHGLFIKST 90
Score = 39.7 bits (91), Expect(3) = 2e-25
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 153 VFFSLVHNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
+F L + GFSD++WA DR+STSGY IFL
Sbjct: 85 LFIKSTMKLAVHGFSDSDWASDRTDRRSTSGYGIFL 120
Score = 38.9 bits (89), Expect(3) = 2e-25
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N +SW SKKQ V+ RSSTE+EYR
Sbjct: 119 FLGPNLISWRSKKQQVVARSSTEAEYR 145
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 77.8 bits (190), Expect(3) = 6e-25
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQY+ +TRPDI + VNK QF+ PTT HW + KR+LRYL+GT +GLLFS S
Sbjct: 1180 VGALQYVTLTRPDIAFAVNKACQFMQQPTTAHWLSVKRILRYLRGTMQDGLLFSPS 1235
Score = 46.2 bits (108), Expect(3) = 6e-25
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 153 VFFSLVHNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
+ FS NL +EGF+DA+W LDDR+S+SGY ++L
Sbjct: 1230 LLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYLVYL 1265
Score = 37.0 bits (84), Expect(3) = 6e-25
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1
Query: 265 NRVSWSSKKQSVIVRSSTESEYR 333
N VSWSS KQ V+ RSS ESEYR
Sbjct: 1268 NLVSWSSTKQKVVSRSSAESEYR 1290
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 77.0 bits (188), Expect(3) = 1e-24
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQYL +TRPD+ + VNK+ Q+LHAPTT HWAA KR+LRYLK T GL S S
Sbjct: 1078 VGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKS 1133
Score = 47.4 bits (111), Expect(3) = 1e-24
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = +3
Query: 171 HNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
++L++ FSDA+WAGCLDDR+ST G+ +F+
Sbjct: 1134 NSLLVSAFSDADWAGCLDDRRSTGGFAVFI 1163
Score = 35.8 bits (81), Expect(3) = 1e-24
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N VSWS++KQ+ + RSSTE+EY+
Sbjct: 1162 FIGPNLVSWSARKQATVSRSSTEAEYK 1188
>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
Length = 431
Score = 75.5 bits (184), Expect(3) = 1e-24
Identities = 37/56 (66%), Positives = 41/56 (73%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQY +TRPDI Y VNKL QF+HAPT+ H KRVLRYLKG+ F GL F S
Sbjct: 106 VGALQYCTITRPDIAYTVNKLCQFMHAPTSTHLQVVKRVLRYLKGSLFYGLSFQPS 161
Score = 44.3 bits (103), Expect(3) = 1e-24
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 174 NLVLEGFSDANWAGCLDDRKSTSGYCIF 257
+L L ++DA+WA C DDR+STSGYCIF
Sbjct: 163 SLDLIAYTDADWASCPDDRRSTSGYCIF 190
Score = 40.4 bits (93), Expect(3) = 1e-24
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
FF N VSWS+ KQ V+ RSSTESEYR
Sbjct: 190 FFGGNLVSWSASKQKVVSRSSTESEYR 216
>ref|XP_015872411.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
partial [Ziziphus jujuba]
Length = 374
Score = 80.9 bits (198), Expect(3) = 1e-24
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = +2
Query: 2 TVGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSSQ 175
T+GALQYL +T+P+I +IVNKL+QF+H PT HW+ACKR+L YL GTK GLL S+
Sbjct: 251 TIGALQYLTITKPEISFIVNKLNQFIHNPTDVHWSACKRILCYLHGTKHLGLLIRPSR 308
Score = 42.0 bits (97), Expect(3) = 1e-24
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 177 LVLEGFSDANWAGCLDDRKSTSGYCIFL 260
L L F++A+WA LDDRKSTS YCI+L
Sbjct: 310 LSLSSFTNADWASNLDDRKSTSSYCIYL 337
Score = 37.4 bits (85), Expect(3) = 1e-24
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 271 VSWSSKKQSVIVRSSTESEYR 333
VSWSS+KQ+V+ RS+TE+EYR
Sbjct: 342 VSWSSRKQNVVARSNTEAEYR 362
>ref|XP_015380694.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Citrus sinensis]
Length = 166
Score = 77.4 bits (189), Expect(3) = 2e-24
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VG+LQY+L+TRPDI Y VNKLSQFL PT HW ACKRVLRYL+ T G+ F +S
Sbjct: 35 VGSLQYVLLTRPDIAYPVNKLSQFLAHPTISHWQACKRVLRYLQSTSHFGIQFFNS 90
Score = 42.7 bits (99), Expect(3) = 2e-24
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 183 LEGFSDANWAGCLDDRKSTSGYCIFL 260
L FSDA+WA DDRKST GYC+FL
Sbjct: 95 LTAFSDADWAADPDDRKSTGGYCVFL 120
Score = 39.3 bits (90), Expect(3) = 2e-24
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N +SWSSKKQ+++ RSS ESEYR
Sbjct: 119 FLGSNIISWSSKKQTIVSRSSAESEYR 145
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 77.0 bits (188), Expect(3) = 2e-24
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQYL +TRPD+ + VNK+ Q+LHAPTT HWAA KR+LRYLK T GL S S
Sbjct: 1216 VGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKS 1271
Score = 46.2 bits (108), Expect(3) = 2e-24
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 171 HNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
++L++ FSDA+WAGCLDDR ST G+ +F+
Sbjct: 1272 NSLLVSAFSDADWAGCLDDRHSTGGFAVFI 1301
Score = 35.8 bits (81), Expect(3) = 2e-24
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N VSWS++KQ+ + RSSTE+EY+
Sbjct: 1300 FIGPNLVSWSARKQATVSRSSTEAEYK 1326
>ref|XP_015638542.1| PREDICTED: uncharacterized protein LOC107280922 [Oryza sativa
Japonica Group]
Length = 897
Score = 77.0 bits (188), Expect(3) = 2e-24
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQYL +TRPD+ + VNK+ Q+LHAPTT HWAA KR+LRYLK T GL S S
Sbjct: 682 VGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKS 737
Score = 46.2 bits (108), Expect(3) = 2e-24
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 171 HNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
++L++ FSDA+WAGCLDDR ST G+ +F+
Sbjct: 738 NSLLVSAFSDADWAGCLDDRHSTGGFAVFI 767
Score = 35.8 bits (81), Expect(3) = 2e-24
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N VSWS++KQ+ + RSSTE+EY+
Sbjct: 766 FIGPNLVSWSARKQATVSRSSTEAEYK 792
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 77.8 bits (190), Expect(3) = 3e-24
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQYL +TR D+ ++VNK+ QFLH+PTT HW+A KR+LRY+KGT GL F S
Sbjct: 720 VGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKS 775
Score = 45.4 bits (106), Expect(3) = 3e-24
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 159 FSLVHNLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
F ++++ FSDA+WAGC DDR+ST G+ +FL
Sbjct: 772 FGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFL 805
Score = 35.4 bits (80), Expect(3) = 3e-24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N +SWS++KQ+ + RSSTE+EY+
Sbjct: 804 FLGPNLISWSARKQATVSRSSTEAEYK 830
>ref|XP_015881362.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Ziziphus jujuba]
Length = 327
Score = 80.5 bits (197), Expect(3) = 3e-24
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 2 TVGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
T+G LQYLL+TRPD+ +I+NKLSQF+ APT HWAACK VL YLKGT GL SS
Sbjct: 118 TIGTLQYLLLTRPDLAFIINKLSQFMQAPTEVHWAACKCVLHYLKGTIQLGLHIRSS 174
Score = 40.0 bits (92), Expect(3) = 3e-24
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 183 LEGFSDANWAGCLDDRKSTSGYCIFL 260
L G++DANWA +DDR+ST G C++L
Sbjct: 179 LYGYTDANWASNVDDRRSTGGCCVYL 204
Score = 38.1 bits (87), Expect(3) = 3e-24
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 265 NRVSWSSKKQSVIVRSSTESEYR 333
N VSWSS+KQ V+ RSS ESEYR
Sbjct: 207 NLVSWSSRKQHVVARSSMESEYR 229
>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
Length = 1150
Score = 76.3 bits (186), Expect(3) = 4e-24
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSSQ 175
VGALQYL +TRPDI + +NK+ QFLH+PT HW+A KR++RYL+GT GL SQ
Sbjct: 850 VGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQ 906
Score = 47.4 bits (111), Expect(3) = 4e-24
Identities = 17/29 (58%), Positives = 26/29 (89%)
Frame = +3
Query: 174 NLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
++++ FSDA+WAGC+DDR+STSG+ +FL
Sbjct: 907 SMLVNAFSDADWAGCVDDRRSTSGFAVFL 935
Score = 34.7 bits (78), Expect(3) = 4e-24
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N +SWS +KQ+ + RSSTE+EY+
Sbjct: 934 FLGSNLISWSVRKQATVSRSSTEAEYK 960
>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 76.3 bits (186), Expect(3) = 4e-24
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSSQ 175
VGALQYL +TRPDI + +NK+ QFLH+PT HW+A KR++RYL+GT GL SQ
Sbjct: 812 VGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQ 868
Score = 47.4 bits (111), Expect(3) = 4e-24
Identities = 17/29 (58%), Positives = 26/29 (89%)
Frame = +3
Query: 174 NLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
++++ FSDA+WAGC+DDR+STSG+ +FL
Sbjct: 869 SMLVNAFSDADWAGCVDDRRSTSGFAVFL 897
Score = 34.7 bits (78), Expect(3) = 4e-24
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N +SWS +KQ+ + RSSTE+EY+
Sbjct: 896 FLGSNLISWSVRKQATVSRSSTEAEYK 922
>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1139
Score = 76.3 bits (186), Expect(3) = 4e-24
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSSQ 175
VGALQYL +TRPDI + +NK+ QFLH+PT HW+A KR++RYL+GT GL SQ
Sbjct: 818 VGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQ 874
Score = 47.4 bits (111), Expect(3) = 4e-24
Identities = 17/29 (58%), Positives = 26/29 (89%)
Frame = +3
Query: 174 NLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
++++ FSDA+WAGC+DDR+STSG+ +FL
Sbjct: 875 SMLVNAFSDADWAGCVDDRRSTSGFAVFL 903
Score = 34.7 bits (78), Expect(3) = 4e-24
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N +SWS +KQ+ + RSSTE+EY+
Sbjct: 902 FLGSNLISWSVRKQATVSRSSTEAEYK 928
>ref|XP_015167475.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Solanum tuberosum]
Length = 212
Score = 70.9 bits (172), Expect(3) = 4e-24
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQY+ +TRPD+ Y VN L QF+H+PT H+ A KRVLRYLKGT GL S
Sbjct: 25 VGALQYINITRPDVSYSVNNLCQFMHSPTVAHFHALKRVLRYLKGTMHLGLQLRQS 80
Score = 49.3 bits (116), Expect(3) = 4e-24
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 177 LVLEGFSDANWAGCLDDRKSTSGYCIFL 260
LV+ GFSDA+WAG DDR+ST GYCIFL
Sbjct: 83 LVVNGFSDADWAGSPDDRRSTHGYCIFL 110
Score = 38.1 bits (87), Expect(3) = 4e-24
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1
Query: 253 FFLKNRVSWSSKKQSVIVRSSTESEYR 333
F N VSW SKKQ V+ +SSTESEYR
Sbjct: 109 FLGSNLVSWCSKKQRVVSQSSTESEYR 135
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 74.3 bits (181), Expect(3) = 5e-24
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +2
Query: 5 VGALQYLLMTRPDIFYIVNKLSQFLHAPTTCHWAACKRVLRYLKGTKFEGLLFSSS 172
VGALQYL +TRPDI + VNK+ Q+LH+PTT HWAA KR+LRYL+ T GL S
Sbjct: 1118 VGALQYLTLTRPDISFSVNKVCQYLHSPTTVHWAAVKRILRYLQQTSGLGLKIRKS 1173
Score = 48.9 bits (115), Expect(3) = 5e-24
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 174 NLVLEGFSDANWAGCLDDRKSTSGYCIFL 260
+L++ GFSDA+WAGCLDDR+ST G+ ++L
Sbjct: 1175 SLLVSGFSDADWAGCLDDRRSTGGFAVYL 1203
Score = 34.7 bits (78), Expect(3) = 5e-24
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 265 NRVSWSSKKQSVIVRSSTESEYR 333
N VSWS++KQ + RSSTE+EY+
Sbjct: 1206 NLVSWSARKQPTVSRSSTEAEYK 1228