BLASTX nr result
ID: Rehmannia27_contig00046859
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia27_contig00046859 (1167 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178... 184 6e-48 gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 167 7e-42 emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 129 7e-42 gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 158 6e-39 gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo... 155 3e-38 emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 155 5e-38 gb|KYP63467.1| Retrovirus-related Pol polyprotein from transposo... 149 1e-37 gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 153 2e-37 gb|KYP40244.1| Retrovirus-related Pol polyprotein from transposo... 152 4e-37 gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 153 4e-37 gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 153 4e-37 emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 150 2e-36 gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 150 3e-36 gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 149 6e-36 ref|XP_012066815.1| PREDICTED: uncharacterized protein LOC105629... 149 6e-36 ref|XP_008383301.1| PREDICTED: uncharacterized protein LOC103446... 149 7e-36 gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 149 8e-36 gb|KYP42778.1| Retrovirus-related Pol polyprotein from transposo... 147 1e-35 gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 149 1e-35 emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 148 2e-35 >ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis] Length = 877 Score = 184 bits (466), Expect = 6e-48 Identities = 89/210 (42%), Positives = 119/210 (56%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FC AC+LGK H FPS++ T P +L+H+D+WGP TS G+ YY+ +DDYTR+TW Sbjct: 491 FCDACQLGKCHMQHFPSIETSITQPLELLHADLWGPAPITSSQGYSYYLSILDDYTRYTW 550 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 ++PL T+ L F F+ + + C+ G S+ F PCP+ Sbjct: 551 IFPLTTKSKTLSAFIDFKNMIENCLNLRIKCLQTDWGGEFRPFVSYLSEQGIQFRHPCPY 610 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 H QN K +RK LP+KFWW+ TA Y INRLPTP LNN S F+ Sbjct: 611 IHHQNRKIERKHRHIVETGLTLLAQAHLPLKFWWNAFHTATYLINRLPTPILNNKSPFEK 670 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L+++ PDY +K FGC+C+PYLRPYN KL Sbjct: 671 LFHKLPDYTMMKVFGCSCYPYLRPYNHHKL 700 Score = 91.3 bits (225), Expect = 2e-16 Identities = 81/312 (25%), Positives = 127/312 (40%), Gaps = 59/312 (18%) Frame = -1 Query: 1140 SSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKEG 961 S++P++ H+L VP ITKNL+S+S+ DNNV +EF++ C VKDK + LLKG + G Sbjct: 315 STKPIYLNHVLHVPSITKNLISVSKLLADNNVFIEFYNHVCFVKDKNSRITLLKGIARGG 374 Query: 960 LYQL----------------------------YLTLLPGSVST----------------H 913 LYQ+ L+++P S+ T + Sbjct: 375 LYQVPSLNAICDNSSSVVPVFNSSESVFNPINPLSVVPVSMFTQLNSLDTETCPLMLVNN 434 Query: 912 PQSSPGA----FPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLFLPINFLFVQLASL 745 PQ + A F + +L H R+GHP L+ + K L F+ Q Sbjct: 435 PQINKNASVAHFASCNKTVDYNLLHKRMGHPITHALKQIMKCLDSTFVLSKDSKPQFCDA 494 Query: 744 VKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W----MVLNTMYILWMITLDT-- 592 + C ++ PL +L W + + Y ++ LD Sbjct: 495 CQLGKCHMQHFPSIETSITQ--------PLELLHADLWGPAPITSSQGYSYYLSILDDYT 546 Query: 591 --LGCIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLAPILSSLGTIFRH 418 L K + ++F+ F ++E +I LQ+D GGE+R LS G FRH Sbjct: 547 RYTWIFPLTTKSKTLSAFIDFKNMIENCLNLRIKCLQTDWGGEFRPFVSYLSEQGIQFRH 606 Query: 417 PVPTLISKMAKL 382 P P + + K+ Sbjct: 607 PCPYIHHQNRKI 618 >gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1165 Score = 167 bits (422), Expect = 7e-42 Identities = 88/216 (40%), Positives = 121/216 (56%), Gaps = 4/216 (1%) Frame = -3 Query: 772 FPFCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRH 593 F FC AC+ GK H++ F + P L+HSDVWGP +SV GFKYYV F+DD++R Sbjct: 396 FEFCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRF 455 Query: 592 TWLYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*L----GW*V*KSSSHFILSWHHF 425 TW+YPLK + Q F F+ ++NQ + K L G S I + Sbjct: 456 TWIYPLKQKSDVFQAFIQFR----NLVENQFNKRIKTLQCDGGGEFKSLSKVLIKTGIQL 511 Query: 424 *TPCPHTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNN 245 CP+T QNG+A+RK +P+ +WW+ +TAV+ INRLPT + N Sbjct: 512 RESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKN 571 Query: 244 LSLFQCLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 S +Q L+++ PDY +KTFGCAC+P L+PYN KL Sbjct: 572 KSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKL 607 Score = 121 bits (304), Expect = 2e-26 Identities = 95/263 (36%), Positives = 124/263 (47%), Gaps = 13/263 (4%) Frame = -1 Query: 1158 GGPSISSSQP-LHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLL 982 G S+ + Q L+ K IL VP ITKNLLSIS+ T DN++ VEFHD C VKDK T ++LL Sbjct: 276 GDSSLDTQQKSLNLKDILYVPKITKNLLSISKLTFDNDIYVEFHDVACFVKDKLTGRILL 335 Query: 981 KGALKEGLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFK 802 +G +K+GLYQ LPG ST P F ++K WH +LGHP VL V K Sbjct: 336 EGKIKDGLYQ-----LPGG-STSTNKRPHVFFSIKET-----WHRKLGHPNSKVLNEVMK 384 Query: 801 TLVFLFLPI-NFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQWMVLN- 628 P NF F C C S + PL ++ V Sbjct: 385 LCNIEASPCENFEF--------CEACQFGKAHNLPFQNS---VSCAKEPLDLVHSDVWGP 433 Query: 627 ---------TMYILWMITLDTLGCIH-LKLKYEVCNSFLHFNALVERQFKTKILALQSD* 478 Y+L++ I+ LK K +V +F+ F LVE QF +I LQ D Sbjct: 434 APISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQCDG 493 Query: 477 GGEYRSLAPILSSLGTIFRHPVP 409 GGE++SL+ +L G R P Sbjct: 494 GGEFKSLSKVLIKTGIQLRESCP 516 >emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] Length = 1131 Score = 129 bits (325), Expect(2) = 7e-42 Identities = 67/208 (32%), Positives = 104/208 (50%) Frame = -3 Query: 763 CSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTWL 584 C C++ K H + F + + + PF L+HSD+WGP +G +Y+V FVDD+TR +WL Sbjct: 467 CEPCQMAKSHRLPFTLSESRASQPFALVHSDLWGPAPVVGTNGARYFVLFVDDHTRFSWL 526 Query: 583 YPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPHT 404 Y L + + F F+ + + G ++ CP T Sbjct: 527 YLLAFKDQAISGFLQFKVMIETQFDTKVRMLQTNWGGEFQAFTNTLCKFGILHRVSCPST 586 Query: 403 HQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQCL 224 QQNG+ +RK +P+K+W +A+Y INRLP+ LN S ++ L Sbjct: 587 SQQNGRVERKHRHVVEVGLSLLAHASIPLKYWPFAFQSALYLINRLPSSVLNFSSPYKTL 646 Query: 223 YNQPPDYGFLKTFGCACFPYLRPYNTTK 140 Y+ P+Y FL+ +GC C+P+LRP+N K Sbjct: 647 YHCLPNYSFLRVYGCTCYPFLRPFNRHK 674 Score = 70.5 bits (171), Expect(2) = 7e-42 Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 13/122 (10%) Frame = -1 Query: 1158 GGPSISS-SQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLL 982 G +ISS S+ L+ K+IL VP +T NL+S++R DNNV VEF +VKD+A+ + LL Sbjct: 343 GHSTISSVSRSLNLKNILHVPQLTTNLISVNRLCTDNNVTVEFFTNGFVVKDQASKKALL 402 Query: 981 KGALKEGLYQLYLTLLPGSVSTHPQSSPGA--------FPAVKSADSLS----LWHNRLG 838 +G L GLY+L + P P + A P + S LS LWH RLG Sbjct: 403 QGNLNYGLYKL-SSSTPSRRYQDPDDNKLAGRTSLTTEVPCMSSTLQLSNKADLWHFRLG 461 Query: 837 HP 832 HP Sbjct: 462 HP 463 >gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1447 Score = 158 bits (400), Expect = 6e-39 Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 2/211 (0%) Frame = -3 Query: 763 CSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTWL 584 C AC+ GK H + + ++ P +LI+SDVWGP TSV G +YYV F+ DY++ TWL Sbjct: 491 CDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPAL-TSVGGKQYYVSFIGDYSKFTWL 549 Query: 583 YPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHF--ILSWHHF*TPCP 410 Y +K + +Q F FQ + + + G K S F I HH CP Sbjct: 550 YLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGITHH--VSCP 607 Query: 409 HTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQ 230 HTHQQNG A+RK +P+KFW + AVY INR PT L L+ + Sbjct: 608 HTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLE 667 Query: 229 CLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L+NQ PDY L+ FGCAC+P+LRPYNT KL Sbjct: 668 HLFNQTPDYSSLRVFGCACWPHLRPYNTHKL 698 Score = 88.2 bits (217), Expect = 3e-15 Identities = 75/245 (30%), Positives = 110/245 (44%), Gaps = 10/245 (4%) Frame = -1 Query: 1137 SQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKEGL 958 ++ +H ++IL VP+ KNL+S +R DN+ +E + + +KD AT ++L +G + L Sbjct: 370 NRDIHLRNILYVPNANKNLVSANRLVSDNSAYMELYSKYFNLKDLATKKLLFRGPCRGRL 429 Query: 957 YQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLFLP 778 Y L S P+ AF A+K S WH+RLGHP +++ V LP Sbjct: 430 Y----ALPSSSPHERPRPLKEAFGAIK--PSFERWHSRLGHPASPIVEKVISK---NNLP 480 Query: 777 INFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---WMVLNT------ 625 LA K VC + M PL ++ W T Sbjct: 481 C------LAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPALTSVGGKQ 534 Query: 624 MYILWMITLDTLGCIHL-KLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLAPI 448 Y+ ++ ++L K K EV F F ALVER F KI+A+QSD GGEY L Sbjct: 535 YYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSF 594 Query: 447 LSSLG 433 + +G Sbjct: 595 FTKIG 599 >gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 785 Score = 155 bits (393), Expect = 3e-38 Identities = 84/210 (40%), Positives = 113/210 (53%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FC+ C LGK H + S + TPF+LI+SD+WGP TS +G++YYV FVD +TR TW Sbjct: 436 FCTPCCLGKSHKLPSNSSKTVYHTPFELIYSDLWGPAPITSDNGYQYYVTFVDAHTRFTW 495 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 ++ LK + L F F Q I G +S+ + CPH Sbjct: 496 IFLLKRKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPH 555 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 TH QNG +RK LP++FW T+VY INRLP+ ++ N F+ Sbjct: 556 THHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRK 615 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L++Q PDY FL+ FGC+CFP+LRPYN KL Sbjct: 616 LFHQLPDYNFLRIFGCSCFPHLRPYNKNKL 645 Score = 103 bits (257), Expect = 2e-20 Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 16/261 (6%) Frame = -1 Query: 1167 PLPGGPSISSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQV 988 P P P IS L ++L VP+ITKNL+S+S+F KDN+V EFH T CLVK + T Sbjct: 307 PSPLKPHIS----LTLNNLLYVPNITKNLISVSQFCKDNSVFFEFHSTCCLVKSQDTKDT 362 Query: 987 LLKGAL-KEGLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSL----WHNRLGHPCFS 823 LL G + +GLYQ L P+ P P+ +A S+ WH+RLGHP Sbjct: 363 LLMGVVGPDGLYQFPSLL-------QPRQQPAITPSANTASCHSVPYVTWHSRLGHPHND 415 Query: 822 VLQNVFKTLVFLFLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ 643 V+++VF+ NF + + C C SN +Y P ++ Sbjct: 416 VIKSVFRL-------CNFPIINKTASDFCTPC---CLGKSHKLPSNSSKTVYHTPFELIY 465 Query: 642 ---W----MVLNTMYILWMITLDT----LGCIHLKLKYEVCNSFLHFNALVERQFKTKIL 496 W + + Y ++ +D LK K + F F+A+++ QF+ I Sbjct: 466 SDLWGPAPITSDNGYQYYVTFVDAHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQFQLPIK 525 Query: 495 ALQSD*GGEYRSLAPILSSLG 433 A+Q+D GGE+RS L+ G Sbjct: 526 AIQTDWGGEFRSFTSYLAQNG 546 >emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] Length = 1424 Score = 155 bits (393), Expect = 5e-38 Identities = 80/209 (38%), Positives = 110/209 (52%) Frame = -3 Query: 763 CSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTWL 584 CS C +GK+H SF T P +LIH+D+WGP S S G +YY+HF+D Y+R TW+ Sbjct: 539 CSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWI 598 Query: 583 YPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPHT 404 Y LK + Q F F+ + ++ + G + + + CP+T Sbjct: 599 YMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYT 658 Query: 403 HQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQCL 224 H+QNG A+RK LP K+W + T+VY INRLPTP L N S + L Sbjct: 659 HEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVL 718 Query: 223 YNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 ++Q P Y LK FGC C+P LRP+N KL Sbjct: 719 FHQKPSYSXLKVFGCMCYPNLRPFNHHKL 747 Score = 117 bits (293), Expect = 6e-25 Identities = 99/265 (37%), Positives = 122/265 (46%), Gaps = 18/265 (6%) Frame = -1 Query: 1149 SISSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGAL 970 S S+ L K +L VP+ITKNLLS+S+F DN+V EFH T C VKD +T VL+ G L Sbjct: 403 SFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFFEFHPTSCFVKDPSTRTVLMHGQL 462 Query: 969 KEGLY-----QLYLTLLPGS--VSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQN 811 K GLY QL L L S ST S PA +LWHNRLGHP ++ Sbjct: 463 KGGLYVFDNTQLKLPLHNSSCFASTALPSKEPTVPA-SPTSPFTLWHNRLGHPSSHIVSL 521 Query: 810 VFKTLVFLFLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W 640 V L ++ SL+ C C S Y PL ++ W Sbjct: 522 VLNKCNLPHLN------KIPSLI-CSXCCMGKIHKSSFLHST---SSYTKPLELIHTDLW 571 Query: 639 MVLNT-------MYILWMITLDTLGCIH-LKLKYEVCNSFLHFNALVERQFKTKILALQS 484 +T YI ++ I+ LK K E FLHF + VE Q KI A+QS Sbjct: 572 GPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQS 631 Query: 483 D*GGEYRSLAPILSSLGTIFRHPVP 409 D GGEYRS L+S G I R P Sbjct: 632 DWGGEYRSFTQYLTSNGIIHRISCP 656 >gb|KYP63467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 411 Score = 149 bits (377), Expect = 1e-37 Identities = 81/210 (38%), Positives = 110/210 (52%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FC+ C LGK H + + TPF+L +SD+WGP S +G++YYV FVD +TR TW Sbjct: 165 FCTPCCLGKSHKLLSTLSKTVYNTPFELTYSDLWGPAPFISDNGYQYYVTFVDAHTRFTW 224 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 ++ LK++ L F F Q I G +S+ + CPH Sbjct: 225 IFLLKSKAHTLDVFKQFHAMIQNQFQLPIKVIQTDWGGEFRSFTSYLAQTGIQHCLICPH 284 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 TH QNG +RK LP+ FW T+VY INRLP+ ++ N F+ Sbjct: 285 THHQNGVVERKHRRIVELGLTMLAQAQLPMHFWDHAFLTSVYLINRLPSSSIQNDVPFRK 344 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L++Q PDY FL+ FGC+CFP+LRPYN KL Sbjct: 345 LFHQLPDYNFLRIFGCSCFPHLRPYNKNKL 374 Score = 99.0 bits (245), Expect = 2e-19 Identities = 75/240 (31%), Positives = 112/240 (46%), Gaps = 12/240 (5%) Frame = -1 Query: 1116 HILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGAL-KEGLYQLYLT 940 ++L VP+ITKNL+S+S+F KDN+V EFH CLVK + T + LL G + +GLYQ Sbjct: 49 NLLYVPNITKNLISVSQFCKDNSVFFEFHSNFCLVKSQDTKKALLMGVVGPDGLYQFPSL 108 Query: 939 LLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLFLPINFLFV 760 P H +P A A ++ S + WH+RL HP VL++VF+ NF + Sbjct: 109 RQP---RQHTTITPSAHTASCNSVSYATWHSRLEHPHNDVLKSVFRL-------CNFPTI 158 Query: 759 QLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W----MVLNTMYILWMIT 601 C C LS +Y P + W + + Y ++ Sbjct: 159 NKTVCDFCTPCCLGKSHKLLSTLSK---TVYNTPFELTYSDLWGPAPFISDNGYQYYVTF 215 Query: 600 LDT----LGCIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLAPILSSLG 433 +D LK K + F F+A+++ QF+ I +Q+D GGE+RS L+ G Sbjct: 216 VDAHTRFTWIFLLKSKAHTLDVFKQFHAMIQNQFQLPIKVIQTDWGGEFRSFTSYLAQTG 275 >gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 839 Score = 153 bits (387), Expect = 2e-37 Identities = 86/212 (40%), Positives = 114/212 (53%), Gaps = 2/212 (0%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTT--TPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRH 593 FC++C LGK H + PS KT TPF+LI+SD+WGP S +G++YYV FVD +TR Sbjct: 183 FCTSCCLGKSHKL--PSQLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTFVDAHTRF 240 Query: 592 TWLYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPC 413 TW++ LK++ L F F Q I G +S+ H C Sbjct: 241 TWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQHGIHHRIIC 300 Query: 412 PHTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLF 233 PHTH QNG +RK LP+ FW T+VY INRLP+ ++ F Sbjct: 301 PHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPF 360 Query: 232 QCLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 + L++ PDY FL+ FGC+CFP+LRPYN TKL Sbjct: 361 RKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKL 392 Score = 108 bits (269), Expect = 6e-22 Identities = 88/255 (34%), Positives = 121/255 (47%), Gaps = 12/255 (4%) Frame = -1 Query: 1161 PGGPSISSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLL 982 P P IS + LH+ +L VP ITKNL+S+S+F KDN+V EFH T CLVK +A + LL Sbjct: 61 PLNPHISLT--LHN--LLYVPTITKNLISVSQFCKDNSVFFEFHSTFCLVKSQANSETLL 116 Query: 981 KGAL-KEGLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVF 805 G L +GLYQ L P S H SS S + WH+RLGHP VL++VF Sbjct: 117 HGVLGPDGLYQFPSLLPPRQPSAHTVSSQSV--------SYATWHSRLGHPHNDVLKSVF 168 Query: 804 KTLVFLFLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W-- 640 K NF + + C C LS +Y P ++ W Sbjct: 169 KL-------CNFPNINKSVSDFCTSCCLGKSHKLPSQLSK---TVYHTPFELIYSDLWGP 218 Query: 639 --MVLNTMYILWMITLDT----LGCIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD* 478 ++ + Y ++ +D LK K + F F+A+V QF+ I A+Q+D Sbjct: 219 APVLSDNGYQYYVTFVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDW 278 Query: 477 GGEYRSLAPILSSLG 433 GGE+RS L+ G Sbjct: 279 GGEFRSFTSYLAQHG 293 >gb|KYP40244.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 720 Score = 152 bits (384), Expect = 4e-37 Identities = 79/211 (37%), Positives = 111/211 (52%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FCS+C +GK H + + Q + P LI +D+WGP+ TS G+ YYV F+D ++++TW Sbjct: 464 FCSSCYVGKSHRLPSSASQTVYSAPLDLIFTDLWGPSHITSFSGYIYYVAFIDAFSKYTW 523 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 +YPLK++ L F F+ + + G +S + CPH Sbjct: 524 VYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGVYQAFTSFLATNGIEHRLICPH 583 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 TH QNG +RK LP++FW TA+Y INR P+ LN F Sbjct: 584 THHQNGVVERKHRHIVEIGLTLLHHASLPLQFWDFTFTTAIYLINRFPSAALNFDVPFTV 643 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKLH 134 L+N+ PDY FL+TFGCACFP+LRP + KLH Sbjct: 644 LFNKSPDYKFLRTFGCACFPFLRPCASHKLH 674 Score = 90.9 bits (224), Expect = 3e-16 Identities = 79/249 (31%), Positives = 107/249 (42%), Gaps = 11/249 (4%) Frame = -1 Query: 1146 ISSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALK 967 I+S ++L VP ITKNLLS S+F KDN V EFH HCLVK K T++VLL Sbjct: 359 INSQFKFQLNNLLHVPLITKNLLSASKFAKDNCVFFEFHANHCLVKSKETNEVLL----- 413 Query: 966 EGLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFL 787 Q+Y L S + S ++WH RLGHP VL+ V Sbjct: 414 ----QVYCLNLNKSSDV--------------SSSSTMWHTRLGHPNSHVLKLVLTQC--N 453 Query: 786 FLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLIL-------QWMVLN 628 LP N + C C S +Y PL ++ + Sbjct: 454 LLPSNTYVTEF-----CSSCYVGKSHRLPSSASQ---TVYSAPLDLIFTDLWGPSHITSF 505 Query: 627 TMYILWMITLDTLG----CIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRS 460 + YI ++ +D LK K E + F F A+ E QF TKI ++QSD GG Y++ Sbjct: 506 SGYIYYVAFIDAFSKYTWVYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGVYQA 565 Query: 459 LAPILSSLG 433 L++ G Sbjct: 566 FTSFLATNG 574 >gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1279 Score = 153 bits (386), Expect = 4e-37 Identities = 80/211 (37%), Positives = 112/211 (53%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FCS+C +GK + + Q + P +I +D+WGP+ TS G+ YYV F+D ++++TW Sbjct: 395 FCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGPSHITSFSGYLYYVAFIDAFSKYTW 454 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 +YPLK++ L F F+ + + G +S + CPH Sbjct: 455 IYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPH 514 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 TH QNG +RK LP+KFW TAVY INRLP+ LN F Sbjct: 515 THHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTT 574 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKLH 134 L+N+ PDY FL+TFGCACFP+LRPY + KL+ Sbjct: 575 LFNKSPDYKFLRTFGCACFPFLRPYASHKLN 605 Score = 103 bits (256), Expect = 3e-20 Identities = 84/256 (32%), Positives = 119/256 (46%), Gaps = 18/256 (7%) Frame = -1 Query: 1146 ISSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGAL- 970 I+S H ++L VP ITKNLLS+S+F KDN V EFH HCLVK + T++VLL+G + Sbjct: 272 INSQFKFHLNNLLHVPLITKNLLSVSKFAKDNCVFFEFHANHCLVKSQDTNEVLLQGVVG 331 Query: 969 KEGLY---QLYLTLLPGSVSTHPQSSPGAFPAVKSAD---SLSLWHNRLGHPCFSVLQNV 808 +GLY L L +L +F K++D S ++WH RLGHP VL+ Sbjct: 332 ADGLYSFPHLKLQVL------------DSFNFNKNSDVSSSSTMWHTRLGHPNSHVLK-- 377 Query: 807 FKTLVFLFLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLIL------ 646 + N L C C S +Y PL ++ Sbjct: 378 -----LVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQ---TIYSAPLDVIFTDLWG 429 Query: 645 -QWMVLNTMYILWMITLDTLG----CIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD 481 + + Y+ ++ +D LK K E + F F A+ E QF TKI ++QSD Sbjct: 430 PSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSD 489 Query: 480 *GGEYRSLAPILSSLG 433 GGEYR+ L++ G Sbjct: 490 WGGEYRAFTSFLATNG 505 >gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1358 Score = 153 bits (386), Expect = 4e-37 Identities = 80/211 (37%), Positives = 112/211 (53%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FCS+C +GK + + Q + P +I +D+WGP+ TS G+ YYV F+D ++++TW Sbjct: 474 FCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGPSHITSFSGYLYYVAFIDAFSKYTW 533 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 +YPLK++ L F F+ + + G +S + CPH Sbjct: 534 IYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPH 593 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 TH QNG +RK LP+KFW TAVY INRLP+ LN F Sbjct: 594 THHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTT 653 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKLH 134 L+N+ PDY FL+TFGCACFP+LRPY + KL+ Sbjct: 654 LFNKSPDYKFLRTFGCACFPFLRPYASHKLN 684 Score = 103 bits (256), Expect = 3e-20 Identities = 84/256 (32%), Positives = 119/256 (46%), Gaps = 18/256 (7%) Frame = -1 Query: 1146 ISSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGAL- 970 I+S H ++L VP ITKNLLS+S+F KDN V EFH HCLVK + T++VLL+G + Sbjct: 351 INSQFKFHLNNLLHVPLITKNLLSVSKFAKDNCVFFEFHANHCLVKSQDTNEVLLQGVVG 410 Query: 969 KEGLY---QLYLTLLPGSVSTHPQSSPGAFPAVKSAD---SLSLWHNRLGHPCFSVLQNV 808 +GLY L L +L +F K++D S ++WH RLGHP VL+ Sbjct: 411 ADGLYSFPHLKLQVL------------DSFNFNKNSDVSSSSTMWHTRLGHPNSHVLK-- 456 Query: 807 FKTLVFLFLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLIL------ 646 + N L C C S +Y PL ++ Sbjct: 457 -----LVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQ---TIYSAPLDVIFTDLWG 508 Query: 645 -QWMVLNTMYILWMITLDTLG----CIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD 481 + + Y+ ++ +D LK K E + F F A+ E QF TKI ++QSD Sbjct: 509 PSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSD 568 Query: 480 *GGEYRSLAPILSSLG 433 GGEYR+ L++ G Sbjct: 569 WGGEYRAFTSFLATNG 584 >emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] Length = 1455 Score = 150 bits (380), Expect = 2e-36 Identities = 80/210 (38%), Positives = 110/210 (52%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FCS+C LGK+H F T P +LIH D+WGPT S G++YY+HFVD ++R +W Sbjct: 555 FCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSW 614 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 ++ L+ + ++ F +F+ + + G S+ + CPH Sbjct: 615 IFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPH 674 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 T QQNG A+RK LP+KFW + T VY NRLPT L++ + Sbjct: 675 TQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEV 734 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L+ PDY FLK FGC+CFP LRPYNT KL Sbjct: 735 LFKSIPDYSFLKVFGCSCFPNLRPYNTHKL 764 Score = 118 bits (295), Expect = 3e-25 Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 19/263 (7%) Frame = -1 Query: 1140 SSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKEG 961 SS+PL H+L VP ITKNLLS+S+F KDN V EFH C VKD+ T VL+ G +++G Sbjct: 421 SSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDG 480 Query: 960 LYQL---YLTLLP-GSVSTHPQSSPGAFPAVKSADSLS----LWHNRLGHPCFSVLQNVF 805 LY +L L P S+S P +F + SLS LWH RLGHP + ++NV Sbjct: 481 LYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVL 540 Query: 804 KTLVFLFLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W-- 640 N + C C LS+ Y PL ++ W Sbjct: 541 S-------KCNVAHINKMDSNFCSSCCLGKIHRFPFSLSH---TTYTKPLELIHLDLWGP 590 Query: 639 --MVLNTMYILWMITLDTLG----CIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD* 478 ++ N+ Y ++ +D L+ K E +F++F VE QF KI +LQ+D Sbjct: 591 TLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDW 650 Query: 477 GGEYRSLAPILSSLGTIFRHPVP 409 GGE+R+ L+ G + R P Sbjct: 651 GGEFRAFQSYLAENGIVHRVSCP 673 >gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1268 Score = 150 bits (379), Expect = 3e-36 Identities = 82/210 (39%), Positives = 109/210 (51%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FCS+C +GK H + + + P LI +D+WGP+ S G+ YYV F+D +++ TW Sbjct: 451 FCSSCCVGKSHRLPSLVSESVYSAPLDLIFTDLWGPSHVVSHSGYVYYVSFIDAFSKFTW 510 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPH 407 +YPLK++ L F F+ + + I G ++ CPH Sbjct: 511 IYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGITHRLICPH 570 Query: 406 THQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQC 227 TH QNG +RK LP+ FW +TAVY INRLPT +LN F Sbjct: 571 THHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTV 630 Query: 226 LYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L+ Q PDY FLKTFGCACFP+LRPY T KL Sbjct: 631 LFKQTPDYKFLKTFGCACFPFLRPYTTHKL 660 Score = 100 bits (250), Expect = 2e-19 Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 16/247 (6%) Frame = -1 Query: 1113 ILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGAL-KEGLYQLYLTL 937 +L VP ITKNLLS+S+F KDN+V EFH C VK + T+++LL+G + +GLY Sbjct: 329 LLHVPSITKNLLSVSKFAKDNSVYFEFHSHCCFVKSQVTNEILLQGVVGSDGLYSFSNLE 388 Query: 936 LPG-SVSTHPQSSPGAFPAVKS---ADSLSLWHNRLGHPCFSVLQNVFKTLVFLFLPINF 769 L G SV + PAV + S + WH RL HP VL+ L +N Sbjct: 389 LQGPSVLVSSSMASSVDPAVSAFAIPSSHTSWHTRLSHPNSHVLK----------LVLNH 438 Query: 768 LFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLIL-------QWMVLNTMYILW 610 + ++ C S +Y PL ++ +V ++ Y+ + Sbjct: 439 CNIAPSNRNVSEFCSSCCVGKSHRLPSLVSESVYSAPLDLIFTDLWGPSHVVSHSGYVYY 498 Query: 609 MITLDTLG----CIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLAPILS 442 + +D LK K + + F F A+VE Q TKI ++QSD GGEYRS L+ Sbjct: 499 VSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLA 558 Query: 441 SLGTIFR 421 + G R Sbjct: 559 THGITHR 565 >gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza sativa Japonica Group] gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol protein [Oryza sativa Japonica Group] Length = 1219 Score = 149 bits (377), Expect = 6e-36 Identities = 82/209 (39%), Positives = 110/209 (52%) Frame = -3 Query: 763 CSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTWL 584 C AC+ GK H + FP ++ P +LIHSDVWGP S+ SV +YYV F+DDY++ W+ Sbjct: 479 CDACQQGKSHQLPFPKFFSVSSNPLELIHSDVWGPASD-SVGAKRYYVSFIDDYSKFVWI 537 Query: 583 YPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPHT 404 Y LK + + F FQ + + + G K +S F CPHT Sbjct: 538 YFLKFKSEVFEKFKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHT 597 Query: 403 HQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQCL 224 HQQNG +RK +P+KFW + A Y INRLP ++ + L Sbjct: 598 HQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARL 657 Query: 223 YNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 ++Q PDY L+TFGCAC+P LRPYNT KL Sbjct: 658 FHQQPDYKSLRTFGCACWPNLRPYNTHKL 686 Score = 89.0 bits (219), Expect = 2e-15 Identities = 74/247 (29%), Positives = 104/247 (42%), Gaps = 10/247 (4%) Frame = -1 Query: 1143 SSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKE 964 +SS+PLH K+IL VP +KNL+S+ R DN +E H + L+KDK T + +L+G + Sbjct: 363 TSSRPLHLKNILHVPKASKNLISVHRLVADNYAFLEIHQKYFLIKDKVTRRTILEGPCRR 422 Query: 963 GLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLF 784 LY L P P S WH RLGH K +V Sbjct: 423 DLYPL------------PAGDP-IKQVFAVMPSFERWHGRLGH--------ASKPIVLRV 461 Query: 783 LPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W------MVL 631 + N L S + VC F + PL ++ W + Sbjct: 462 INQNKLPCSNESPSES-VCDACQQGKSHQLPFPKFFSVSSNPLELIHSDVWGPASDSVGA 520 Query: 630 NTMYILWMITLDTLGCIH-LKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLA 454 Y+ ++ I+ LK K EV F F ++VERQF KIL +Q+D GGEY+ L Sbjct: 521 KRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQFNRKILGMQTDWGGEYQKLN 580 Query: 453 PILSSLG 433 +G Sbjct: 581 SFFKQIG 587 >ref|XP_012066815.1| PREDICTED: uncharacterized protein LOC105629785 [Jatropha curcas] Length = 1296 Score = 149 bits (377), Expect = 6e-36 Identities = 87/211 (41%), Positives = 115/211 (54%), Gaps = 1/211 (0%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FC++CK KMH F + +T P +L++SDVWGP TS+DGF YY+ FVD YT++ W Sbjct: 579 FCNSCKCNKMHKNPFSVSSMSSTKPLELLYSDVWGPAPVTSIDGFSYYLIFVDHYTKYVW 638 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQ-DSCITK*LGW*V*KSSSHFILSWHHF*TPCP 410 LY LK + F F+ Q + S + G V S HF TP P Sbjct: 639 LYTLKQKSKVSIIFPVFKRLVENHFQTKIGSLYSDNGGEFVHLKSLLQDNGISHFLTP-P 697 Query: 409 HTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQ 230 +T + N A+R+ LP++FW TAVY INR+PT TL N S F Sbjct: 698 YTPEHNAIAERRHRHIVETGLTLLHQANLPLEFWSYAFHTAVYLINRMPTQTLQNYSPFL 757 Query: 229 CLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L+N+ P+Y LK FGC C+P+LRPYN+TKL Sbjct: 758 KLHNKEPNYAKLKVFGCLCYPWLRPYNSTKL 788 Score = 74.7 bits (182), Expect = 7e-11 Identities = 70/249 (28%), Positives = 102/249 (40%), Gaps = 11/249 (4%) Frame = -1 Query: 1146 ISSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALK 967 +S +PL ++LCVP + KNL+S+ + NNV V F+ + VKD T L++G Sbjct: 460 LSQIKPLKLDNVLCVPALDKNLISVYQLCVANNVEVAFNPSMFYVKDLNTGVRLVEGKPV 519 Query: 966 EGLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFL 787 G+Y+ P VS F V S SLWH R GHP +L+ + K Sbjct: 520 NGIYE-----WPKQVSVSNNCQSRVFHTVSC--SPSLWHQRFGHPATPILRLMLKKFNLS 572 Query: 786 FLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYG-----VPLLILQWMVLNTM 622 NF + KC + +Y P+ + + Sbjct: 573 VSDNNF----FCNSCKCNKMHKNPFSVSSMSSTKPLELLYSDVWGPAPVTSIDGFSYYLI 628 Query: 621 YI------LWMITLDTLGCIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRS 460 ++ +W+ T LK K +V F F LVE F+TKI +L SD GGE+ Sbjct: 629 FVDHYTKYVWLYT--------LKQKSKVSIIFPVFKRLVENHFQTKIGSLYSDNGGEFVH 680 Query: 459 LAPILSSLG 433 L +L G Sbjct: 681 LKSLLQDNG 689 >ref|XP_008383301.1| PREDICTED: uncharacterized protein LOC103446021 [Malus domestica] Length = 970 Score = 149 bits (376), Expect = 7e-36 Identities = 89/219 (40%), Positives = 117/219 (53%), Gaps = 10/219 (4%) Frame = -3 Query: 763 CSACKLGKMHSMSF-PSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 C +C GK + F PSV K+ PF+++HSD+WGP SVDG++YYV F+D+ T+ +W Sbjct: 545 CQSCLEGKFCKLPFYPSVN-KSVIPFEVVHSDLWGPAPCVSVDGYRYYVTFIDECTKFSW 603 Query: 586 LYPLK------TQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILS---W 434 L+PL T G + Q S I D G + K F+L Sbjct: 604 LFPLVNKSDFCTTFIGFYAYVLTQFSTKIRILQSDGG-----GEYISKPLQSFLLXKGIL 658 Query: 433 HHF*TPCPHTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPT 254 H CP+T +QNG A+RK +P KFW+ TA+Y INR+PTP Sbjct: 659 HQ--KSCPYTPEQNGMAERKHRHVIETAVTLLQTAQMPPKFWYFACQTAIYLINRMPTPL 716 Query: 253 LNNLSLFQCLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L+N SLF+ LY P L+TFGCAC+P LRPYNTTKL Sbjct: 717 LSNQSLFEALYGAVPVIHHLRTFGCACYPLLRPYNTTKL 755 Score = 73.2 bits (178), Expect = 2e-10 Identities = 71/242 (29%), Positives = 101/242 (41%), Gaps = 15/242 (6%) Frame = -1 Query: 1140 SSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCL-VKDKATHQVLLKGALKE 964 S P+ +L VP +++NLLS+ + DNN + F D C ++DKAT ++L KG Sbjct: 420 SMHPIKLNSVLYVPKLSQNLLSVHKICLDNNCWLIF-DAFCFWIQDKATGRILYKGLCSN 478 Query: 963 GLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSL---SLWHNRLGHPCFSVLQNVFKTLV 793 GLY + + P +S G L WHNRLGHP SV+ Sbjct: 479 GLYP-----ISSLANVCPAASQGMVRHKALLGQLVNSFTWHNRLGHPSNSVVS------- 526 Query: 792 FLFLPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W----MV 634 + N + + +S V C C S + +P ++ W V Sbjct: 527 LMLHKSNVVLPKTSSSVLCQSCLEGKFCKLPFYPS---VNKSVIPFEVVHSDLWGPAPCV 583 Query: 633 LNTMYILWMITLDTL----GCIHLKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEY 466 Y ++ +D L K + C +F+ F A V QF TKI LQSD GGEY Sbjct: 584 SVDGYRYYVTFIDECTKFSWLFPLVNKSDFCTTFIGFYAYVLTQFSTKIRILQSDGGGEY 643 Query: 465 RS 460 S Sbjct: 644 IS 645 >gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group] gi|108708884|gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1437 Score = 149 bits (376), Expect = 8e-36 Identities = 83/211 (39%), Positives = 110/211 (52%), Gaps = 2/211 (0%) Frame = -3 Query: 763 CSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTWL 584 C AC+ K H +SFP ++ P +L+ SDVWGP SV KYYV F+DDY++ TW+ Sbjct: 489 CDACQKAKSHQLSFPKSTSESKYPLELVFSDVWGPAPQ-SVGNNKYYVSFIDDYSKFTWI 547 Query: 583 YPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHF--ILSWHHF*TPCP 410 Y LK + F FQ + + + G K S F + HH CP Sbjct: 548 YLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFNKVGITHH--VSCP 605 Query: 409 HTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQ 230 HTHQQNG A+RK +P+KFW + +AVY INR P+ L+++S + Sbjct: 606 HTHQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLE 665 Query: 229 CLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L PDY L+ FGCAC+P LRPYN KL Sbjct: 666 RLLGHKPDYNALRVFGCACWPNLRPYNKHKL 696 Score = 92.4 bits (228), Expect = 1e-16 Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 8/243 (3%) Frame = -1 Query: 1137 SQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKEGL 958 S+ LH K +L VP KNL+S + T DN +E + +KD A + LL+G +GL Sbjct: 370 SRNLHLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLAMRRTLLRGRCHKGL 429 Query: 957 YQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLFLP 778 Y L S S+H + K S WH+RLGHP ++V++ V K+ L Sbjct: 430 YAL------PSPSSHHHQVKQVYGVTK--PSFERWHSRLGHPSYTVVEKVIKSQNLPCLD 481 Query: 777 INFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLIL-------QWMVLNTMY 619 ++ + C C S Y + L+ Q + N Y Sbjct: 482 VS------EQVSVCDACQKAKSHQLSFPKST-SESKYPLELVFSDVWGPAPQSVGNNKYY 534 Query: 618 ILWMITLDTLGCIH-LKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLAPILS 442 + ++ I+ LK K EV + F F +LVER F KI+A+Q+D GGEY+ L + Sbjct: 535 VSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFN 594 Query: 441 SLG 433 +G Sbjct: 595 KVG 597 >gb|KYP42778.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 572 Score = 147 bits (370), Expect = 1e-35 Identities = 82/213 (38%), Positives = 111/213 (52%), Gaps = 3/213 (1%) Frame = -3 Query: 766 FCSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTW 587 FC++C +GK H + TTP +LI++D+WG + S G+ YY+ FVD ++++TW Sbjct: 361 FCNSCVIGKSHRLPSLISDSVYTTPLELIYTDLWGLSHVISFSGYNYYIAFVDAFSKYTW 420 Query: 586 LYPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TP--- 416 +YPLK + L F F+ + + + G K + F+ S H T Sbjct: 421 IYPLKVKFEALLVFKHFKSMVELQLNYKIKSVQSDWGGEF-KPFTSFLAS--HGITHRLI 477 Query: 415 CPHTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSL 236 CPHTH QNG +RK LP+KFW T VY NRLP+ LN Sbjct: 478 CPHTHHQNGTVERKHRHILDSGLTLLHHASLPLKFWDFAFMTVVYLFNRLPSAALNFSVP 537 Query: 235 FQCLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 + L+ PPDY FL +FGCACFP LRPYNT KL Sbjct: 538 YTVLFKTPPDYDFLNSFGCACFPLLRPYNTHKL 570 Score = 100 bits (248), Expect = 2e-19 Identities = 78/243 (32%), Positives = 112/243 (46%), Gaps = 11/243 (4%) Frame = -1 Query: 1116 HILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKEGLYQLYLTL 937 H+L VP I KNLLS+S+F KDN+V EFH CLVK +ATH++LL+ Sbjct: 263 HLLHVPAIAKNLLSVSQFAKDNSVYFEFHPHLCLVKSQATHEILLQAT------------ 310 Query: 936 LPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLFLPINFLFVQ 757 S + PAV ++ S +LWH RLGHP VL+ V V Sbjct: 311 --------ANSVDVSAPAVLTSSSSNLWHTRLGHPNLHVLKLVLN-------QCKLGSVN 355 Query: 756 LASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---WMVLNTM-------YILWM 607 +L C C +S+ +Y PL ++ W + + + YI ++ Sbjct: 356 KNTLDFCNSCVIGKSHRLPSLISD---SVYTTPLELIYTDLWGLSHVISFSGYNYYIAFV 412 Query: 606 ITLDTLGCIH-LKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLAPILSSLGT 430 I+ LK+K+E F HF ++VE Q KI ++QSD GGE++ L+S G Sbjct: 413 DAFSKYTWIYPLKVKFEALLVFKHFKSMVELQLNYKIKSVQSDWGGEFKPFTSFLASHGI 472 Query: 429 IFR 421 R Sbjct: 473 THR 475 >gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group] gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1431 Score = 149 bits (375), Expect = 1e-35 Identities = 85/211 (40%), Positives = 109/211 (51%), Gaps = 2/211 (0%) Frame = -3 Query: 763 CSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTWL 584 C AC+ K H + FP + P +LIHSDVWGP S SV KYYV F+DDY++ W+ Sbjct: 478 CDACQQAKCHQLPFPRSTSVSNNPLELIHSDVWGPASE-SVGAKKYYVSFIDDYSKFVWI 536 Query: 583 YPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHF--ILSWHHF*TPCP 410 Y LK + Q F FQ + + + G K + F I HH CP Sbjct: 537 YFLKHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHH--VSCP 594 Query: 409 HTHQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQ 230 HTHQQNG +RK +P+KFW + A Y INRLP+ + + + Sbjct: 595 HTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLE 654 Query: 229 CLYNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 L+ Q PDY L+TFGCAC+P LRPYNT KL Sbjct: 655 RLFKQTPDYKSLRTFGCACWPNLRPYNTHKL 685 Score = 92.0 bits (227), Expect = 2e-16 Identities = 77/245 (31%), Positives = 107/245 (43%), Gaps = 10/245 (4%) Frame = -1 Query: 1137 SQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKEGL 958 S PLH K++L VP+ KNL+S+ + DN +E H + L+KDKAT + +L+G + GL Sbjct: 364 SHPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGL 423 Query: 957 YQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLFLP 778 Y LP S A + S WH RLGHP K +V L Sbjct: 424 YP-----LPARSSLR--------QAFVATPSFVRWHGRLGHPS--------KPIVLRILS 462 Query: 777 INFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---W------MVLNT 625 N L L++ V VC + PL ++ W + Sbjct: 463 QNKL-PCLSNSVNESVCDACQQAKCHQLPFPRSTSVSNNPLELIHSDVWGPASESVGAKK 521 Query: 624 MYILWMITLDTLGCIH-LKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSLAPI 448 Y+ ++ I+ LK K EV F F LVERQF KIL++Q+D GGEY L Sbjct: 522 YYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTF 581 Query: 447 LSSLG 433 + +G Sbjct: 582 FNEIG 586 >emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] Length = 1449 Score = 148 bits (374), Expect = 2e-35 Identities = 76/209 (36%), Positives = 108/209 (51%) Frame = -3 Query: 763 CSACKLGKMHSMSFPSVQIKTTTPFQLIHSDVWGPTSNTSVDGFKYYVHFVDDYTRHTWL 584 C AC+ K H + F + + P L+H+D+WGP S S G +Y++ FVDD++R +W+ Sbjct: 553 CCACQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWI 612 Query: 583 YPLKTQI*GLQ*FSSFQCSC*KTIQNQDSCITK*LGW*V*KSSSHFILSWHHF*TPCPHT 404 YPL ++ L F F+ ++ C+ G SS+ CP+T Sbjct: 613 YPLHSKDQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYT 672 Query: 403 HQQNGKAKRKXXXXXXXXXXXXXXXXLPIKFWWDVVATAVYTINRLPTPTLNNLSLFQCL 224 +QNG+A+RK LP KFW TA++ INRLPT LN S FQ L Sbjct: 673 PEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQIL 732 Query: 223 YNQPPDYGFLKTFGCACFPYLRPYNTTKL 137 + + P+Y K FGC C+PY+RPYN KL Sbjct: 733 FGKSPNYHIFKIFGCLCYPYIRPYNKNKL 761 Score = 100 bits (248), Expect = 3e-19 Identities = 72/248 (29%), Positives = 117/248 (47%), Gaps = 11/248 (4%) Frame = -1 Query: 1143 SSSQPLHHKHILCVPDITKNLLSISRFTKDNNVLVEFHDTHCLVKDKATHQVLLKGALKE 964 SSS+ + +L VPDI NL+S+S+F DNN EFH VKD+ T ++LL+G+L+ Sbjct: 427 SSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEH 486 Query: 963 GLYQLYLTLLPGSVSTHPQSSPGAFPAVKSADSLSLWHNRLGHPCFSVLQNVFKTLVFLF 784 GLY+ +P S + SS + + +LWH+RLGHP ++L+++ + Sbjct: 487 GLYRFPARFVP-SPAAFVSSSYDRSSNLSLTTTTTLWHSRLGHPADNILKHILTSCNISH 545 Query: 783 LPINFLFVQLASLVKCIVCXXXXXXXXXXXLSN*FIQMYGVPLLILQ---WMVLN----- 628 K VC N + PL +L W + Sbjct: 546 -----------QCHKNNVCCACQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTT 594 Query: 627 --TMYILWMITLDTLGCIH-LKLKYEVCNSFLHFNALVERQFKTKILALQSD*GGEYRSL 457 +IL++ I+ L K + + F+ F +LVE QF ++I L+SD GGE+++ Sbjct: 595 GARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAF 654 Query: 456 APILSSLG 433 + L++ G Sbjct: 655 SSYLATHG 662