BLASTX nr result

ID: Rehmannia27_contig00046820 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00046820
         (650 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011083000.1| PREDICTED: uncharacterized protein LOC105165...    61   4e-14
ref|XP_011086364.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    58   3e-09

>ref|XP_011083000.1| PREDICTED: uncharacterized protein LOC105165626 [Sesamum indicum]
           gi|747072194|ref|XP_011083001.1| PREDICTED:
           uncharacterized protein LOC105165626 [Sesamum indicum]
           gi|747072196|ref|XP_011083002.1| PREDICTED:
           uncharacterized protein LOC105165626 [Sesamum indicum]
          Length = 630

 Score = 61.2 bits (147), Expect(2) = 4e-14
 Identities = 43/102 (42%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
 Frame = +2

Query: 14  DKSNGKGEMEIMKSFGENQD----STTTENTE-----------KQLPRSVTLGNSHKKYX 148
           DKSNGK    +  +FGENQ+    STTTEN E           KQ PR+ TLGNSH KY 
Sbjct: 502 DKSNGKSRRGMPTAFGENQEPNLHSTTTENIEVTEKEATKYVQKQPPRATTLGNSHAKYS 561

Query: 149 XXXXXXXXXXXXXXXXXXRTFPSVSSKNASLCS--FRGEAKY 268
                             RT PS+SSK AS  S   RG+ K+
Sbjct: 562 KFPVPPPLPKSPSDSWLCRTLPSISSKKASQHSKARRGDIKW 603



 Score = 43.9 bits (102), Expect(2) = 4e-14
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +3

Query: 300 GDIKWEATFKSTKMRCHNLRYSEEVLTEAYE 392
           GDIKWEA  KS K++ HNL YSE++LT A E
Sbjct: 599 GDIKWEAMVKSKKVQHHNLHYSEDLLTPAPE 629


>ref|XP_011086364.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC105168115 [Sesamum indicum]
          Length = 671

 Score = 58.2 bits (139), Expect(2) = 3e-09
 Identities = 41/114 (35%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
 Frame = +2

Query: 2   SSPIDKSNGKGEMEIMKSFGENQD----STTTENTE-----------KQLPRSVTLGNSH 136
           SS    SN   + E+  +FGEN D    STTTEN E            QLP ++TLGNS+
Sbjct: 526 SSQFADSNKTCKTEMPMAFGENGDFSIDSTTTENIEVTEHRETESLENQLPAAITLGNSY 585

Query: 137 KKYXXXXXXXXXXXXXXXXXXXRTFPSVSSKNASLCSFRGEAKYPQNHVSRAPS 298
           + Y                   RT PSV  KN+ L S+ G    P+N  S+AP+
Sbjct: 586 QNYSEFPVPPPLPKSPSDSWLFRTLPSVPPKNSFLRSYLGATINPENKGSKAPT 639



 Score = 30.4 bits (67), Expect(2) = 3e-09
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 303 DIKWEATFKSTKMRCHNLRYSEEVL 377
           D KWE   K+TKM+  +L YSE +L
Sbjct: 641 DTKWETIVKTTKMQGRHLHYSEGLL 665


Top