BLASTX nr result
ID: Rehmannia27_contig00046342
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00046342
(663 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 264 6e-82
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 207 4e-60
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo... 203 4e-60
gb|KYP40581.1| Retrovirus-related Pol polyprotein from transposo... 194 3e-59
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 200 2e-57
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 201 8e-57
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 202 3e-56
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 198 3e-56
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 202 3e-56
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 201 5e-56
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 201 5e-56
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 200 7e-56
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 200 7e-56
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 199 2e-55
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 198 4e-55
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 198 4e-55
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 196 4e-54
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 195 6e-54
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 195 7e-54
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo... 191 7e-54
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttata]
Length = 598
Score = 264 bits (674), Expect = 6e-82
Identities = 130/219 (59%), Positives = 162/219 (73%)
Frame = -1
Query: 657 VIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMI 478
V G+GTVCLK SG VLTL +VRHVP LS+NLISCA+LE DG+ G WG G M +M+GS
Sbjct: 55 VNGIGTVCLKFVSGSVLTLKNVRHVPTLSHNLISCAVLEDDGFRGDWGDGCMNIMKGSRY 114
Query: 477 IAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNKGC 298
+ KA + N+YV A+ + S+N V NDL++LWHK LGH+S+K L IL
Sbjct: 115 LFKALRMGNMYVCSAESSA----SMNVV----QNDLSELWHKGLGHMSNKWLSILHKNQY 166
Query: 297 FGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNR 118
FG +K+ +++ C+SC+ GK V FP +P S T++LEY+HADVWGP+SVPT+GGNR
Sbjct: 167 FGNDKVSSVTLCDSCILGKQTHVLFPEYPSPNLSRCTEILEYIHADVWGPTSVPTYGGNR 226
Query: 117 YFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
YFLSIIDDYSRKV+V L+K KSDVFDKFKTWKTLIENQT
Sbjct: 227 YFLSIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLIENQT 265
>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 609
Score = 207 bits (527), Expect = 4e-60
Identities = 101/221 (45%), Positives = 142/221 (64%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+ IG+GT+ +K+ G + TL +VRHVPDL NLIS +L G++ GVM++ +GS
Sbjct: 250 CKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNVEGGVMEISKGS 309
Query: 483 MIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNK 304
++ + K NLY+L + + SV+ VA + DLT LWH RLGH+S +G+ +L+ +
Sbjct: 310 TVVIRGIKKGNLYMLQGS-TNLISESVS-VADKHTPDLTHLWHMRLGHMSERGMMVLRKQ 367
Query: 303 GCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGG 124
G + + L FCE CV GKH R+KFP + +S L+Y+H+D WGPS VP+ GG
Sbjct: 368 KLLGDHTVKELKFCEHCVVGKHHRIKFPKAQHTTKST----LDYVHSDCWGPSRVPSLGG 423
Query: 123 NRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
RYFLSIIDDYS W+ +MK+K+ F FK WK L+ENQT
Sbjct: 424 GRYFLSIIDDYSGMTWIFIMKHKNQAFKYFKEWKILVENQT 464
>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 448
Score = 203 bits (517), Expect = 4e-60
Identities = 100/220 (45%), Positives = 139/220 (63%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+ +G+GT+ L++ G + TL +VRHVPDL NLIS +L+ G++ GVM++ RGS
Sbjct: 89 CKTVGIGTIQLRMHDGVIRTLTEVRHVPDLKKNLISVGVLDSKGFKCNVKNGVMEIKRGS 148
Query: 483 MIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNK 304
++ + K NLY+L S + SV+ VA DLT LWH RLGH+S +G+ IL +
Sbjct: 149 TVVMRGFKKGNLYMLQGSTSS-ISESVS-VAEKNIPDLTYLWHMRLGHMSERGMMILSRQ 206
Query: 303 GCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGG 124
G + + L FCE CV+GK R+KFP Q ++ L+Y+H+D WGPS VP+ GG
Sbjct: 207 QLLGNHTVKELRFCEHCVFGKQHRIKFPKA----QHSTKSTLDYIHSDCWGPSQVPSLGG 262
Query: 123 NRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQ 4
RYFLSIIDDYSR W+ + K+K+ F FK WK L+E Q
Sbjct: 263 GRYFLSIIDDYSRMTWIFITKHKNQAFKCFKEWKILMEKQ 302
>gb|KYP40581.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 218
Score = 194 bits (493), Expect = 3e-59
Identities = 94/218 (43%), Positives = 138/218 (63%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+++G+GT+ L++ G + TL +VRHVPDL NNLIS +L+ ++ GVM++ RGS
Sbjct: 7 CKIVGIGTIQLRMHDGVIRTLTEVRHVPDLKNNLISVGVLDSKSFKCNVKNGVMEIKRGS 66
Query: 483 MIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNK 304
++ + K NLY+L S + S++ VA DLT LWH RLGH+S +G+ IL +
Sbjct: 67 TLVMRGFKKGNLYMLQGSTSS-ISESIS-VAEKNIPDLTYLWHMRLGHMSERGMMILSKQ 124
Query: 303 GCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGG 124
G + + L F + C++GK R+KFP Q ++ L+Y+H+D WGPS VP+ GG
Sbjct: 125 QLLGNHTVKELRFYDHCIFGKEHRIKFPKA----QHSTKSTLDYIHSDCWGPSQVPSLGG 180
Query: 123 NRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIE 10
RYFLSIID+YSR W+ +MK+K+ F F WK L+E
Sbjct: 181 GRYFLSIIDEYSRMTWIFIMKHKNQAFICFMEWKVLME 218
>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 593
Score = 200 bits (508), Expect = 2e-57
Identities = 99/221 (44%), Positives = 140/221 (63%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+ I +GT+ +K+ G + TL +VRHVPDL NLIS +L+ G++ GVM++ +GS
Sbjct: 302 CKTISIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLDTKGFKCNVEGGVMEINKGS 361
Query: 483 MIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNK 304
I+ + K NLY+L + + S++ VA + DLT LWH RLGH+S +G+ +L +
Sbjct: 362 TIVIRGIKKGNLYMLQGS-TNLISESIS-VADKHTLDLTRLWHMRLGHMSERGMMVLSKQ 419
Query: 303 GCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGG 124
+ + L FCE CV GKH R KFP + +S L+Y+H++ WGPS VP+ GG
Sbjct: 420 KLLRDHTVKELKFCEHCVLGKHHRSKFPKAQHTTKST----LDYVHSNCWGPSRVPSLGG 475
Query: 123 NRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
RYFLSIIDDYSR W+ +MK+K+ F FK WK L+ENQT
Sbjct: 476 GRYFLSIIDDYSRMTWIFIMKHKNQAFKYFKEWKILVENQT 516
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 201 bits (511), Expect = 8e-57
Identities = 98/223 (43%), Positives = 147/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 302 CEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGS 361
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V AV+ +SN D T+LWH RLGH+S GL L
Sbjct: 362 LVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELS 418
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 419 KRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 474
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 475 GGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 517
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 202 bits (513), Expect = 3e-56
Identities = 97/223 (43%), Positives = 147/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 336 CEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 395
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V AV+ +SN D T+LWH RLGH++ GL L
Sbjct: 396 LVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELS 452
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 453 KRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 508
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 509 GGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 551
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 198 bits (504), Expect = 3e-56
Identities = 94/221 (42%), Positives = 141/221 (63%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C++ G+GT+ +K G + TL++VR +PDL NLIS LE G + GV+K+ +G+
Sbjct: 323 CKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGA 382
Query: 483 MIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNK 304
+++ KA + +LY+L S V S ++ D T LWH RLGH+S KG+ +L +
Sbjct: 383 IVLLKANRIGSLYILQG---SIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQ 439
Query: 303 GCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGG 124
G G + L FCE CV+GK +RV F + T+ + L+Y+H+D+WGPS VP++GG
Sbjct: 440 GLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGT----LDYIHSDLWGPSKVPSYGG 495
Query: 123 NRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
RY ++IIDD+SRKVWV +++K++ F FK WKTL+E QT
Sbjct: 496 CRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTLVETQT 536
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 202 bits (513), Expect = 3e-56
Identities = 97/223 (43%), Positives = 147/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 543 CEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 602
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V AV+ +SN D T+LWH RLGH++ GL L
Sbjct: 603 LVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELS 659
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 660 KRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 715
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 716 GGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 758
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 201 bits (511), Expect = 5e-56
Identities = 97/223 (43%), Positives = 147/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G++ TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 371 CEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 430
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V AV+ +SN D T+LWH RLGH+S GL L
Sbjct: 431 LVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELS 487
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+ + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 488 KRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPACKTSF 543
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 544 GGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 586
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 201 bits (511), Expect = 5e-56
Identities = 97/223 (43%), Positives = 147/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G++ TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 371 CEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 430
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V AV+ +SN D T+LWH RLGH+S GL L
Sbjct: 431 LVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELS 487
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+ + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 488 KRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPACKTSF 543
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 544 GGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 586
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 200 bits (508), Expect = 7e-56
Identities = 97/223 (43%), Positives = 146/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+G V +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 168 CEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 227
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V AV+ +SN D T+LWH RLGH+S GL L
Sbjct: 228 LVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELS 284
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 285 KRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 340
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 341 GGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 383
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 200 bits (508), Expect = 7e-56
Identities = 97/223 (43%), Positives = 146/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+G V +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 168 CEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 227
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V AV+ +SN D T+LWH RLGH+S GL L
Sbjct: 228 LVVMKADIKSANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELS 284
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 285 KRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 340
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 341 GGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 383
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 199 bits (507), Expect = 2e-55
Identities = 98/223 (43%), Positives = 145/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G + TL DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 245 CEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 304
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K NLY L + + +V AV+ +SN D T+LWH RLGH+S GL L
Sbjct: 305 LVVMKADIKYANLYHLRG---TTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELS 361
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 362 KRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 417
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K FD FK WKT++E QT
Sbjct: 418 GGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 460
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 198 bits (504), Expect = 4e-55
Identities = 94/221 (42%), Positives = 141/221 (63%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C++ G+GT+ +K G + TL++VR +PDL NLIS LE G + GV+K+ +G+
Sbjct: 27 CKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGA 86
Query: 483 MIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNK 304
+++ KA + +LY+L S V S ++ D T LWH RLGH+S KG+ +L +
Sbjct: 87 IVLLKANRIGSLYILQG---SIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQ 143
Query: 303 GCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGG 124
G G + L FCE CV+GK +RV F + T+ + L+Y+H+D+WGPS VP++GG
Sbjct: 144 GLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGT----LDYIHSDLWGPSKVPSYGG 199
Query: 123 NRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
RY ++IIDD+SRKVWV +++K++ F FK WKTL+E QT
Sbjct: 200 CRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTLVETQT 240
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 198 bits (504), Expect = 4e-55
Identities = 96/223 (43%), Positives = 145/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 336 CEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGS 395
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA K+ NLY L + + +V V+ +SN D T+LWH RLGH+S GL L
Sbjct: 396 LVVMKASIKSANLYHLQG---TTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELS 452
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 453 KRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 508
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I+DDYSRKVW +K+K F+ FK WKT++E QT
Sbjct: 509 GGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQT 551
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 196 bits (497), Expect = 4e-54
Identities = 100/223 (44%), Positives = 136/223 (60%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+++G GTV +K G L DVR++P+L NLIS ML+ GY + +++ RGS
Sbjct: 297 CKILGTGTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGS 356
Query: 483 MIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDL--TDLWHKRLGHISSKGLDILQ 310
+ + K LY L + V+T + D+ T LWH+RLGHIS +GL L+
Sbjct: 357 LTVMKGTIKNGLYTLIGQ------TVTGKVSTVLKEDVGTTKLWHQRLGHISHRGLQELE 410
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G G KL L FCE CV+GK RVKF + Q+ L+Y+H+D+WGPS VP+
Sbjct: 411 KQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQ----LDYIHSDLWGPSRVPSI 466
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RYFL++IDDYSRKVW+ +KNKS+ F KFK WK L+E QT
Sbjct: 467 GGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQT 509
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 195 bits (495), Expect = 6e-54
Identities = 95/223 (42%), Positives = 146/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 153 CEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGS 212
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V V+ +SN D T+LWH RLGH+S GL L
Sbjct: 213 LVVMKADIKSANLYHLQG---TTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELS 269
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 270 MRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 325
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I++DYSRKVW +K+K F+ FK WKT++E QT
Sbjct: 326 GGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQT 368
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 195 bits (495), Expect = 7e-54
Identities = 95/223 (42%), Positives = 146/223 (65%), Gaps = 2/223 (0%)
Frame = -1
Query: 663 CQVIGVGTVCLKLDSGFVLTLNDVRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGS 484
C+V G+GTV +K+ G + TL+DVRH+P+L +LIS L+ GY+ G G++K+ +GS
Sbjct: 321 CEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGS 380
Query: 483 MIIAKAE-KNRNLYVLHAKHDSYVPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQ 310
+++ KA+ K+ NLY L + + +V V+ +SN D T+LWH RLGH+S GL L
Sbjct: 381 LVVMKADIKSANLYHLQG---TTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELS 437
Query: 309 NKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTH 130
+G + L FCE C++GKH+RVKF + T+ + +L+Y+H+D+WGP+ +
Sbjct: 438 MRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSF 493
Query: 129 GGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQT 1
GG RY ++I++DYSRKVW +K+K F+ FK WKT++E QT
Sbjct: 494 GGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQT 536
>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 634
Score = 191 bits (485), Expect = 7e-54
Identities = 94/202 (46%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Frame = -1
Query: 594 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYV 415
VRHVP+L NLIS L+ GY + +G +++ +GS++I K + LY + V
Sbjct: 1 VRHVPELKRNLISLGTLDQGGYAYKCDQGSLRVFKGSLVILKGVRKNWLYY-SLVGQTVV 59
Query: 414 PNSVNAV----ATPVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVY 247
S N + AT S+ T LWH RLGH+S +GLD L +G FG++K++ L FCE CV
Sbjct: 60 ARSSNVIGSSNATITSDVATKLWHHRLGHVSQRGLDELAKQGVFGRDKIEPLEFCEHCVM 119
Query: 246 GKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVL 67
GK R+KF + T+ +S +L+Y+H+D+WGPS +HGG RYFLSI+DD+SRKVWV
Sbjct: 120 GKASRLKFSTSTH----SSGGVLDYVHSDLWGPSRTESHGGARYFLSIVDDFSRKVWVYF 175
Query: 66 MKNKSDVFDKFKTWKTLIENQT 1
+K K++VFD+FK WK L+E QT
Sbjct: 176 LKQKNEVFDRFKEWKVLVETQT 197