BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00042636
         (460 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALT31530.1| mediator of RNA polymerase II transcription subun...    60   6e-08
ref|XP_011094122.1| PREDICTED: mediator of RNA polymerase II tra...    60   8e-08
gb|AIU49751.1| RNA polymerase II transcription mediator, partial...    57   6e-07
ref|XP_011007274.1| PREDICTED: mediator of RNA polymerase II tra...    57   7e-07
ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Popu...    57   7e-07
gb|AIU49749.1| RNA polymerase II transcription mediator, partial...    57   9e-07
gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Erythra...    57   9e-07
ref|XP_012847192.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...    57   9e-07
gb|KJB07726.1| hypothetical protein B456_001G041100 [Gossypium r...    57   1e-06
gb|KJB07725.1| hypothetical protein B456_001G041100 [Gossypium r...    57   1e-06
gb|KJB07727.1| hypothetical protein B456_001G041100 [Gossypium r...    57   1e-06
gb|EPS70468.1| hypothetical protein M569_04289, partial [Genlise...    57   1e-06
gb|KJB07722.1| hypothetical protein B456_001G041100 [Gossypium r...    57   1e-06
ref|XP_012456282.1| PREDICTED: mediator of RNA polymerase II tra...    57   1e-06
gb|KJB07723.1| hypothetical protein B456_001G041100 [Gossypium r...    57   1e-06
ref|XP_012456203.1| PREDICTED: mediator of RNA polymerase II tra...    57   1e-06
gb|KHG17744.1| mediator of rna polymerase ii transcription subun...    57   1e-06
gb|AIU49727.1| RNA polymerase II transcription mediator, partial...    56   2e-06
ref|XP_007013395.1| RNA polymerase II transcription mediators is...    56   2e-06
ref|XP_007013392.1| RNA polymerase II transcription mediators is...    56   2e-06

>gb|ALT31530.1| mediator of RNA polymerase II transcription subunit 17-like
           protein, partial [Rehmannia glutinosa]
          Length = 339

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           +NLGKYFKQSAKSLEEQIAREARFYGALIR
Sbjct: 141 RNLGKYFKQSAKSLEEQIAREARFYGALIR 170


>ref|XP_011094122.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Sesamum indicum]
          Length = 662

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           +NLGKYFKQSAKSLEEQIAREARFYGALIR
Sbjct: 141 RNLGKYFKQSAKSLEEQIAREARFYGALIR 170


>gb|AIU49751.1| RNA polymerase II transcription mediator, partial [Populus
           trichocarpa]
          Length = 517

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           +NLGKYFKQSAK+LE+Q+AREARFYGALIR
Sbjct: 109 RNLGKYFKQSAKALEQQVAREARFYGALIR 138


>ref|XP_011007274.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Populus euphratica] gi|743926234|ref|XP_011007275.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 17 [Populus euphratica]
           gi|743926236|ref|XP_011007276.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17 [Populus
           euphratica]
          Length = 667

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           +NLGKYFKQSAK+LE+Q+AREARFYGALIR
Sbjct: 141 RNLGKYFKQSAKALEQQVAREARFYGALIR 170


>ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Populus trichocarpa]
           gi|550322157|gb|ERP52192.1| hypothetical protein
           POPTR_0015s06780g [Populus trichocarpa]
          Length = 667

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           +NLGKYFKQSAK+LE+Q+AREARFYGALIR
Sbjct: 141 RNLGKYFKQSAKALEQQVAREARFYGALIR 170


>gb|AIU49749.1| RNA polymerase II transcription mediator, partial [Erythranthe
           guttata]
          Length = 512

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           ++LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 109 RSLGKYFKQSAKALEEQIAREARFYGALIR 138


>gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Erythranthe guttata]
          Length = 657

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           ++LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 141 RSLGKYFKQSAKALEEQIAREARFYGALIR 170


>ref|XP_012847192.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 17 [Erythranthe guttata]
          Length = 660

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           ++LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 141 RSLGKYFKQSAKALEEQIAREARFYGALIR 170


>gb|KJB07726.1| hypothetical protein B456_001G041100 [Gossypium raimondii]
          Length = 553

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 27  RQLGKYFKQSAKALEEQIAREARFYGALIR 56


>gb|KJB07725.1| hypothetical protein B456_001G041100 [Gossypium raimondii]
          Length = 560

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 137 RQLGKYFKQSAKALEEQIAREARFYGALIR 166


>gb|KJB07727.1| hypothetical protein B456_001G041100 [Gossypium raimondii]
          Length = 565

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 39  RQLGKYFKQSAKALEEQIAREARFYGALIR 68


>gb|EPS70468.1| hypothetical protein M569_04289, partial [Genlisea aurea]
          Length = 582

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 11/73 (15%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALI-----------RYVLSA*GSHRYLLSHFVNC 84
           ++LGKYFKQSAK+LEEQ AREARFYGALI           R V +A G+  + +  F N 
Sbjct: 108 RSLGKYFKQSAKALEEQTAREARFYGALIRLQQNWKIKRHRLVAAASGNEGFYIDLFDNS 167

Query: 83  IMPLWAISFLPLS 45
           +  L A+ F P S
Sbjct: 168 LHDL-AVVFRPSS 179


>gb|KJB07722.1| hypothetical protein B456_001G041100 [Gossypium raimondii]
          Length = 586

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 137 RQLGKYFKQSAKALEEQIAREARFYGALIR 166


>ref|XP_012456282.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X2 [Gossypium raimondii]
           gi|763740225|gb|KJB07724.1| hypothetical protein
           B456_001G041100 [Gossypium raimondii]
          Length = 630

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 137 RQLGKYFKQSAKALEEQIAREARFYGALIR 166


>gb|KJB07723.1| hypothetical protein B456_001G041100 [Gossypium raimondii]
          Length = 662

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 137 RQLGKYFKQSAKALEEQIAREARFYGALIR 166


>ref|XP_012456203.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Gossypium raimondii]
           gi|763740222|gb|KJB07721.1| hypothetical protein
           B456_001G041100 [Gossypium raimondii]
          Length = 663

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 137 RQLGKYFKQSAKALEEQIAREARFYGALIR 166


>gb|KHG17744.1| mediator of rna polymerase ii transcription subunit 17 [Gossypium
           arboreum]
          Length = 664

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           + LGKYFKQSAK+LEEQIAREARFYGALIR
Sbjct: 137 RQLGKYFKQSAKALEEQIAREARFYGALIR 166


>gb|AIU49727.1| RNA polymerase II transcription mediator, partial [Theobroma cacao]
          Length = 517

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           ++LGKYFKQSAK+LE+QIAREARFYGALIR
Sbjct: 109 RHLGKYFKQSAKALEQQIAREARFYGALIR 138


>ref|XP_007013395.1| RNA polymerase II transcription mediators isoform 6, partial
           [Theobroma cacao] gi|508783758|gb|EOY31014.1| RNA
           polymerase II transcription mediators isoform 6, partial
           [Theobroma cacao]
          Length = 527

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           ++LGKYFKQSAK+LE+QIAREARFYGALIR
Sbjct: 122 RHLGKYFKQSAKALEQQIAREARFYGALIR 151


>ref|XP_007013392.1| RNA polymerase II transcription mediators isoform 3 [Theobroma
           cacao] gi|590578019|ref|XP_007013394.1| RNA polymerase
           II transcription mediators isoform 3 [Theobroma cacao]
           gi|508783755|gb|EOY31011.1| RNA polymerase II
           transcription mediators isoform 3 [Theobroma cacao]
           gi|508783757|gb|EOY31013.1| RNA polymerase II
           transcription mediators isoform 3 [Theobroma cacao]
          Length = 527

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = -3

Query: 230 QNLGKYFKQSAKSLEEQIAREARFYGALIR 141
           ++LGKYFKQSAK+LE+QIAREARFYGALIR
Sbjct: 27  RHLGKYFKQSAKALEQQIAREARFYGALIR 56