BLASTX nr result

ID: Rehmannia27_contig00042458 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00042458
         (551 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006376430.1| hypothetical protein POPTR_0013s12970g [Popu...    54   2e-06

>ref|XP_006376430.1| hypothetical protein POPTR_0013s12970g [Populus trichocarpa]
           gi|118481694|gb|ABK92787.1| unknown [Populus
           trichocarpa] gi|118489319|gb|ABK96464.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|550325706|gb|ERP54227.1| hypothetical protein
           POPTR_0013s12970g [Populus trichocarpa]
          Length = 126

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 32/110 (29%), Positives = 60/110 (54%)
 Frame = -1

Query: 482 AIVVLTSAAAAFLPLLRCWQPRGGDTNQGAAPATISSGLPSNYHSFVVSIMFAFSCALSA 303
           +I+++T     FL LL    P+  + +    P  I  G PS +H+FV+S++FAF+ +  +
Sbjct: 22  SILIITFTTGMFLNLL----PQE-NIDGNPVPTVIFKGHPSIFHAFVISVVFAFTGSFCS 76

Query: 302 MFLDRKRQAARVFRFSAIIWMSFGFVLLVHAIFYTQFSR*KKFALMGSKE 153
           + +D+K + +R F + ++I M+  F  +V  +F   F    K+   G K+
Sbjct: 77  LMIDKKPKVSRFFAYLSVISMASVFSTVVFPLFLDSF----KWGFQGKKQ 122


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