BLASTX nr result
ID: Rehmannia27_contig00042329
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00042329
(494 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_034521020.1| hypothetical protein [Agrobacterium rhizogen... 146 1e-50
emb|CAB65897.1| hypotethical protein, homologous to ORF13 of pRi... 135 9e-48
ref|WP_010900207.1| hypothetical protein [Agrobacterium rhizogen... 133 3e-47
dbj|BAA22337.1| unnamed protein product [Agrobacterium rhizogene... 132 1e-46
dbj|BAB85946.1| Ngorf13R [Nicotiana glauca] 120 4e-40
dbj|BAA03990.1| NgORF13 protein [Nicotiana glauca] 120 2e-39
ref|WP_042474759.1| hypothetical protein [Agrobacterium rhizogen... 111 2e-38
gb|AIM40175.1| Orf13-TA-1 [Agrobacterium rhizogenes] 97 2e-31
gb|AIM40176.1| Orf13-TA-2 [Nicotiana tomentosiformis] 97 2e-31
dbj|GAJ95531.1| hypothetical protein RRH01S_12_00880 [Rhizobium ... 78 1e-28
emb|CAA07585.1| torf13-2 [Nicotiana tabacum] 92 1e-27
emb|CAA07584.1| torf13-1 [Nicotiana tabacum] 80 1e-26
>ref|WP_034521020.1| hypothetical protein [Agrobacterium rhizogenes]
gi|114199212|gb|ABI54192.1| hypothetical protein
[Catharanthus roseus] gi|148912033|gb|ABR18544.1|
hypothetical protein [Catharanthus roseus]
gi|653177240|gb|KEA04440.1| hypothetical protein
CN09_19050 [Agrobacterium rhizogenes]
Length = 200
Score = 146 bits (369), Expect(2) = 1e-50
Identities = 74/83 (89%), Positives = 74/83 (89%)
Frame = -1
Query: 410 MARYCGGSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVE 231
MARYC G SQRLHVDDF WIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVE
Sbjct: 1 MARYCSGGSQRLHVDDFRWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVE 60
Query: 230 ATYVNYVGMELHPAGLK*PLSFV 162
A VN MELHPAGLK PLSFV
Sbjct: 61 AAEVNNAEMELHPAGLKYPLSFV 83
Score = 80.5 bits (197), Expect(2) = 1e-50
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSLA+A ACKEN HL E DLISC VPPYQTNVSLAALRE+HNSISG
Sbjct: 80 LSFVFTSLAVATACKENKHLLCEEHLEGDLISCVVPPYQTNVSLAALRELHNSISG 135
>emb|CAB65897.1| hypotethical protein, homologous to ORF13 of pRiA4 [Agrobacterium
rhizogenes] gi|151427937|gb|ABS11826.1| hypothetical
protein [Agrobacterium rhizogenes]
Length = 198
Score = 135 bits (339), Expect(2) = 9e-48
Identities = 69/83 (83%), Positives = 72/83 (86%)
Frame = -1
Query: 410 MARYCGGSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVE 231
MARY GGSSQRLHVDDF IKEPTRLKAQL+NVVETYKAAQTETLKYYI SATERVAH+E
Sbjct: 1 MARYFGGSSQRLHVDDFRLIKEPTRLKAQLVNVVETYKAAQTETLKYYIPSATERVAHME 60
Query: 230 ATYVNYVGMELHPAGLK*PLSFV 162
A +VN M LHPAG K PLSFV
Sbjct: 61 AVHVNNAEMGLHPAGFKYPLSFV 83
Score = 82.4 bits (202), Expect(2) = 9e-48
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSLA+A+ACKEN HL E DLISC VPPYQTNVSLAALREIHNSISG
Sbjct: 80 LSFVFTSLAVAKACKENKHLVCEEHLEGDLISCVVPPYQTNVSLAALREIHNSISG 135
>ref|WP_010900207.1| hypothetical protein [Agrobacterium rhizogenes]
gi|10954663|ref|NP_066598.1| riorf17 [Agrobacterium
rhizogenes] gi|468522|emb|CAA45542.1| rolD
[Agrobacterium rhizogenes] gi|10567327|dbj|BAB16136.1|
riorf17 [Agrobacterium rhizogenes]
Length = 198
Score = 133 bits (335), Expect(2) = 3e-47
Identities = 68/83 (81%), Positives = 72/83 (86%)
Frame = -1
Query: 410 MARYCGGSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVE 231
MARY G SSQRLHVDDF +IKEPTRLKAQL+NVVETYKA QTETLKYYISSATERVAHVE
Sbjct: 1 MARYFGSSSQRLHVDDFRFIKEPTRLKAQLVNVVETYKAVQTETLKYYISSATERVAHVE 60
Query: 230 ATYVNYVGMELHPAGLK*PLSFV 162
A +V+ M LHPAG K PLSFV
Sbjct: 61 AVHVDNAEMGLHPAGFKYPLSFV 83
Score = 82.0 bits (201), Expect(2) = 3e-47
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSLA+A+ACKEN HL E DLISC VPPYQTNVSLAALREIHNS+SG
Sbjct: 80 LSFVFTSLAVAKACKENKHLVCEEHLEGDLISCVVPPYQTNVSLAALREIHNSVSG 135
>dbj|BAA22337.1| unnamed protein product [Agrobacterium rhizogenes]
gi|742098|prf||2009229E rolC downstream ORF 13
Length = 200
Score = 132 bits (331), Expect(2) = 1e-46
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = -1
Query: 410 MARYCGGSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVE 231
MARY G SSQRLHVDDF +IKEPTRLKAQL+NVV+TYKA QTETLKYYISSATERVAHVE
Sbjct: 1 MARYFGSSSQRLHVDDFRFIKEPTRLKAQLVNVVKTYKAVQTETLKYYISSATERVAHVE 60
Query: 230 ATYVNYVGMELHPAGLK*PLSFV 162
A +V+ M LHPAG K PLSFV
Sbjct: 61 AVHVDNAEMGLHPAGFKYPLSFV 83
Score = 81.6 bits (200), Expect(2) = 1e-46
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSLA+A+ACKEN HL E DLISC VPPYQTNVSLAALRE+HNS+SG
Sbjct: 80 LSFVFTSLAVAKACKENKHLVCEEHLEGDLISCVVPPYQTNVSLAALREVHNSVSG 135
>dbj|BAB85946.1| Ngorf13R [Nicotiana glauca]
Length = 197
Score = 120 bits (301), Expect(2) = 4e-40
Identities = 60/77 (77%), Positives = 62/77 (80%)
Frame = -1
Query: 392 GSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVEATYVNY 213
GSS RLHVD+ CWIKEPTRLKAQL+NVVE YK AQ ETLKYYI SA E HVEA YVN
Sbjct: 6 GSSPRLHVDNLCWIKEPTRLKAQLMNVVEAYKPAQPETLKYYIPSAAEHGTHVEAAYVND 65
Query: 212 VGMELHPAGLK*PLSFV 162
MELHPAGLK PLSFV
Sbjct: 66 AEMELHPAGLKYPLSFV 82
Score = 71.6 bits (174), Expect(2) = 4e-40
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSLA+A+A KE HL E DL++C VPPYQTNVSLAALREIHNS SG
Sbjct: 79 LSFVFTSLAVAKAYKETKHLLCEEHWDGDLLACVVPPYQTNVSLAALREIHNSFSG 134
>dbj|BAA03990.1| NgORF13 protein [Nicotiana glauca]
Length = 195
Score = 120 bits (301), Expect(2) = 2e-39
Identities = 60/77 (77%), Positives = 62/77 (80%)
Frame = -1
Query: 392 GSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVEATYVNY 213
GSS RLHVD+ CWIKEPTRLKAQL+NVVE YK AQ ETLKYYI SA E HVEA YVN
Sbjct: 5 GSSPRLHVDNLCWIKEPTRLKAQLMNVVEAYKPAQPETLKYYIPSAAEHGTHVEAAYVND 64
Query: 212 VGMELHPAGLK*PLSFV 162
MELHPAGLK PLSFV
Sbjct: 65 AEMELHPAGLKYPLSFV 81
Score = 68.9 bits (167), Expect(2) = 2e-39
Identities = 37/56 (66%), Positives = 41/56 (73%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSLA+A+A KE HL E DL++C VPPYQTNVSLAALRE HNS SG
Sbjct: 78 LSFVFTSLAVAKAYKETKHLLCEEHWDGDLLACVVPPYQTNVSLAALRERHNSFSG 133
>ref|WP_042474759.1| hypothetical protein [Agrobacterium rhizogenes]
gi|142249|gb|AAA22097.1| ORF13 [Agrobacterium
rhizogenes]
Length = 197
Score = 111 bits (277), Expect(2) = 2e-38
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = -1
Query: 392 GSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVEATYVNY 213
GSS+R H+D+F WIKEPTRLKAQL+NVVE +K+AQ ETLKYYI SA E AH EA YVN
Sbjct: 6 GSSRRFHIDEFRWIKEPTRLKAQLLNVVEAHKSAQRETLKYYIPSAAEHWAHAEAAYVND 65
Query: 212 VGMELHPAGLK*PLSFV 162
MELH AG K PLSFV
Sbjct: 66 AEMELHQAGWKYPLSFV 82
Score = 75.1 bits (183), Expect(2) = 2e-38
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSL +A+ACKEN HL + L +CAVPPYQTNVSLAALREIHNS+SG
Sbjct: 79 LSFVFTSLDVAKACKENKHLLCKEDSDGQLFACAVPPYQTNVSLAALREIHNSVSG 134
>gb|AIM40175.1| Orf13-TA-1 [Agrobacterium rhizogenes]
Length = 210
Score = 97.1 bits (240), Expect(2) = 2e-31
Identities = 53/93 (56%), Positives = 67/93 (72%)
Frame = -1
Query: 440 FSKLT*SGS*MARYCGGSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYIS 261
+ KL+ + S MAR G SQ+LHVDD WIK+P +LK +L+NVVE YK+AQTETLKYY+
Sbjct: 5 YKKLSVTAS-MAR--PGRSQQLHVDDLRWIKDPLQLKDELLNVVEAYKSAQTETLKYYMP 61
Query: 260 SATERVAHVEATYVNYVGMELHPAGLK*PLSFV 162
SA E HVE ++ MELHPAGL P++FV
Sbjct: 62 SAAEGRTHVEVACLSDSEMELHPAGLTFPMAFV 94
Score = 65.9 bits (159), Expect(2) = 2e-31
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -3
Query: 180 VTSVLRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
+T + VFTS A+A ACK+ L + +L++C VPPYQTNVSLAALREIHNS SG
Sbjct: 87 LTFPMAFVFTSKAMAVACKKKQRLLCKEGSDRELLACDVPPYQTNVSLAALREIHNSCSG 146
>gb|AIM40176.1| Orf13-TA-2 [Nicotiana tomentosiformis]
Length = 210
Score = 96.7 bits (239), Expect(2) = 2e-31
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = -1
Query: 392 GSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVEATYVNY 213
G SQ+LHVDD WIK+P +LK +L+NVVE YK+AQTETLKYY+ SA E HVE ++
Sbjct: 18 GRSQQLHVDDLRWIKDPLQLKDELLNVVEAYKSAQTETLKYYMPSAAEGRTHVEVACLSD 77
Query: 212 VGMELHPAGLK*PLSFV 162
MELHPAGL P++FV
Sbjct: 78 SEMELHPAGLTFPMAFV 94
Score = 65.9 bits (159), Expect(2) = 2e-31
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -3
Query: 180 VTSVLRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
+T + VFTS A+A ACK+ L + +L++C VPPYQTNVSLAALREIHNS SG
Sbjct: 87 LTFPMAFVFTSKAMAVACKKKQRLLCKEGSDGELLACDVPPYQTNVSLAALREIHNSCSG 146
>dbj|GAJ95531.1| hypothetical protein RRH01S_12_00880 [Rhizobium rhizogenes NBRC
13257]
Length = 173
Score = 78.2 bits (191), Expect(2) = 1e-28
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = -1
Query: 335 LKAQLINVVETYKAAQTETLKYYISSATERVAHVEATYVNYVGMELHPAGLK*PLSFV 162
+KAQL+NVVE +K+AQ ETLKYYI SA E AH EA YVN MELH AG K PLSFV
Sbjct: 1 MKAQLLNVVEAHKSAQRETLKYYIPSAAEHWAHAEAAYVNDAEMELHQAGWKYPLSFV 58
Score = 75.1 bits (183), Expect(2) = 1e-28
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = -3
Query: 168 LRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
L VFTSL +A+ACKEN HL + L +CAVPPYQTNVSLAALREIHNS+SG
Sbjct: 55 LSFVFTSLDVAKACKENKHLLCKEDSDGQLFACAVPPYQTNVSLAALREIHNSVSG 110
>emb|CAA07585.1| torf13-2 [Nicotiana tabacum]
Length = 145
Score = 91.7 bits (226), Expect(2) = 1e-27
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -1
Query: 386 SQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVEATYVNYVG 207
SQRLHVDD WIK+P ++ +L+NVVE YK+AQTETLKYY+ SA E HVE ++
Sbjct: 1 SQRLHVDDLRWIKDPPSIEDELLNVVEAYKSAQTETLKYYMPSAAEGRTHVEVACLSDSE 60
Query: 206 MELHPAGLK*PLSF 165
MELHPAGL P++F
Sbjct: 61 MELHPAGLTFPMAF 74
Score = 58.5 bits (140), Expect(2) = 1e-27
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = -3
Query: 156 FTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSISG 1
FTS A+A A K+ L + +L++C VPPYQTNVSLAALREIHNS SG
Sbjct: 76 FTSKAMAVARKKKQRLLCKEGSDGELLACDVPPYQTNVSLAALREIHNSCSG 127
>emb|CAA07584.1| torf13-1 [Nicotiana tabacum]
Length = 192
Score = 79.7 bits (195), Expect(2) = 1e-26
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = -1
Query: 392 GSSQRLHVDDFCWIKEPTRLKAQLINVVETYKAAQTETLKYYISSATERVAHVEATYVNY 213
G SQ+LHVDD WIK+P +LK +L+NVVE YK+AQTETLKYY+ SA E HVE ++
Sbjct: 5 GRSQQLHVDDLRWIKDPLQLKDELLNVVEAYKSAQTETLKYYMPSAAEGRTHVEVACLSD 64
Query: 212 VGMEL 198
MEL
Sbjct: 65 SEMEL 69
Score = 67.0 bits (162), Expect(2) = 1e-26
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = -3
Query: 186 VEVTSVLRLVFTSLALAQACKENNHLTPEWAP*CDLISCAVPPYQTNVSLAALREIHNSI 7
+E+T + VFTS A+A ACK+ L + +L++C VPPYQTNVSLAALREIHNS+
Sbjct: 67 MELTFPMAFVFTSKAMAVACKKKQRLLCKEGSDRELLACDVPPYQTNVSLAALREIHNSL 126
Query: 6 SG 1
G
Sbjct: 127 LG 128