BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00040030
         (820 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_047586248.1| radical SAM protein [Methylibium sp. YR605]       112   5e-30
ref|WP_054019196.1| hypothetical protein [Ideonella sakaiensis] ...    99   1e-26
gb|ACM21670.1| radical SAM domain iron-sulfur cluster-binding ox...    97   2e-21
gb|KJV05624.1| hypothetical protein VZ94_16790 [Methylococcaceae...    59   9e-07
ref|WP_029501894.1| radical SAM protein [Lachnoclostridium phyto...    57   6e-06

>ref|WP_047586248.1| radical SAM protein [Methylibium sp. YR605]
          Length = 268

 Score =  112 bits (279), Expect(2) = 5e-30
 Identities = 53/104 (50%), Positives = 69/104 (66%)
 Frame = -2

Query: 450 PTSFFCQLEITTRCNFSCSYCAGPAMNQQDMAWKKFSAIIGTLSMQCSHCTVSPQDKGEP 271
           P   F Q+EITTRCNF C YCAG  M Q+DM W++F  I+  +    +  TVS Q +GEP
Sbjct: 12  PQVRFHQIEITTRCNFQCFYCAGRDMAQRDMPWERFEGIVERIGG--AGATVSLQGEGEP 69

Query: 270 SLHPLFWRMADYVIANGHTPYSILNSSRIEATRIANKFPRMGIS 139
           S+HP FW M  +VIA GH PY+ILN SRI+  ++A  FP + +S
Sbjct: 70  SMHPRFWDMVAHVIARGHVPYTILNGSRIDLAQVAKHFPVIAVS 113



 Score = 47.8 bits (112), Expect(2) = 5e-30
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -1

Query: 115 SERIGRQNLPKVLSNLEELAAAMGSARITVMSIDLGQP 2
           +ERIGR NL KVL +L E+   MG  RI +MS+D+GQP
Sbjct: 122 AERIGRPNLRKVLHHLAEMVLVMGPQRIEIMSVDVGQP 159


>ref|WP_054019196.1| hypothetical protein [Ideonella sakaiensis]
           gi|908207041|dbj|GAP35123.1| hypothetical protein
           ISF6_0694 [Ideonella sakaiensis]
          Length = 274

 Score = 99.0 bits (245), Expect(2) = 1e-26
 Identities = 48/100 (48%), Positives = 65/100 (65%)
 Frame = -2

Query: 438 FCQLEITTRCNFSCSYCAGPAMNQQDMAWKKFSAIIGTLSMQCSHCTVSPQDKGEPSLHP 259
           F Q+E+TT CN++C YCAG AM Q+ M    F+ ++  L       TVS Q +GEP+LHP
Sbjct: 8   FVQVELTTVCNYACVYCAGRAMPQRHMDDAVFADVLRRLPAGPPGGTVSLQGEGEPTLHP 67

Query: 258 LFWRMADYVIANGHTPYSILNSSRIEATRIANKFPRMGIS 139
            FW + D V A+G TPY+I N +R+E  R A  FPR+G+S
Sbjct: 68  RFWALVDAVQAHGWTPYTITNGTRVEPARFAAAFPRLGVS 107



 Score = 49.7 bits (117), Expect(2) = 1e-26
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 SERIGRQNLPKVLSNLEELAAAMGSARITVMSIDLGQP 2
           S RIGR +L KVL+NL+ L AA+G AR+ V S+DLGQP
Sbjct: 116 SARIGRPHLAKVLANLDALCAALGPARLIVHSVDLGQP 153


>gb|ACM21670.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter daltonii FRC-32]
          Length = 262

 Score = 97.4 bits (241), Expect(2) = 2e-21
 Identities = 49/100 (49%), Positives = 66/100 (66%)
 Frame = -2

Query: 438 FCQLEITTRCNFSCSYCAGPAMNQQDMAWKKFSAIIGTLSMQCSHCTVSPQDKGEPSLHP 259
           F Q+EITT CNF C YCAG  M Q+ M    F+ I+ +L ++   CT+S Q +GEP+LHP
Sbjct: 11  FIQIEITTICNFDCFYCAGRNMPQRHMGLDLFNTILASLPLE--PCTISLQGEGEPTLHP 68

Query: 258 LFWRMADYVIANGHTPYSILNSSRIEATRIANKFPRMGIS 139
            F  MA  VI  GH PY+I N S ++A+ IA  FP++G+S
Sbjct: 69  HFISMAKQVIEAGHIPYTITNCSCLDASVIAEVFPQIGVS 108



 Score = 33.5 bits (75), Expect(2) = 2e-21
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -1

Query: 124 PRYSERIGRQNLPKVLSNLEELAAAMGSARITVMSIDLGQ 5
           P  ++R+GR +L +V+ NL+ L   MG  R+ + +++ GQ
Sbjct: 114 PGEAQRLGRHDLRQVVENLDRLLQRMGPDRVILHTVNYGQ 153


>gb|KJV05624.1| hypothetical protein VZ94_16790 [Methylococcaceae bacterium Sn10-6]
          Length = 221

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -2

Query: 297 VSPQDKGEPSLHPLFWRMADYVIANGHTPYSILNSSRIEATRIANKFPRMGIS 139
           VS Q +GEP +HPLFW M + V  +G+ PY+I N S I+  RI   FP++GIS
Sbjct: 19  VSLQGEGEPMVHPLFWSMVEKVRDSGYIPYTITNGSIIDCQRIKQYFPQIGIS 71


>ref|WP_029501894.1| radical SAM protein [Lachnoclostridium phytofermentans]
          Length = 305

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 31/83 (37%), Positives = 45/83 (54%)
 Frame = -2

Query: 438 FCQLEITTRCNFSCSYCAGPAMNQQDMAWKKFSAIIGTLSMQCSHCTVSPQDKGEPSLHP 259
           + Q+E+TTRCNF+C +C+G  M Q+DM    F  +   + M      +  Q +GEP L+P
Sbjct: 7   YMQIEVTTRCNFNCVFCSGRHMEQRDM---DFETVKKAIDMFPHLKDIVLQGEGEPLLNP 63

Query: 258 LFWRMADYVIANGHTPYSILNSS 190
            F+ MA Y    G    +I N S
Sbjct: 64  SFFDMATYAKNAGLNVITITNGS 86