BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00039960
         (881 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009165751.1| ORF6 [Atractylodes mild mottle virus] gi|926...   152   9e-39
ref|NP_659398.1| hypothetical protein [Mirabilis mosaic virus] g...   150   3e-38
ref|YP_006607893.1| transcriptional transactivator [Soybean Putn...   145   3e-36
ref|NP_619549.1| Inclusion body matrix protein [Figwort mosaic v...   144   3e-36
ref|YP_001931968.1| inclusion body/transactivation factor [Eupat...   141   2e-35
ref|YP_001931962.1| inclusion body/transactivation factor [Lamiu...   137   2e-33
ref|YP_006732335.1| inclusion body matrix protein [Dahlia mosaic...   131   2e-31
dbj|BAS06277.1| inclusion body protein [Dahlia common mosaic virus]   130   3e-31
gb|AEL30042.1| inclusion body protein [Dahlia common mosaic virus]    129   1e-30
gb|ABW81764.1| inclusion body protein [Dahlia mosaic virus-Holland]   129   1e-30
ref|NP_612578.1| Inclusion body matrix protein [Carnation etched...   129   2e-30
gb|AMN10081.1| caulimovirus viroplasmin [Angelica bushy stunt vi...   128   4e-30
gb|AEB54985.1| inclusion body protein [Dahlia mosaic virus D10]       125   2e-29
gb|AAA43816.1| VI [Figwort mosaic virus]                              126   2e-29
ref|YP_006907835.1| inclusion body matrix protein [Horseradish l...   125   4e-29
gb|AEA39177.1| inclusion body protein [Dahlia mosaic virus]           125   4e-29
emb|CAH68830.1| inclusion body matrix protein [Carnation etched ...   124   1e-28
gb|AAK19514.1| ORF VI [Strawberry vein banding virus]                 119   2e-28
sp|Q02954.1|IBMP_CAMVE RecName: Full=Transactivator/viroplasmin ...   123   2e-28
emb|CAA55975.1| unnamed protein product [Cauliflower mosaic virus]    122   3e-28

>ref|YP_009165751.1| ORF6 [Atractylodes mild mottle virus] gi|926574239|gb|ALD49091.1|
           ORF6 [Atractylodes mild mottle virus]
          Length = 538

 Score =  152 bits (383), Expect = 9e-39
 Identities = 92/249 (36%), Positives = 149/249 (59%), Gaps = 3/249 (1%)
 Frame = -3

Query: 876 ETLKPKTFSDALKKSPEKMKTLGR-IYLFPKEPNFENKEKFNLTNRDFIEIFAKARKAGT 700
           ++LKP TFS+ +++  E   +LG+ +   P  P  E  E+ +L    F   +  AR+A  
Sbjct: 224 DSLKPITFSEVIRQPKETKVSLGKPVSSQPPAPPKEQHEELSLDG--FQYWYKAAREADE 281

Query: 699 KSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKK 520
             L++E+FFTTD  ++SYFNF++ A+ + VY+AF  GL +TIYPS  L E++ FP+ F K
Sbjct: 282 SKLVDEQFFTTDNANLSYFNFVKNANPDQVYEAFVYGLVRTIYPSINLQELRSFPKDFIK 341

Query: 519 AIKTFRTKVLK-QANRNIFISVSSTICDW-GEEHSMSPYHYIEIGIAREQASYHPSEQME 346
           A+K FRTK    +A+R+I++ VSS I  +   E +  P+H I+IG +++   Y PS+ M 
Sbjct: 342 AVKKFRTKTSSGKADRDIYLKVSSAIPVFINGEIAYKPHHVIQIGFSKD-VQYTPSKVM- 399

Query: 345 TPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDIEA 166
            P  V+ +DLI    R    V  ++ + ND+S + +NY + KV++ S     I +ED++ 
Sbjct: 400 -PTTVEAKDLIELAKRKFNNVLERVFEFNDDSKVFINYVDHKVLLHSKKATTIGEEDVQK 458

Query: 165 ILWFKENST 139
           IL  ++  T
Sbjct: 459 ILQLRKTVT 467


>ref|NP_659398.1| hypothetical protein [Mirabilis mosaic virus]
           gi|21427197|gb|AAM53129.1| ORFVI [Mirabilis mosaic
           virus]
          Length = 536

 Score =  150 bits (379), Expect = 3e-38
 Identities = 84/215 (39%), Positives = 132/215 (61%), Gaps = 1/215 (0%)
 Frame = -3

Query: 789 KEPNFENKEKF-NLTNRDFIEIFAKARKAGTKSLLEERFFTTDKKDISYFNFIEGADLEL 613
           ++P  + ++ F  ++   FI ++ KAR    +  ++E+++T DK   S F F   AD  L
Sbjct: 253 QKPEEKKEDHFPKVSFEQFISLWRKARDTVPEDYVKEQYWTDDKNSRSLFIFGPNADPVL 312

Query: 612 VYKAFKCGLDKTIYPSKKLLEVKEFPEKFKKAIKTFRTKVLKQANRNIFISVSSTICDWG 433
           V+ AF  GL KTIYPS  L E+KEFP +FKKA+KTFR+K+ K  + NIFI V+S++ DW 
Sbjct: 313 VFAAFNAGLIKTIYPSGNLQEIKEFPSEFKKAVKTFRSKIAKAKDANIFIRVTSSLPDWE 372

Query: 432 EEHSMSPYHYIEIGIAREQASYHPSEQMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDE 253
           +E     YH++EIG+A+E+  + PSE+ME    + +Q +I  RI GL  +   + KI+++
Sbjct: 373 KEEDYQGYHFLEIGLAQER-EFRPSERMEDSENLHQQ-IIQVRINGLINILTAMGKIDEK 430

Query: 252 SNIKVNYCNDKVIMCS*SPKIISDEDIEAILWFKE 148
           S  K+NY +  V++ S     IS  DI  +  F++
Sbjct: 431 SKTKINYAHQHVLITSYCGTPISSTDINILSSFED 465


>ref|YP_006607893.1| transcriptional transactivator [Soybean Putnam virus]
           gi|401620161|gb|AFP95351.1| transcriptional
           transactivator [Soybean Putnam virus]
          Length = 534

 Score =  145 bits (365), Expect = 3e-36
 Identities = 92/255 (36%), Positives = 143/255 (56%), Gaps = 8/255 (3%)
 Frame = -3

Query: 876 ETLKPKTFSDALKKSPEKMKTLGRIY---LFPKEPNFENKEKFNLTNRDFIEIFAKARKA 706
           + LKP TF +ALK+  +   +LGR        K  N +++E+  L  R F   + + R+A
Sbjct: 209 DCLKPNTFCEALKQGKKTKVSLGRPVQQSTVQKSSNDQDQEE-PLCARGFEYWYLEGRRA 267

Query: 705 GTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKF 526
               L+EERFFTTD  ++SYFNF++ +  + VY+AF+ GL + IYPS  L E+K FP+ F
Sbjct: 268 SESKLIEERFFTTDNANVSYFNFLKNSHPDQVYEAFRYGLVRMIYPSNNLQELKSFPKGF 327

Query: 525 KKAIKTFRTKVLK---QANRNIFISVSSTICDWGEEHSM--SPYHYIEIGIAREQASYHP 361
             AIK FR K  K   + +R++F+ V S+I  + E   M   P+H I+IG ++ +  Y P
Sbjct: 328 VSAIKKFRIKTSKDSGKTDRDVFVKVLSSIPAFDESGVMLHEPHHVIQIGFSKGE-KYSP 386

Query: 360 SEQMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISD 181
           S+ M  P  V+++D           + +K+    DE  I VNY + ++++ S   K I  
Sbjct: 387 SKVM--PSRVEKKDFPELAKAKFSNLLDKVYDFQDEDRIFVNYTDSRILLFSKGSKPIGK 444

Query: 180 EDIEAILWFKENSTK 136
           EDI  IL F++  T+
Sbjct: 445 EDIRCILQFQQQVTR 459


>ref|NP_619549.1| Inclusion body matrix protein [Figwort mosaic virus]
           gi|124052|sp|P09524.1|IBMP_FMVD RecName:
           Full=Transactivator/viroplasmin protein; Short=Tav;
           AltName: Full=Inclusion body matrix protein [Figwort
           mosaic virus (STRAIN DXS)] gi|58814|emb|CAA29528.1|
           unnamed protein product [Figwort mosaic virus]
          Length = 512

 Score =  144 bits (364), Expect = 3e-36
 Identities = 80/199 (40%), Positives = 119/199 (59%)
 Frame = -3

Query: 741 DFIEIFAKARKAGTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSK 562
           +F +I+ K+R +  +  ++E+F+T D    S + F+E A+  LV+ AF+ GL K IYPS 
Sbjct: 241 EFRQIWEKSRLSDLEDGVQEKFYTNDSASKSTYTFVENAEPYLVHTAFRAGLAKVIYPSP 300

Query: 561 KLLEVKEFPEKFKKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAR 382
            L E+K FPE   KAIK FR KVL   +  IFI + S+I DW +     PYH+I+IGIA+
Sbjct: 301 NLQELKWFPEGIVKAIKNFRKKVLNAKDAAIFIKIFSSIPDWVQSTRYEPYHFIQIGIAK 360

Query: 381 EQASYHPSEQMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS* 202
            +     S+  +    V  Q L   R++ L+ ++ KL +IN+ES+IKVNYC+   IM S 
Sbjct: 361 TKKELPSSKVCKEEFSV--QSLNKVRVQSLQTISQKLQEINEESSIKVNYCSSTCIMVSK 418

Query: 201 SPKIISDEDIEAILWFKEN 145
             K  S ED++ +  F+ N
Sbjct: 419 FQKKTSTEDLKLVGIFESN 437


>ref|YP_001931968.1| inclusion body/transactivation factor [Eupatorium vein clearing
           virus] gi|172041765|gb|ACB69774.1| inclusion
           body/transactivation factor [Eupatorium vein clearing
           virus]
          Length = 462

 Score =  141 bits (356), Expect = 2e-35
 Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 13/269 (4%)
 Frame = -3

Query: 870 LKPKTFSDALKKSPE--KMKTLGRI----YLFPKEPNFENKEKFNLTNRDFIEIFAKARK 709
           LKP     A KK  +  K K LG +       PK+       +  L  +DFI +   AR 
Sbjct: 198 LKPSYADVASKKINDINKKKVLGSLPQKKVEEPKDDESVQGFEATLEMQDFIYLRDMARS 257

Query: 708 AGTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEK 529
           A  KS+LE +FFTTDKKDIS FNF+ GA+ ELVY+AF  GL   IYP++ LLE++ FP  
Sbjct: 258 ANKKSILEGKFFTTDKKDISMFNFVPGANPELVYEAFCYGLVSQIYPAENLLELRSFPND 317

Query: 528 FKKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSM--SPYHYIEIGIAREQASYHPSE 355
             KA+K FR K+  + N  I++ ++S+I  W E + +   P   IEIG+ + +A+YH S 
Sbjct: 318 LVKAVKQFRKKITSKPNALIYLKITSSIPTWDESYQLLSLPVRIIEIGLCK-KANYHDSI 376

Query: 354 QMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDED 175
           Q +        DL         KV +K      ES + VN+ ++ V+M S + K+I ++ 
Sbjct: 377 QQKDD---GENDLHKLAADRYSKVLDKAHSFYQESKVFVNFTDEYVLMYSKTNKVIPEDH 433

Query: 174 IEAILWFKENSTKDKFI-----WVTGPLP 103
              I  +++  TK  F+      V GP P
Sbjct: 434 AIKIRKYQDGITKSTFLGFHSETVVGPGP 462


>ref|YP_001931962.1| inclusion body/transactivation factor [Lamium leaf distortion
           virus] gi|172041758|gb|ACB69768.1| inclusion
           body/transactivation factor [Lamium leaf distortion
           virus]
          Length = 517

 Score =  137 bits (344), Expect = 2e-33
 Identities = 72/205 (35%), Positives = 120/205 (58%), Gaps = 2/205 (0%)
 Frame = -3

Query: 756 NLTNRDFIEIFAKARKAGTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKT 577
           N+   DF+ ++  AR    +    + FFTT+KK++S++NF E +D E+V  A+ CGL KT
Sbjct: 261 NIVMEDFMNVYKAARAHKDERFFIDHFFTTEKKNLSFYNFCECSDPEIVKDAYLCGLIKT 320

Query: 576 IYPSKKLLEVKEFPEKFKKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSMS--PYHY 403
           IYP   LLE+   P++ ++ +K FR K +K  ++ I++  SSTI  WG+E      P+H+
Sbjct: 321 IYPGPNLLEISLLPKEIRRNVKHFRRKCIKDPSKKIYLKFSSTIPRWGKEGEQVYWPHHH 380

Query: 402 IEIGIAREQASYHPSEQMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCND 223
           I +G+  E+  Y PS QME  + V  QDL    ++ +++   K+ + + E    VN   +
Sbjct: 381 ITMGVRSEEEQYQPSRQMEATLEV--QDLEELAVQKIQQFIEKMFEFSKEDKTFVNLIWN 438

Query: 222 KVIMCS*SPKIISDEDIEAILWFKE 148
           +V++ S S K +S   +E IL F++
Sbjct: 439 RVLITSKSFKPLSTSHVELILLFQK 463


>ref|YP_006732335.1| inclusion body matrix protein [Dahlia mosaic virus]
           gi|32351197|gb|AAP75616.1| inclusion body matrix protein
           [Dahlia mosaic virus] gi|404435875|gb|AFR69284.1|
           inclusion body matrix protein [Dahlia mosaic virus]
          Length = 504

 Score =  131 bits (329), Expect = 2e-31
 Identities = 79/243 (32%), Positives = 129/243 (53%)
 Frame = -3

Query: 873 TLKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKFNLTNRDFIEIFAKARKAGTKS 694
           ++K K     + K  E+   L  +   P+EP+  +     ++  DFI I+ K R+   ++
Sbjct: 193 SIKWKGLRPIVPKVQERKVFLRDLKTKPEEPSQMDIYPA-MSFEDFISIWNKVRRLTPEA 251

Query: 693 LLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKKAI 514
             +E   + DK   S     + A+ +L +KAF  GL K IYPS  L E+  FPE FKKA+
Sbjct: 252 YEKEHLCSDDKASRSLLIIGQNANPDLTFKAFNAGLVKVIYPSNNLQEIGRFPEGFKKAV 311

Query: 513 KTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAREQASYHPSEQMETPIF 334
           K FR+K+    +  IFI  +ST+ DW EEHS   YH +EIG+++ +    P E  ++   
Sbjct: 312 KKFRSKIAAAKDAPIFIQCTSTLPDWEEEHSYQAYHLVEIGLSKNREFNPPQEMKDSGDL 371

Query: 333 VQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDIEAILWF 154
           + +  L   R  G  ++  K   IN E+ IK+NY +++V++ S     IS +D+  +  F
Sbjct: 372 LYQ--LAQVRTNGFTRILQKTQSINGETKIKINYSHERVLITSHYGATISRQDVSILSSF 429

Query: 153 KEN 145
           +E+
Sbjct: 430 EES 432


>dbj|BAS06277.1| inclusion body protein [Dahlia common mosaic virus]
          Length = 504

 Score =  130 bits (328), Expect = 3e-31
 Identities = 82/249 (32%), Positives = 137/249 (55%), Gaps = 5/249 (2%)
 Frame = -3

Query: 876 ETLKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKFNLTNRD-FIEIFAKARKAGT 700
           E +  K     + K+ E+ + + RI     +P    ++ F  T+ D F+ I+ KAR+   
Sbjct: 194 EKIPWKGMKPIVPKNQERRRLVNRI----PQPENSQQDNFPETSFDEFMNIWKKARRLSP 249

Query: 699 KSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKK 520
           +S   E   + DK   S+      AD +L ++AF  GL KTIYPS  L E+  FPE FKK
Sbjct: 250 ESFNTEHLCSDDKASRSFLIIGPNADPDLTFRAFNAGLVKTIYPSNNLQEIGRFPEGFKK 309

Query: 519 AIKTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAREQASYHPSEQMETP 340
           AIK +R+K+    + +I+I  +S+I DW E +S   YH IEIG++ ++  ++PS++M   
Sbjct: 310 AIKKYRSKIAAAKDASIYIQCTSSIPDWEEGNSYQAYHLIEIGLSGKR-DFNPSQEM--- 365

Query: 339 IFVQRQDLI----PFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDI 172
             V  +DL+      R+ G  ++  K   I+ ++ IK+NY  +KV++ S     IS +D+
Sbjct: 366 --VDSKDLLLQLSQVRVNGFIRILQKSQLIDGKTKIKINYAQEKVLIMSHYGAPISRQDV 423

Query: 171 EAILWFKEN 145
           + +  F+E+
Sbjct: 424 DILSSFEES 432


>gb|AEL30042.1| inclusion body protein [Dahlia common mosaic virus]
          Length = 504

 Score =  129 bits (324), Expect = 1e-30
 Identities = 81/249 (32%), Positives = 136/249 (54%), Gaps = 5/249 (2%)
 Frame = -3

Query: 876 ETLKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKFNLTNRD-FIEIFAKARKAGT 700
           E +  K     + K+ E+ + + RI     +P    ++ F  T+ D F+ I+ KAR+   
Sbjct: 194 EKIPWKGMKPIVPKNQERRRLVDRI----PQPENSQQDNFPETSFDEFMNIWKKARRLSP 249

Query: 699 KSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKK 520
           +S   E   + DK   S+      AD +L ++AF  GL KTIYPS  L E+  FPE FKK
Sbjct: 250 ESFNTEHLCSDDKASRSFLIIGPNADPDLTFRAFNAGLVKTIYPSNNLQEIGRFPEGFKK 309

Query: 519 AIKTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAREQASYHPSEQMETP 340
           AIK +R+K+    + +I+I  +S+I DW E +S   YH IEIG++ ++  ++PS++M   
Sbjct: 310 AIKKYRSKIAAAKDASIYIQCTSSIPDWEEGNSYQAYHLIEIGLSGKR-DFNPSQEM--- 365

Query: 339 IFVQRQDLI----PFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDI 172
             V  +DL+      R+ G  ++  K   I+ ++ +K+NY  +KV++ S     IS  D+
Sbjct: 366 --VDSKDLLLQLSQVRVNGFIRILQKSQLIDGKTKVKINYAQEKVLIMSHYGAPISRNDV 423

Query: 171 EAILWFKEN 145
           + +  F+E+
Sbjct: 424 DILSSFEES 432


>gb|ABW81764.1| inclusion body protein [Dahlia mosaic virus-Holland]
          Length = 504

 Score =  129 bits (324), Expect = 1e-30
 Identities = 82/249 (32%), Positives = 136/249 (54%), Gaps = 5/249 (2%)
 Frame = -3

Query: 876 ETLKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKFNLTNRD-FIEIFAKARKAGT 700
           E +  K     + K+ E+ + + RI     +P    ++ F  T+ D F+ I+ KAR+   
Sbjct: 194 EKIPWKGMKPIVPKNQERRRLVDRI----PQPENSQQDNFPETSFDEFMNIWKKARRLSP 249

Query: 699 KSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKK 520
           +S   E   + DK   S+      AD +L ++AF  GL KTIYPS  L E+  FPE FKK
Sbjct: 250 ESFNTEHLCSDDKASRSFLIIGPNADPDLTFRAFNAGLVKTIYPSNNLQEIGRFPEGFKK 309

Query: 519 AIKTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAREQASYHPSEQMETP 340
           AIK +R+K+    + +I+I  +S+I DW E +S   YH IEIG++ ++  ++PS++M   
Sbjct: 310 AIKKYRSKIAAAKDASIYIQCTSSIPDWEEGNSYQAYHLIEIGLSGKR-DFNPSQEM--- 365

Query: 339 IFVQRQDLI----PFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDI 172
             V  +DL+      R+ G  ++  K   I+ ++ IK+NY   KV++ S     IS +D+
Sbjct: 366 --VDSKDLLLQLSQVRVNGFIRILQKSQLIDGKTKIKINYAQKKVLIMSHYGAPISRQDV 423

Query: 171 EAILWFKEN 145
           + +  F+E+
Sbjct: 424 DILSSFEES 432


>ref|NP_612578.1| Inclusion body matrix protein [Carnation etched ring virus]
           gi|124051|sp|P05401.1|IBMP_CERV RecName:
           Full=Transactivator/viroplasmin protein; Short=Tav;
           AltName: Full=Inclusion body matrix protein [Carnation
           etched ring virus] gi|58864|emb|CAA28361.1| unnamed
           protein product [Carnation etched ring virus]
           gi|225357|prf||1301227F ORF 6
          Length = 496

 Score =  129 bits (323), Expect = 2e-30
 Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 10/260 (3%)
 Frame = -3

Query: 873 TLKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKFNLTNRDFIEIFAKARKAGTKS 694
           T  PK+F++AL   P  MK+LG+      E + +         + F+ I+   R    + 
Sbjct: 196 TTSPKSFAEALTTRPSNMKSLGKPKFIKIEEDDDVGFNPEFDLKSFLYIYKYGRNLEEEH 255

Query: 693 LLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKKAI 514
            L +R FT DKK+ISY NF+  +D E + ++FK GL + IYPS  L E++  P+  K ++
Sbjct: 256 FLTDRAFTIDKKEISYLNFVNNSDPEGILESFKAGLVRFIYPSTNLQELRLLPKVLKSSV 315

Query: 513 KTFRTKVLKQANRNIFISVSSTICDWGEEH-------SMSPYHYIEIGIAREQASYHPSE 355
           + FR K +K + + IF+ + STI  W + +       S  P + ++IGI++   +Y PS+
Sbjct: 316 QRFRKKCIKDSEKEIFLKIKSTIPCWEDYYNGLDDSVSYRPNYLVQIGISK-GVNYQPSQ 374

Query: 354 QMETPIFVQRQDLIPFRIRGLEKVNNKLLKIND---ESNIKVNYCNDKVIMCS*SPKIIS 184
           +ME  +  ++   I       EK       I D      I + YC+D++++ S SPK  +
Sbjct: 375 KMEAVVLKEQWQGI-----AEEKAIEFFQAIEDILSNEKIFIIYCDDRILIYSSSPKERT 429

Query: 183 DEDIEAILWFKENSTKDKFI 124
            ED+ AIL F+   +  K +
Sbjct: 430 KEDLMAILNFQSEVSSCKLL 449


>gb|AMN10081.1| caulimovirus viroplasmin [Angelica bushy stunt virus]
          Length = 514

 Score =  128 bits (321), Expect = 4e-30
 Identities = 80/236 (33%), Positives = 130/236 (55%), Gaps = 4/236 (1%)
 Frame = -3

Query: 843 LKKSPEKMKTLGRIYLFPKEPNFENKEKFNLTNRDFIEIFAKARKAGTKSLLEERFFTTD 664
           LK   +K++       FP E + +   K   +  DF  +++ AR+A  +    E F+TTD
Sbjct: 219 LKVIGKKVQVAKHQLEFPLEDDMDFNVKVENSYEDFSYVYSIARRATPRQFELEHFYTTD 278

Query: 663 KKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKKAIKTFRTKVLKQ 484
           K +ISY N    AD +L+Y+++  GL  T+YPS+K+ E+K FPE+F KA+  F+ K L +
Sbjct: 279 KTNISYINAFPLADPDLIYESYSFGLLNTVYPSEKMEEIKLFPEQFTKAVIQFKKKCLSK 338

Query: 483 ANRNIFISVSSTICDW----GEEHSMSPYHYIEIGIAREQASYHPSEQMETPIFVQRQDL 316
             + +FI   STI  W      E+ +SPYHY+ IG  +E+  Y PS+++   I +Q++DL
Sbjct: 339 -EQQVFIKFQSTIGFWEGHEDMENFISPYHYVNIGAVKERI-YFPSKEIN--IILQKEDL 394

Query: 315 IPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDIEAILWFKE 148
                     +  +L  + +E+ I VN     V++ S S K ++ ED + +  FKE
Sbjct: 395 KQIAEEKALNIIERLFTLQEEAKIHVNMATYTVLVTSFSHKGMTTEDKKKLEAFKE 450


>gb|AEB54985.1| inclusion body protein [Dahlia mosaic virus D10]
          Length = 487

 Score =  125 bits (315), Expect = 2e-29
 Identities = 86/238 (36%), Positives = 124/238 (52%), Gaps = 2/238 (0%)
 Frame = -3

Query: 870 LKPKTFSDALK-KSPEKMKTLGRIYLFP-KEPNFENKEKFNLTNRDFIEIFAKARKAGTK 697
           L+   FS+ LK K  E+M    + +L   KE   E ++   ++  +F  +++KAR     
Sbjct: 194 LRITVFSEPLKPKKKERMVEFKKDFLKNIKEAKEEEEDNIIISLDEFRLVWSKARLLSHL 253

Query: 696 SLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKKA 517
               E  +T DK   S   F  GA  ELV  AF  GL K IYPS  LLE+    E  KKA
Sbjct: 254 DFESEHIYTEDKATKSLIIFCPGASPELVSLAFYAGLTKYIYPSANLLEISLLSEGMKKA 313

Query: 516 IKTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAREQASYHPSEQMETPI 337
           IK FR K+    + NIFI  +ST+ DW +  S   YH++EIGIA+ + +  PS++M    
Sbjct: 314 IKNFRRKIADARDANIFIKCNSTLPDWYQGRSFPSYHHLEIGIAKTR-TVEPSKEMAEK- 371

Query: 336 FVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDIEAI 163
           +   ++ +  R RGL K+ + L KI   S +KVNYC+   I+ S S   I   + E +
Sbjct: 372 YEDPENWVEIRSRGLLKILSNLQKITAGSFVKVNYCSSHCIITSHSGSPIPKHEKELL 429


>gb|AAA43816.1| VI [Figwort mosaic virus]
          Length = 538

 Score =  126 bits (316), Expect(2) = 2e-29
 Identities = 68/198 (34%), Positives = 111/198 (56%)
 Frame = -3

Query: 741 DFIEIFAKARKAGTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSK 562
           +F +I+ K+R +  +  + E+F+T DK   S F F E A+  LV+ AF+ GL K IYPS 
Sbjct: 240 EFRQIWEKSRLSDLEDGVAEKFYTEDKATKSLFTFTENAEPYLVHAAFRAGLAKVIYPSP 299

Query: 561 KLLEVKEFPEKFKKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAR 382
            L E+K FP    KAIK FR KVL   +  I+I + S++ DW +    +PYH+++IGI++
Sbjct: 300 NLQELKWFPRDIVKAIKHFRKKVLNAKDSAIYIKIFSSLPDWKQSERFTPYHFLQIGISK 359

Query: 381 EQASYHPSEQMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS* 202
            +     ++      F   Q +   R   L+ +  KL +I ++S +K+NY +   I+ S 
Sbjct: 360 AKKELPSTKACVGKDFPTEQQMAAIRSSSLKTIVEKLQEIKNDSTVKINYDSSTCIISSK 419

Query: 201 SPKIISDEDIEAILWFKE 148
             K I+ E+I  +  F++
Sbjct: 420 CTKKITTEEIHKVKLFEK 437



 Score = 31.6 bits (70), Expect(2) = 2e-29
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -2

Query: 154 QRKFNKGQIHMGNGTLTSACQLLRRKLQRHECNFCK--HGKEKVDV 23
           +R  N  QI+ G+ T    C++L++K + H C +C   H ++  +V
Sbjct: 437 KRLININQINCGDHTKKLWCKILQKKYEEHLCQYCSGDHPRDNKEV 482


>ref|YP_006907835.1| inclusion body matrix protein [Horseradish latent virus]
           gi|57790328|gb|AAW56090.1| inclusion body matrix protein
           [Horseradish latent virus]
          Length = 524

 Score =  125 bits (314), Expect = 4e-29
 Identities = 84/262 (32%), Positives = 135/262 (51%), Gaps = 6/262 (2%)
 Frame = -3

Query: 876 ETLKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKF-----NLTNRDFIEIFAKAR 712
           E +KPKTF+ A+  SP+K      I L  K+P  + + K       +T  DF  ++   R
Sbjct: 202 ELVKPKTFAKAVT-SPKKSTQW--ITLGTKKPKKDPEPKEIAFQPEITIEDFQYLYDLGR 258

Query: 711 KAGTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPE 532
           K   +   +  FFTTDKK+IS FNF++ AD +++ + F+ GL KTIYPS  L E+K  P+
Sbjct: 259 KYDGEG--DTTFFTTDKKNISMFNFLKNADPQMISECFQAGLIKTIYPSANLQEIKYLPK 316

Query: 531 KFKKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSM-SPYHYIEIGIAREQASYHPSE 355
           K K A+K +RT  +K   ++IF+ + STI  W     +  P + IEIG++       P E
Sbjct: 317 KIKDAVKKYRTNCIKNTEKDIFLKIKSTIPVWSATGLLHKPKYMIEIGVS---GKVRPEE 373

Query: 354 QMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDED 175
                  +Q+++L+   +   +   + L+KIN    I VN  + + ++ S + K  + ED
Sbjct: 374 SKSMESTIQKEELMDLAVLKAQTFIDSLMKINQREKIFVNMVDYETLVYSKNLKKTTQED 433

Query: 174 IEAILWFKENSTKDKFIWVTGP 109
              I  F++     K +    P
Sbjct: 434 RSVINKFQQKLISGKILGFHSP 455


>gb|AEA39177.1| inclusion body protein [Dahlia mosaic virus]
          Length = 500

 Score =  125 bits (313), Expect = 4e-29
 Identities = 88/244 (36%), Positives = 125/244 (51%), Gaps = 8/244 (3%)
 Frame = -3

Query: 870 LKPKTFSDALKKSPEKMKTLGRIYLFPKEPNF--------ENKEKFNLTNRDFIEIFAKA 715
           L+   FS+ LK  P+K +   R+  F KE +F        + +E F ++  +F  +++KA
Sbjct: 206 LRITVFSEPLK--PKKKE---RMVEFKKEKDFLKNMEEAEKERENFIISLDEFRLVWSKA 260

Query: 714 RKAGTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFP 535
           R         E  +T DK   S   F  GA  ELV  AF  GL K IYPS  LLE+    
Sbjct: 261 RLLSHLDFESEHIYTEDKATKSLIIFCPGASPELVSLAFFAGLTKYIYPSANLLEISLLS 320

Query: 534 EKFKKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAREQASYHPSE 355
           E  KKAIK FR K+    + NIFI  SST+ DW +  S   YH++EIGIA+ + +  PS+
Sbjct: 321 EGMKKAIKNFRKKIADARDANIFIKCSSTLPDWYQGRSFPSYHHLEIGIAKTR-TVEPSK 379

Query: 354 QMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDED 175
            M    +   ++ +  R RG  K+ + L KI   S  KVNYC+   I+ S S   I + +
Sbjct: 380 VMAEK-YEDPENWVEIRARGFTKILSNLQKIKAGSFTKVNYCSSNCIITSYSGSPIPNHE 438

Query: 174 IEAI 163
            E +
Sbjct: 439 KELL 442


>emb|CAH68830.1| inclusion body matrix protein [Carnation etched ring virus]
          Length = 496

 Score =  124 bits (310), Expect = 1e-28
 Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 7/257 (2%)
 Frame = -3

Query: 873 TLKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKFNLTNRDFIEIFAKARKAGTKS 694
           T  PK+F++AL   P  MK+LG+      E + +         + F+ I+   R    + 
Sbjct: 196 TTSPKSFAEALTTRPSNMKSLGKPKFIKIEEDDDVGFNPEFDLKSFLYIYKYGRNLEEEH 255

Query: 693 LLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKKAI 514
            L +R FT DKK+ISY NF+  +D E + ++FK GL + IYPS  L E++  P+  + ++
Sbjct: 256 FLTDRAFTIDKKEISYLNFVNNSDPEGILESFKAGLVRFIYPSTNLQELRLLPKVPRSSV 315

Query: 513 KTFRTKVLKQANRNIFISVSSTICDWGEEH-------SMSPYHYIEIGIAREQASYHPSE 355
           + FR K +K + + IF+ + STI  W + H       S  P + +++GI++   +Y PS+
Sbjct: 316 QRFRKKCIKDSEKEIFLKIKSTIPCWEDYHNGLDDLVSYRPNYLVQVGISK-GVNYQPSQ 374

Query: 354 QMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDED 175
           +ME  I  ++   I    + +E     +  I     I + Y +D++++ S SPK  + ED
Sbjct: 375 KMEATILREQWQNIA-EDKAIE-FFQAIEDILSNEKIFIIYSDDRILIYSSSPKERTKED 432

Query: 174 IEAILWFKENSTKDKFI 124
           + AIL F+   +  K +
Sbjct: 433 LMAILNFQSEVSSCKLL 449


>gb|AAK19514.1| ORF VI [Strawberry vein banding virus]
          Length = 261

 Score =  119 bits (297), Expect = 2e-28
 Identities = 59/172 (34%), Positives = 102/172 (59%)
 Frame = -3

Query: 687 EERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKFKKAIKT 508
           E +FFT D K +S + FIEGAD E V +AF CGL   IYP + L E+   P+   +AIK 
Sbjct: 23  EHKFFTVDSKTLSLYGFIEGADPEYVREAFHCGLISLIYPGENLKEISLLPKDLYRAIKN 82

Query: 507 FRTKVLKQANRNIFISVSSTICDWGEEHSMSPYHYIEIGIAREQASYHPSEQMETPIFVQ 328
           +RT+V    +R I++ ++ST  +W  +  + PYH+IE+G++  +  +  S + +T     
Sbjct: 83  YRTRVCSAQSRPIYLRITSTFLEWENDDILIPYHWIEVGLSNGKIPWDKSYK-KTATVEY 141

Query: 327 RQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDI 172
             ++   R + ++ V N+  KI  +S  K+NY +DK+I+ S   ++I ++++
Sbjct: 142 LPEITALRPKRIKAVYNQCTKIFADSKKKLNYADDKIILISNYSELIKEKEL 193


>sp|Q02954.1|IBMP_CAMVE RecName: Full=Transactivator/viroplasmin protein; Short=Tav;
           AltName: Full=Inclusion body matrix protein
           gi|293186|gb|AAA62376.1| inclusion body matrix protein
           [Cauliflower mosaic virus]
          Length = 520

 Score =  123 bits (308), Expect = 2e-28
 Identities = 85/247 (34%), Positives = 131/247 (53%), Gaps = 6/247 (2%)
 Frame = -3

Query: 870 LKPKTFSDALKKSPEKMKTLGRIYLFPKEPNFENKEKF-----NLTNRDFIEIFAKARKA 706
           LKPK+F +AL  SP K K    + L  K P+ +   K       +T  DF+ ++   RK 
Sbjct: 205 LKPKSFREALT-SPPKQKAHW-LTLGTKRPSSDPAPKEISFAPEITMDDFLYLYDLGRKF 262

Query: 705 GTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFPEKF 526
             +   ++  FTTD + IS FNF + AD ++V +A+  GL KTIYPS  L E+K  P+K 
Sbjct: 263 DGEG--DDTMFTTDNEKISLFNFRKNADPQMVREAYAAGLIKTIYPSNNLQEIKYLPKKV 320

Query: 525 KKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSM-SPYHYIEIGIAREQASYHPSEQM 349
           K A+K FRT  +K   ++IF+ + STI  W  +  +  P   IEIG++++     P+E  
Sbjct: 321 KDAVKRFRTNCIKNTEKDIFLKIRSTIPVWTIQGLLHKPRQVIEIGVSKKVV---PTESK 377

Query: 348 ETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDEDIE 169
                +Q +DL    ++  E+    LL++ND+  I VN   D  ++ S + K    ED  
Sbjct: 378 AMESKIQIEDLTELAVKTGEQFIQSLLRLNDKKKIFVNMVEDDTLVYSKNIKDTVSEDQR 437

Query: 168 AILWFKE 148
           AI  F++
Sbjct: 438 AIETFQQ 444


>emb|CAA55975.1| unnamed protein product [Cauliflower mosaic virus]
          Length = 520

 Score =  122 bits (307), Expect = 3e-28
 Identities = 88/250 (35%), Positives = 133/250 (53%), Gaps = 9/250 (3%)
 Frame = -3

Query: 870 LKPKTFSDALKKSPEKMK----TLGRIY----LFPKEPNFENKEKFNLTNRDFIEIFAKA 715
           LKPK+F+ AL  SP K K    TLG       L PKE +F  +    +T  DF+ ++   
Sbjct: 205 LKPKSFAKALT-SPPKQKAHWLTLGTKRPSSDLAPKEISFAPE----ITMDDFLYLYDLG 259

Query: 714 RKAGTKSLLEERFFTTDKKDISYFNFIEGADLELVYKAFKCGLDKTIYPSKKLLEVKEFP 535
           RK   +   ++  FTTD + IS FNF + AD ++V +A+  GL KTIYPS  L E+K  P
Sbjct: 260 RKFDGEG--DDTMFTTDNEKISLFNFRKNADPQMVREAYAAGLIKTIYPSNNLQEIKYLP 317

Query: 534 EKFKKAIKTFRTKVLKQANRNIFISVSSTICDWGEEHSM-SPYHYIEIGIAREQASYHPS 358
           +K K A+K FRT  +K   ++IF+ + STI  W  +  +  P   IEIG++++     P+
Sbjct: 318 KKVKDAVKRFRTNCIKNTEKDIFLKIRSTIPVWTIQGLLHKPRQVIEIGVSKKVV---PT 374

Query: 357 EQMETPIFVQRQDLIPFRIRGLEKVNNKLLKINDESNIKVNYCNDKVIMCS*SPKIISDE 178
           E       +Q +DL    ++  E+    LL++ND+  I VN      ++ S + K    E
Sbjct: 375 ESKAMESKIQIEDLTELAVKTGEQFIQSLLRLNDKKKIFVNMVEHDTLVYSKNIKDTVSE 434

Query: 177 DIEAILWFKE 148
           D  AI  F++
Sbjct: 435 DQRAIETFQQ 444