BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00039896
         (1179 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei...   121   8e-65
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei...   121   2e-63
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei...   121   2e-63
ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976...   129   3e-62
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei...   121   3e-61
ref|XP_012856897.1| PREDICTED: uncharacterized protein LOC105976...   135   6e-60
gb|KYP33949.1| Retrovirus-related Pol polyprotein from transposo...   114   1e-58
ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835...   119   2e-58
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   115   1e-57
ref|XP_013594438.1| PREDICTED: uncharacterized protein LOC106302...   119   3e-57
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]               114   6e-56
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   118   7e-56
ref|XP_010542220.1| PREDICTED: uncharacterized protein LOC104815...   108   1e-55
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   119   1e-55
gb|KYP37322.1| Retrovirus-related Pol polyprotein from transposo...   127   2e-54
gb|KYP69518.1| Retrovirus-related Pol polyprotein from transposo...   125   5e-54
gb|KYP41111.1| Retrovirus-related Pol polyprotein from transposo...   125   5e-54
gb|AAC62795.1| contains similarity to retroviral aspartyl protea...   114   1e-53
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   112   3e-53
ref|XP_010495376.1| PREDICTED: uncharacterized protein LOC104772...   116   4e-53

>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 isoform X2 [Tarenaya hassleriana]
          Length = 1244

 Score =  121 bits (304), Expect(3) = 8e-65
 Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LPN +++    AG V LS  +TL + LF+P FH+NLLSVS LT  +   V F   SF+
Sbjct: 437 VSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFI 496

Query: 579 IQGIHNQTLIGKGNRTGDVYILD---STPPTISVNS----VTHSSPAQLWHSRLGHLSWK 737
           IQ +    +IGKG +  ++YIL+   ++  TIS+ S       ++   LWH RLGH S  
Sbjct: 497 IQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDI 556

Query: 738 RLNLLQHS--LKLGQLHSSDV-CYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           R++ +  S  LK     +S + C +CPLAKQRRLSF  ++H+   PF  +H D+W
Sbjct: 557 RVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVW 611



 Score =  114 bits (285), Expect(3) = 8e-65
 Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKM--------IKAFRS 1048
            GP + ++  G  +FL++VDD +R TWVYL K+KSDVL   P+F           IK  RS
Sbjct: 612  GPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRS 671

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F   FA+ G+LHQFSC  TPQQNS+VERKHQH+LNV
Sbjct: 672  DNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNV 714



 Score = 62.0 bits (149), Expect(3) = 8e-65
 Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEANTSR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHSTPISTTHDI 181
           CF+LHGYPPG+K+    N+     +           Q H                     
Sbjct: 317 CFRLHGYPPGHKSHPNWNSRSGPPRPKSQSLEKAQNQVHSLLSQ---------------- 360

Query: 182 LLTSHMGALSSNPSSSAIDPKPCLAG----TYYTLSCTISS----PRQWIVDSGASRHIC 337
           LL+ H G  S +  S+   P P   G    TY  L+ + S+       WI+D+GAS H+C
Sbjct: 361 LLSQHKGQGSVSLDSNFAVPSPPSPGISLVTYPLLTTSPSNITFPTAVWILDTGASTHVC 420

Query: 338 CHASAFSSLHPIVASTVTLPNNTT 409
           C+   FS +H I   +V+LPN ++
Sbjct: 421 CNLGLFSEVHDIPVVSVSLPNGSS 444


>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 isoform X1 [Tarenaya hassleriana]
          Length = 1275

 Score =  121 bits (304), Expect(3) = 2e-63
 Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LPN +++    AG V LS  +TL + LF+P FH+NLLSVS LT  +   V F   SF+
Sbjct: 468 VSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFI 527

Query: 579 IQGIHNQTLIGKGNRTGDVYILD---STPPTISVNS----VTHSSPAQLWHSRLGHLSWK 737
           IQ +    +IGKG +  ++YIL+   ++  TIS+ S       ++   LWH RLGH S  
Sbjct: 528 IQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDI 587

Query: 738 RLNLLQHS--LKLGQLHSSDV-CYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           R++ +  S  LK     +S + C +CPLAKQRRLSF  ++H+   PF  +H D+W
Sbjct: 588 RVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVW 642



 Score =  114 bits (285), Expect(3) = 2e-63
 Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKM--------IKAFRS 1048
            GP + ++  G  +FL++VDD +R TWVYL K+KSDVL   P+F           IK  RS
Sbjct: 643  GPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRS 702

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F   FA+ G+LHQFSC  TPQQNS+VERKHQH+LNV
Sbjct: 703  DNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNV 745



 Score = 57.4 bits (137), Expect(3) = 2e-63
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEANT--------SR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHST 157
           CF+LHGYPPG+K+    N+        S+ L +                A          
Sbjct: 317 CFRLHGYPPGHKSHPNWNSRSGPPRPKSQSLEKAQNQVNLVDVGSASNAALAVAQSVDGN 376

Query: 158 P----ISTTHDIL---LTSHMGALSSNPSSSAIDPKPCLAG----TYYTLSCTISS---- 292
                ++  H +L   L+ H G  S +  S+   P P   G    TY  L+ + S+    
Sbjct: 377 TGQNTLAQVHSLLSQLLSQHKGQGSVSLDSNFAVPSPPSPGISLVTYPLLTTSPSNITFP 436

Query: 293 PRQWIVDSGASRHICCHASAFSSLHPIVASTVTLPNNTT 409
              WI+D+GAS H+CC+   FS +H I   +V+LPN ++
Sbjct: 437 TAVWILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSS 475


>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 isoform X3 [Tarenaya hassleriana]
          Length = 1238

 Score =  121 bits (304), Expect(3) = 2e-63
 Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LPN +++    AG V LS  +TL + LF+P FH+NLLSVS LT  +   V F   SF+
Sbjct: 468 VSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFI 527

Query: 579 IQGIHNQTLIGKGNRTGDVYILD---STPPTISVNS----VTHSSPAQLWHSRLGHLSWK 737
           IQ +    +IGKG +  ++YIL+   ++  TIS+ S       ++   LWH RLGH S  
Sbjct: 528 IQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDI 587

Query: 738 RLNLLQHS--LKLGQLHSSDV-CYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           R++ +  S  LK     +S + C +CPLAKQRRLSF  ++H+   PF  +H D+W
Sbjct: 588 RVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVW 642



 Score =  114 bits (285), Expect(3) = 2e-63
 Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKM--------IKAFRS 1048
            GP + ++  G  +FL++VDD +R TWVYL K+KSDVL   P+F           IK  RS
Sbjct: 643  GPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRS 702

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F   FA+ G+LHQFSC  TPQQNS+VERKHQH+LNV
Sbjct: 703  DNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNV 745



 Score = 57.4 bits (137), Expect(3) = 2e-63
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEANT--------SR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHST 157
           CF+LHGYPPG+K+    N+        S+ L +                A          
Sbjct: 317 CFRLHGYPPGHKSHPNWNSRSGPPRPKSQSLEKAQNQVNLVDVGSASNAALAVAQSVDGN 376

Query: 158 P----ISTTHDIL---LTSHMGALSSNPSSSAIDPKPCLAG----TYYTLSCTISS---- 292
                ++  H +L   L+ H G  S +  S+   P P   G    TY  L+ + S+    
Sbjct: 377 TGQNTLAQVHSLLSQLLSQHKGQGSVSLDSNFAVPSPPSPGISLVTYPLLTTSPSNITFP 436

Query: 293 PRQWIVDSGASRHICCHASAFSSLHPIVASTVTLPNNTT 409
              WI+D+GAS H+CC+   FS +H I   +V+LPN ++
Sbjct: 437 TAVWILDTGASTHVCCNLGLFSEVHDIPVVSVSLPNGSS 475


>ref|XP_012857659.1| PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata]
          Length = 944

 Score =  129 bits (323), Expect(3) = 3e-62
 Identities = 63/103 (61%), Positives = 77/103 (74%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKM--------IKAFRS 1048
            GP+   +YSG  YF+TLVDD +RFTWV+L K KS+V+TV+P+F KM        IK FRS
Sbjct: 599  GPFKVPSYSGFHYFVTLVDDYSRFTWVHLLKTKSEVITVVPRFLKMVLNQFGKSIKVFRS 658

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F   F + GV+HQFSCV TPQQN++VERKHQH+LNV
Sbjct: 659  DNAYELQFKSLFDELGVIHQFSCVYTPQQNAIVERKHQHILNV 701



 Score =  114 bits (284), Expect(3) = 3e-62
 Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LP+++ +     GDV L+  L L N  ++P+F FNL+SVS L   S  +V F   SF 
Sbjct: 433 VVLPDSSMVLVNCIGDVQLTTHLVLHNVFYVPEFKFNLVSVSALLHGSSYVVIFDEFSFS 492

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPAQLWHSRLGHLSWKRLNLL-- 752
           IQ     T IGKGN+   +Y+LD    +   ++  +   A +WH RLGH+   +L  L  
Sbjct: 493 IQD-RLMTQIGKGNKVQGLYVLDPVSASPIEHAFCNKISATVWHHRLGHIPQPKLAFLAK 551

Query: 753 QHSLKLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           + SL + ++  S  CY+CPLAKQ+RL F +++ +    F  +H DIW
Sbjct: 552 KFSLSVDKISESSCCYVCPLAKQKRLHFSNSSSVSTAMFDLIHCDIW 598



 Score = 46.6 bits (109), Expect(3) = 3e-62
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 24/159 (15%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEAN-TSR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHSTPISTTHD 178
           C++LHG+PPGY+   +   TS    Q                + +  S   S P S    
Sbjct: 284 CYRLHGFPPGYQPRQKPGMTSNQSSQTKFAVNQVSDIVHSDASLNSGSLSQSLPSSDNFL 343

Query: 179 ILLT------------SHMGALSSNP----SSSAIDPKP-------CLAGTYYTLSCTIS 289
             +T            SH+   ++ P    +S   D          CL    +T S    
Sbjct: 344 DAMTASQCQQLLSYVSSHLANKANQPPHDKNSEIFDTSHISRVTGICLFNALHTPSFM-- 401

Query: 290 SPRQWIVDSGASRHICCHASAFSSLHPIVASTVTLPNNT 406
            P  WI+DSGASRHIC + S F ++  +  + V LP+++
Sbjct: 402 -PHHWILDSGASRHICHNKSLFLNMKSVSNARVVLPDSS 439


>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 isoform X4 [Tarenaya hassleriana]
          Length = 940

 Score =  121 bits (304), Expect(3) = 3e-61
 Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LPN +++    AG V LS  +TL + LF+P FH+NLLSVS LT  +   V F   SF+
Sbjct: 133 VSLPNGSSLKVTQAGTVLLSSSITLSSVLFIPTFHYNLLSVSCLTQQTSCSVHFFRDSFI 192

Query: 579 IQGIHNQTLIGKGNRTGDVYILD---STPPTISVNS----VTHSSPAQLWHSRLGHLSWK 737
           IQ +    +IGKG +  ++YIL+   ++  TIS+ S       ++   LWH RLGH S  
Sbjct: 193 IQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDI 252

Query: 738 RLNLLQHS--LKLGQLHSSDV-CYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           R++ +  S  LK     +S + C +CPLAKQRRLSF  ++H+   PF  +H D+W
Sbjct: 253 RVHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVW 307



 Score =  114 bits (285), Expect(3) = 3e-61
 Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKM--------IKAFRS 1048
            GP + ++  G  +FL++VDD +R TWVYL K+KSDVL   P+F           IK  RS
Sbjct: 308  GPCSEISTDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRS 367

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F   FA+ G+LHQFSC  TPQQNS+VERKHQH+LNV
Sbjct: 368  DNAPELGFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNV 410



 Score = 50.1 bits (118), Expect(3) = 3e-61
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
 Frame = +2

Query: 182 LLTSHMGALSSNPSSSAIDPKPCLAG----TYYTLSCTISS----PRQWIVDSGASRHIC 337
           LL+ H G  S +  S+   P P   G    TY  L+ + S+       WI+D+GAS H+C
Sbjct: 57  LLSQHKGQGSVSLDSNFAVPSPPSPGISLVTYPLLTTSPSNITFPTAVWILDTGASTHVC 116

Query: 338 CHASAFSSLHPIVASTVTLPNNTT 409
           C+   FS +H I   +V+LPN ++
Sbjct: 117 CNLGLFSEVHDIPVVSVSLPNGSS 140


>ref|XP_012856897.1| PREDICTED: uncharacterized protein LOC105976150 [Erythranthe guttata]
          Length = 746

 Score =  135 bits (340), Expect(3) = 6e-60
 Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMIKA--------FRS 1048
            GPY   +++G  YF+TLVDD +RFTWV+L K+KSDVLT IP FF M+K         FRS
Sbjct: 571  GPYRVESHNGYKYFVTLVDDYSRFTWVHLLKSKSDVLTAIPAFFHMVKTQFNCNIKMFRS 630

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL FT  F+Q GVLHQFSCV TPQQN+VVERKHQH+LNV
Sbjct: 631  DNAHELQFTQLFSQLGVLHQFSCVYTPQQNAVVERKHQHILNV 673



 Score = 93.2 bits (230), Expect(3) = 6e-60
 Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LP+ + +  ++ GDV LS  L LKN  ++P F FNL+SVS L       V F   SFL
Sbjct: 425 VILPDCSLVVVEYMGDVCLSDDLILKNVFYVPSFKFNLISVSALLDRLPHTVIFDSTSFL 484

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPAQLWHSRLGHLSWKRLNLL-- 752
           IQ    +  IGKG++             I V+       A +WH+RLGH+   +L++L  
Sbjct: 485 IQDKFLKK-IGKGSK-------------IDVS-------ATVWHNRLGHIPQLKLDILST 523

Query: 753 QHSLKLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           + SL + +  ++  CYICP+AKQ+RL F  ++ + +  F  +H DIW
Sbjct: 524 KFSLAMDKPKNNSCCYICPMAKQKRLKFPISSTVSSHMFDLIHCDIW 570



 Score = 53.1 bits (126), Expect(3) = 6e-60
 Identities = 42/156 (26%), Positives = 57/156 (36%), Gaps = 23/156 (14%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEAN----------------------TSR*LHQXXXXXXXXXXXQF 115
           C+KLHGYPPGYK     +                      TS    Q             
Sbjct: 280 CYKLHGYPPGYKAKPRYSSLPQSRFSVNQVAAMESPLDYATSGSTSQPPFVSSDPVLANM 339

Query: 116 HRYAFHQCS*YHSTPISTTHDILLTSHMGALSSNPSSSAIDPKPCLAGTYYTLSCTIS-S 292
                 Q   Y S  ++    +          S+   + +    C++G     S   S  
Sbjct: 340 SAAQCQQLMAYFSNQMAAKKQV------STQQSHGDEAEVAHISCVSGICLAASLHESFQ 393

Query: 293 PRQWIVDSGASRHICCHASAFSSLHPIVASTVTLPN 400
           P  WI+DSGASRHIC   + FSSLH +  + V LP+
Sbjct: 394 PHYWIIDSGASRHICNDKTLFSSLHKVNFARVILPD 429


>gb|KYP33949.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 534

 Score =  114 bits (286), Expect(3) = 1e-58
 Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRS 1048
            GPY    Y+   YFLTLVDD +RFTW++L + K++  + I  FF +I        K  RS
Sbjct: 387  GPYRLSTYNSMRYFLTLVDDHSRFTWIHLLRTKAEATSAIKSFFNLIHTQFGVTIKQLRS 446

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA+EL   DF    G +HQFSCVE PQQN+VVERKHQHLL+V
Sbjct: 447  DNAKELALVDFLKDKGTIHQFSCVERPQQNAVVERKHQHLLSV 489



 Score =  107 bits (268), Expect(3) = 1e-58
 Identities = 61/190 (32%), Positives = 103/190 (54%), Gaps = 25/190 (13%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           +TLPN + I     G V L   + LK+ +++PQF +NLLS++ L   + L + F+   F+
Sbjct: 197 VTLPNQSHIPVCGIGTVYLDQDIVLKDVIYVPQFQYNLLSINCLLKHNSLSLLFISNKFI 256

Query: 579 IQGIHNQTLIGKGNRTGDVYILD-----STPPTISVNSV------------------THS 689
           +Q I +  +IG G     VY+L+     ++  ++++NSV                  T +
Sbjct: 257 LQDILHNKMIGAGEAVQGVYLLNQLVNPASLASVNINSVCFSDNSLNVNSNSASVNSTCT 316

Query: 690 SPAQLWHSRLGHLSWKRLNLLQHSL--KLGQLHSSDVCYICPLAKQRRLSFHSNNHLFAT 863
             A +WHSR GH++   L +L + +   +   +SS  C+ICP++K R+L F S+N+  +T
Sbjct: 317 KDAAIWHSRFGHVNDTVLKILSNKIPFSMPTSYSSSSCHICPISKFRKLPFVSHNNFCST 376

Query: 864 PFAFVHGDIW 893
           PF  VH D+W
Sbjct: 377 PFDLVHCDVW 386



 Score = 54.7 bits (130), Expect(3) = 1e-58
 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEANTSR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHSTPISTTHDI 181
           CFKLHGYP   K   + N++  ++Q           QF    +HQ               
Sbjct: 91  CFKLHGYPTHLK---QGNSNTNVNQVSDKSAKAF--QFTTDQYHQI-------------- 131

Query: 182 LLTSHMGALSSNPSSSAIDPKPCLAGTYYTLSCTISS--PRQWIVDSGASRHICCHASAF 355
                +  L + PSS+ I+  P + G   ++  + +S    +WI+DSGAS H+ C  S F
Sbjct: 132 -----LSLLQNQPSSNCIESNPIVNGLLLSIRPSFNSIPSTKWILDSGASTHVACSLSLF 186

Query: 356 SSLHPIVASTVTLPNNT 406
            +   I    VTLPN +
Sbjct: 187 KTYKIIKNRHVTLPNQS 203


>ref|XP_009109940.1| PREDICTED: uncharacterized protein LOC103835509 [Brassica rapa]
          Length = 944

 Score =  119 bits (297), Expect(3) = 2e-58
 Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRS 1048
            GP+A  +  G  YFLT+VDDC+R TW++L K KSDV+T+ P+F + +        KA RS
Sbjct: 653  GPFAQESIEGYKYFLTIVDDCSRVTWIHLLKRKSDVITLFPEFLQRVYTQYNVRVKAIRS 712

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F +    +G++H FSC  TP+QNSVVERKHQHLLNV
Sbjct: 713  DNAPELRFAELIKTHGMIHYFSCAYTPEQNSVVERKHQHLLNV 755



 Score =  116 bits (291), Expect(3) = 2e-58
 Identities = 71/168 (42%), Positives = 90/168 (53%), Gaps = 3/168 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LPN T I     G V LS  L L + L +P F FNL+SVS L   S     F P S  
Sbjct: 485 VSLPNGTRIPILHTGTVALSDSLILYDVLHVPSFFFNLVSVSALLRSSQCSAHFFPTSCY 544

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVN-SVTHSSPAQLWHSRLGHLSWKRLNLLQ 755
           IQ       IGKG+   ++YILD  P  IS   + + S+   LWH RLGH S  +L +L 
Sbjct: 545 IQEFSQGLTIGKGSLKHNLYILDLIPQDISAAFTGSLSADGMLWHQRLGHPSPAKLQVLS 604

Query: 756 HSLKLGQ--LHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
             L + +  + S   C +CPLAKQ+RLSF  NN+L   PF   H DIW
Sbjct: 605 TELSIPRCIIPSHSTCTVCPLAKQKRLSFPFNNNLSLKPFDLHHLDIW 652



 Score = 40.8 bits (94), Expect(3) = 2e-58
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 302 WIVDSGASRHICCHASAFSSLHPIVASTVTLPNNT 406
           WIVDSGA+ H+C   + F  + P    TV+LPN T
Sbjct: 457 WIVDSGATSHVCSDRAMFKEVFPASDLTVSLPNGT 491


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  115 bits (287), Expect(3) = 1e-57
 Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRS 1048
            GP++     G  YFLT+VDD +R TW+YL K KS+VLTV P F + +        KA RS
Sbjct: 623  GPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRS 682

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL FT F+A+ G++   SC ETP+QNSVVERKHQH+LNV
Sbjct: 683  DNAPELKFTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNV 725



 Score =  114 bits (285), Expect(3) = 1e-57
 Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LP   T+     G + L+  + LKN LF+P+F  NL+S+S LT   G  V F   S  
Sbjct: 459 VNLPTGPTVKISGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCE 518

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPAQLWHSRLGHLSWKRLNLLQH 758
           IQ +    ++G+G R  ++Y+LD    +ISVN+V   S   +WH RLGH S +RL+ +  
Sbjct: 519 IQDLIKGRMLGQGRRVANLYLLDVGDQSISVNAVVDIS---MWHRRLGHASLQRLDAISD 575

Query: 759 SLKLGQLHS--SDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           SL   +  +  SD C++C LAKQR+LSF ++N +    F  +H D+W
Sbjct: 576 SLGTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVW 622



 Score = 44.7 bits (104), Expect(3) = 1e-57
 Identities = 45/158 (28%), Positives = 60/158 (37%), Gaps = 22/158 (13%)
 Frame = +2

Query: 2   CFKLHGYPPGYKT--------------------SSEANTSR*LHQXXXXXXXXXXXQFHR 121
           C+K HG+PPG+                      SSE NTS                Q  +
Sbjct: 322 CYKKHGFPPGFTPKGKAGEKLQKPKPLAANVAESSEVNTS-----LESMVGNLSKEQLQQ 376

Query: 122 YAFHQCS*YHSTPIST--THDILLTSHMGALSSNPSSSAIDPKPCLAGTYYTLSCTISSP 295
           +     S   +TP ST  T     + ++G   S  + S I     L    +TLS      
Sbjct: 377 FIAMFSSQLQNTPPSTYATASTSQSDNLGICFSPSTYSFIG---ILTVARHTLSSAT--- 430

Query: 296 RQWIVDSGASRHICCHASAFSSLHPIVASTVTLPNNTT 409
             W++DSGA+ H+    S FSSL   V S V LP   T
Sbjct: 431 --WVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPT 466


>ref|XP_013594438.1| PREDICTED: uncharacterized protein LOC106302482 [Brassica oleracea
            var. oleracea]
          Length = 977

 Score =  119 bits (299), Expect(3) = 3e-57
 Identities = 57/103 (55%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRS 1048
            GP+A  +  G  YFLT+VDDC+R TW++L K KSDV+T+ P+F + +        KA RS
Sbjct: 653  GPFAQESIEGYKYFLTIVDDCSRVTWIHLLKRKSDVITLFPEFLQRVYTQYNVRVKAIRS 712

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F      NG++H FSC  TP+QNSVVERKHQHLLNV
Sbjct: 713  DNAPELRFAKLIKTNGMIHYFSCAYTPEQNSVVERKHQHLLNV 755



 Score =  114 bits (286), Expect(3) = 3e-57
 Identities = 69/168 (41%), Positives = 90/168 (53%), Gaps = 3/168 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LP  T I     G V LS  L L + L +P F FNL+SVS L   +     F P S  
Sbjct: 485 VSLPKGTRIPILHTGTVALSDSLILYDVLHVPSFFFNLVSVSALLRSNQCSAHFFPTSCY 544

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVN-SVTHSSPAQLWHSRLGHLSWKRLNLLQ 755
           IQ       IGKG+   ++YILD  P  IS   + + S+   LWH RLGH S  +L +L 
Sbjct: 545 IQEFSQGLTIGKGSLKHNLYILDLIPQDISAAFTGSLSADGMLWHQRLGHPSPAKLQVLS 604

Query: 756 HSLKLGQ--LHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
             L + +  + S   C +CPLAKQ+RLSF  NN+L   PF  +H DIW
Sbjct: 605 TELSIPRCIIPSHSTCTVCPLAKQKRLSFPFNNNLSLKPFDLLHLDIW 652



 Score = 38.1 bits (87), Expect(3) = 3e-57
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +2

Query: 302 WIVDSGASRHICCHASAFSSLHPIVASTVTLPNNT 406
           WIVDSGA+ H+C   + F  + P    TV+LP  T
Sbjct: 457 WIVDSGATSHVCSDRAMFREVFPASDLTVSLPKGT 491


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score =  114 bits (285), Expect(3) = 6e-56
 Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 10/175 (5%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LPN  T+  +  G + L+  L+L N LF+P+F FNLLSVSVLT      V+F     +
Sbjct: 449 VRLPNGHTVKIEGTGFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECM 508

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSS-------PAQLWHSRLGHLSWK 737
           IQ +  + ++GKG++ G++YIL+     + V+S    S        +++WH RLGH S+ 
Sbjct: 509 IQALTKELMLGKGSQVGNLYILNLDKSLVDVSSFPGKSVCSSVKNESEMWHKRLGHPSFA 568

Query: 738 RLNLLQHSLKLGQL---HSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           +++ L   L L +      S  C++C L+KQ+ L F S NH+    F  VH D W
Sbjct: 569 KIDTLSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHIREKAFELVHIDTW 623



 Score =  110 bits (275), Expect(3) = 6e-56
 Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMIK--------AFRS 1048
            GP++        YFLT+VDD +R TW+YL K KSDVLTV P F KM++        + RS
Sbjct: 624  GPFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRS 683

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL F + FA+ G+     C ETP+QN VVERKHQHLLNV
Sbjct: 684  DNAHELKFNELFAKEGIKADHPCPETPEQNFVVERKHQHLLNV 726



 Score = 43.5 bits (101), Expect(3) = 6e-56
 Identities = 43/173 (24%), Positives = 67/173 (38%), Gaps = 37/173 (21%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSE---------ANTSR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHS 154
           C+K+HGYPPG+  + E         A+T +   Q                   Q   Y S
Sbjct: 284 CYKVHGYPPGHPRAKENTYVGSTNLASTDQIETQAPPTMSATGHETMSNDHIQQLISYLS 343

Query: 155 TPISTTHDILLTSHMGALSSNP-----------SSSAIDPKPCLA---GTYYTL------ 274
           T + +           A SSNP            +S+ +P P ++   GT+++L      
Sbjct: 344 TKLQSPSITSCFDKAIASSSNPVPSISQITDKAIASSSNPVPSISQITGTFFSLYDSTYY 403

Query: 275 -SCTISSP-------RQWIVDSGASRHICCHASAFSSLHPIVASTVTLPNNTT 409
              T S P       R W++DSGAS H+    + + +   +  + V LPN  T
Sbjct: 404 EMLTSSIPIETELSLRAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHT 456


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  118 bits (295), Expect(3) = 7e-56
 Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LP    +     G V ++  + L+N LF+P+F  NL+S+S LTT  G  V F P+   
Sbjct: 470 VNLPTGPNVRISGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQ 529

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPAQLWHSRLGHLSWKRLNLLQH 758
           IQ +     +G+G R G++Y+LD+  P ISVN+V   S   +WH RLGH S+ RL+ L  
Sbjct: 530 IQDLTKGLTLGEGKRIGNLYVLDTQSPAISVNAVVDVS---VWHKRLGHPSFSRLDSLSE 586

Query: 759 SLKLGQLHS--SDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
            L   +  +  S  C++C LAKQ++LSF S N++  + F  +H D+W
Sbjct: 587 VLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVW 633



 Score =  116 bits (290), Expect(3) = 7e-56
 Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRS 1048
            GP++     G  YFLT+VDD +R TW+YL K+KSDVLTV P F  ++        K+ RS
Sbjct: 634  GPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRS 693

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA+EL FT+F+   G++   SC ETP+QNSVVERKHQH+LNV
Sbjct: 694  DNAKELAFTEFYKAKGIVSFHSCPETPEQNSVVERKHQHILNV 736



 Score = 33.5 bits (75), Expect(3) = 7e-56
 Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 17/149 (11%)
 Frame = +2

Query: 2   CFKLHGYPPGY----KTSSEANTSR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHSTPIST 169
           C+K HG+PPG+    K+S +    + +             Q    A +         I+ 
Sbjct: 326 CYKKHGFPPGFTPKGKSSDKPPKPQAVAAQVTLSPDKMTGQLETLAGNFSPDQIQNLIAL 385

Query: 170 THDIL---LTSHMGALSSNPSSSAIDPKP----------CLAGTYYTLSCTISSPRQWIV 310
               L   + S   A S + +SS+    P          C  G       ++SS   W++
Sbjct: 386 FSSQLQPQIVSPQTASSQHEASSSQSVAPSGILFSPSTYCFIGILAVSHNSLSSDT-WVI 444

Query: 311 DSGASRHICCHASAFSSLHPIVASTVTLP 397
           DSGA+ H+      F +L   + S V LP
Sbjct: 445 DSGATHHVSHDRKLFQTLDTSIVSFVNLP 473


>ref|XP_010542220.1| PREDICTED: uncharacterized protein LOC104815505 isoform X1 [Tarenaya
            hassleriana] gi|729347330|ref|XP_010542221.1| PREDICTED:
            uncharacterized protein LOC104815505 isoform X2 [Tarenaya
            hassleriana]
          Length = 751

 Score =  108 bits (271), Expect(3) = 1e-55
 Identities = 57/103 (55%), Positives = 65/103 (63%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLT--------VIPQFFKMIKAFRS 1048
            GP+    Y G  YF TLVDD +R TWVYL  +KSDVL+        V  QF   +K  RS
Sbjct: 624  GPFHVETYDGYKYFFTLVDDFSRLTWVYLLHSKSDVLSKFSEFLAYVQTQFQTTVKQIRS 683

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL FT      G+ HQFSC  TPQQNSVVERKH+H+LNV
Sbjct: 684  DNAPELAFTKLLQAKGIHHQFSCPYTPQQNSVVERKHRHILNV 726



 Score =  108 bits (269), Expect(3) = 1e-55
 Identities = 72/178 (40%), Positives = 94/178 (52%), Gaps = 13/178 (7%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ITLPN   +S  F+G V LS  +TL + L++P F FNLL VS LT  + L V F   S+L
Sbjct: 450 ITLPNGDAMSVSFSGSVILSEFITLTSVLYVPCFRFNLLRVSALTQNTSLTVCFSHDSYL 509

Query: 579 IQGIHNQTLIGKGNRTGDVYIL-------DSTPPTISVNSVTHSSPAQLWHSRLGHLSWK 737
           IQ       IGKG+R+ ++YI+        S  P     +V+ SS   LWH RLGH S  
Sbjct: 510 IQDPTRGLTIGKGSRSNNLYIMAMQGASTASYVPASLCTAVSVSSD-DLWHLRLGHPSTY 568

Query: 738 RL------NLLQHSLKLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           R+      +  + S+  G  H    C ICPLAKQ RLSF    H  +  F  +H D+W
Sbjct: 569 RIQGSAASSQPKFSVSPGFYHG---CNICPLAKQPRLSFPFGGHRCSASFDVIHLDVW 623



 Score = 50.4 bits (119), Expect(3) = 1e-55
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +2

Query: 161 ISTTHDILLTSHMGALSSNPSSSAIDPKPCLAGT---YYTLSCTISSPRQWIVDSGASRH 331
           IS+T D  LT+      S P+S      P +      Y++       P  WI+D+GAS H
Sbjct: 378 ISST-DSALTAPTPTAPSAPTSGIFPSLPVIFSALEPYFSFP-----PSVWILDTGASSH 431

Query: 332 ICCHASAFSSLHPIVASTVTLPN 400
           ICC +  FS LH I   T+TLPN
Sbjct: 432 ICCDSRLFSDLHCISPITITLPN 454


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  119 bits (298), Expect(3) = 1e-55
 Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFF--------KMIKAFRS 1048
            GP++  +  G  +FLT+VDD +R TWVY+ KNKS+V   IP FF        K +KA RS
Sbjct: 479  GPFSVGSVEGYKFFLTIVDDYSRVTWVYMLKNKSEVQKYIPDFFAFVKKQFGKEVKAIRS 538

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA ELF ++F+   GV+H  SCVETPQQNSVVERKHQH+LNV
Sbjct: 539  DNAPELFLSNFYHSLGVIHYRSCVETPQQNSVVERKHQHILNV 581



 Score =  112 bits (279), Expect(3) = 1e-55
 Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           +TLP   T+     G V LS  + L N LF+P F +NLLSVS  T    L + F P + +
Sbjct: 309 VTLPTGITVPIDRVGSVILSKDVKLLNVLFVPTFRYNLLSVSAFTDTLSLSMVFTPDACI 368

Query: 579 IQGIHNQTLIGKGNRTGDVYILD-----STPPTISVNSVTHSSPAQLWHSRLGHLSWKRL 743
           IQ      +IGKG+R G +Y LD     +    ++ + +  S+   LWHSRLGH S+ RL
Sbjct: 369 IQEPSRGKMIGKGSRKGQLYQLDFDSFVADKAFVAASRIPTSNILSLWHSRLGHPSFSRL 428

Query: 744 NLLQHSLKLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
             LQ  L          C +CPLAKQR L + S N   ++ F  +H DIW
Sbjct: 429 KGLQSVLDFDSSFDLTPCNVCPLAKQRCLPYISLNKRCSSTFDLLHLDIW 478



 Score = 35.8 bits (81), Expect(3) = 1e-55
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 302 WIVDSGASRHICCHASAFSSLHPIVASTVTLPNNTT 409
           WI+DSGA+ H+C   S F S   +    VTLP   T
Sbjct: 281 WIIDSGATHHVCNDISLFDSSIDVQNVRVTLPTGIT 316


>gb|KYP37322.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 448

 Score =  127 bits (319), Expect(3) = 2e-54
 Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFF--------KMIKAFRS 1048
            GP+    Y G  YFLTLV+D +RFTW++L K+KSD + VIPQF         K IK FRS
Sbjct: 320  GPFREHTYDGFKYFLTLVEDKSRFTWIFLLKHKSDCVVVIPQFISYIETQFNKTIKTFRS 379

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA+EL F D F++ G++HQ+SCVE PQQNSVVERKH H+LN+
Sbjct: 380  DNAKELAFNDLFSKKGIIHQYSCVERPQQNSVVERKHLHILNI 422



 Score = 88.6 bits (218), Expect(3) = 2e-54
 Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LPN+T +     G + L+  + L N LF+P F FNLLS+  L   +    T    SF+
Sbjct: 153 VMLPNSTKVKIVGIGSIHLNHDIHLHNVLFIPSFRFNLLSLLKLINENQFQFTMQSNSFV 212

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPAQ--LWHSRLGHLSWKRLNLL 752
           +Q +     IG   +   +   D      S+N+  + +     +WH RLGH+     NL+
Sbjct: 213 LQDLTTMRRIGTAKQDQGLLFFDFPMSNFSLNTTDYCNLVSYDIWHKRLGHIPINVYNLI 272

Query: 753 QHSLKLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
                L        C  C L+KQ RL F + NH     F  +H DIW
Sbjct: 273 ASKTVLSSADPHFHCSTCQLSKQNRLPFPNPNHFSPNLFDLLHADIW 319



 Score = 47.4 bits (111), Expect(3) = 2e-54
 Identities = 33/135 (24%), Positives = 58/135 (42%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEANTSR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHSTPISTTHDI 181
           C+KL GYPP Y + ++      +H              ++      +         T+ I
Sbjct: 40  CYKLVGYPPNYFSKNKQ-----VHVANQVLDNPESSDQNKSDILTPAQCQQLINFLTNQI 94

Query: 182 LLTSHMGALSSNPSSSAIDPKPCLAGTYYTLSCTISSPRQWIVDSGASRHICCHASAFSS 361
            L +   A+ +N S   ++    +  ++Y          +W++DSGA+ HICCH + + S
Sbjct: 95  QLNNPAEAVPTNVSGICMNTSLLMHHSHY----------RWVIDSGATSHICCHRNMYHS 144

Query: 362 LHPIVASTVTLPNNT 406
              +  S V LPN+T
Sbjct: 145 YTSLSDSYVMLPNST 159


>gb|KYP69518.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 731

 Score =  125 bits (313), Expect(3) = 5e-54
 Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKM--------IKAFRS 1048
            GP+    Y G  YFLTLVDD +RFTW+Y+ +NKSD +  IPQ F          IK+FRS
Sbjct: 207  GPFKQPTYDGFRYFLTLVDDKSRFTWIYMLQNKSDCIKNIPQIFAYVENQFQTKIKSFRS 266

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DN REL F DFF + GVLHQF CVE P+QNSVVERKH H+LN+
Sbjct: 267  DNVRELHFKDFFLEKGVLHQFLCVERPKQNSVVERKHLHILNI 309



 Score = 90.9 bits (224), Expect(3) = 5e-54
 Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LPN+T ++ +  G + ++  + L N L++P F FNLLS+  L   +    T    SFL
Sbjct: 40  VSLPNSTKVNVEGIGSIKINDDIFLHNVLYIPMFRFNLLSLLTLINNNPFRFTMESNSFL 99

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPA--QLWHSRLGHLSWKRLNLL 752
           +Q +     IG   +   + + +      + + +++ +    + WH RLGH+      L+
Sbjct: 100 LQDLKTLRTIGTTKQQQGLLVFEFPKRNFNSDCISNCNSVTYETWHKRLGHIPISVYKLI 159

Query: 753 QHSLKLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
            + +KL  + S+  C  C +AKQ RL F + N    + F  +H DIW
Sbjct: 160 ANKIKLSSIDSTYHCSTCNIAKQNRLPFPNPNKFSPSCFDLIHADIW 206



 Score = 45.8 bits (107), Expect(3) = 5e-54
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +2

Query: 302 WIVDSGASRHICCHASAFSSLHPIVASTVTLPNNT 406
           WI+DSGA+ HICC    ++S  PI  S V+LPN+T
Sbjct: 12  WIIDSGATSHICCSKQLYNSYTPIHNSDVSLPNST 46


>gb|KYP41111.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 476

 Score =  125 bits (313), Expect(3) = 5e-54
 Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKM--------IKAFRS 1048
            GP+    Y G  YFLTLVDD +RFTW+Y+ +NKSD +  IPQ F          IK+FRS
Sbjct: 216  GPFKQPTYDGFRYFLTLVDDKSRFTWIYMLQNKSDCIKNIPQIFAYVENQFQTKIKSFRS 275

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DN REL F DFF + GVLHQF CVE P+QNSVVERKH H+LN+
Sbjct: 276  DNVRELHFKDFFLEKGVLHQFLCVERPKQNSVVERKHLHILNI 318



 Score = 90.9 bits (224), Expect(3) = 5e-54
 Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           ++LPN+T ++ +  G + ++  + L N L++P F FNLLS+  L   +    T    SFL
Sbjct: 49  VSLPNSTKVNVEGIGSIKINDDIFLHNVLYIPMFRFNLLSLLTLINNNPFRFTMESNSFL 108

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPA--QLWHSRLGHLSWKRLNLL 752
           +Q +     IG   +   + + +      + + +++ +    + WH RLGH+      L+
Sbjct: 109 LQDLKTLRTIGTTKQQQGLLVFEFPKRNFNSDCISNCNSVTYETWHKRLGHIPISVYKLI 168

Query: 753 QHSLKLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
            + +KL  + S+  C  C +AKQ RL F + N    + F  +H DIW
Sbjct: 169 ANKIKLSSIDSTYHCSTCNIAKQNRLPFPNPNKFSPSCFDLIHADIW 215



 Score = 45.8 bits (107), Expect(3) = 5e-54
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +2

Query: 302 WIVDSGASRHICCHASAFSSLHPIVASTVTLPNNT 406
           WI+DSGA+ HICC    ++S  PI  S V+LPN+T
Sbjct: 21  WIIDSGATSHICCSKQLYNSYTPIHNSDVSLPNST 55


>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
           rvp.hmm, score: 11.80) [Arabidopsis thaliana]
          Length = 1244

 Score =  114 bits (286), Expect(3) = 1e-53
 Identities = 62/159 (38%), Positives = 97/159 (61%), Gaps = 4/159 (2%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LP  + +     G V ++  + L+N LFLP+F  NL+S+S LT+  G  V F P+   
Sbjct: 446 VNLPTGSRVKISGVGSVQINENILLRNVLFLPEFRLNLISISSLTSDIGSRVIFDPSCCE 505

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPP--TISVNSVTHSSPAQLWHSRLGHLSWKRLNLL 752
           IQ +     IG+G R G++Y+LD+TPP  ++SVN+V   S   LWH R+GH ++ RL+ +
Sbjct: 506 IQDLTKDLRIGRGRRIGNLYVLDTTPPLDSVSVNAVVDVS---LWHMRMGHPAYSRLDAI 562

Query: 753 QHSLKLGQLHS--SDVCYICPLAKQRRLSFHSNNHLFAT 863
              L+  +  +  S  C+IC LAKQ++LSF S+N++  T
Sbjct: 563 SDILRTTKHKNKGSAYCHICHLAKQKKLSFQSSNNILET 601



 Score =  107 bits (266), Expect(3) = 1e-53
 Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 8/94 (8%)
 Frame = +2

Query: 920  GQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRSDNARELFFT 1075
            G  YFLT+VDD +R TWVYL K KS+VL+V P F   +        KA RSDNA+EL FT
Sbjct: 604  GFKYFLTIVDDHSRATWVYLLKTKSEVLSVFPAFVTRVENQYNVKVKAVRSDNAQELKFT 663

Query: 1076 DFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            +F+   G++   SC ETP+QNSVVERKHQH+LNV
Sbjct: 664  EFYKAKGIVSYHSCPETPEQNSVVERKHQHILNV 697



 Score = 38.9 bits (89), Expect(3) = 1e-53
 Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 16/151 (10%)
 Frame = +2

Query: 2   CFKLHGYPPGYKTSSEANTSR*LHQXXXXXXXXXXXQFHRYAFHQCS*YHSTPISTTHDI 181
           C+K HGYPPG+K       ++   Q                A       + +     + I
Sbjct: 306 CYKKHGYPPGFKGKLPEKGTK--PQPVAAQVSLLPPMVPTQATLDGLLGNLSNDQLQNFI 363

Query: 182 LLTSHMGALSSNPSSSAIDPKPCLA-----------GTYY-----TLSCTISSPRQWIVD 313
            L S    L S P++S+ D     +            TYY      +S    S   W++D
Sbjct: 364 ALFSSQ--LKSQPTASSSDAGISRSPIDYTGISFSNSTYYFVGILNVSQHTLSTETWVID 421

Query: 314 SGASRHICCHASAFSSLHPIVASTVTLPNNT 406
           SGA+ H+C   S F SL   V S V LP  +
Sbjct: 422 SGATHHVCHDKSLFVSLDHSVVSYVNLPTGS 452


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score =  112 bits (281), Expect(3) = 3e-53
 Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
 Frame = +3

Query: 399 ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
           + LPN   +     G V L+  +TL N L++P+F  NLLS+S LT+  G  V F  +S  
Sbjct: 419 VNLPNGMIVKISGVGIVQLNEHITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCA 478

Query: 579 IQGIHNQTLIGKGNRTGDVYILDSTPPTISVNSVTHSSPAQLWHSRLGHLSWKRLNLLQH 758
           IQ       IG+G R  ++Y+LD     + +N+V   S   LWH RLGH S+ RL+ +  
Sbjct: 479 IQDPTKGWTIGQGRRVANLYVLDVKSSPMKINAVVDIS---LWHKRLGHPSYTRLDKISE 535

Query: 759 SL------KLGQLHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
           +L        G  H    C++C LAKQ++LS+ S NH+    F  +H D+W
Sbjct: 536 ALGTTKHKNKGDAH----CHVCHLAKQKKLSYSSQNHICTASFQLLHVDVW 582



 Score =  104 bits (259), Expect(3) = 3e-53
 Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRS 1048
            GP++     G  YFLT+VDD +R TW+YL ++KSDVL + P F   I        K+ R 
Sbjct: 583  GPFSVETLEGYKYFLTIVDDHSRATWIYLLQSKSDVLHIFPTFVNQIETQYNTKIKSVRR 642

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL FT+ F + G++   SC ET +QNSV+ERKHQHLLNV
Sbjct: 643  DNAPELSFTELFKEKGIVSYHSCPETLEQNSVLERKHQHLLNV 685



 Score = 42.0 bits (97), Expect(3) = 3e-53
 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 17/150 (11%)
 Frame = +2

Query: 2   CFKLHGYPPG----YKTSSEANTSR*LHQXXXXXXXXXXXQFH----------RYAFHQC 139
           C+K HG+PPG    YK+ S  +  +   Q                         ++  Q 
Sbjct: 274 CYKKHGFPPGFVSKYKSQSSGDRLQKPKQVAAQVSFSPPNSGQSPMTMDHLVGNHSKEQL 333

Query: 140 S*YHSTPISTTHDILLTSHMGALSSNP---SSSAIDPKPCLAGTYYTLSCTISSPRQWIV 310
             + +   S   ++ + S+  + S  P   S  + +P   +     T+S    +   WI+
Sbjct: 334 QQFIALFSSQLPNVTMGSNEASSSKQPMDNSGISFNPTTLVFIGLLTVSRHTLANETWII 393

Query: 311 DSGASRHICCHASAFSSLHPIVASTVTLPN 400
           DSGA+ H+C   S ++S+     S V LPN
Sbjct: 394 DSGATHHVCHDRSMYTSIDITTTSNVNLPN 423


>ref|XP_010495376.1| PREDICTED: uncharacterized protein LOC104772464 [Camelina sativa]
          Length = 1032

 Score =  116 bits (290), Expect(3) = 4e-53
 Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
 Frame = +2

Query: 893  GPYATLAYSGQSYFLTLVDDCTRFTWVYLPKNKSDVLTVIPQFFKMI--------KAFRS 1048
            GP+A  +  G  YFLT+VDD +R TWVYL  NKS+V    P F K++        K  R+
Sbjct: 672  GPFAVESVEGYKYFLTIVDDYSRVTWVYLLHNKSEVSVKFPLFLKLVETQYHTKVKKIRT 731

Query: 1049 DNARELFFTDFFAQNGVLHQFSCVETPQQNSVVERKHQHLLNV 1177
            DNA EL FTD   ++G++HQ+SC  TPQQNSVVERKHQHLLNV
Sbjct: 732  DNAPELAFTDLVNKHGIIHQYSCAYTPQQNSVVERKHQHLLNV 774



 Score =  106 bits (264), Expect(3) = 4e-53
 Identities = 67/169 (39%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
 Frame = +3

Query: 399  ITLPNNTTISAKFAGDVPLSPILTLKNFLFLPQFHFNLLSVSVLTTMSGLMVTFLPASFL 578
            ++LPN+  +     G V LS  L L N L +P F FN++SVS L         F P    
Sbjct: 503  VSLPNDARVDITHCGTVHLSSSLILHNVLHVPSFKFNIISVSSLLNHDQYSAHFFPFYCY 562

Query: 579  IQGIHNQTLIGKGNRTGDVYILDSTPP-TISVNSVTHSSPAQ--LWHSRLGHLSWKRLNL 749
            IQ      +IG+GN   ++YI  +  P + S +  T S      LWH RLGH S  +L  
Sbjct: 563  IQESIQGLMIGRGNLMHNLYIYSNDRPFSASQSHFTGSLKVDGLLWHQRLGHPSSDKLKH 622

Query: 750  LQHSLKLGQ-LHSSDVCYICPLAKQRRLSFHSNNHLFATPFAFVHGDIW 893
            +     L   L S   C +CPLAKQ+RLSF SN H   TPF  VH DIW
Sbjct: 623  IPGISSLSSSLLSESPCSVCPLAKQKRLSFESNGHRSTTPFDLVHLDIW 671



 Score = 36.2 bits (82), Expect(3) = 4e-53
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 302 WIVDSGASRHICCHASAFSSLHPIVASTVTLPNN 403
           WI+D+GA+ H+C   + F+    +   TV+LPN+
Sbjct: 475 WIIDTGATSHVCSDLALFNETTTVSGVTVSLPND 508