BLASTX nr result
ID: Rehmannia27_contig00039738
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00039738
(418 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 83 2e-27
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 68 2e-17
ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [E... 60 1e-16
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 70 2e-11
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 47 4e-10
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 47 5e-10
emb|CDP19325.1| unnamed protein product [Coffea canephora] 49 7e-10
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 49 7e-10
ref|XP_015070676.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 45 2e-09
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 45 3e-09
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 45 3e-09
gb|KVI06345.1| Nucleotide-binding, alpha-beta plait [Cynara card... 54 6e-06
>ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
Length = 1133
Score = 82.8 bits (203), Expect(2) = 2e-27
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
IKALSLS QRKLLF+GFY+SISPSF D+I RP+EP+NRV G G+VLLAG+M
Sbjct: 71 IKALSLSEQRKLLFKGFYISISPSFEDVIIRPVEPRNRVGYGGGMVLLAGVM 122
Score = 66.2 bits (160), Expect(2) = 2e-27
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 13 MTVTAMDIDMERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
MT+T MD M RPTLTVKVSNIPQ+AIAQELL+FLES LGKGT
Sbjct: 1 MTITNMD--MARPTLTVKVSNIPQTAIAQELLSFLESTLGKGT 41
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 67.8 bits (164), Expect(2) = 2e-17
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
I+ALSLSH RK LF+GFYLS++ S +II RP++P RV +G GLVL AGIM
Sbjct: 71 IEALSLSHHRKFLFKGFYLSVTHSLEEIIIRPVDPIYRVGDGGGLVLFAGIM 122
Score = 48.1 bits (113), Expect(2) = 2e-17
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 46 RPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
RPTLTVKV+NIP AIA++L FLES LGKGT
Sbjct: 10 RPTLTVKVTNIPPIAIAKDLQAFLESVLGKGT 41
>ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttata]
gi|604343689|gb|EYU42543.1| hypothetical protein
MIMGU_mgv1a000463mg [Erythranthe guttata]
Length = 1135
Score = 60.1 bits (144), Expect(2) = 1e-16
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
IKALSLS Q L+F+GF LSI PS D+I RP++P NRV N G +AG+M
Sbjct: 66 IKALSLSEQGNLIFKGFRLSILPSSEDVIIRPVDPTNRVGNCAGSGFVAGVM 117
Score = 52.8 bits (125), Expect(2) = 1e-16
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +1
Query: 34 IDMERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
+D RPTLTVKV NIPQ+ IA EL TFLES +GKGT
Sbjct: 1 MDTGRPTLTVKVQNIPQTIIAHELQTFLESAVGKGT 36
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 69.7 bits (169), Expect = 2e-11
Identities = 33/51 (64%), Positives = 42/51 (82%)
Frame = +2
Query: 266 KALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
+ALSLS +RKL+F+G YL +S SF DII RP++P+NR+EN GL LLAGIM
Sbjct: 37 EALSLSEERKLVFKGHYLCVSHSFEDIITRPVDPENRLENAAGLCLLAGIM 87
>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana
tomentosiformis]
Length = 1120
Score = 46.6 bits (109), Expect(2) = 4e-10
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
+++LSLS Q KL+F+G L ++ SF+DII RP+EP R + G +L G++
Sbjct: 67 LQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKG---ILHTGVL 115
Score = 44.3 bits (103), Expect(2) = 4e-10
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +1
Query: 43 ERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
+R T TV+VSNIPQ+AIA++L F ES++GKG+
Sbjct: 5 KRITATVRVSNIPQTAIAKQLFDFFESSIGKGS 37
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum tuberosum]
Length = 1119
Score = 47.0 bits (110), Expect(2) = 5e-10
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENG 388
+ LSLS Q LLF+G LS+ SF+DII RP+EPK R ++G
Sbjct: 67 LHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDG 108
Score = 43.5 bits (101), Expect(2) = 5e-10
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 43 ERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
+R T TV+VSNIPQSAIA++L F +S +GKG+
Sbjct: 5 KRATATVRVSNIPQSAIAKDLFDFFDSLIGKGS 37
>emb|CDP19325.1| unnamed protein product [Coffea canephora]
Length = 1120
Score = 48.9 bits (115), Expect(2) = 7e-10
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
IK LSLS + KL F+G +L +S S +++IFRP++ K R++NG VL GI+
Sbjct: 67 IKCLSLSEKGKLFFKGSHLRLSHSIDEVIFRPVDSKLRIKNG---VLRTGIL 115
Score = 41.2 bits (95), Expect(2) = 7e-10
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 43 ERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
ER T TV+V NIPQSA A++LL F +S +G+ T
Sbjct: 5 ERTTATVRVQNIPQSANAKDLLAFFQSTIGEDT 37
>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
Length = 1120
Score = 48.5 bits (114), Expect(2) = 7e-10
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
++ALSLS Q KL+F+G L ++ SF+DII RP+EP R + G +L G++
Sbjct: 67 LQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRFQKG---ILHTGVL 115
Score = 41.6 bits (96), Expect(2) = 7e-10
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 43 ERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
+R T TV+VSNIPQ+AIA++L F ES++ KG+
Sbjct: 5 KRVTATVRVSNIPQTAIAKQLFDFFESSIRKGS 37
>ref|XP_015070676.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum pennellii]
Length = 1123
Score = 44.7 bits (104), Expect(2) = 2e-09
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENG 388
+ LSL+ Q LLF+G LS+ SF+DII RP+EPK R + G
Sbjct: 67 LHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAG 108
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 43 ERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
+R T TV+VSNIPQSAIA++L F +S +GKG+
Sbjct: 5 KRATATVRVSNIPQSAIAKDLFNFFDSLIGKGS 37
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 44.7 bits (104), Expect(2) = 3e-09
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +1
Query: 43 ERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
+R T TV+VSNIPQ+AIA++L F ES++GKG+
Sbjct: 5 KRVTATVRVSNIPQTAIAKQLFDFFESSIGKGS 37
Score = 43.1 bits (100), Expect(2) = 3e-09
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENGEGLVLLAGIM 418
+++LSLS Q KL+F+G L ++ SF+DII RP+E R + G +L GI+
Sbjct: 67 LQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKG---ILHTGIL 115
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
Length = 1119
Score = 44.7 bits (104), Expect(2) = 3e-09
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 263 IKALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENG 388
+ LSL+ Q LLF+G LS+ SF+DII RP+EPK R + G
Sbjct: 67 LHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAG 108
Score = 43.1 bits (100), Expect(2) = 3e-09
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 43 ERPTLTVKVSNIPQSAIAQELLTFLESNLGKGT 141
+R T TV+VSNIPQSAIA++L F +S +GKG+
Sbjct: 5 KRATATVRVSNIPQSAIAKDLSNFFDSLIGKGS 37
>gb|KVI06345.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 1063
Score = 54.3 bits (129), Expect = 6e-06
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +2
Query: 266 KALSLSHQRKLLFRGFYLSISPSFNDIIFRPLEPKNRVENG 388
KA+SLS Q L F+GF LS+S S +D+IFRP++P NRVE+G
Sbjct: 68 KAISLSRQGLLCFKGFNLSLSHSLDDVIFRPVQPHNRVEHG 108