BLASTX nr result

ID: Rehmannia27_contig00034678 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00034678
         (812 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011070743.1| PREDICTED: nuclear poly(A) polymerase 1 isof...    67   3e-09
ref|XP_011070741.1| PREDICTED: nuclear poly(A) polymerase 1 isof...    67   3e-09
gb|EYU30023.1| hypothetical protein MIMGU_mgv1a025878mg, partial...    66   1e-08
ref|XP_012846147.1| PREDICTED: nuclear poly(A) polymerase 1 [Ery...    66   1e-08
ref|XP_015076328.1| PREDICTED: nuclear poly(A) polymerase 1-like...    65   2e-08
ref|XP_004238881.1| PREDICTED: poly(A) polymerase type 3 [Solanu...    65   2e-08
ref|XP_006344187.1| PREDICTED: nuclear poly(A) polymerase 1 [Sol...    65   2e-08
ref|XP_013683007.1| PREDICTED: nuclear poly(A) polymerase 1-like...    64   6e-08
ref|XP_002892977.1| nucleotidyltransferase family protein [Arabi...    63   1e-07
ref|XP_006416649.1| hypothetical protein EUTSA_v10006945mg [Eutr...    62   2e-07
ref|XP_009117634.1| PREDICTED: poly(A) polymerase type 3-like [B...    62   2e-07
emb|CDX81855.1| BnaC08g37460D [Brassica napus]                         62   2e-07
ref|XP_013604573.1| PREDICTED: nuclear poly(A) polymerase 1-like...    62   2e-07
ref|XP_013664593.1| PREDICTED: nuclear poly(A) polymerase 1-like...    62   2e-07
ref|XP_009110370.1| PREDICTED: poly(A) polymerase PAPalpha-like ...    62   2e-07
ref|XP_006416650.1| hypothetical protein EUTSA_v10006945mg [Eutr...    62   2e-07
ref|XP_013599491.1| PREDICTED: nuclear poly(A) polymerase 1 [Bra...    62   2e-07
ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana] gi|...    62   3e-07
ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana] gi|...    62   3e-07
ref|XP_010498178.1| PREDICTED: poly(A) polymerase-like [Camelina...    61   3e-07

>ref|XP_011070743.1| PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Sesamum
           indicum]
          Length = 694

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAAET 1
           G  +  AIEANKA+W  LFEPFAFFEAYKNYLQIDIAAET
Sbjct: 340 GNEICEAIEANKATWDALFEPFAFFEAYKNYLQIDIAAET 379


>ref|XP_011070741.1| PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Sesamum
           indicum] gi|747049394|ref|XP_011070742.1| PREDICTED:
           nuclear poly(A) polymerase 1 isoform X1 [Sesamum
           indicum]
          Length = 729

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAAET 1
           G  +  AIEANKA+W  LFEPFAFFEAYKNYLQIDIAAET
Sbjct: 340 GNEICEAIEANKATWDALFEPFAFFEAYKNYLQIDIAAET 379


>gb|EYU30023.1| hypothetical protein MIMGU_mgv1a025878mg, partial [Erythranthe
           guttata]
          Length = 638

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAAET 1
           G  +  AIEAN ASW +LFEPFAFFEAY+NYLQIDIAAET
Sbjct: 340 GKEICEAIEANNASWDSLFEPFAFFEAYRNYLQIDIAAET 379


>ref|XP_012846147.1| PREDICTED: nuclear poly(A) polymerase 1 [Erythranthe guttata]
          Length = 705

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAAET 1
           G  +  AIEAN ASW +LFEPFAFFEAY+NYLQIDIAAET
Sbjct: 340 GKEICEAIEANNASWDSLFEPFAFFEAYRNYLQIDIAAET 379


>ref|XP_015076328.1| PREDICTED: nuclear poly(A) polymerase 1-like [Solanum pennellii]
          Length = 682

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAAET 1
           G  +  AIEANKASWG+LFEPF FFEAYKNYL+IDIA E+
Sbjct: 330 GNEICEAIEANKASWGSLFEPFPFFEAYKNYLRIDIATES 369


>ref|XP_004238881.1| PREDICTED: poly(A) polymerase type 3 [Solanum lycopersicum]
          Length = 682

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAAET 1
           G  +  AIEANKASWG+LFEPF FFEAYKNYL+IDIA E+
Sbjct: 330 GNEICEAIEANKASWGSLFEPFPFFEAYKNYLRIDIATES 369


>ref|XP_006344187.1| PREDICTED: nuclear poly(A) polymerase 1 [Solanum tuberosum]
          Length = 695

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAAET 1
           G  +  AIEANKASWG+LFEPF FFEAYKNYL+IDIA E+
Sbjct: 330 GNEICEAIEANKASWGSLFEPFPFFEAYKNYLRIDIATES 369


>ref|XP_013683007.1| PREDICTED: nuclear poly(A) polymerase 1-like [Brassica napus]
           gi|674949568|emb|CDX83877.1| BnaC08g17680D [Brassica
           napus]
          Length = 712

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           G ++  A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 333 GKYICEAMEANKADWDTLFEPFAFFEAYKNYLQIDISA 370


>ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338819|gb|EFH69236.1|
           nucleotidyltransferase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 716

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           G  +  A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 336 GKEICEAMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373


>ref|XP_006416649.1| hypothetical protein EUTSA_v10006945mg [Eutrema salsugineum]
           gi|557094420|gb|ESQ35002.1| hypothetical protein
           EUTSA_v10006945mg [Eutrema salsugineum]
          Length = 702

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 342 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373


>ref|XP_009117634.1| PREDICTED: poly(A) polymerase type 3-like [Brassica rapa]
          Length = 710

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 342 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373


>emb|CDX81855.1| BnaC08g37460D [Brassica napus]
          Length = 710

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 342 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373


>ref|XP_013604573.1| PREDICTED: nuclear poly(A) polymerase 1-like [Brassica oleracea
           var. oleracea]
          Length = 711

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 342 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373


>ref|XP_013664593.1| PREDICTED: nuclear poly(A) polymerase 1-like [Brassica napus]
           gi|674911436|emb|CDY21725.1| BnaA09g44760D [Brassica
           napus]
          Length = 711

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 342 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373


>ref|XP_009110370.1| PREDICTED: poly(A) polymerase PAPalpha-like [Brassica rapa]
           gi|674936705|emb|CDX96740.1| BnaA08g22830D [Brassica
           napus]
          Length = 713

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 339 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 370


>ref|XP_006416650.1| hypothetical protein EUTSA_v10006945mg [Eutrema salsugineum]
           gi|557094421|gb|ESQ35003.1| hypothetical protein
           EUTSA_v10006945mg [Eutrema salsugineum]
          Length = 714

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 342 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373


>ref|XP_013599491.1| PREDICTED: nuclear poly(A) polymerase 1 [Brassica oleracea var.
           oleracea]
          Length = 716

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -3

Query: 102 AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           A+EANKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 343 AMEANKADWDTLFEPFAFFEAYKNYLQIDISA 374


>ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
           gi|332191537|gb|AEE29658.1| poly(A) polymerase 1
           [Arabidopsis thaliana]
          Length = 586

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           G  +  A+E+NKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 209 GNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISA 246


>ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
           gi|75264043|sp|Q9LMT2.1|PAPS1_ARATH RecName:
           Full=Nuclear poly(A) polymerase 1; Short=PAP(I);
           Short=Poly(A) polymerase I; AltName: Full=Polynucleotide
           adenylyltransferase 1
           gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity
           to nuclear poly(A) polymerase from Arabidopsis thaliana
           gb|AF255297 and contains a Nucleotidyltransferase
           PF|01909 domain. ESTs gb|AV536592, gb|AV553256,
           gb|AV561630, gb|AV532289 come from this gene
           [Arabidopsis thaliana] gi|29029092|gb|AAO64925.1|
           At1g17980 [Arabidopsis thaliana]
           gi|32527642|gb|AAP86214.1| poly(A) polymerase
           [Arabidopsis thaliana] gi|110743114|dbj|BAE99449.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332191538|gb|AEE29659.1| poly(A) polymerase 1
           [Arabidopsis thaliana]
          Length = 713

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           G  +  A+E+NKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 336 GNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISA 373


>ref|XP_010498178.1| PREDICTED: poly(A) polymerase-like [Camelina sativa]
          Length = 408

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = -3

Query: 120 GYHVW*AIEANKASWGTLFEPFAFFEAYKNYLQIDIAA 7
           G  +  A+E NKA W TLFEPFAFFEAYKNYLQIDI+A
Sbjct: 32  GKEICEAMETNKADWDTLFEPFAFFEAYKNYLQIDISA 69


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