BLASTX nr result

ID: Rehmannia27_contig00034478 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00034478
         (394 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011074214.1| PREDICTED: pentatricopeptide repeat-containi...    62   9e-09
ref|XP_011073371.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-07
ref|XP_012856418.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-07
gb|EYU21693.1| hypothetical protein MIMGU_mgv1a024440mg, partial...    56   9e-07

>ref|XP_011074214.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Sesamum indicum]
          Length = 476

 Score = 62.0 bits (149), Expect = 9e-09
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +2

Query: 2   GLVDMARNYDDEMLLKGLSAKPRAELQAKMDDEGS 106
           GLVDMAR YD+EMLLKGLSAKPRAELQ  MD EGS
Sbjct: 441 GLVDMARKYDEEMLLKGLSAKPRAELQTTMDTEGS 475


>ref|XP_011073371.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial [Sesamum indicum]
           gi|747054341|ref|XP_011073372.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial [Sesamum indicum]
           gi|747054343|ref|XP_011073374.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial [Sesamum indicum]
          Length = 478

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 2   GLVDMARNYDDEMLLKGLSAKPRAELQAKMDDEGSGD 112
           GLVDMAR YD+EML+KGLSAKP+AELQ  MD E S +
Sbjct: 441 GLVDMARKYDEEMLMKGLSAKPKAELQTIMDSEVSSN 477


>ref|XP_012856418.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial [Erythranthe guttata]
          Length = 486

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = +2

Query: 2   GLVDMARNYDDEMLLKGLSAKPRAELQAKMDDEGSGDG*FSNLSSY 139
           GLVD+AR YD+EML KG+SAKPRAELQ K DDE S      N+ SY
Sbjct: 440 GLVDIARRYDEEMLSKGISAKPRAELQKKTDDEVS-----QNVHSY 480


>gb|EYU21693.1| hypothetical protein MIMGU_mgv1a024440mg, partial [Erythranthe
           guttata]
          Length = 412

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   GLVDMARNYDDEMLLKGLSAKPRAELQAKMDDEGS 106
           GLVD+AR YD+EML KG+SAKPRAELQ K DDE S
Sbjct: 375 GLVDIARRYDEEMLSKGISAKPRAELQKKTDDEVS 409


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