BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00034255
         (414 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095094.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-46
ref|XP_012831789.1| PREDICTED: pentatricopeptide repeat-containi...   140   5e-37
ref|XP_015170040.1| PREDICTED: pentatricopeptide repeat-containi...    81   3e-15
ref|XP_015087296.1| PREDICTED: pentatricopeptide repeat-containi...    78   3e-14
ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containi...    77   4e-14
ref|XP_002309173.2| pentatricopeptide repeat-containing family p...    76   1e-13
ref|XP_011019040.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-13
ref|XP_007026524.1| Pentatricopeptide repeat superfamily protein...    75   2e-13
ref|XP_009797175.1| PREDICTED: pentatricopeptide repeat-containi...    74   5e-13
ref|XP_008363930.1| PREDICTED: pentatricopeptide repeat-containi...    74   7e-13
ref|XP_010091108.1| hypothetical protein L484_021993 [Morus nota...    73   1e-12
ref|XP_009373117.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    72   3e-12
gb|KVH90370.1| Pentatricopeptide repeat-containing protein [Cyna...    70   1e-11
gb|KDO63309.1| hypothetical protein CISIN_1g039177mg [Citrus sin...    70   2e-11
ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citr...    70   2e-11
ref|XP_010683568.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-10
ref|XP_011466430.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-10
ref|XP_010040006.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-10
ref|XP_012089729.1| PREDICTED: pentatricopeptide repeat-containi...    65   6e-10
ref|XP_008244810.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-09

>ref|XP_011095094.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Sesamum indicum]
          Length = 543

 Score =  166 bits (420), Expect = 2e-46
 Identities = 87/129 (67%), Positives = 100/129 (77%), Gaps = 2/129 (1%)
 Frame = -2

Query: 389 LAYCKRVIAAEKAHPWRQQQNIYANHPINYFFCNSTALFXXXXXXXXS--LHNYYIRKRR 216
           LA C  VI  E+A   ++QQ IYAN P +  FCNSTA F        S  LHNYYIRKRR
Sbjct: 5   LADCNLVIPTERA--CQRQQQIYANCPTSNLFCNSTASFSSSSSSRKSSSLHNYYIRKRR 62

Query: 215 KWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQSYHLLFK 36
           KWPIRPYKT+  Q FAF+LAKQSFK+SIRK+KTHLLSDLV+SF+AYEV+PTP+SYH LFK
Sbjct: 63  KWPIRPYKTERHQAFAFQLAKQSFKRSIRKSKTHLLSDLVSSFAAYEVDPTPESYHFLFK 122

Query: 35  ILIQKRPSN 9
           +LIQ RPSN
Sbjct: 123 VLIQNRPSN 131


>ref|XP_012831789.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Erythranthe guttata]
          Length = 481

 Score =  140 bits (353), Expect = 5e-37
 Identities = 76/132 (57%), Positives = 90/132 (68%)
 Frame = -2

Query: 404 MSRGILAYCKRVIAAEKAHPWRQQQNIYANHPINYFFCNSTALFXXXXXXXXSLHNYYIR 225
           M RG++A+CKR I     H WRQQ N       NY    ST+          SLHNYYIR
Sbjct: 1   MLRGVVAHCKRFIT----HQWRQQINP------NYSLFISTSTASFSSRKSSSLHNYYIR 50

Query: 224 KRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQSYHL 45
           KRRKWPI+P+ T   + FA +LAKQ FKQSIRK+K +LLSDL+ S  AYE+ PTPQSYHL
Sbjct: 51  KRRKWPIQPFTTHRCESFAVKLAKQLFKQSIRKSKINLLSDLIKSCVAYEIEPTPQSYHL 110

Query: 44  LFKILIQKRPSN 9
           LFKILIQ++PSN
Sbjct: 111 LFKILIQQKPSN 122


>ref|XP_015170040.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Solanum tuberosum]
          Length = 512

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
 Frame = -2

Query: 245 LHNYYIRKRRKWPIRPYKTQW-DQIFAFRLAKQSFKQSI--RKTKTHLLSDLVNSFSAYE 75
           + NY++RKRRKWP+ PYKT+W ++    +LA Q   +S   R  KTHLLS L++SFSAYE
Sbjct: 27  MDNYFLRKRRKWPLSPYKTKWQEETLTHQLAMQKLVESTSNRSPKTHLLSILIDSFSAYE 86

Query: 74  VNPTPQSYHLLFKILIQKRPS 12
            +P+P +Y+ + K  + K PS
Sbjct: 87  CDPSPNAYYFILK-TVTKNPS 106


>ref|XP_015087296.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Solanum pennellii]
          Length = 463

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
 Frame = -2

Query: 245 LHNYYIRKRRKWPIRPYKTQW-DQIFAFRLAKQSFKQSIRK--TKTHLLSDLVNSFSAYE 75
           ++NY++RKRRKWP+  YKT+W ++    +L+ Q   +S      KTHLLS LV+SFSAYE
Sbjct: 27  MNNYFLRKRRKWPLSLYKTKWQEEKLTHQLSMQKLVESTPNGSPKTHLLSILVDSFSAYE 86

Query: 74  VNPTPQSYHLLFKILIQ 24
            NPTP +Y+ + K L Q
Sbjct: 87  CNPTPNAYYFILKTLTQ 103


>ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Solanum lycopersicum]
          Length = 496

 Score = 77.4 bits (189), Expect = 4e-14
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
 Frame = -2

Query: 245 LHNYYIRKRRKWPIRPYKTQW-DQIFAFRLAKQSFKQSI--RKTKTHLLSDLVNSFSAYE 75
           ++NY++RKRRKWP+  YKT+W ++    +L+ Q   +S   R  KTHLLS L++SFSAYE
Sbjct: 27  MNNYFLRKRRKWPLSLYKTKWQEEKLTHQLSMQKLVESTPNRSPKTHLLSILLDSFSAYE 86

Query: 74  VNPTPQSYHLLFKILIQ 24
            +PTP +Y+ + K L Q
Sbjct: 87  CDPTPNAYYFILKTLTQ 103


>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335936|gb|EEE92696.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 490

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
 Frame = -2

Query: 239 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRK-------TKTHLLSDLVNSFSA 81
           ++++RK RKWP  PYK +W +IF  + A QS KQS  K        K HLLS L++SFS 
Sbjct: 11  SFFLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQESPNKPHLLSSLIHSFSI 70

Query: 80  YEVNPTPQSYHLLFKILIQ 24
           Y+V P P+++  +FK L++
Sbjct: 71  YDVEPAPKAFDFIFKTLVK 89


>ref|XP_011019040.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Populus euphratica]
           gi|743811542|ref|XP_011019042.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Populus euphratica]
          Length = 506

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
 Frame = -2

Query: 239 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKT-------KTHLLSDLVNSFSA 81
           ++++RK RKWP  PYK +W +IF  + A QS KQS  K        K HLLS L++SF  
Sbjct: 11  SFFLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQESPHKPHLLSSLIHSFGI 70

Query: 80  YEVNPTPQSYHLLFKILIQ 24
           Y+V PTP+++  +FK L++
Sbjct: 71  YDVEPTPKAFDFIFKTLVK 89


>ref|XP_007026524.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508715129|gb|EOY07026.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 542

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
 Frame = -2

Query: 239 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHL-----LSDLVNSFSAYE 75
           N ++RK R+WP   YKT+W+Q F  + A  SFKQ +   + +L     LS LV SFS Y 
Sbjct: 54  NLFLRKHRRWPHFAYKTKWNQTFTQKQAMLSFKQLVAVAQDNLPPPILLSTLVRSFSLYN 113

Query: 74  VNPTPQSYHLLFKILIQ 24
           V+PTPQ+YH L K LIQ
Sbjct: 114 VHPTPQAYHFLIKTLIQ 130


>ref|XP_009797175.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Nicotiana sylvestris]
          Length = 508

 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
 Frame = -2

Query: 242 HNYYIRKRRKWPIRPYKTQWDQ-IFAFRLAKQSFKQSIRKT--KTHLLSDLVNSFSAYEV 72
           +NYY+RK+RK P  PYKT+W +  F  +LA Q   +S  K+  KT+LLS L++SF+AY+ 
Sbjct: 35  NNYYLRKKRKCPFSPYKTKWQETFFTHQLAVQKLVESTHKSPKKTNLLSVLIDSFAAYKC 94

Query: 71  NPTPQSYHLLFKILIQKRPS 12
            PTP +Y L+ K L  K PS
Sbjct: 95  EPTPNAYFLILKTL-TKNPS 113


>ref|XP_008363930.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Malus domestica]
          Length = 491

 Score = 73.9 bits (180), Expect = 7e-13
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -2

Query: 236 YYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQ 57
           +++RK RKWP+ PY T+W QIF    A QS K+S+     HLL  L+ SF  Y V+PTP+
Sbjct: 13  FFLRKHRKWPVSPYNTRWQQIFNQNQAFQSLKKSL-PPPCHLLPTLIYSFKTYNVDPTPE 71

Query: 56  SYHLLFKIL 30
           +YH + K L
Sbjct: 72  AYHFVLKTL 80


>ref|XP_010091108.1| hypothetical protein L484_021993 [Morus notabilis]
           gi|587852268|gb|EXB42398.1| hypothetical protein
           L484_021993 [Morus notabilis]
          Length = 494

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 33/74 (44%), Positives = 50/74 (67%)
 Frame = -2

Query: 245 LHNYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNP 66
           L N ++RK R++PI PYKT+W + F    A Q+ K+   +    LLS L+NSF++Y+ NP
Sbjct: 8   LTNKFLRKHREFPISPYKTKWHETFNQTQALQTLKRHQNENPNRLLSLLLNSFNSYDCNP 67

Query: 65  TPQSYHLLFKILIQ 24
           TP++YH + K LI+
Sbjct: 68  TPEAYHFVLKTLIK 81


>ref|XP_009373117.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g38420, mitochondrial [Pyrus x
           bretschneideri]
          Length = 491

 Score = 72.0 bits (175), Expect = 3e-12
 Identities = 32/69 (46%), Positives = 43/69 (62%)
 Frame = -2

Query: 236 YYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQ 57
           +++RK RKWP+ PY T+W QIF    A QS K+S+     HLL  L+ SF  Y  +PTP+
Sbjct: 13  FFLRKHRKWPVSPYNTRWQQIFNQSQAFQSLKKSL-PAPCHLLPTLIYSFKTYNADPTPE 71

Query: 56  SYHLLFKIL 30
           +YH   K L
Sbjct: 72  AYHFFLKTL 80


>gb|KVH90370.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 510

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = -2

Query: 242 HNYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFK-QSIRKTKTHLLSDLVNSFSAYEVNP 66
           HNYY+RKRRKWP   YK++W +  + + A Q+ + Q+   +  +LLS LVNSF+ Y  +P
Sbjct: 31  HNYYLRKRRKWPHPVYKSRWHEKLSQQHAMQALRHQASSSSSINLLSSLVNSFALYNCDP 90

Query: 65  TPQSYHLLFKILIQKRPSN 9
           TP +Y    K LI+   S+
Sbjct: 91  TPTAYRFAIKTLIKTSQSH 109


>gb|KDO63309.1| hypothetical protein CISIN_1g039177mg [Citrus sinensis]
          Length = 453

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
 Frame = -2

Query: 239 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKT----------HLLSDLVNS 90
           N ++RK RKWP+ PYK +W Q    + AKQ+ KQS+    T          H+LS L++S
Sbjct: 11  NLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHS 70

Query: 89  FSAYEVNPTPQSYHLLFKILIQ 24
           FS Y   P P++YH + K L +
Sbjct: 71  FSIYNCEPPPEAYHFVIKTLAE 92


>ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citrus clementina]
           gi|985452616|ref|XP_015386666.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Citrus sinensis]
           gi|557531581|gb|ESR42764.1| hypothetical protein
           CICLE_v10013613mg [Citrus clementina]
          Length = 506

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
 Frame = -2

Query: 239 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKT----------HLLSDLVNS 90
           N ++RK RKWP+ PYK +W Q    + AKQ+ KQS+    T          H+LS L++S
Sbjct: 11  NLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHS 70

Query: 89  FSAYEVNPTPQSYHLLFKILIQ 24
           FS Y   P P++YH + K L +
Sbjct: 71  FSIYNCEPPPEAYHFVIKTLAE 92


>ref|XP_010683568.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial isoform X1 [Beta vulgaris subsp. vulgaris]
           gi|870854858|gb|KMT06606.1| hypothetical protein
           BVRB_7g157740 [Beta vulgaris subsp. vulgaris]
          Length = 509

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 16/89 (17%)
 Frame = -2

Query: 239 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIR----------------KTKTHLL 108
           N ++R+RRKW   PYKT+W  IF  + A Q+ K+S                  KT +HLL
Sbjct: 13  NLFLRRRRKWAHSPYKTRWHYIFTQQQALQTLKKSCLSSNQDSIIQQSTQNPPKTPSHLL 72

Query: 107 SDLVNSFSAYEVNPTPQSYHLLFKILIQK 21
           + L+NSF++Y+ +PT  +Y+ + K LIQK
Sbjct: 73  NCLINSFASYQCDPTLCAYNFVIKTLIQK 101


>ref|XP_011466430.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 491

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 27/71 (38%), Positives = 45/71 (63%)
 Frame = -2

Query: 236 YYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTKTHLLSDLVNSFSAYEVNPTPQ 57
           +++RK RKWP+ PY T+W ++F    A Q+ K S       LLS L++SF+ +  +PTP+
Sbjct: 13  FFVRKHRKWPVSPYNTKWHKLFNQHQALQTLKHSPLNPPQTLLSTLIHSFNTFNCDPTPE 72

Query: 56  SYHLLFKILIQ 24
           +Y+ + K L +
Sbjct: 73  AYNFVLKTLFK 83


>ref|XP_010040006.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Eucalyptus grandis]
           gi|629123834|gb|KCW88259.1| hypothetical protein
           EUGRSUZ_A00644 [Eucalyptus grandis]
           gi|629123835|gb|KCW88260.1| hypothetical protein
           EUGRSUZ_A00644 [Eucalyptus grandis]
          Length = 507

 Score = 65.9 bits (159), Expect = 5e-10
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 17/89 (19%)
 Frame = -2

Query: 239 NYYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIR-----------------KTKTHL 111
           N ++R+ R+WP+ PYKT+W Q F+   A ++ + ++R                  T+ +L
Sbjct: 11  NQFLRRNRRWPLSPYKTKWHQTFSEEQAMRTLRDAVRTTVEPLCHRSNKHLPQNPTEPNL 70

Query: 110 LSDLVNSFSAYEVNPTPQSYHLLFKILIQ 24
           +S LV+SFSAY   PTP++YH + + L +
Sbjct: 71  VSTLVDSFSAYNCEPTPKAYHFVIQSLCE 99


>ref|XP_012089729.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Jatropha curcas]
           gi|802761267|ref|XP_012089731.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Jatropha curcas]
           gi|802761270|ref|XP_012089732.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Jatropha curcas]
           gi|802761273|ref|XP_012089733.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Jatropha curcas]
           gi|802761276|ref|XP_012089734.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Jatropha curcas]
           gi|643706993|gb|KDP22803.1| hypothetical protein
           JCGZ_00390 [Jatropha curcas]
          Length = 500

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
 Frame = -2

Query: 233 YIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSIRKTK--------THLLSDLVNSFSAY 78
           ++RK R+WP  PYK +W  IF  + A Q+ KQ     +        ++LLS L++SFS Y
Sbjct: 13  FLRKHRRWPHSPYKAKWHHIFNQQQAMQNLKQEATSLQNLQQNSKSSNLLSSLIHSFSVY 72

Query: 77  EVNPTPQSYHLLFKILIQ 24
              PTPQ++H L K L +
Sbjct: 73  NSEPTPQAFHFLIKTLTE 90


>ref|XP_008244810.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial [Prunus mume]
          Length = 490

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
 Frame = -2

Query: 236 YYIRKRRKWPIRPYKTQWDQIFAFRLAKQSFKQSI--RKTKTHLLSDLVNSFSAYEVNPT 63
           +++RK RKWP+ P+ T+W Q F    A QS K+S   +    HLLS L+ SF++Y   P 
Sbjct: 13  FFLRKHRKWPVSPHNTKWHQTFNQNQAFQSLKKSSPPQNQPQHLLSTLIYSFNSYNCEPN 72

Query: 62  PQSYHLLFKILIQKRPSN 9
           P++Y+ + K L +    N
Sbjct: 73  PEAYNFVIKTLTKTSQFN 90