BLASTX nr result

ID: Rehmannia27_contig00034153 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00034153
         (422 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088544.1| PREDICTED: tRNA-dihydrouridine(47) synthase ...    84   3e-16
ref|XP_011088543.1| PREDICTED: tRNA-dihydrouridine(47) synthase ...    84   3e-16
emb|CDO96978.1| unnamed protein product [Coffea canephora]             58   4e-07
ref|XP_012837146.1| PREDICTED: tRNA-dihydrouridine(47) synthase ...    57   9e-07
ref|XP_009768328.1| PREDICTED: tRNA-dihydrouridine(47) synthase ...    54   8e-06

>ref|XP_011088544.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X2 [Sesamum indicum]
          Length = 714

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 45/81 (55%), Positives = 50/81 (61%)
 Frame = -3

Query: 243 MGDQKTMDNNTSNDISVXXXXXXXXXXXXAEELVAKAIAPVKRDFLRPPPLRTCDGRESS 64
           M D   +DN T N +S              +ELVAKAIAPVKR FLRPPP+RTCDG  SS
Sbjct: 30  MADPSLLDN-TLNPVSAAQPPPLDEAHPTPDELVAKAIAPVKRHFLRPPPVRTCDGNNSS 88

Query: 63  KADDKATTANDGVSAPILKEK 1
           KAD+ A    D  SAPILKEK
Sbjct: 89  KADEGAAAQKDDASAPILKEK 109


>ref|XP_011088543.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           isoform X1 [Sesamum indicum]
          Length = 715

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 45/81 (55%), Positives = 50/81 (61%)
 Frame = -3

Query: 243 MGDQKTMDNNTSNDISVXXXXXXXXXXXXAEELVAKAIAPVKRDFLRPPPLRTCDGRESS 64
           M D   +DN T N +S              +ELVAKAIAPVKR FLRPPP+RTCDG  SS
Sbjct: 30  MADPSLLDN-TLNPVSAAQPPPLDEAHPTPDELVAKAIAPVKRHFLRPPPVRTCDGNNSS 88

Query: 63  KADDKATTANDGVSAPILKEK 1
           KAD+ A    D  SAPILKEK
Sbjct: 89  KADEGAAAQKDDASAPILKEK 109


>emb|CDO96978.1| unnamed protein product [Coffea canephora]
          Length = 698

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = -3

Query: 153 EELVAKAIAPVKRDFLRPPPLRTCDGRESSKADDKATTANDGVSAPILKEK 1
           EELVAKAIAPVKR+FLRPPP+RT +   +S+  D AT  N   SAP++KEK
Sbjct: 44  EELVAKAIAPVKREFLRPPPIRTSNS-TTSQHHDAATEPN---SAPLIKEK 90


>ref|XP_012837146.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           [Erythranthe guttata] gi|604333563|gb|EYU37914.1|
           hypothetical protein MIMGU_mgv1a002380mg [Erythranthe
           guttata]
          Length = 681

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = -3

Query: 243 MGDQKTMDNNTSNDISVXXXXXXXXXXXXAEELVAKAIAPVKRDFLRPPPLRTCDGRESS 64
           MGD   +  N S+D+SV            AEE+VAK+IAPVKRDFL PPP+RTC+  ++S
Sbjct: 1   MGDDTAIVIN-SDDLSVDESPATFQYPLNAEEMVAKSIAPVKRDFLCPPPVRTCNRDDNS 59

Query: 63  KA 58
           KA
Sbjct: 60  KA 61


>ref|XP_009768328.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           [Nicotiana sylvestris]
          Length = 706

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = -3

Query: 153 EELVAKAIAPVKRDFLRPPPLRTCDGRES--SKADDKATTANDGVSAPILKEK 1
           EELVAKAIAPVKR++LRPPP R  + ++S  S    +   A +  SAPILKEK
Sbjct: 43  EELVAKAIAPVKREYLRPPPSRPSNNKDSNNSTVGVENDDAAEAKSAPILKEK 95


Top