BLASTX nr result

ID: Rehmannia27_contig00034074 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00034074
         (384 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011093738.1| PREDICTED: chloroplastic group IIA intron sp...   127   1e-31
ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron sp...    84   2e-16

>ref|XP_011093738.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Sesamum indicum]
          Length = 887

 Score =  127 bits (318), Expect = 1e-31
 Identities = 75/142 (52%), Positives = 90/142 (63%), Gaps = 17/142 (11%)
 Frame = -2

Query: 377 KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQT--------ERCQNEEPMVSVIQGSDDL 222
           KS LAPWVHGN  RK VFNS+GS   QE VH          E   NE+P+VSV+ G +DL
Sbjct: 142 KSILAPWVHGNG-RKNVFNSEGSRNIQENVHPKDDGLHGIQEHWPNEDPLVSVVVGYEDL 200

Query: 221 VKK---------KFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAG 69
           VK+         + GEFD+IPIGL EKNE LG ++S++  +MEDLS      SS K S  
Sbjct: 201 VKEVTENGRSEEEVGEFDDIPIGLSEKNEILGNEESEDFAAMEDLSTISLEISSEKCSND 260

Query: 68  ADDLKRLPWERKANAEFVKENK 3
           A+DL RLPWERK + EFVKE K
Sbjct: 261 ANDLMRLPWERKIDEEFVKEEK 282


>ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Erythranthe guttata]
           gi|604318307|gb|EYU29891.1| hypothetical protein
           MIMGU_mgv1a001353mg [Erythranthe guttata]
          Length = 835

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 53/127 (41%), Positives = 68/127 (53%)
 Frame = -2

Query: 383 KIKSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQTERCQNEEPMVSVIQGSDDLVKKKFG 204
           K KS LAPWVHGNE R+++  S+GS K QE V   +        V    G  D   +KF 
Sbjct: 134 KPKSILAPWVHGNESRRELPVSEGSTKNQENVRTEKEFLVSPVRVLAEYGKSD---EKFI 190

Query: 203 EFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPWERKANA 24
           EFDE PI L EKN             +E+ + + R  + +K S   D L RLPWERK + 
Sbjct: 191 EFDETPIRLTEKN-----------AVVENSATTDRTATRIKPSVNGDGLNRLPWERKNDE 239

Query: 23  EFVKENK 3
           EFVK++K
Sbjct: 240 EFVKKDK 246


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