BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00031644
         (478 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposo...   191   1e-55
gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposo...   185   3e-54
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]   189   8e-54
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   186   1e-53
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   189   2e-53
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424...   189   5e-53
ref|XP_015385017.1| PREDICTED: uncharacterized protein LOC107176...   181   7e-53
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   187   8e-53
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178...   187   1e-52
ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415...   187   2e-52
gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposo...   182   3e-52
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]   186   8e-52
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...   186   1e-51
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo...   185   1e-51
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   183   8e-51
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   182   3e-50
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   182   3e-50
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...   179   3e-50
gb|KYP75364.1| Copia protein [Cajanus cajan]                          179   3e-50
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo...   181   3e-50

>gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 540

 Score =  191 bits (486), Expect = 1e-55
 Identities = 83/154 (53%), Positives = 122/154 (79%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  ERKH+H V +G++ L +++LP  FW  AF+++V+ INRLP+ ++QN  P+QK
Sbjct: 42  THHQNGVVERKHRHIVELGLTLLVEADLPMQFWDYAFLTSVYLINRLPSSSIQNEVPYQK 101

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF +TP+Y FLK FGCAC+P+LRPYN++KLQ RS +C+FLGYS +HKGY+CL+  GR+Y+
Sbjct: 102 LFNNTPDYHFLKVFGCACFPHLRPYNRTKLQLRSQECLFLGYSTSHKGYKCLAADGRLYI 161

Query: 362 ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQLPV 463
           ++ V FNE +FPY TLF+ S + S+  +T+++P+
Sbjct: 162 SKDVIFNEAKFPYKTLFTSSPTHSS-QNTIEVPL 194


>gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 426

 Score =  185 bits (469), Expect = 3e-54
 Identities = 83/164 (50%), Positives = 113/164 (68%), Gaps = 9/164 (5%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH+QNG+PERKH+H     ++ LA ++LP  FW +AF++A   IN LPTP+LQN+SP+Q 
Sbjct: 115 THEQNGRPERKHRHITETSLTLLANASLPLHFWGEAFLTATTLINLLPTPSLQNISPYQI 174

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y FLK+FGC CYP LRPYNQ KL F+S +C+FLGYS  HKGY+CLSP+G+ Y+
Sbjct: 175 LFHKPPDYNFLKTFGCGCYPLLRPYNQHKLDFKSHQCLFLGYSNQHKGYKCLSPTGKCYI 234

Query: 362 ARTVSFNELEFPY---------PTLFSVSDSFSTPSHTLQLPVL 466
           +R V FNE  FPY          ++  +  S  +P  T+ +P +
Sbjct: 235 SRHVKFNESFFPYKHSPNPFLSSSILDIYTSHPSPPLTVLIPTV 278


>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
          Length = 722

 Score =  189 bits (481), Expect = 8e-54
 Identities = 86/138 (62%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
 Frame = +2

Query: 5   HQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNL-SPFQK 181
           HQQ G+ ERKH+H +++ ++FLAQ+ +P +FW DA VS VF IN+LPT  L N  SPF+ 
Sbjct: 426 HQQQGRVERKHRHIIDLSLTFLAQAVMPLTFWLDACVSFVFIINQLPTKVLANFQSPFET 485

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LFGS P+Y F K FGC+CYPYLR YN  K  F+STKC+FLGYSPAH GYRC S S RIYV
Sbjct: 486 LFGSKPDYSFFKVFGCSCYPYLRSYNSHKFSFKSTKCLFLGYSPAHNGYRCFSSSNRIYV 545

Query: 362 ARTVSFNELEFPYPTLFS 415
           A+ V+FNE +FPY TLF+
Sbjct: 546 AKLVTFNENDFPYSTLFT 563


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  186 bits (472), Expect = 1e-53
 Identities = 81/155 (52%), Positives = 121/155 (78%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  ERKH+H V +G++ LAQ++LP  FW  AF+++V+ INRLP+ ++Q+  PF+K
Sbjct: 192 THHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPFRK 251

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y FL+ FGC+C+P+LRPYN++KLQ RS +CVFLGYS +HKGY+CL+P+GRI++
Sbjct: 252 LFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRIFI 311

Query: 362 ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQLPVL 466
           ++ V F E  FPYP+LF  S + + P+ ++ +P++
Sbjct: 312 SKDVIFCETRFPYPSLFPAS-ATNPPTSSIPVPLV 345


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  189 bits (481), Expect = 2e-53
 Identities = 86/159 (54%), Positives = 122/159 (76%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  ERKH+H V +G++ LAQ++LP  FW  AF+++V+ INRLP+ ++Q   PF+K
Sbjct: 303 THHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPFRK 362

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y FL+ FGC+C+P+LRPYN++KLQFRS +CVFLGYS +HKGY+CL+PSGR+++
Sbjct: 363 LFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRVFI 422

Query: 362 ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQLPVLPSLP 478
           ++ V F E  FPYPTLFS S   S  S ++ +P++ + P
Sbjct: 423 SKDVIFCENRFPYPTLFSPSTP-SPSSSSITVPLVVTNP 460


>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
          Length = 1270

 Score =  189 bits (481), Expect = 5e-53
 Identities = 89/164 (54%), Positives = 115/164 (70%), Gaps = 6/164 (3%)
 Frame = +2

Query: 5    HQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQKL 184
            HQQNG+ ERKH+H V VG+SFLAQ+++P  +WW+AF SAV+ INRLPT  L   SPF+ L
Sbjct: 787  HQQNGRAERKHRHIVEVGLSFLAQAHMPLLYWWEAFTSAVYVINRLPTAILDFHSPFELL 846

Query: 185  FGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYVA 364
            F   P+Y FLK FG AC+P+LRP+   K QF + KCVF+GYS  HKGY+C+S SG+IY+A
Sbjct: 847  FKKVPDYDFLKVFGSACFPFLRPFQNHKFQFHTEKCVFIGYSDDHKGYKCMSSSGKIYIA 906

Query: 365  RTVSFNELEFPYPTLFSVSDS------FSTPSHTLQLPVLPSLP 478
            R+V+FNE EFP+ T F  + S        T   T  L ++ SLP
Sbjct: 907  RSVNFNEKEFPFSTGFLQTSSADKVKLHKTQVSTAPLILIKSLP 950


>ref|XP_015385017.1| PREDICTED: uncharacterized protein LOC107176694 [Citrus sinensis]
          Length = 426

 Score =  181 bits (460), Expect = 7e-53
 Identities = 81/153 (52%), Positives = 110/153 (71%), Gaps = 3/153 (1%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  E KH+H V + ++ LAQ+ +P+  WWDAF +AV+ INRLP+P LQ L+P++K
Sbjct: 232 THHQNGLVEMKHRHIVELDLTLLAQAQIPFKLWWDAFHTAVYHINRLPSPVLQLLTPYEK 291

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
            F   P+Y FL+ FGCACYPYLR YN+ K  + S+KC+F+GYSP+HKGY+CL   G++YV
Sbjct: 292 TFKHKPDYDFLRCFGCACYPYLRDYNKHKFAYHSSKCIFIGYSPSHKGYKCLHSLGQVYV 351

Query: 362 ARTVSFNELEFPYPT---LFSVSDSFSTPSHTL 451
           AR V+F+E  FPY T     S + + S  SH+L
Sbjct: 352 ARHVTFDESVFPYTTESIFHSHAKAGSQTSHSL 384


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 785

 Score =  187 bits (476), Expect = 8e-53
 Identities = 84/159 (52%), Positives = 118/159 (74%)
 Frame = +2

Query: 2    THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
            TH QNG  ERKH+H V +G++ LAQ++LP  FW  AF+++V+ INRLP+ ++QN  PF+K
Sbjct: 556  THHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRK 615

Query: 182  LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
            LF   P+Y FL+ FGC+C+P+LRPYN++KLQFRS +CVFLGYS +HKGY+CL+P+GRI++
Sbjct: 616  LFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQECVFLGYSTSHKGYKCLAPTGRIFI 675

Query: 362  ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQLPVLPSLP 478
            ++ V F E  FPYP+LF    +          P+ PS+P
Sbjct: 676  SKDVVFCETRFPYPSLFPAPAT---------NPLTPSIP 705


>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
          Length = 877

 Score =  187 bits (476), Expect = 1e-52
 Identities = 86/146 (58%), Positives = 106/146 (72%)
 Frame = +2

Query: 5    HQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQKL 184
            H QN K ERKH+H V  G++ LAQ++LP  FWW+AF +A + INRLPTP L N SPF+KL
Sbjct: 612  HHQNRKIERKHRHIVETGLTLLAQAHLPLKFWWNAFHTATYLINRLPTPILNNKSPFEKL 671

Query: 185  FGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYVA 364
            F   P+Y  +K FGC+CYPYLRPYN  KLQFRS +CVFLGYS  HKGY+CL  SGR+Y++
Sbjct: 672  FHKLPDYTMMKVFGCSCYPYLRPYNHHKLQFRSERCVFLGYSSLHKGYQCLHLSGRVYIS 731

Query: 365  RTVSFNELEFPYPTLFSVSDSFSTPS 442
              V+F+E  FP    F  +D FST S
Sbjct: 732  NHVTFDESFFP----FQSADKFSTKS 753


>ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415746 [Ziziphus jujuba]
          Length = 884

 Score =  187 bits (475), Expect = 2e-52
 Identities = 82/142 (57%), Positives = 105/142 (73%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNGK ERKH+H   VG+S LAQ+++   +WW+AF SAV+ INR PT  L   SPFQK
Sbjct: 383 THAQNGKAERKHRHITEVGLSLLAQAHMTLKYWWEAFSSAVYLINRTPTTVLDYKSPFQK 442

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           ++   P+Y FL  FGCACYPYLRPY+  KLQFR++KCVF+GYS  HKGY+ + PSGR+YV
Sbjct: 443 VYNQVPDYGFLTVFGCACYPYLRPYHTQKLQFRTSKCVFVGYSTEHKGYKYMHPSGRLYV 502

Query: 362 ARTVSFNELEFPYPTLFSVSDS 427
           A++V FNE +FP+   F  + S
Sbjct: 503 AKSVKFNEFDFPFAAGFMSNTS 524


>gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 555

 Score =  182 bits (463), Expect = 3e-52
 Identities = 82/151 (54%), Positives = 115/151 (76%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  E KH+H V +G++ LA++NLP  F   AF+++V+ IN+LP+ ++QN  P+QK
Sbjct: 312 THHQNGVVEHKHRHIVELGLTMLAKANLPMQFLDYAFLTSVYLINQLPSSSIQNEVPYQK 371

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y FLK FGC+C+P+LRPYN+SKLQ RS +C+FLGYS +HKGY+CL+ +GR+Y+
Sbjct: 372 LFNKIPDYHFLKVFGCSCFPHLRPYNKSKLQLRSQECLFLGYSTSHKGYKCLAANGRLYI 431

Query: 362 ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQ 454
           ++ V FNE++FPY TLFS S     P+H  Q
Sbjct: 432 SKDVIFNEVKFPYKTLFSPS-----PTHASQ 457


>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
          Length = 1099

 Score =  186 bits (472), Expect = 8e-52
 Identities = 89/159 (55%), Positives = 111/159 (69%), Gaps = 9/159 (5%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNL-SPFQ 178
           THQQ  + E+KH H +++ ++ LAQ  +P +FWWDA VS+VF IN+L T  L N  SPF+
Sbjct: 399 THQQQRRVEQKHHHIIDLSLTLLAQDAMPLTFWWDACVSSVFIINQLLTKVLANFQSPFK 458

Query: 179 KLFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIY 358
            LFGS  +Y F K FGC+CY YLRPYN  K  FRSTKC+FLGYSP HKGYRCLS SG+IY
Sbjct: 459 TLFGSKLDYSFFKVFGCSCYSYLRPYNSHKFSFRSTKCLFLGYSPXHKGYRCLSXSGQIY 518

Query: 359 VARTVSFNELEFPYPTLF--------SVSDSFSTPSHTL 451
           VA++++FNE +FPY TL         S    FS PS+ L
Sbjct: 519 VAKSITFNENDFPYSTLLTQPNIPHQSFIHKFSCPSYVL 557


>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score =  186 bits (471), Expect = 1e-51
 Identities = 81/142 (57%), Positives = 105/142 (73%)
 Frame = +2

Query: 2    THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
            TH QNG  ERKH+H   +G++ LAQ+ +P  FWWD+F +A + INRLPTP L   SP++ 
Sbjct: 691  THNQNGLVERKHRHITELGLTLLAQAAMPLKFWWDSFHTATYIINRLPTPVLSIKSPYES 750

Query: 182  LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
            LF  +P+YKFL+ FGC+C+ +LR YN+ K QF ++KCVFLGYSP HKGY+CL PSGR Y+
Sbjct: 751  LFQLSPDYKFLRVFGCSCFLFLREYNKHKFQFHTSKCVFLGYSPLHKGYKCLHPSGRTYI 810

Query: 362  ARTVSFNELEFPYPTLFSVSDS 427
            A  V F+E  FPY +LF VS S
Sbjct: 811  ASHVLFDESSFPYSSLFHVSSS 832


>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1007

 Score =  185 bits (470), Expect = 1e-51
 Identities = 82/135 (60%), Positives = 100/135 (74%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           THQQNG PERKH+H    G++ LAQ++LP SFW +AF++A   IN LPTP L N SP++ 
Sbjct: 247 THQQNGSPERKHRHITETGLTLLAQASLPLSFWGEAFLTATSLINMLPTPNLDNASPYEM 306

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+YKFLK FGCACYP LRPYN  K  F+S +C+FLGYSP+HKGY CLSPSG+ Y+
Sbjct: 307 LFHKAPDYKFLKIFGCACYPLLRPYNPHKFDFKSQQCLFLGYSPSHKGYICLSPSGKRYI 366

Query: 362 ARTVSFNELEFPYPT 406
           +R V F E  FP  T
Sbjct: 367 SRNVKFFETVFPCQT 381


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score =  183 bits (465), Expect = 8e-51
 Identities = 78/133 (58%), Positives = 104/133 (78%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           T  QNG+ ERKH+H V  G++ LAQ+ +P  +WW+AF +AVF INRLPT  ++N SP+Q+
Sbjct: 518 TSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQ 577

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y  +K+FGCACYP L+PYNQ KLQF +TKCVFLGYS +HKGY+CL+ +GRI++
Sbjct: 578 LFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKGYKCLNSTGRIFI 637

Query: 362 ARTVSFNELEFPY 400
           +R V FNE  FP+
Sbjct: 638 SRHVVFNEHHFPF 650


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score =  182 bits (461), Expect = 3e-50
 Identities = 81/154 (52%), Positives = 113/154 (73%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  ERKH+H V +G++ +AQ+ LP  FW  +F++AV+ INRLP+ ++QN  P+ K
Sbjct: 317 THHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHK 376

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y  L+ FGC+C+P+LRPYN+ KLQFRS +CVFLGYS +HKGY+CL+  GR+Y+
Sbjct: 377 LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYI 436

Query: 362 ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQLPV 463
           ++ V FNE +FPY  LFS     S+ +   QLP+
Sbjct: 437 SKDVVFNETKFPYKDLFS-----SSKASDSQLPI 465


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  182 bits (461), Expect = 3e-50
 Identities = 81/154 (52%), Positives = 113/154 (73%)
 Frame = +2

Query: 2    THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
            TH QNG  ERKH+H V +G++ +AQ+ LP  FW  +F++AV+ INRLP+ ++QN  P+ K
Sbjct: 652  THHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHK 711

Query: 182  LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
            LF   P+Y  L+ FGC+C+P+LRPYN+ KLQFRS +CVFLGYS +HKGY+CL+  GR+Y+
Sbjct: 712  LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYI 771

Query: 362  ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQLPV 463
            ++ V FNE +FPY  LFS     S+ +   QLP+
Sbjct: 772  SKDVVFNETKFPYKDLFS-----SSKASDSQLPI 800


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score =  179 bits (454), Expect = 3e-50
 Identities = 81/147 (55%), Positives = 111/147 (75%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  E KH+H V +G++ LAQ+ L  SFW  AF+++V+ INRLP+ ++Q   PFQK
Sbjct: 268 THHQNGVVECKHRHIVELGLTLLAQAQLSMSFWDYAFLTSVYLINRLPSSSIQQDVPFQK 327

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y FL+ FGC+C+P+L PYN++KLQFRS +CVFLGYS +HKGY+CL+PSGRI++
Sbjct: 328 LFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRIFI 387

Query: 362 ARTVSFNELEFPYPTLFSVSDSFSTPS 442
           ++ V F E  FPYP++F  S   S+ S
Sbjct: 388 SKDVIFCENHFPYPSMFPPSTPSSSSS 414


>gb|KYP75364.1| Copia protein [Cajanus cajan]
          Length = 702

 Score =  179 bits (455), Expect = 3e-50
 Identities = 82/161 (50%), Positives = 116/161 (72%), Gaps = 4/161 (2%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           T QQNGK ERKH+H V +G++ LAQ+ +P  F W+AF +AVF INRLPTP ++N SP+  
Sbjct: 47  TSQQNGKAERKHRHVVELGLTLLAQAKMPLYFLWEAFSTAVFLINRLPTPIIRNKSPYSV 106

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           L    P+Y  LKSFGCACYP ++PYN  KLQ+ +TKCVFLGYS +HKG++C++ +GRI++
Sbjct: 107 LLNKEPDYNNLKSFGCACYPCIKPYNAHKLQYHTTKCVFLGYSSSHKGFKCMNSNGRIFI 166

Query: 362 ARTVSFNELEFPYPTLF----SVSDSFSTPSHTLQLPVLPS 472
           +R V FNE EFP+   F      ++ F+ P+ +   P++P+
Sbjct: 167 SRHVIFNEHEFPFHDGFLNKQKSAEIFTEPASSF-YPLIPA 206


>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1085

 Score =  181 bits (460), Expect = 3e-50
 Identities = 81/154 (52%), Positives = 112/154 (72%)
 Frame = +2

Query: 2   THQQNGKPERKHQHTVNVGMSFLAQSNLPYSFWWDAFVSAVFTINRLPTPTLQNLSPFQK 181
           TH QNG  ERKH+H V +G++ LAQ+ LP  FW  AF++ V+ INRLP+ ++QN+ P+ K
Sbjct: 524 THHQNGVVERKHRHIVELGLTLLAQAELPMQFWDHAFLTGVYLINRLPSSSIQNVVPYHK 583

Query: 182 LFGSTPNYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSGRIYV 361
           LF   P+Y  L+ FGC+C+P+LRPYN+ KLQFRS +CVFLGYS +HKGY+CL+   R+Y+
Sbjct: 584 LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADERLYI 643

Query: 362 ARTVSFNELEFPYPTLFSVSDSFSTPSHTLQLPV 463
           +  V FNE +FPY  LFS S + S   H + +P+
Sbjct: 644 SNDVVFNETKFPYKELFS-SSTASVSHHPISVPL 676