BLASTX nr result

ID: Rehmannia27_contig00030486 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00030486
         (446 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17911.1| unnamed protein product [Coffea canephora]             69   7e-11
ref|XP_009773459.1| PREDICTED: putative F-box protein At1g32420 ...    57   6e-07
ref|XP_009799847.1| PREDICTED: F-box/kelch-repeat protein At3g23...    55   3e-06
ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23...    54   7e-06
emb|CDP17910.1| unnamed protein product [Coffea canephora]             51   7e-06

>emb|CDP17911.1| unnamed protein product [Coffea canephora]
          Length = 419

 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 34/91 (37%), Positives = 51/91 (56%)
 Frame = -2

Query: 436 VFDDGEQIWRKDRTFGPIEVNMDRLLWCSKNGKILGVRTDGKLFVFDPKTRCVKLLFYAA 257
           V+D+G+  W      GPI + M+R + CSK+G IL    +G LF++DP T  +K    A 
Sbjct: 318 VYDEGKGRWDTKSCHGPIGLKMERHMQCSKDGVILAETPEGTLFLYDPVTNAIKEFRIAE 377

Query: 256 RQPQSFQIYRYAESLSYIKGMRQVNARRKRK 164
               S++ + Y ESL  +KGM +V  + K K
Sbjct: 378 AMKTSYEAFSYTESLVSLKGMEKVKEQDKDK 408


>ref|XP_009773459.1| PREDICTED: putative F-box protein At1g32420 [Nicotiana sylvestris]
          Length = 416

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = -2

Query: 445 DGWVFDDGEQIWRKDRTFGPIEVNMDRLLWCSKNGKILGVRTDGKLFVFDPKTRCVKL-L 269
           D WV DD E  W K R  G +    DR++ C +NG I+    +G LF+FDP T  VK  L
Sbjct: 305 DIWVMDD-EDGWSKKRNVGVL-FGFDRIIGCLRNGNIVAYDENGVLFLFDPMTSSVKAKL 362

Query: 268 FYAARQPQSFQIYRYAESLSYIKGMRQVNARRKR 167
                   S  I+ Y+ESL  I+GM  V  +  R
Sbjct: 363 CIDNANSGSSMIFNYSESLVLIEGMLPVKKQAAR 396


>ref|XP_009799847.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           sylvestris]
          Length = 411

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
 Frame = -2

Query: 445 DGWVFDDGEQIWRK----DRTFGPIEVNMDRLLWCSKNGKILGVRTDGKLFVFDPKTRCV 278
           D WV DD E  W K    +  FG      DR++ C +NG I+    +G LF+FDP T  V
Sbjct: 305 DIWVMDD-EDGWSKKCNVEMLFG-----FDRIIGCLRNGNIVAEDENGVLFLFDPVTNSV 358

Query: 277 KL-LFYAARQPQSFQIYRYAESLSYIKGMRQVNARRKR 167
           K  L        SF I  Y+ESL  I+GMR V  +  R
Sbjct: 359 KAKLCIDNANSGSFMISNYSESLVLIEGMRPVKKQAAR 396


>ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           pennellii]
          Length = 426

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = -2

Query: 445 DGWVFDDGEQIWRKDRTFGPIEVNMDRLLWCSKNGKILGVRTDGKLFVFDPKTRCVKLLF 266
           D WV DD +  W K  + GP+ V  DR+L C +NG I+    +G +F+ DP T  VK  F
Sbjct: 309 DVWVMDDVDG-WSKKYSVGPL-VGFDRILGCLRNGDIVAKNENGVIFLCDPITNSVKENF 366

Query: 265 YAAR-QPQSFQIYRYAESLSYIKGMRQV 185
                + +S+ I  Y+ESL  I GM  V
Sbjct: 367 SIDNSKDESYVIVDYSESLFLIGGMLPV 394


>emb|CDP17910.1| unnamed protein product [Coffea canephora]
          Length = 77

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 25/64 (39%), Positives = 36/64 (56%)
 Frame = -2

Query: 355 CSKNGKILGVRTDGKLFVFDPKTRCVKLLFYAARQPQSFQIYRYAESLSYIKGMRQVNAR 176
           CSK+G IL    +G LF++DP T  +K    A     S++ + Y ESL  +KGM +V  +
Sbjct: 3   CSKDGVILAETPEGTLFLYDPVTNAIKEFRIAEAMKTSYEAFSYTESLVSLKGMEKVEEQ 62

Query: 175 RKRK 164
            K K
Sbjct: 63  DKDK 66


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