BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00030347
         (575 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   136   9e-34
gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposo...   126   2e-33
gb|KYP47251.1| Retrovirus-related Pol polyprotein from transposo...   132   6e-33
gb|KYP44478.1| Retrovirus-related Pol polyprotein from transposo...   128   2e-32
gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposo...   131   2e-32
gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposo...   129   1e-31
gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposo...   129   1e-31
gb|KYP34400.1| Retrovirus-related Pol polyprotein from transposo...   125   6e-31
ref|XP_012472262.1| PREDICTED: uncharacterized protein LOC105789...   127   8e-31
ref|XP_012439042.1| PREDICTED: uncharacterized protein LOC105764...   126   9e-31
gb|KYP32605.1| Retrovirus-related Pol polyprotein from transposo...   119   2e-30
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   126   2e-30
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...   125   3e-30
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...   125   3e-30
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   125   4e-30
gb|KYP75950.1| Retrovirus-related Pol polyprotein from transposo...   119   7e-30
gb|KYP69731.1| Retrovirus-related Pol polyprotein from transposo...   124   7e-30
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   124   1e-29
gb|KYP46482.1| Retrovirus-related Pol polyprotein from transposo...   114   1e-29
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   123   1e-29

>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  136 bits (342), Expect = 9e-34
 Identities = 71/173 (41%), Positives = 99/173 (57%), Gaps = 1/173 (0%)
 Frame = -3

Query: 573 DRATQHILLTGNVKSGLYSFNLHCLKXXXXXXXXXXXXXXXXXSQWSPIVHSISLGPKLD 394
           D+ TQ +L+ G V+ GLY+F+   L                    +S  V + SL    D
Sbjct: 465 DQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVAS--SFSSKVCTTSLSSTFD 522

Query: 393 LELWHRRLGHANYETVTQALKSCNLSFHLNKSLA-LCSSCAVAKSHKLPFSNSHTDYHTP 217
           L  WH+RLGH +  T+   L  CN++ H+NK  +  CSSC + K H+ PFS SHT Y  P
Sbjct: 523 L--WHKRLGHPSAATIKNVLSKCNVA-HINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKP 579

Query: 216 LALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQ 58
           L LIH DLWGP  + S +GY YY+ F+DA ++FSWI+ L+NKS+    F +F+
Sbjct: 580 LELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFK 632


>gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 201

 Score =  126 bits (317), Expect = 2e-33
 Identities = 54/111 (48%), Positives = 75/111 (67%)
 Frame = -3

Query: 390 ELWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLA 211
           +LWH RLGH +   V   LKSCN+    N     C SC + KSH+LPF +S T Y +PL 
Sbjct: 37  QLWHSRLGHPSPRIVNTVLKSCNMPIAKNSDSFFCQSCCMGKSHQLPFIDSKTVYTSPLE 96

Query: 210 LIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQ 58
           LI++D+WGP+PI +TNG  YY+ F+DA +K++WIY L+ KS  ++AF  F+
Sbjct: 97  LIYSDIWGPSPIPATNGARYYIVFLDAYSKYTWIYLLQFKSQAFDAFIQFK 147


>gb|KYP47251.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 536

 Score =  132 bits (332), Expect = 6e-33
 Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
 Frame = -3

Query: 564 TQHILLTGNVKSGLYSF-NLHCLKXXXXXXXXXXXXXXXXXSQWSPIVHSISLGPKLDLE 388
           T+ +LL G++K GLY F NL  +                     + + + +S     D+ 
Sbjct: 321 TKMVLLKGHLKDGLYVFDNLRPIHTHTDIVQPLGVV--------TALYNIVSCN---DVS 369

Query: 387 LWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLAL 208
           LWH RL H +++ + + + SCN+    NK   +CSSC + KSHKLPFS S   Y+ PL +
Sbjct: 370 LWHSRLAHCSFKALKRVMVSCNIVVAENKMPFVCSSCCIGKSHKLPFSISKIVYNDPLEM 429

Query: 207 IHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQ 58
           I++D+WGP+P  S +G+ YY+ F+DA +KF+W+YFL+NKS+  N F  F+
Sbjct: 430 IYSDIWGPSPTPSRDGFRYYIIFVDAFSKFTWLYFLQNKSEALNCFIQFK 479


>gb|KYP44478.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 605

 Score =  128 bits (321), Expect(2) = 2e-32
 Identities = 62/145 (42%), Positives = 84/145 (57%), Gaps = 21/145 (14%)
 Frame = -3

Query: 429 IVHSISLGP--------------------KLDL-ELWHRRLGHANYETVTQALKSCNLSF 313
           + H+IS+GP                    K DL  +WH +LGHANY+ V   +  C +S 
Sbjct: 409 VFHNISVGPSVCNSVTTENSNSIRELPNNKCDLYRIWHAKLGHANYKIVHDVMNKCGVSV 468

Query: 312 HLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLALIHTDLWGPAPIKSTNGYTYYVTFID 133
             N + +LC SC + K HK PF  S+T Y +PL LI+TD+WGPAPI S++G  YY+ FID
Sbjct: 469 SKNSTFSLCKSCCLGKLHKQPFYYSNTVYTSPLQLIYTDIWGPAPIPSSSGSKYYIEFID 528

Query: 132 ACTKFSWIYFLKNKSDVYNAFFSFQ 58
           A +KF+WIY + NKS     F  F+
Sbjct: 529 AFSKFTWIYLISNKSQALQCFSHFK 553



 Score = 38.5 bits (88), Expect(2) = 2e-32
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -1

Query: 71  FFHFKNLAENQLNTKIKQLQSDG 3
           F HFKN+ ENQLN+KIK +Q+DG
Sbjct: 549 FSHFKNMIENQLNSKIKCIQTDG 571


>gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 562

 Score =  131 bits (329), Expect = 2e-32
 Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = -3

Query: 570 RATQHILLTGNVKSGLYSF-NLHCLKXXXXXXXXXXXXXXXXXSQWSPIVHSISLGPKLD 394
           + ++ ILL G +K+GLY+F NL  +                      P+    S      
Sbjct: 392 QGSRKILLQGKLKNGLYAFENLQIVHPNNDF----------------PVSALYSSTTCNS 435

Query: 393 LELWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPL 214
           L +WH RLGH   + V   LK CN+S  L+ +  +C SC + K HK  FS S + Y  PL
Sbjct: 436 LPIWHSRLGHCANKIVKHVLKQCNISVPLHDNATVCGSCCLGKMHKSSFSISESVYTEPL 495

Query: 213 ALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQK 55
            L+++D+WGP+PI S  GY YY+ F+DA +KFSW+YFLK +S   N+F  F+K
Sbjct: 496 QLVYSDIWGPSPIPSKEGYRYYIVFLDAYSKFSWVYFLKYRSQALNSFLEFKK 548


>gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 660

 Score =  129 bits (325), Expect = 1e-31
 Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
 Frame = -3

Query: 570 RATQHILLTGNVKSGLYSF-NLHCLKXXXXXXXXXXXXXXXXXSQWSPIVHSISLGPKLD 394
           + ++ ILL G +K+GLY+F NL  +                      P+    S      
Sbjct: 222 QGSRKILLQGKLKNGLYAFENLQIVHPNNDF----------------PVSALYSSTTCNS 265

Query: 393 LELWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPL 214
           L +WH RLGH   + V   LK CN+S  L+ +  +C SC + K HK  FS S + Y  PL
Sbjct: 266 LPIWHSRLGHCANKIVKHVLKQCNISVPLHDNATVCGSCCLGKMHKSSFSISESVYTEPL 325

Query: 213 ALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQK 55
            L+++D+WGP+PI S  GY YY+ F+DA +KFSW YFLK +S   N+F  F+K
Sbjct: 326 QLVYSDIWGPSPIPSKEGYRYYIVFLDAYSKFSWAYFLKYRSQALNSFLEFKK 378


>gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 546

 Score =  129 bits (323), Expect = 1e-31
 Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = -3

Query: 432 PIVHSISLGPKLDLELWHRRLGHANYETVTQALKSCNLSFHLNKSLA-LCSSCAVAKSHK 256
           P VH++S    +    WH RLGHA+ + +    K CN    +NKS++  C+SC + KSHK
Sbjct: 426 PFVHTVSSN-SVSYATWHSRLGHAHNDVIKSVFKLCNFPI-INKSVSDFCTSCCLGKSHK 483

Query: 255 LPFSNSHTDYHTPLALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYN 76
           LP   S T YHTP  LI++DLWGPAP+ S NGY YYVTF+DA T+F+WI+ LK+K+   +
Sbjct: 484 LPSHLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTFVDAHTRFTWIFLLKSKAHTLD 543

Query: 75  AF 70
            F
Sbjct: 544 VF 545


>gb|KYP34400.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 428

 Score =  125 bits (314), Expect = 6e-31
 Identities = 52/110 (47%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
 Frame = -3

Query: 384 WHRRLGHANYETVTQALKSCNLSFH-LNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLAL 208
           WH RLGH +++ +T+AL++CN+    +NK    C SC +AKSH++P  +S T Y  PL L
Sbjct: 222 WHLRLGHPHHDALTKALQTCNIHLPTVNKISDFCDSCCIAKSHRIPSQSSTTVYSKPLEL 281

Query: 207 IHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQ 58
           +  D+WGPA ++S+ GY Y++T +DACT+++WIY L+ KSDVY+ F +F+
Sbjct: 282 VFLDVWGPASLESSCGYLYFLTCVDACTRYTWIYLLRRKSDVYSNFLNFK 331


>ref|XP_012472262.1| PREDICTED: uncharacterized protein LOC105789428 [Gossypium
           raimondii]
          Length = 668

 Score =  127 bits (319), Expect = 8e-31
 Identities = 65/173 (37%), Positives = 92/173 (53%)
 Frame = -3

Query: 573 DRATQHILLTGNVKSGLYSFNLHCLKXXXXXXXXXXXXXXXXXSQWSPIVHSISLGPKLD 394
           D  T+ ILL G+V+ GLY  +L+                     Q  P  H  +      
Sbjct: 368 DLRTREILLRGSVQHGLYKLHLN---------------DGLRKFQTMPTAHCFTAKSATP 412

Query: 393 LELWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPL 214
           L +WH +LGH     + ++L+ CNL+F +NK   +  +C + K HK PFS S + Y  PL
Sbjct: 413 LRVWHSKLGHPCKNVLLKSLQHCNLAFDVNKDEFVYVACHLGKEHKQPFSPSTSQYSVPL 472

Query: 213 ALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQK 55
            L+  D+WGPA + S NG+ YYV F DACT++SW+YFL  KS+V   F  F +
Sbjct: 473 QLVVADVWGPALVTS-NGFRYYVIFTDACTRYSWVYFLHKKSEVLTVFLQFHR 524


>ref|XP_012439042.1| PREDICTED: uncharacterized protein LOC105764818 [Gossypium
           raimondii]
          Length = 514

 Score =  126 bits (316), Expect = 9e-31
 Identities = 59/111 (53%), Positives = 76/111 (68%)
 Frame = -3

Query: 393 LELWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPL 214
           L+LWH+RLGH+   T+ +AL  CN+S + NK L+   +C +   H LPFS SHT Y+ PL
Sbjct: 390 LDLWHQRLGHSCSSTLKKALNDCNVSIYGNKELSNYVACHLGNEHNLPFSLSHTMYNFPL 449

Query: 213 ALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSF 61
            L   D+WGP P+ S NGY YYV F DA T+++W+YFLKNKSDV   F SF
Sbjct: 450 ELFVMDVWGPVPMIS-NGYHYYVAFTDAYTRYTWVYFLKNKSDVLATFMSF 499


>gb|KYP32605.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 206

 Score =  119 bits (298), Expect = 2e-30
 Identities = 48/110 (43%), Positives = 77/110 (70%)
 Frame = -3

Query: 387 LWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLAL 208
           LWH RLGH + + +  AL++ ++  +      LC SC + K+H+LPF NS+++YHTPL L
Sbjct: 23  LWHSRLGHPSPKILKVALRNSHIPCNNFPDSVLCESCCMGKAHQLPFINSNSEYHTPLQL 82

Query: 207 IHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQ 58
           + +D+WGP+P+ ++ G  YY+ F+DA +K+SWIY L +KS+ + AF  F+
Sbjct: 83  VFSDIWGPSPVATSTGARYYIVFLDAFSKYSWIYLLNSKSEAFTAFQQFK 132


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  126 bits (316), Expect = 2e-30
 Identities = 59/125 (47%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 432 PIVHSISLGPKLDLELWHRRLGHANYETVTQALKSCNLSFHLNKSLA-LCSSCAVAKSHK 256
           P  H++S    +    WH RLGH + + +    K CN   ++NKS++  C+SC + KSHK
Sbjct: 137 PSAHTVS-SQSVSYATWHSRLGHPHNDVLKSVFKLCNFP-NINKSVSDFCTSCCLGKSHK 194

Query: 255 LPFSNSHTDYHTPLALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYN 76
           LP   S T YHTP  LI++DLWGPAP+ S NGY YYVTF+DA T+F+WI+ LK+K+   +
Sbjct: 195 LPSQLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTFVDAHTRFTWIFMLKSKAHTLD 254

Query: 75  AFFSF 61
            F  F
Sbjct: 255 VFKQF 259


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score =  125 bits (315), Expect = 3e-30
 Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 432 PIVHSISLGPKLDLELWHRRLGHANYETVTQALKSCNLSFHLNKSLA-LCSSCAVAKSHK 256
           P  H++S    +    WH RLGHA+ + +    K CN    +NKS++  C+SC + KSHK
Sbjct: 102 PSAHTVSSN-SVSYATWHSRLGHAHNDVIKSVFKLCNFPI-INKSVSDFCTSCCLGKSHK 159

Query: 255 LPFSNSHTDYHTPLALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYN 76
           LP   S T YHTP  LI++DLWGPAP+ S NGY YYVT +DA T+F+WI+ LK+K+   +
Sbjct: 160 LPSQLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLD 219

Query: 75  AFFSF 61
            F  F
Sbjct: 220 VFKQF 224


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score =  125 bits (315), Expect = 3e-30
 Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
 Frame = -3

Query: 432 PIVHSISLGPKLDLELWHRRLGHANYETVTQALKSCNLSFHLNKSLA-LCSSCAVAKSHK 256
           P  H++S    +    WH RLGHA+ + +    K CN    +NKS++  C+SC + KSHK
Sbjct: 123 PSAHTVSSN-SVSYATWHSRLGHAHNDVIKSVFKLCNFPI-INKSVSDFCTSCCLGKSHK 180

Query: 255 LPFSNSHTDYHTPLALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYN 76
           LP   S T YHTP  LI++DLWGPAP+ S NGY YYVT +DA T+F+WI+ LK+K+   +
Sbjct: 181 LPSQLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLD 240

Query: 75  AFFSF 61
            F  F
Sbjct: 241 VFKQF 245


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  125 bits (315), Expect = 4e-30
 Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
 Frame = -3

Query: 573  DRATQHILLTGNVKSGLYSFNLHCLKXXXXXXXXXXXXXXXXXSQWSPIVHSISLGPKLD 394
            D +T+ +L+ G +K GLY F+   LK                     P        P   
Sbjct: 450  DPSTRTVLMHGQLKGGLYVFDNTQLKLPLHNSSCFASTALPSKEPTVPA------SPTSP 503

Query: 393  LELWHRRLGHANYETVTQALKSCNLSFHLNKSLAL-CSSCAVAKSHKLPFSNSHTDYHTP 217
              LWH RLGH +   V+  L  CNL  HLNK  +L CS C + K HK  F +S + Y  P
Sbjct: 504  FTLWHNRLGHPSSHIVSLVLNKCNLP-HLNKIPSLICSXCCMGKIHKSSFLHSTSSYTKP 562

Query: 216  LALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQKPC*KPI 37
            L LIHTDLWGPA   S++G+ YY+ FIDA ++F+WIY LK+KS+ +  F  F+      +
Sbjct: 563  LELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQL 622

Query: 36   KY*NQTITK*WG 1
             +  + +   WG
Sbjct: 623  GHKIKAVQSDWG 634


>gb|KYP75950.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 261

 Score =  119 bits (298), Expect = 7e-30
 Identities = 48/110 (43%), Positives = 77/110 (70%)
 Frame = -3

Query: 387 LWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLAL 208
           LWH RLGH + + +  AL++ ++  +      LC SC + K+H+LPF NS+++YHTPL L
Sbjct: 83  LWHSRLGHPSPKILKVALRNSHIPCNNFPDSVLCESCCMGKAHQLPFINSNSEYHTPLQL 142

Query: 207 IHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQ 58
           + +D+WGP+P+ ++ G  YY+ F+DA +K+SWIY L +KS+ + AF  F+
Sbjct: 143 VFSDIWGPSPVATSTGARYYIVFLDAFSKYSWIYLLNSKSEAFTAFQQFK 192


>gb|KYP69731.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 590

 Score =  124 bits (311), Expect = 7e-30
 Identities = 54/119 (45%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
 Frame = -3

Query: 384 WHRRLGHANYETVTQALKSCNLSFH-LNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLAL 208
           WH RLGH +++ +T+ALKSCN+    +NK    C SC +AKSH++P  +S T Y  PL L
Sbjct: 427 WHLRLGHPHHDALTKALKSCNIHVPTVNKISYFCDSCCIAKSHRIPSQSSTTIYSKPLEL 486

Query: 207 IHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQKPC*KPIKY 31
           +  D+WGPA ++S+ GY+Y++T +DACT++ WIY L  K DV++ F +F+    K  +Y
Sbjct: 487 VFLDVWGPASLESSCGYSYFLTCVDACTRYMWIYLLHKKLDVFSHFLNFKALAEKQFQY 545


>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1429

 Score =  124 bits (311), Expect = 1e-29
 Identities = 59/124 (47%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
 Frame = -3

Query: 426 VHSISLGPKLDLELWHRRLGHANYETVTQALKSCNL-SFHLNKSLALCSSCAVAKSHKLP 250
           VHSI          WH RLGH N +T+   LKSCN+ +F+ NK+   C SC + KSH+LP
Sbjct: 500 VHSIVTSHNDLYFQWHHRLGHTNLDTMNNVLKSCNMPTFNKNKT-DFCISCCLGKSHRLP 558

Query: 249 FSNSHTDYHTPLALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAF 70
              S + Y++PL LI+ DLWGPAP++S+ GY YY++FIDA +K+ W+YFL +KS+    F
Sbjct: 559 SQLSQSTYNSPLELIYCDLWGPAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIF 618

Query: 69  FSFQ 58
             F+
Sbjct: 619 KQFK 622


>gb|KYP46482.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 107

 Score =  114 bits (284), Expect = 1e-29
 Identities = 47/106 (44%), Positives = 72/106 (67%)
 Frame = -3

Query: 387 LWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPLAL 208
           LWH RL HA+ +TV   L  C+++ + + +  LC SC + K+ +LPF  S + Y +PL L
Sbjct: 1   LWHSRLAHASLKTVRSVLSHCSIACNHSATSLLCQSCCMGKARQLPFFTSQSVYTSPLDL 60

Query: 207 IHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAF 70
           + TD+WGPAP+ S+NG  YY+ FIDA ++++W+Y L+NKS  +  F
Sbjct: 61  VFTDIWGPAPLTSSNGSRYYIIFIDAFSRYTWMYLLQNKSQEFTTF 106


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score =  123 bits (308), Expect(2) = 1e-29
 Identities = 63/172 (36%), Positives = 90/172 (52%)
 Frame = -3

Query: 573 DRATQHILLTGNVKSGLYSFNLHCLKXXXXXXXXXXXXXXXXXSQWSPIVHSISLGPKLD 394
           D+ T  ILL G +K GLY                         ++   +  SI       
Sbjct: 327 DKLTGRILLEGKIKDGLYQL----------------PGGSTSTNKRPHVFFSIK------ 364

Query: 393 LELWHRRLGHANYETVTQALKSCNLSFHLNKSLALCSSCAVAKSHKLPFSNSHTDYHTPL 214
            E WHR+LGH N + + + +K CN+     ++   C +C   K+H LPF NS +    PL
Sbjct: 365 -ETWHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPL 423

Query: 213 ALIHTDLWGPAPIKSTNGYTYYVTFIDACTKFSWIYFLKNKSDVYNAFFSFQ 58
            L+H+D+WGPAPI S +G+ YYV F+D  ++F+WIY LK KSDV+ AF  F+
Sbjct: 424 DLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFR 475



 Score = 33.5 bits (75), Expect(2) = 1e-29
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -1

Query: 71  FFHFKNLAENQLNTKIKQLQSDG 3
           F  F+NL ENQ N +IK LQ DG
Sbjct: 471 FIQFRNLVENQFNKRIKTLQCDG 493