BLASTX nr result
ID: Rehmannia27_contig00030310
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00030310
(486 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975... 271 6e-82
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera] 249 2e-80
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 257 1e-76
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 256 2e-76
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 250 7e-76
ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 247 2e-75
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449... 238 5e-70
gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposo... 214 8e-67
gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposo... 211 1e-65
gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-... 218 2e-65
gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subc... 218 2e-65
gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group... 216 2e-65
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 225 2e-65
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-... 217 3e-64
emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera] 204 4e-64
emb|CAE04777.3| OSJNBb0115I21.5 [Oryza sativa Japonica Group] 217 4e-64
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc... 215 6e-64
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc... 217 7e-64
gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subc... 219 1e-63
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 220 1e-63
>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe
guttata]
Length = 1203
Score = 271 bits (693), Expect = 6e-82
Identities = 128/160 (80%), Positives = 143/160 (89%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
LRKF +DSPPA P+DL +HLAKN GEPV QL+YS+IIGSLMYV NCTRPDIA++V+KL
Sbjct: 325 LRKFKMFDSPPATIPIDLKIHLAKNCGEPVDQLKYSQIIGSLMYVMNCTRPDIAHSVSKL 384
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNP NDHW AL RVLRYL+ T++ GLHY+RYP+VLEGYSDANWISD+KD KSTSGY
Sbjct: 385 SRFTSNPRNDHWNALTRVLRYLKYTLDLGLHYTRYPSVLEGYSDANWISDTKDYKSTSGY 444
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEW 482
VFTIGG AVSWKS+KQTCIARSTMESEFIALDK G EAEW
Sbjct: 445 VFTIGGAAVSWKSTKQTCIARSTMESEFIALDKIGAEAEW 484
>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
Length = 313
Score = 249 bits (635), Expect = 2e-80
Identities = 120/161 (74%), Positives = 140/161 (86%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L KF+ +S A+TPVD++L L+KN+ E VSQ+EYSR+IGSLMY+ +CTRPDIAYA +KL
Sbjct: 57 LGKFDKDNSGVARTPVDVTLXLSKNKXESVSQVEYSRVIGSLMYLMSCTRPDIAYAXSKL 116
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SR+TSNPG HW+ +IRVL+YLR T +YGLHY+RYPAVLEGYSDANWIS+ KDSKS SGY
Sbjct: 117 SRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISNVKDSKSHSGY 176
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GG A SWKSSKQT IARSTMESEFIALDK GEEAEWL
Sbjct: 177 VFTLGGAAXSWKSSKQTVIARSTMESEFIALDKCGEEAEWL 217
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 257 bits (656), Expect = 1e-76
Identities = 124/161 (77%), Positives = 143/161 (88%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L KF+ +S A+TPVD++LHL+KN+GE VSQ+EYSRIIGSLMY+ +CTRPDIAYAV+KL
Sbjct: 1021 LGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVSKL 1080
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SR+TSNPG HW+ +IRVL+YLR T +YGLHY+RYPAVLEGYSDANWIS+ KDSKS SGY
Sbjct: 1081 SRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISNVKDSKSHSGY 1140
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GG AVSWKSSKQ IARSTMESEFIALDK GEEAEWL
Sbjct: 1141 VFTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWL 1181
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 256 bits (654), Expect = 2e-76
Identities = 124/161 (77%), Positives = 142/161 (88%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L KF+ +S A+TPVD++LHL+KN+GE VSQ+EYSRIIGSLMY+ +CTRPDIAYAV KL
Sbjct: 1060 LGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKL 1119
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SR+TSNPG HW+ +IRVL+YLR T +Y LHY+RYPAVLEGYSDANWIS+ KDSKS SGY
Sbjct: 1120 SRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVLEGYSDANWISNVKDSKSHSGY 1179
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GG AVSWKSSKQT IARSTMESEFIALDK GEEAEWL
Sbjct: 1180 VFTLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWL 1220
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 250 bits (639), Expect = 7e-76
Identities = 121/156 (77%), Positives = 132/156 (84%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L++FN YD P KTPVDL+LH KN G + QLEYSRIIGSLMYV NC DIAYAVNKL
Sbjct: 684 LKRFNQYDDSPIKTPVDLNLHSTKNNGPAIDQLEYSRIIGSLMYVMNCMCLDIAYAVNKL 743
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFT+N G DHWK L+RVLRYLR T+NYGLHY RYP +LEGYSDANWI D KDSKSTSGY
Sbjct: 744 SRFTNNMGKDHWKVLVRVLRYLRYTLNYGLHYLRYPTLLEGYSDANWIFDMKDSKSTSGY 803
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGE 470
+FTIGG A+S KSSKQTCIARSTMESEFIALDKAG+
Sbjct: 804 IFTIGGVAISRKSSKQTCIARSTMESEFIALDKAGK 839
>ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103426950 [Malus domestica]
Length = 724
Score = 247 bits (631), Expect = 2e-75
Identities = 115/161 (71%), Positives = 138/161 (85%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
LRK+ +S A TP D + L KN+G+ +SQ EYS++IGSLMY+ NCTRPDIAY+V++L
Sbjct: 189 LRKYGHLESKDAITPFDANSKLKKNKGDAISQREYSQVIGSLMYIMNCTRPDIAYSVSRL 248
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SR+T NPG+DHW+ALIRV+RYL+ TMNYGLHY+RYP VLEG++DANWISDS D+KSTSGY
Sbjct: 249 SRYTCNPGHDHWEALIRVMRYLKHTMNYGLHYTRYPPVLEGFTDANWISDSTDTKSTSGY 308
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GG A+SWKSS QTCIA STMESEFIALD AG EAEWL
Sbjct: 309 VFTLGGAAISWKSSXQTCIAXSTMESEFIALDMAGGEAEWL 349
>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
Length = 2699
Score = 238 bits (607), Expect = 5e-70
Identities = 108/161 (67%), Positives = 135/161 (83%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
LR+F +D PA T D L KN+G+ +SQLEYS++IGSLMY+ N TRPD+AYAV++L
Sbjct: 2499 LRRFGQFDCKPAATSFDAGCKLEKNKGDAISQLEYSQVIGSLMYLMNSTRPDLAYAVSRL 2558
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SR+TSNP +HW AL++VLRYL+ T++YGLHY++YP ++EG+SDANWISD+ +SKSTSGY
Sbjct: 2559 SRYTSNPAQEHWDALVQVLRYLKNTLDYGLHYTKYPPIVEGFSDANWISDTTESKSTSGY 2618
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GG A+SWKSSKQ CIARSTME EFI LD AGEEAEWL
Sbjct: 2619 VFTLGGAAISWKSSKQKCIARSTMEFEFITLDLAGEEAEWL 2659
>gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 304
Score = 214 bits (544), Expect = 8e-67
Identities = 101/161 (62%), Positives = 129/161 (80%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L+KFN +D P TP D S+ L KN GE VS L+YS+IIGSL++++N +RPDIAYAV +L
Sbjct: 64 LKKFNYFDVKPVSTPFDPSIKLKKNIGESVSPLKYSQIIGSLLHLSNFSRPDIAYAVGRL 123
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
R+T NP + HW AL R+ RYL+ T+NYG+HY+ YP V+EG+ DANWISDS ++KSTSGY
Sbjct: 124 GRYTHNPDHSHWLALERLFRYLKGTVNYGIHYACYPVVIEGFCDANWISDSDETKSTSGY 183
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+ GGAV+WKS+KQT I+RSTME+E IALD A EAE+L
Sbjct: 184 VFTLAGGAVAWKSAKQTIISRSTMEAEIIALDTASSEAEFL 224
>gb|KYP65229.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 211 bits (538), Expect = 1e-65
Identities = 97/161 (60%), Positives = 132/161 (81%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L+KF+ YD TP D++ L +N+GE ++Q +Y++IIGSL+++ N +RPDIAYAV++L
Sbjct: 57 LKKFDYYDCKSVTTPYDVNSPLKQNKGESLAQSQYAQIIGSLLHLMNFSRPDIAYAVSRL 116
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SR+T P DHW+AL R++RYLR TM+YG+ YS +PAVLEGYSDANWIS+S ++KSTSGY
Sbjct: 117 SRYTHCPNQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISNSDETKSTSGY 176
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGGA++W+S +Q+ IARSTMESEF+AL+ EAEWL
Sbjct: 177 VFTLGGGAIAWRSVRQSIIARSTMESEFVALEMTSTEAEWL 217
>gb|AAO66536.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 570
Score = 218 bits (554), Expect = 2e-65
Identities = 107/161 (66%), Positives = 127/161 (78%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 382 LNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIGSLMYLASATRPDISFAVSKL 441
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW AL RV+RYL+ TM GLHYS YPAVLEGYSD+NWISD + K+TSGY
Sbjct: 442 SRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLEGYSDSNWISDVDEIKATSGY 501
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGG VSW+S KQT + RSTME+E ALD A EAEWL
Sbjct: 502 VFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 542
>gb|ABF99970.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 572
Score = 218 bits (554), Expect = 2e-65
Identities = 107/161 (66%), Positives = 127/161 (78%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 384 LNRFGYIDSKPSPTPYDPSLLLRKNKRIIRNQLEYSQIIGSLMYLASATRPDISFAVSKL 443
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW AL RV+RYL+ TM GLHYS YPAVLEGYSD+NWISD + K+TSGY
Sbjct: 444 SRFTSNPGDDHWHALERVMRYLKCTMELGLHYSGYPAVLEGYSDSNWISDVDEIKATSGY 503
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGG VSW+S KQT + RSTME+E ALD A EAEWL
Sbjct: 504 VFTLGGGTVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 544
>gb|AAT93952.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038209|gb|AAT94012.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 493
Score = 216 bits (549), Expect = 2e-65
Identities = 105/159 (66%), Positives = 128/159 (80%)
Frame = +3
Query: 9 KFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKLSR 188
+F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KLS+
Sbjct: 138 RFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSQ 197
Query: 189 FTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGYVF 368
FTSNPG+DHW+A+ RV+RYL+ TM GLHYS YPAVLEGYSD+NWISD + K+TSGYVF
Sbjct: 198 FTSNPGDDHWRAVERVMRYLKGTMELGLHYSGYPAVLEGYSDSNWISDVDEIKATSGYVF 257
Query: 369 TIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
T+GGGAVSW+S KQT + RSTME+E ALD A EAEWL
Sbjct: 258 TLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 296
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 225 bits (573), Expect = 2e-65
Identities = 107/161 (66%), Positives = 129/161 (80%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L KF + K P+DLS KN GE SQLEY+R++GSLMY+ NCTRPDI+ A++KL
Sbjct: 1006 LDKFKYLNFNVVKIPIDLSCTFQKNVGESDSQLEYARVLGSLMYIMNCTRPDISCAISKL 1065
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNP HW A+ VL YL+ + +Y LHY++YPA++EGYSDANWI+ S + KSTSGY
Sbjct: 1066 SRFTSNPNQTHWMAMKHVLGYLKHSQHYALHYNKYPAMIEGYSDANWITGSNEVKSTSGY 1125
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+G GAVSWKSSKQTCIARSTMES+FIALDKAG+EAEWL
Sbjct: 1126 VFTLGRGAVSWKSSKQTCIARSTMESKFIALDKAGKEAEWL 1166
>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 713
Score = 217 bits (553), Expect = 3e-64
Identities = 106/161 (65%), Positives = 129/161 (80%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 440 LNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKL 499
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW+AL RV+RYL+ T+ GLHY+ YPAVLEGYSD+NWISD + K+TSGY
Sbjct: 500 SRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGY 559
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGGAVSW+S KQT + RSTME+E ALD A EAEWL
Sbjct: 560 VFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 600
>emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera]
Length = 229
Score = 204 bits (520), Expect = 4e-64
Identities = 96/159 (60%), Positives = 122/159 (76%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
LRKF +D P TP + + L KN+ V+Q+EY++IIGSLMY+ NC RPDIAYAV KL
Sbjct: 71 LRKFEHFDCKPVSTPYNPNSQLKKNREHSVAQIEYAQIIGSLMYLMNCIRPDIAYAVGKL 130
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
S++T + DHW + RVL+YLR T+NYGL+YS +P+VLEG+SDANWISD + KSTSGY
Sbjct: 131 SQYTQSSNQDHWTVVRRVLKYLRDTINYGLYYSGFPSVLEGFSDANWISDLDEMKSTSGY 190
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAE 479
VF + G VSWKS+KQTC+ RSTM +EFIAL+KA EA+
Sbjct: 191 VFILSGSVVSWKSAKQTCVTRSTMVTEFIALEKASSEAK 229
>emb|CAE04777.3| OSJNBb0115I21.5 [Oryza sativa Japonica Group]
Length = 722
Score = 217 bits (553), Expect = 4e-64
Identities = 106/161 (65%), Positives = 128/161 (79%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 552 LNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKL 611
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW+AL RV+RYL+ TM GLHY+ YPAVLEGYSD+NWISD + K+T GY
Sbjct: 612 SRFTSNPGDDHWRALERVIRYLKGTMELGLHYTGYPAVLEGYSDSNWISDVDEIKATGGY 671
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGGAVSW+S KQT + RSTME+E ALD A EAEWL
Sbjct: 672 VFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 712
>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 622
Score = 215 bits (547), Expect = 6e-64
Identities = 105/161 (65%), Positives = 128/161 (79%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 342 LNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKL 401
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW+AL RV+RYL+ T+ GLHY+ YPAVLEGYSD+NWISD + K+TSGY
Sbjct: 402 SRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGY 461
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGGAVSW+S KQT + RS ME+E ALD A EAEWL
Sbjct: 462 VFTLGGGAVSWRSCKQTILTRSIMEAELTALDTATVEAEWL 502
>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 764
Score = 217 bits (553), Expect = 7e-64
Identities = 106/161 (65%), Positives = 129/161 (80%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 471 LNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKL 530
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW+AL RV+RYL+ T+ GLHY+ YPAVLEGYSD+NWISD + K+TSGY
Sbjct: 531 SRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGY 590
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGGAVSW+S KQT + RSTME+E ALD A EAEWL
Sbjct: 591 VFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 631
>gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 219 bits (557), Expect = 1e-63
Identities = 106/161 (65%), Positives = 130/161 (80%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 696 LNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKL 755
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW+AL RV+RYL+ T+ GLHY+ YPAVLEGYSD+NWISD + K+TSGY
Sbjct: 756 SRFTSNPGDDHWRALERVMRYLKGTIELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGY 815
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGGAVSW+S KQT + RSTME+E ALD A +EAEWL
Sbjct: 816 VFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATDEAEWL 856
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 220 bits (560), Expect = 1e-63
Identities = 107/161 (66%), Positives = 130/161 (80%)
Frame = +3
Query: 3 LRKFNAYDSPPAKTPVDLSLHLAKNQGEPVSQLEYSRIIGSLMYVTNCTRPDIAYAVNKL 182
L +F DS P+ TP D SL L KN+ +QLEYS+IIGSLMY+ + TRPDI++AV+KL
Sbjct: 1047 LNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKL 1106
Query: 183 SRFTSNPGNDHWKALIRVLRYLRLTMNYGLHYSRYPAVLEGYSDANWISDSKDSKSTSGY 362
SRFTSNPG+DHW+AL RV+RYL+ T+ GLHY+RYPAVLEGYSD+NWISD + K+TSGY
Sbjct: 1107 SRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNWISDVDEIKATSGY 1166
Query: 363 VFTIGGGAVSWKSSKQTCIARSTMESEFIALDKAGEEAEWL 485
VFT+GGGAVSW+S KQT + RSTME+E ALD A EAEWL
Sbjct: 1167 VFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207