BLASTX nr result
ID: Rehmannia27_contig00030203
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00030203
(608 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 146 4e-37
ref|XP_012853620.1| PREDICTED: uncharacterized protein LOC105973... 141 7e-36
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 139 1e-34
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 139 1e-34
gb|KYP60991.1| Retrovirus-related Pol polyprotein from transposo... 136 4e-34
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 134 4e-33
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392... 134 6e-33
gb|AIC77183.1| polyprotein [Gossypium barbadense] 134 8e-33
ref|XP_010034499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 134 8e-33
gb|KYP40501.1| Retrovirus-related Pol polyprotein from transposo... 125 1e-32
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 133 1e-32
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 133 1e-32
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 132 2e-32
gb|KYP44928.1| Retrovirus-related Pol polyprotein from transposo... 129 3e-32
gb|KYP64150.1| Retrovirus-related Pol polyprotein from transposo... 130 3e-32
ref|XP_012461628.1| PREDICTED: uncharacterized protein LOC105781... 128 3e-32
gb|KYP46539.1| Retrovirus-related Pol polyprotein from transposo... 129 4e-32
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 132 4e-32
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 132 4e-32
gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposo... 131 4e-32
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 146 bits (368), Expect = 4e-37
Identities = 79/186 (42%), Positives = 108/186 (58%), Gaps = 11/186 (5%)
Frame = +3
Query: 6 SPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDES 185
SPTKAV N+TPYEAWY +KP V H +VFGS+AY I S +R K DEK K +FIGY +S
Sbjct: 575 SPTKAVLNRTPYEAWYGKKPWVSHLKVFGSVAYTLIESHNRSKLDEKSVKCIFIGYCSQS 634
Query: 186 KGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPSTSQASSQVQNIEQDPK 365
KGY+L +P + K+ +SR+VVFDE A+W W+ + + S S Q Q P
Sbjct: 635 KGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSEDGALVEISSESEVAQSEDQQPSVQIPA 694
Query: 366 VPTP-----------RIGAESDHESPIRRTRSLREIYESSELVLFTNKTQTVQEATQDYK 512
PTP ++S E+P R+ RSLR+IYE+++ VLF T +EA + +
Sbjct: 695 SPTPSHSPSSPNLSSSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVEKEE 753
Query: 513 LRGGVK 530
+K
Sbjct: 754 WXSAMK 759
>ref|XP_012853620.1| PREDICTED: uncharacterized protein LOC105973146 [Erythranthe
guttata]
Length = 580
Score = 141 bits (355), Expect = 7e-36
Identities = 76/185 (41%), Positives = 104/185 (56%), Gaps = 13/185 (7%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK V+N+TP EAW +KP V H RVFGSIAY H+P+Q R K D++ K +FIGY
Sbjct: 368 RSPTKDVENQTPLEAWSGKKPSVHHLRVFGSIAYGHVPAQERSKLDDRSAKYVFIGYDLN 427
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGK--QVVDSISY-----EDPSTSQASSQV 341
SKGY+L +P K+ +SRDV FDE A+WDWK + + D Y E+ S
Sbjct: 428 SKGYKLYNPANGKIVVSRDVEFDEEASWDWKAQEAETYDFFPYFGEEDEELPLQNTSPPS 487
Query: 342 QNIEQDPKVPTPRIGAESDHESPIRRTRSLREIYESSELV------LFTNKTQTVQEATQ 503
+Q P + ES E PIR+ ++L ++Y +E+V ++ T EA +
Sbjct: 488 PLQQQSPLTHSHSSSEESSSERPIRKFKNLTDLYNETEVVNDLLCFFVDHEPLTFHEAVK 547
Query: 504 DYKLR 518
D K R
Sbjct: 548 DEKWR 552
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 139 bits (350), Expect = 1e-34
Identities = 75/177 (42%), Positives = 102/177 (57%), Gaps = 11/177 (6%)
Frame = +3
Query: 6 SPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDES 185
SPTKAV N+TPYEAWY +KP V H +VFGS+AY I S + DEK K +FIGY +S
Sbjct: 641 SPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLDEKSIKCIFIGYCSQS 700
Query: 186 KGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPSTSQASSQVQNIEQDPK 365
KGY+L +P + K+ +SR+VV DE A+W W+ + + S S Q Q P
Sbjct: 701 KGYKLYNPVSGKIIVSRNVVXDEKASWTWRVSEDGALVEISSESEVAQSEDQQPSVQIPA 760
Query: 366 VPTP-----------RIGAESDHESPIRRTRSLREIYESSELVLFTNKTQTVQEATQ 503
PTP ++S E+P R+ RSLR+IYE+++ VLF T +EA +
Sbjct: 761 XPTPSHSPSSPNLSSSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVE 816
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 139 bits (350), Expect = 1e-34
Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 11/177 (6%)
Frame = +3
Query: 6 SPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDES 185
SPTKAV N+TPYEAWY +KP V H +VFGS+AY S +R K DEK K +FIGY +S
Sbjct: 752 SPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQS 811
Query: 186 KGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPSTSQASSQVQNIEQDPK 365
KGY+L +P + K+ +SR+VVFDE A+ W+ + + S S Q Q P
Sbjct: 812 KGYKLYNPVSGKIIVSRNVVFDEKASXTWRVSEDGALVEISSESEMAQSEDQQPSVQIPX 871
Query: 366 VPTP-----------RIGAESDHESPIRRTRSLREIYESSELVLFTNKTQTVQEATQ 503
PTP ++S E+P R+ RSLR+IYE+++ VLF T +EA +
Sbjct: 872 SPTPSHSPSSPNLSXSSSSQSSEETPPRKFRSLRDIYETTQ-VLFVADPTTFEEAVE 927
>gb|KYP60991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 612
Score = 136 bits (343), Expect = 4e-34
Identities = 72/160 (45%), Positives = 99/160 (61%), Gaps = 6/160 (3%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
R PTKAV++KTP EAW +KP H RVFGSI Y H+P + R K ++K + +F+GYS +
Sbjct: 111 RCPTKAVRDKTPIEAWSGKKPSAKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYSSQ 170
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISY---EDPSTSQASSQVQNIE 353
SKGYR+ + T K+TISRD+ DE ATW+W+ +++ Y P+TS Q+I
Sbjct: 171 SKGYRVYNLQTKKLTISRDIEVDENATWNWEEERIEKKTIYMPINQPTTSSLEDNNQDIV 230
Query: 354 QDPKVPTPRI---GAESDHESPIRRTRSLREIYESSELVL 464
P+ +PRI ES ES RR RSL +IYE+ L +
Sbjct: 231 ISPE--SPRIVPQQEESSPESTPRRVRSLVDIYETCNLAI 268
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 134 bits (338), Expect = 4e-33
Identities = 71/182 (39%), Positives = 105/182 (57%), Gaps = 14/182 (7%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
R PTKA+ NKTP EAW +KP V HF+VFG + Y+ +P Q R K DE +K +F+GYS +
Sbjct: 734 RCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLDETSEKCIFMGYSSQ 793
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQV------VDSISYEDP--------ST 320
SKGYRL + T K+ ISRDV+FDE W+W+ ++ VD + + P ST
Sbjct: 794 SKGYRLYNLKTXKLIISRDVIFDEKVAWNWEEGKILKKTILVDELQTKAPVETGNGSTST 853
Query: 321 SQASSQVQNIEQDPKVPTPRIGAESDHESPIRRTRSLREIYESSELVLFTNKTQTVQEAT 500
S +++ P + +P + S +P R+ RSL ++YE L + + Q+ +EA
Sbjct: 854 SSPQESPRSVPLSPSIESPTSXSSSPSSTP-RKMRSLTDVYERCNLCIV--EPQSFEEAI 910
Query: 501 QD 506
+D
Sbjct: 911 KD 912
>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
napus]
Length = 2682
Score = 134 bits (337), Expect = 6e-33
Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK+V KTP EAW +KP V H RVFGSIA+AH+P + R K D+K +K +FIGY
Sbjct: 677 RSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDAN 736
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPSTSQASSQVQNIEQ-- 356
SKGY+L +P T K ISR+V+FDE WDW+ S + S + +N+EQ
Sbjct: 737 SKGYKLYNPETKKTIISRNVIFDEEGEWDWR--------SNNEDYNFFPSFEEENVEQPR 788
Query: 357 -DPKVP--TPRIGAESDHESPIR--RTRSLREIYESSE 455
+P P +P ++ D S R R RSL++IYE +E
Sbjct: 789 EEPATPPTSPTTSSQGDESSSERTPRFRSLQDIYEVTE 826
Score = 134 bits (337), Expect = 6e-33
Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK+V KTP EAW +KP V H RVFGSIA+AH+P + R K D+K +K +FIGY
Sbjct: 2016 RSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDAN 2075
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPSTSQASSQVQNIEQ-- 356
SKGY+L +P T K ISR+V+FDE WDW+ S + S + +N+EQ
Sbjct: 2076 SKGYKLYNPETKKTIISRNVIFDEEGEWDWR--------SNNEDYNFFPSFEEENVEQPR 2127
Query: 357 -DPKVP--TPRIGAESDHESPIR--RTRSLREIYESSE 455
+P P +P ++ D S R R RSL++IYE +E
Sbjct: 2128 EEPATPPTSPTTSSQGDESSSERTPRFRSLQDIYEVTE 2165
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 134 bits (336), Expect = 8e-33
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Frame = +3
Query: 9 PTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDESK 188
PTK+V++KTP EAW KP+V H ++FG IAYAH+P Q R+K D++G+K +FIGY SK
Sbjct: 688 PTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSK 747
Query: 189 GYRLLDPNTNKVTISRDVVFDETATWDW--KGKQVVDSISYEDPSTSQASSQVQNI-EQD 359
YRL +P T K+ ISRDV FDE W W + K+V ED + + Q+
Sbjct: 748 AYRLYNPLTKKLIISRDVEFDEADYWRWSEEEKKVEGLFFNEDDNNQEEQGDDQSPGTTA 807
Query: 360 PKVPTPRIGAESDHESPIRRTRSLREIYESSELV 461
P PT G+ S E+P RTRSL +IY S+E V
Sbjct: 808 PSSPTSSSGSSSLDEAP-TRTRSLNDIYNSTEPV 840
>ref|XP_010034499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104423746
[Eucalyptus grandis]
Length = 1827
Score = 134 bits (336), Expect = 8e-33
Identities = 69/178 (38%), Positives = 108/178 (60%), Gaps = 10/178 (5%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
+ PTK VQNKTP +AW +KP H +VFG I Y HIP+Q K DEK +K +F+GY+D+
Sbjct: 1113 KCPTKVVQNKTPVKAWSGRKPSAKHLKVFGCICYVHIPAQKMSKLDEKTEKGIFLGYNDQ 1172
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQV-------VDSISYEDPSTSQASSQV 341
SKGYR+ + T K+ IS+DV FD+ A W+W+ +++ +D ++ STSQ +V
Sbjct: 1173 SKGYRIYNLRTKKLMISQDVEFDKNAAWNWEDEKIKKKYITLLDIPPAQEESTSQEEGEV 1232
Query: 342 QNIEQDPKVP--TPRI-GAESDHESPIRRTRSLREIYESSELVLFTNKTQTVQEATQD 506
+ P +PR+ ES ESP+ R ++LR IY++ + + + ++A++D
Sbjct: 1233 PDSTTHDITPPSSPRVTQEESTPESPVLRVKALRRIYDTCSFAIL--EPENYEQASKD 1288
>gb|KYP40501.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 194
Score = 125 bits (313), Expect = 1e-32
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPT++V KTP EAW +KP + H RVFGSIA+ H+P + R K ++K +K +FIGY
Sbjct: 29 RSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLNDKSEKYIFIGYDAN 88
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPSTSQASSQVQNIEQDP 362
SKGY+L +P++ K IS++V+FDE WDW D + Q Q E
Sbjct: 89 SKGYKLYNPDSKKTIISQNVMFDEEGEWDW-STNCEDHTFFPCAEEDDVEQQQQPQETPT 147
Query: 363 KVPTPRIGAESDHES---PIRRTRSLREIYESSE 455
PT D+ES + R RSL+EIYE++E
Sbjct: 148 TPPTSPNTTLQDYESLSERMPRFRSLQEIYEATE 181
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 133 bits (334), Expect = 1e-32
Identities = 67/156 (42%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK+V KTP EAW +KP V H RVFGSIA+AH+P + R K D+K +K +FIGY +
Sbjct: 669 RSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNN 728
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQ----VVDSISYEDPSTSQASSQVQNI 350
SKGY+L +P+T K ISR++VFDE WDW + ++P ++ +
Sbjct: 729 SKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEP 788
Query: 351 EQDPKVPT-PRIGAESDHESPIRRTRSLREIYESSE 455
P PT +I S +P R RS++E+YE +E
Sbjct: 789 TTPPTSPTSSQIEESSSERTP--RFRSIQELYEVTE 822
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 133 bits (334), Expect = 1e-32
Identities = 67/156 (42%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK+V KTP EAW +KP V H RVFGSIA+AH+P + R K D+K +K +FIGY +
Sbjct: 669 RSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNN 728
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQ----VVDSISYEDPSTSQASSQVQNI 350
SKGY+L +P+T K ISR++VFDE WDW + ++P ++ +
Sbjct: 729 SKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEP 788
Query: 351 EQDPKVPT-PRIGAESDHESPIRRTRSLREIYESSE 455
P PT +I S +P R RS++E+YE +E
Sbjct: 789 TTPPTSPTSSQIEESSSERTP--RFRSIQELYEVTE 822
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 132 bits (331), Expect = 2e-32
Identities = 67/156 (42%), Positives = 92/156 (58%), Gaps = 5/156 (3%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK+V KTP EAW +KP V H RVFGSIA+AH+P + R K D+K +K +FIGY +
Sbjct: 166 RSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNN 225
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQ----VVDSISYEDPSTSQASSQVQNI 350
SKGY+L +P+T K ISR++VFDE WDW + + P ++ +
Sbjct: 226 SKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEP 285
Query: 351 EQDPKVPT-PRIGAESDHESPIRRTRSLREIYESSE 455
P PT +I S +P R RS++E+YE +E
Sbjct: 286 TTPPTSPTSSQIEESSSERTP--RFRSIQELYEVTE 319
>gb|KYP44928.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 394
Score = 129 bits (323), Expect = 3e-32
Identities = 75/177 (42%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
R PTK+V NKTP EAW ++P + H R+FG IAYAH+P+Q R+K D+KG++ +FIGYS
Sbjct: 35 RCPTKSVLNKTPEEAWSGRRPSIRHLRIFGCIAYAHVPNQLRKKLDDKGERCVFIGYSSN 94
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGK----QVVDSISYEDPSTSQASSQVQNI 350
SK Y+L +P TNKV ISRDV FDE WDW K ++V S +YE+ S Q V
Sbjct: 95 SKAYKLYNPETNKVIISRDVTFDEKGMWDWSFKSQKEKMVISNNYEE-SEGQPDPVVDEP 153
Query: 351 EQDPKVPTPRIGAESDHESPIRRTRSLREIYESSELVLFTN-KTQTVQEATQDYKLR 518
E + P R + E + + E LF + + T +EA+ D K R
Sbjct: 154 ESSNR-PRRRCQLPARLEDYVMSNDNDPSDEEIINFALFADCELVTFEEASNDEKWR 209
>gb|KYP64150.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 474
Score = 130 bits (326), Expect = 3e-32
Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
R PTKAV +KTP EAW +KP H RVFGSI Y H+P + R K ++K + +F+GY+ +
Sbjct: 35 RCPTKAVWDKTPIEAWSGKKPSAKHLRVFGSIYYIHVPDEKRHKLEDKTVRDIFLGYNSQ 94
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISY---EDPSTSQASSQVQNIE 353
SKGYR+ + T K+TISRD+ DE ATW+W+ +++ Y P+TS Q+I
Sbjct: 95 SKGYRVYNLQTKKLTISRDIEVDENATWNWEKERIEKKTIYMPINQPTTSSLEDNNQDIV 154
Query: 354 QDPKVPTPRIGAESDHESPIRRTRSLREIYESSELVL 464
P++ + E ES R+ RSL +IYE+ L +
Sbjct: 155 ISPRIVPQQ--EEPSPESTPRQVRSLVDIYETCNLAI 189
>ref|XP_012461628.1| PREDICTED: uncharacterized protein LOC105781655 [Gossypium
raimondii]
Length = 365
Score = 128 bits (321), Expect = 3e-32
Identities = 61/155 (39%), Positives = 96/155 (61%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
R PTKA+ KTP+E W + KP + H +VFG I YAH+P+ R+K E+ + + +GYS
Sbjct: 215 RLPTKALTQKTPFEGWLRFKPSLAHLKVFGCICYAHVPTIKRDKLSERARPSVLVGYSTV 274
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISYEDPSTSQASSQVQNIEQDP 362
KGYR+LDP+TNKV++SRD+VF+E + W+W+ + +++S ED +T + + +E D
Sbjct: 275 KKGYRILDPSTNKVSVSRDMVFNEKSCWNWE-RSEPEAVS-EDLATDRIGTDQDGLEMD- 331
Query: 363 KVPTPRIGAESDHESPIRRTRSLREIYESSELVLF 467
+ P++ TR L EIYE + + +F
Sbjct: 332 -----------IDDEPVKGTRPLAEIYERAHIAIF 355
>gb|KYP46539.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 409
Score = 129 bits (323), Expect = 4e-32
Identities = 69/160 (43%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
R PTK V++KTP EAW ++KP H RVFGSI Y H+ + K ++K + +F+GYS +
Sbjct: 35 RCPTKTVRDKTPIEAWSEKKPSAKHLRVFGSICYIHVLDEKGIKLEDKTVRGIFLGYSSQ 94
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISY---EDPSTSQASSQVQNIE 353
+KGYR+ + T K+TISRD+ +E ATW+W+ K++ I Y P+TS Q+I
Sbjct: 95 TKGYRVYNLETKKLTISRDIEVNENATWNWEEKRIEKKIIYMPINQPTTSSLEDNNQDIV 154
Query: 354 QDPKVPTPRI---GAESDHESPIRRTRSLREIYESSELVL 464
P+ +PRI ES ES RR RSL +IYE+ L +
Sbjct: 155 ISPE--SPRIVPQQEESSPESTPRRVRSLVDIYETCNLAM 192
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 132 bits (331), Expect = 4e-32
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 10/182 (5%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK V+++TP EAW KP+VDH RVFGSIAYAH+P Q R K D++ +K +FIGY
Sbjct: 360 RSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFKLDDRSEKHVFIGYDAS 419
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQ-VVDSISYEDPSTSQA---SSQVQNI 350
SKGY+L +PN K +SRDV F E TW+W+ K+ D Y + +A + +
Sbjct: 420 SKGYKLYNPNNGKTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFEEIDEEALTPNDSTPAL 479
Query: 351 EQDPKVPTPRIGAESDHESPIRRTRSLREIYESSELV-----LFT-NKTQTVQEATQDYK 512
P +E RR R+++E+Y+ +E++ LF +K EA +D +
Sbjct: 480 SPTPSTNEASSSSEGSSSERPRRMRNIQELYDETEVINDLFCLFVDSKPLNFDEAMKDKR 539
Query: 513 LR 518
R
Sbjct: 540 WR 541
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 132 bits (331), Expect = 4e-32
Identities = 67/156 (42%), Positives = 92/156 (58%), Gaps = 5/156 (3%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
RSPTK+V KTP EAW +KP V H RVFGSIA+AH+P + R K D+K +K +FIGY +
Sbjct: 669 RSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNN 728
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQ----VVDSISYEDPSTSQASSQVQNI 350
SKGY+L +P+T K ISR++VFDE WDW + + P ++ +
Sbjct: 729 SKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEP 788
Query: 351 EQDPKVPT-PRIGAESDHESPIRRTRSLREIYESSE 455
P PT +I S +P R RS++E+YE +E
Sbjct: 789 TTPPTSPTSSQIEESSSERTP--RFRSIQELYEVTE 822
>gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 703
Score = 131 bits (330), Expect = 4e-32
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Frame = +3
Query: 3 RSPTKAVQNKTPYEAWYKQKPKVDHFRVFGSIAYAHIPSQSREKFDEKGKKLLFIGYSDE 182
R PTKAV++KTP EAW +KP H R+FGSI Y H+P + R K ++K + +F+GY +
Sbjct: 31 RRPTKAVRDKTPIEAWSGKKPSAKHLRIFGSICYIHVPDEKRHKLEDKTVRGIFLGYISQ 90
Query: 183 SKGYRLLDPNTNKVTISRDVVFDETATWDWKGKQVVDSISY---EDPSTSQASSQVQNIE 353
SKGYR+ + T K+TISRD+ DE ATW+W+ +++ Y P+TS Q+I
Sbjct: 91 SKGYRVYNLQTKKLTISRDIEVDENATWNWEEERIEKKTIYMPINQPTTSSLEDNNQDIV 150
Query: 354 QDPK----VPTPRIGAESDHESPIRRTRSLREIYESSELVLFTNKTQTVQEAT 500
P+ VP + ES ES RR RSL +IYE+ L + + + +EAT
Sbjct: 151 ISPESSIIVP---LQEESSPESTPRRVRSLVDIYETYNLAIL--EPGSFEEAT 198