BLASTX nr result

ID: Rehmannia27_contig00028083 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00028083
         (389 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088147.1| PREDICTED: transcription factor bHLH18-like ...    94   2e-20
gb|AKN09541.1| basic helix-loop-helix transcription factor [Salv...    75   2e-13
ref|XP_007041458.1| Basic helix-loop-helix DNA-binding superfami...    67   1e-10
ref|XP_008372895.1| PREDICTED: transcription factor bHLH18-like ...    64   1e-09
ref|XP_011457907.1| PREDICTED: transcription factor bHLH18-like ...    60   2e-08
ref|XP_008236173.1| PREDICTED: transcription factor bHLH25-like ...    60   3e-08
ref|XP_009346450.1| PREDICTED: transcription factor bHLH18-like ...    60   3e-08
ref|XP_007200351.1| hypothetical protein PRUPE_ppa008130mg [Prun...    59   1e-07
ref|XP_009378561.1| PREDICTED: transcription factor bHLH18-like ...    57   6e-07
gb|KDO67951.1| hypothetical protein CISIN_1g021208mg [Citrus sin...    53   9e-06
ref|XP_006486799.1| PREDICTED: transcription factor bHLH25-like ...    53   9e-06

>ref|XP_011088147.1| PREDICTED: transcription factor bHLH18-like [Sesamum indicum]
          Length = 356

 Score = 94.0 bits (232), Expect = 2e-20
 Identities = 56/94 (59%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHV--LD 99
           MEISSFR LADLGM+DPLF QQW SV+  D+LSS SIASAF  DF  +  SQ      L 
Sbjct: 1   MEISSFRTLADLGMEDPLFFQQW-SVDPLDELSSVSIASAFGGDFHHSYTSQQAPAAQLG 59

Query: 98  FTKSVESSQIDENRPLKQIKITN--WNINSCKPE 3
           F ++ E S   EN+PLKQ+K T   WN NSCKPE
Sbjct: 60  FKRAPEPSPAGENKPLKQLKTTTVAWN-NSCKPE 92


>gb|AKN09541.1| basic helix-loop-helix transcription factor [Salvia miltiorrhiza]
          Length = 309

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 43/90 (47%), Positives = 57/90 (63%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEIS+FR +AD GMDDPLF QQW  V+  +D S  SI+ AFS+ F  +     Q +LDF 
Sbjct: 1   MEISTFRNIADFGMDDPLFFQQW-QVDPMEDFS--SISCAFSEGFHQSYTQ--QPLLDFK 55

Query: 92  KSVESSQIDENRPLKQIKITNWNINSCKPE 3
           +  E+S   E+RP KQ++ +NW    CK E
Sbjct: 56  RPAEASPAGESRPSKQLRTSNW----CKQE 81


>ref|XP_007041458.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
           [Theobroma cacao] gi|508705393|gb|EOX97289.1| Basic
           helix-loop-helix DNA-binding superfamily protein,
           putative [Theobroma cacao]
          Length = 412

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 39/91 (42%), Positives = 55/91 (60%)
 Frame = -1

Query: 275 SMEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDF 96
           SMEISS R L +LGMDDP    QW  +NS D+LS   +A+AF ++ Q + ++      + 
Sbjct: 66  SMEISSIRELPELGMDDPNLFSQW-QMNSVDELSILPLAAAFGENLQQSFSNHNYPAFNP 124

Query: 95  TKSVESSQIDENRPLKQIKITNWNINSCKPE 3
             SVE S    +RP+KQ K  +W  +SCKP+
Sbjct: 125 KTSVEPSHNGIDRPVKQHKTNSW--DSCKPD 153


>ref|XP_008372895.1| PREDICTED: transcription factor bHLH18-like [Malus domestica]
          Length = 341

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 34/90 (37%), Positives = 53/90 (58%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEISS   L++LGM+DP F+ QW  +NS D+L    +A+AF ++ Q   +SQ   + +  
Sbjct: 1   MEISSRGGLSELGMEDPFFINQWQYMNSLDELGMLPLAAAFGENLQ---HSQFHPIFNLK 57

Query: 92  KSVESSQIDENRPLKQIKITNWNINSCKPE 3
             +++S    +RP KQ+K   W   SCK +
Sbjct: 58  TPIDNSHTAIDRPTKQLKTDGW--TSCKTD 85


>ref|XP_011457907.1| PREDICTED: transcription factor bHLH18-like [Fragaria vesca subsp.
           vesca]
          Length = 332

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 34/83 (40%), Positives = 51/83 (61%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEISS   L +LGM+D  F+ QW  +NS D+LS   +A+AF ++ Q   +S    +L+  
Sbjct: 1   MEISSIGGLTELGMEDSFFINQW-HMNSLDELSMLPLAAAFGENLQ---HSHCHPILNPK 56

Query: 92  KSVESSQIDENRPLKQIKITNWN 24
            S  +SQ   +RP+KQ+K  NW+
Sbjct: 57  TSTNTSQNSIDRPMKQLKPNNWS 79


>ref|XP_008236173.1| PREDICTED: transcription factor bHLH25-like [Prunus mume]
          Length = 344

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 34/90 (37%), Positives = 54/90 (60%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           M ISS   +++LGM+DP F+ QW  +NS D++S   +A+AF ++F   N S      +  
Sbjct: 1   MAISSIGGMSELGMEDPYFINQW-HLNSLDEVSMLPLAAAFGENF---NQSHFHPNFNLK 56

Query: 92  KSVESSQIDENRPLKQIKITNWNINSCKPE 3
            S++SS    +RP+KQ+K   W  +SCK +
Sbjct: 57  TSMDSSHSGIDRPMKQLKTDGW--SSCKTD 84


>ref|XP_009346450.1| PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694439082|ref|XP_009346451.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694439084|ref|XP_009346452.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694439087|ref|XP_009346453.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694439100|ref|XP_009346456.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694439102|ref|XP_009346457.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694439104|ref|XP_009346459.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694439107|ref|XP_009346460.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri]
          Length = 346

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 33/90 (36%), Positives = 50/90 (55%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEISS   L++LGM+DP F+ QW  +NS D+L    +A+   D+ Q   +S      +F 
Sbjct: 1   MEISSRGGLSELGMEDPFFINQWQYMNSLDELGMLPLAAEIGDNLQ---HSHFHPTFNFK 57

Query: 92  KSVESSQIDENRPLKQIKITNWNINSCKPE 3
             +++S    +RP KQ+K   W   SCK +
Sbjct: 58  TPIDNSHTGIDRPAKQLKTDGW--PSCKTD 85


>ref|XP_007200351.1| hypothetical protein PRUPE_ppa008130mg [Prunus persica]
           gi|462395751|gb|EMJ01550.1| hypothetical protein
           PRUPE_ppa008130mg [Prunus persica]
          Length = 344

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 33/90 (36%), Positives = 53/90 (58%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEISS   +++LGM+DP F+ QW  +NS D++S   +A+ F ++F   N S      +  
Sbjct: 1   MEISSIGGMSELGMEDPYFINQW-HMNSLDEVSMLPLAAPFGENF---NQSHFHPNFNLK 56

Query: 92  KSVESSQIDENRPLKQIKITNWNINSCKPE 3
            S++S     +RP+KQ+K   W  +SCK +
Sbjct: 57  TSMDSCHSGIDRPMKQLKTDGW--SSCKTD 84


>ref|XP_009378561.1| PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri] gi|694407669|ref|XP_009378562.1|
           PREDICTED: transcription factor bHLH18-like [Pyrus x
           bretschneideri]
          Length = 341

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 28/82 (34%), Positives = 47/82 (57%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEISS    ++LGM+DP F+ QW  +NS D+L    +A+ F ++ Q   +SQ   + +  
Sbjct: 1   MEISSRGGSSELGMEDPFFINQWQYMNSLDELGMLPLAAVFGENLQ---HSQFHPIFNLK 57

Query: 92  KSVESSQIDENRPLKQIKITNW 27
             ++++    +RP KQ+K   W
Sbjct: 58  TPIDNAHTAIDRPTKQLKTDGW 79


>gb|KDO67951.1| hypothetical protein CISIN_1g021208mg [Citrus sinensis]
          Length = 316

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 29/83 (34%), Positives = 46/83 (55%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEISS + L +LGM+D  F+ QW  +NS D+ +   IA+AF ++ Q +          +T
Sbjct: 1   MEISSIKGLPELGMEDLSFMNQWHMMNSIDEFNLLPIAAAFGENLQHS----------YT 50

Query: 92  KSVESSQIDENRPLKQIKITNWN 24
               ++    +RP KQ+K + WN
Sbjct: 51  HPSFNNNTGIDRPQKQLKTSTWN 73


>ref|XP_006486799.1| PREDICTED: transcription factor bHLH25-like [Citrus sinensis]
           gi|985460700|ref|XP_015388301.1| PREDICTED:
           transcription factor bHLH25-like [Citrus sinensis]
          Length = 316

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 29/83 (34%), Positives = 46/83 (55%)
 Frame = -1

Query: 272 MEISSFRCLADLGMDDPLFLQQWPSVNSFDDLSSGSIASAFSDDFQPNNNSQGQHVLDFT 93
           MEISS + L +LGM+D  F+ QW  +NS D+ +   IA+AF ++ Q +          +T
Sbjct: 1   MEISSIKGLPELGMEDLSFMNQWHMMNSIDEFNLLPIAAAFGENLQHS----------YT 50

Query: 92  KSVESSQIDENRPLKQIKITNWN 24
               ++    +RP KQ+K + WN
Sbjct: 51  HPSFNNNTGIDRPQKQLKTSTWN 73


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