BLASTX nr result
ID: Rehmannia27_contig00027677
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00027677
(4666 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 481 e-145
gb|KYP35708.1| Copia protein [Cajanus cajan] 458 e-143
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 464 e-142
gb|KYP75364.1| Copia protein [Cajanus cajan] 455 e-139
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 474 e-138
dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group] 455 e-138
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 441 e-137
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 468 e-137
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo... 438 e-135
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 457 e-134
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643... 449 e-133
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo... 432 e-133
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 452 e-131
ref|YP_514636.1| hypothetical protein OrsaiPp07 (mitochondrion) ... 425 e-131
gb|AMA06715.1| hypothetical protein (mitochondrion) [Oryza minuta] 423 e-130
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo... 450 e-130
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo... 450 e-130
ref|YP_002000554.1| orf490 (mitochondrion) [Oryza sativa Japonic... 422 e-130
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 446 e-129
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo... 422 e-129
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 481 bits (1237), Expect = e-145
Identities = 242/448 (54%), Positives = 310/448 (69%)
Frame = +1
Query: 4 RFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGDL 183
R+KARLVAKGFQQ G+++ DTFSPV+K TIR+VF+LA+T W I+ ID NNAFL G++
Sbjct: 551 RYKARLVAKGFQQYAGVEFTDTFSPVIKASTIRVVFTLAITYNWEIRQIDFNNAFLNGEI 610
Query: 184 KEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSCL 363
E VY+SQP G+V +S P +VCKL KA+YGLKQAP+ W KL+ L + GF +S SD+ L
Sbjct: 611 TETVYLSQPAGFVSTSHPQHVCKLQKALYGLKQAPRVWFHKLREALHTWGFISSTSDTSL 670
Query: 364 FFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYSP 543
F + T ++ LV +I +Q F+LK G V FLG + +
Sbjct: 671 FIYKHNGNFLLLLVYVDDLLITGNNVPLVQTLIQDLQNRFALKDLGLVKDFLGFEALRTT 730
Query: 544 AGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQYL 723
G+ L QSKY DLL KT M + P TP KLH F +PTLYRSTIGALQYL
Sbjct: 731 TGLHLTQSKYTTDLLIKTKMHSAKPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYL 790
Query: 724 TLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFADV 903
T TRPDI++ VNKLSQ+LQ PT HW AC+RVLRYLKG + G+ F P+ L+L+ + D
Sbjct: 791 TYTRPDIAFAVNKLSQYLQQPTELHWTACKRVLRYLKGIVHRGLHFTPASSLHLQVYTDA 850
Query: 904 VWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSFF 1083
WASS+DDR+ST+GYCVFLG NL WSS+KQ VVARSST+ EYR+LA A+ E+ W++S F
Sbjct: 851 DWASSIDDRRSTTGYCVFLGTNLFTWSSRKQPVVARSSTKAEYRALAHASXEVAWLRSLF 910
Query: 1084 AELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPSE 1263
+ELGIS++ VIWCDN A +LA+NPVFH+RTKHIEVDV ++RE+V K++ V ++PS
Sbjct: 911 SELGISLVNTPVIWCDNQGAGALAANPVFHSRTKHIEVDVXYVREQVLDKKLVVSYVPSV 970
Query: 1264 EQLADVLTKPIVAARFQNLCFKLSLQSS 1347
EQ AD+ TKP+ RFQ L KL+L S
Sbjct: 971 EQXADLFTKPLSIPRFQYLLTKLNLXVS 998
Score = 174 bits (440), Expect = 2e-40
Identities = 82/163 (50%), Positives = 111/163 (68%), Gaps = 9/163 (5%)
Frame = +3
Query: 4182 STHSMVTRSKLGVFKPKVY---------NVIHTNLEPKSVDDALLNSEWKAAMDAKFSAL 4334
S H M TRSK+G KPK+ +V ++ P +V AL N W M ++ AL
Sbjct: 456 SLHPMTTRSKVGTIKPKLLPDHITYLSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQAL 515
Query: 4335 IKNHTWDLVPFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSP 4514
++N+TW LVPF P M V+D KW+FRVKYN DG++ R+KARLVAKGFQQ G+++ DTFSP
Sbjct: 516 VRNNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTDTFSP 575
Query: 4515 VVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
V++ TI++VF+LA+T W I+ +D NNAFL G+ E VY+SQ
Sbjct: 576 VIKASTIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQ 618
Score = 84.7 bits (208), Expect = 8e-13
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 18/139 (12%)
Frame = +2
Query: 1730 TFHSIPLRLTRDNYHYWCLQILSTVKAHGFEDFLFGTVQIPPKLIDGEI--------NQE 1885
T H I ++L R+NY W Q+L + +AH + L G + PP+ N E
Sbjct: 39 TLHPISVKLDRNNYTIWRSQVLPSARAHRLDQILIGKLPKPPRFSQSTSVNSSQPTSNPE 98
Query: 1886 YMLWLRRDQLLFSWIIASLSESMMGYITRCNTSSDLWSILETVFRS--*SRASSTF---- 2047
Y W+ D L SWI+AS+SE+M G++ C TS+++WS+LE +F S S+ SST
Sbjct: 99 YDQWVILDXFLLSWILASISEAMYGHVVNCQTSAEVWSVLEKLFVSDYKSKNSSTTVHAT 158
Query: 2048 ----KGSASQLEER*FILQ 2092
+ A L+E ++LQ
Sbjct: 159 IIKERSEAISLQEVHYLLQ 177
Score = 77.8 bits (190), Expect = 1e-10
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Frame = +1
Query: 2200 LNARVEDLTLQDVQYALQTHEMRIQQLSQHSPTDSVHIQNVPAAHLANN--RSFPTDNSG 2373
+ R E ++LQ+V Y LQ+HE+R++QLS S D PAAH+ ++ T+N
Sbjct: 160 IKERSEAISLQEVHYLLQSHEIRLEQLSAASVIDVP-----PAAHITVGGVQNSNTNNGQ 214
Query: 2374 HRGGMTXXXXXXXXXXXXXXXXXXXXXXSCQICGKNNHIASKCFKRFDVNFTGVDLSSAQ 2553
RG + CQ+CGK H A KCF RFDV F AQ
Sbjct: 215 FRGSSSKNFRPRNVRNPQTSRIV------CQLCGKMGHTAMKCFHRFDVYFQSP--PRAQ 266
Query: 2554 AHFLSTTHELPKSP-------------SSGSFIP----MANHLQYQPTPQHASPASVFSD 2682
S+ H+ P+ P S+G +P +H Q T V D
Sbjct: 267 NQQFSSLHQ-PQQPQLRPPPLHQPQYYSTGPLVPSRPIQNSHQQLDSTSTSPHAYIVAPD 325
Query: 2683 YSLTGADPHWYMDSGASAHVTADLKNLSLQNAYTG 2787
++ W++DSGA+ H+T D L++ + Y G
Sbjct: 326 LD---SNTSWFVDSGATHHMTTDSNTLNVSDHYCG 357
>gb|KYP35708.1| Copia protein [Cajanus cajan]
Length = 493
Score = 458 bits (1178), Expect = e-143
Identities = 229/452 (50%), Positives = 308/452 (68%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
+R KARLVAKGFQQ G+DY +TFSPVVK TIR++ ++AV W ++ +DINNAFL G
Sbjct: 43 ERRKARLVAKGFQQTAGLDYEETFSPVVKSSTIRIILAIAVHLNWEVKQLDINNAFLNGY 102
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
LK+ VYM+QP G+ D +KPN+VCKL KAIYGLKQAP++W D LK LL GF ++SD+
Sbjct: 103 LKQTVYMNQPEGFADPTKPNHVCKLSKAIYGLKQAPRAWFDSLKNALLKWGFQNTKSDTS 162
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LF R +N T ++ K + + + FSLK G++ YFLG++VH
Sbjct: 163 LFTLRGKNHITFLLIYVDDIIVTGNNTKFLEAFVKQLNIVFSLKDLGQLHYFLGIEVHRD 222
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQY 720
G+ L QSKYI DLL+K ME +PC TP ++ I+ L +NPT +R IGALQY
Sbjct: 223 ATGMYLKQSKYIKDLLRKFKMENASPCPTPMVTGKQFTIEGEKL-KNPTEFRQAIGALQY 281
Query: 721 LTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFAD 900
LT TRPDI++ VNKLSQF+ +PT HW +R+LRYL+G++ + + + S L++ F+D
Sbjct: 282 LTNTRPDIAFSVNKLSQFMSSPTLDHWQGIKRILRYLQGTMHYCLHIKCSAYLDIAGFSD 341
Query: 901 VVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSF 1080
WA+SVDDRKS +G CVFLG L++WSS+KQ VV+RSSTE EYR+LA AE+ W +S
Sbjct: 342 ADWATSVDDRKSMAGQCVFLGDTLVSWSSRKQQVVSRSSTESEYRALADLAAEITWTRSL 401
Query: 1081 FAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPS 1260
EL + + ++WCDN+SA +LASNPV HARTKHIE DVH+IR++V +V V ++PS
Sbjct: 402 LTELKLPQPRKPILWCDNLSAKALASNPVMHARTKHIETDVHYIRDQVLQDKVIVAYVPS 461
Query: 1261 EEQLADVLTKPIVAARFQNLCFKLSLQSSPSL 1356
+Q+AD LTK + RF L KL + SPS+
Sbjct: 462 ADQIADCLTKALTHTRFNQLRDKLGVTPSPSV 493
Score = 129 bits (324), Expect = 1e-27
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = +3
Query: 4311 MDAKFSALIKNHTWDLVPFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGI 4490
M + AL NHTW LVP+Q ++D KWVF+ KY DG+++R KARLVAKGFQQ G+
Sbjct: 1 MHKEIQALNLNHTWTLVPYQAQESIIDSKWVFKTKYKADGTIERRKARLVAKGFQQTAGL 60
Query: 4491 DYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
DY +TFSPVV+ TI+++ ++AV W ++ +D+NNAFL G ++ VYM+Q
Sbjct: 61 DYEETFSPVVKSSTIRIILAIAVHLNWEVKQLDINNAFLNGYLKQTVYMNQ 111
>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
Length = 773
Score = 464 bits (1195), Expect = e-142
Identities = 231/450 (51%), Positives = 310/450 (68%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR KARLVA+GF Q PGIDYFDTFSPVVKP TIRL+ +LAV+ WS++ +D+ N FL GD
Sbjct: 264 DRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNGD 323
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+V+M+QP G+V+ + P VCKL KA+YGLKQAP++W KL++ LL GF +S++D+
Sbjct: 324 LEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTS 383
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LF T +P LV+ I ++T F+L+ G +SYFLG+Q
Sbjct: 384 LFIFHTATDILILLVYVDDILVTGSNPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQL 443
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQY 720
+ + LNQ KYI DLL +T MET P TP L + L D +P+ YR T+GALQY
Sbjct: 444 GSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQY 503
Query: 721 LTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFAD 900
+TLTRPDI++ VNK QF+ P+ HW A +R+LRYLKG+I G+ FQP+ + + ++D
Sbjct: 504 VTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMEXQGYSD 563
Query: 901 VVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSF 1080
WAS DDR+STSGYCVFLG NLI+WSS KQ +V++SS E EYR L S TAELVWI+S
Sbjct: 564 ADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSL 623
Query: 1081 FAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPS 1260
EL + P ++WCDN SA LA+NPVFH+R+KHIE+D+HFIREKV +E+++ ++PS
Sbjct: 624 LQELCLPTSP-PILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVPS 682
Query: 1261 EEQLADVLTKPIVAARFQNLCFKLSLQSSP 1350
+QLAD+ TK + +F NL KL++ P
Sbjct: 683 GDQLADIFTKHLPITQFCNLRSKLTVTYPP 712
Score = 170 bits (431), Expect = 8e-40
Identities = 78/154 (50%), Positives = 112/154 (72%)
Frame = +3
Query: 4182 STHSMVTRSKLGVFKPKVYNVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLV 4361
+TH MVTR+K G+ K + + V HT EP++ A N W AM++++ AL++N+TW LV
Sbjct: 180 NTHPMVTRAKSGIHKKRSFIVQHTT-EPRTYSQAFKNDSWVQAMNSEYQALLRNNTWSLV 238
Query: 4362 PFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKL 4541
P +V +W++++KY PDGS+DR KARLVA+GF Q PGIDYFDTFSPVV+ TI+L
Sbjct: 239 PPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRL 298
Query: 4542 VFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
+ +LAV+ WS++ +DV N FL GD +E+V+M+Q
Sbjct: 299 ILALAVSFQWSVRQLDVENGFLNGDLEEEVFMTQ 332
Score = 86.3 bits (212), Expect = 2e-13
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = +3
Query: 3747 SFYGSAPDYHFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYRCLSPS-GRI 3920
+ + P+YH L+ FGC C+P LRP+ Q KL +RST C FLGY+ AHKGY CL S RI
Sbjct: 38 TLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRI 97
Query: 3921 YVTRTVSFNEMEFPY 3965
Y++R V F+E FP+
Sbjct: 98 YISRNVIFHESSFPF 112
>gb|KYP75364.1| Copia protein [Cajanus cajan]
Length = 702
Score = 455 bits (1170), Expect = e-139
Identities = 221/456 (48%), Positives = 306/456 (67%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
+R KARLVAKGFQQ G+D+ +TF+PV+K T+R++ ++AV W ++ +DINNAFL G
Sbjct: 233 ERRKARLVAKGFQQTAGVDFDETFTPVIKASTVRIILAIAVHYNWEVRQMDINNAFLNGY 292
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
LKE V+M QP G+ D +KP++VCK +KAIYGLKQAP++W D+LK LL GF ++SDS
Sbjct: 293 LKETVFMHQPEGFTDPNKPHHVCKFIKAIYGLKQAPRAWFDRLKKALLRWGFQNTRSDSS 352
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LFF R +N T + + I + F+LK GK+ YFLG++VH
Sbjct: 353 LFFLRGENHITFLLIYVDDIIVTGSNTNFLQAFIKQLNVVFALKDLGKLHYFLGIEVHRD 412
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQY 720
G+ L Q KYI D+LKK M+ + C TP + + +NPT++R IGALQY
Sbjct: 413 SGGMFLKQIKYIADILKKFKMDRASSCPTPMVTGRSF-TNEGEPMKNPTIFRQAIGALQY 471
Query: 721 LTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFAD 900
LT +RPDI+Y VNKL Q++ APT HW +R+LRYL G+I H + + S L++ F+D
Sbjct: 472 LTNSRPDIAYSVNKLCQYMSAPTDDHWQGIKRILRYLCGTINHCLHIKSSADLDIAGFSD 531
Query: 901 VVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSF 1080
WA S+DDRKS +G CVFLG +LIAWSS+KQ VV+RSSTE EYR+L AE+ WIKS
Sbjct: 532 AYWAISIDDRKSIAGQCVFLGESLIAWSSRKQKVVSRSSTESEYRALVDLAAEVKWIKSL 591
Query: 1081 FAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPS 1260
E+ + + + ++WCDN+SA +LASNPV HAR+KHIEVD+HFIR++V ++ + ++PS
Sbjct: 592 LQEIKLPMPRKPILWCDNLSAKALASNPVMHARSKHIEVDIHFIRDQVLQNQISIAYVPS 651
Query: 1261 EEQLADVLTKPIVAARFQNLCFKLSLQSSPSLV*GV 1368
+Q+AD LTK + +RF L KL + SP+ + GV
Sbjct: 652 SDQIADCLTKALTHSRFSQLRDKLGVVQSPTRLRGV 687
Score = 108 bits (271), Expect = 2e-20
Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Frame = +3
Query: 3477 HFKSVVETQFLSHIQAFQCDWGGEFRPIATFLSLYSFXXXXXXXXXS------------- 3617
HFK + E QF I+ QCD GGEF+ + F S
Sbjct: 2 HFKKLTENQFNKKIKVVQCDGGGEFKGLQKISQESGFQLRMSCPYTSQQNGKAERKHRHV 61
Query: 3618 --------TYC*CWLVFSGPLQSSLLILVRCVCGCCLQNK*ASYPYTQQYLSFYGSAPDY 3773
L F S+ + L+ + ++NK Y PDY
Sbjct: 62 VELGLTLLAQAKMPLYFLWEAFSTAVFLINRLPTPIIRNK-------SPYSVLLNKEPDY 114
Query: 3774 HFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYRCLSPSGRIYVTRTVSFNE 3950
+ LKSFGCACYP ++P+N KLQ+ +TKC FLGYS +HKG++C++ +GRI+++R V FNE
Sbjct: 115 NNLKSFGCACYPCIKPYNAHKLQYHTTKCVFLGYSSSHKGFKCMNSNGRIFISRHVIFNE 174
Query: 3951 MEFPY 3965
EFP+
Sbjct: 175 HEFPF 179
Score = 77.8 bits (190), Expect = 9e-11
Identities = 33/69 (47%), Positives = 52/69 (75%)
Frame = +3
Query: 4437 DRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGD 4616
+R KARLVAKGFQQ G+D+ +TF+PV++ T++++ ++AV W ++ +D+NNAFL G
Sbjct: 233 ERRKARLVAKGFQQTAGVDFDETFTPVIKASTVRIILAIAVHYNWEVRQMDINNAFLNGY 292
Query: 4617 FQEDVYMSQ 4643
+E V+M Q
Sbjct: 293 LKETVFMHQ 301
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 474 bits (1220), Expect = e-138
Identities = 226/451 (50%), Positives = 316/451 (70%)
Frame = +1
Query: 4 RFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGDL 183
++KARLVAKGF Q G D+ +TFSPVVKP T+R+VF++A++R W+I+ +D+NNAFL GDL
Sbjct: 996 KYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDL 1055
Query: 184 KEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSCL 363
+E+V+M QP G++D PN VC+L KA+YGLKQAP++W +KL LLS GF +++SD L
Sbjct: 1056 QEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSL 1115
Query: 364 FFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYSP 543
F + N D + +I + + FSLK G+V YFLG+QV ++
Sbjct: 1116 FLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTN 1175
Query: 544 AGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQYL 723
G+ L+Q+KYI DLL+KT M C P TP KL + D E+ YRST+GALQY+
Sbjct: 1176 NGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYV 1235
Query: 724 TLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFADV 903
T+TRP++S+ VNK+ QF+Q PT HW +R+LRYL+G++ HG+ + S L+L F D
Sbjct: 1236 TITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDA 1295
Query: 904 VWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSFF 1083
WAS +DDR+STSG+CVFLGPNLI+W SKKQ +V+RSS E+EYRSLA AE+ W++S
Sbjct: 1296 DWASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLL 1355
Query: 1084 AELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPSE 1263
+EL + + ++WCDN+S + L++NPV HARTKHIE+D++F+REKV KEVEVR +PS
Sbjct: 1356 SELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVPSA 1415
Query: 1264 EQLADVLTKPIVAARFQNLCFKLSLQSSPSL 1356
+QLADVLTK + + +F KL +++ +L
Sbjct: 1416 DQLADVLTKTVSSTQFIEFRHKLRIENLSTL 1446
Score = 190 bits (483), Expect(3) = 7e-82
Identities = 99/234 (42%), Positives = 139/234 (59%), Gaps = 5/234 (2%)
Frame = +3
Query: 2889 YILCVPDITKNLLSISQFTKDNKVFIEFHHDSCFVKDKLTHQTLLKGSLKGGLNQLDLS- 3065
++L VP ITKNLLS+S+F KDNKVF EFH DSCFVKD++T L+ G ++ GL D S
Sbjct: 429 HLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLYAFDSSH 488
Query: 3066 -PLRSSYNSARLPXXXXXXXXXXXXXAHCD--VNLWHKRLGHCSTVVLTNTLKQINVPH- 3233
LR + + ++ P +LWHKRLGH S + N L + NV H
Sbjct: 489 LALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVLSKCNVAHI 548
Query: 3234 SSSKLEFCHACQLGKLKSISFPLTVSKTTAPFQLIYSDVWGPSSTIIGAGYKYYTHFVDD 3413
+ FC +C LGK+ F L+ + T P +LI+ D+WGP+ + +GY+YY HFVD
Sbjct: 549 NKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDA 608
Query: 3414 FTNYTGIYPLQTKGEAITALKHFKSVVETQFLSHIQAFQCDWGGEFRPIATFLS 3575
F+ ++ I+ L+ K EAI +FK+ VE QF I++ Q DWGGEFR ++L+
Sbjct: 609 FSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLA 662
Score = 103 bits (256), Expect(3) = 7e-82
Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +3
Query: 3753 YGSAPDYHFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYRCLSPSGRIYVT 3929
+ S PDY FLK FGC+C+P LRP+N KLQ+RS +C FLGYSL HKGY+C+S +GR+Y++
Sbjct: 736 FKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYIS 795
Query: 3930 RTVSFNEMEFPY 3965
V FNE FPY
Sbjct: 796 HDVIFNETSFPY 807
Score = 63.9 bits (154), Expect(3) = 7e-82
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1
Query: 3568 SCPYTHSQNGKPERKHQHIVNVGLSFLAHSNLPYSFW*DAFVVVVFRINRLPTPTLNNIF 3747
SCP+T QNG ERKH+ IV GL+ L ++LP FW ++F VV+ NRLPT L++
Sbjct: 671 SCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKC 730
Query: 3748 PSMVL 3762
P VL
Sbjct: 731 PIEVL 735
Score = 167 bits (423), Expect = 5e-38
Identities = 78/154 (50%), Positives = 111/154 (72%)
Frame = +3
Query: 4182 STHSMVTRSKLGVFKPKVYNVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLV 4361
+TH M+TR+K G+ KPK++ I EP SV AL EWK AM A++ AL +N+TW LV
Sbjct: 912 NTHPMITRAKSGIVKPKIF--IAAIREPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLV 969
Query: 4362 PFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKL 4541
P + + KWV++ K NPDG+V ++KARLVAKGF Q G D+ +TFSPVV+ T+++
Sbjct: 970 PLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRV 1029
Query: 4542 VFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
VF++A+++ W+I+ +DVNNAFL GD QE+V+M Q
Sbjct: 1030 VFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQ 1063
Score = 92.8 bits (229), Expect = 3e-15
Identities = 84/309 (27%), Positives = 125/309 (40%), Gaps = 41/309 (13%)
Frame = +1
Query: 2155 ILNGLGMEYESIVVNLNARVEDLTLQDVQYALQTHEMRIQQLSQH---SPTDSV------ 2307
IL+GL +YES V ++ R +D ++++++ L HE R+++ + SP+ V
Sbjct: 168 ILDGLPNDYESFVTSVILRNDDFSVEEIEALLMAHESRVEKNNNSLDSSPSAHVASSNAV 227
Query: 2308 ----------HIQNVPAAHLANNRSFPTDNS-GHRGGMTXXXXXXXXXXXXXXXXXXXXX 2454
+ N +H N F G RGG
Sbjct: 228 EKGNRFKQDYYAANSQGSHSGYNGGFGRGGDFGRRGGFYGGRGFNWNYNGRSNRGGFRGR 287
Query: 2455 XS--------------------CQICGKNNHIASKCFKRFDVNFTGVDLSSAQAHFLSTT 2574
+ CQ+CGK H+ ++C+ RFD F
Sbjct: 288 GNKGSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTF---------------- 331
Query: 2575 HELPKSPSSGSFIPMANHLQYQPTPQHASPAS-VFSDYSLTGADPHWYMDSGASAHVTAD 2751
++P++ SS + P A + + P P S VFSD +WY DSGAS HVT +
Sbjct: 332 -QVPQNLSSRNSSPRA-YYSFSPQVNGVIPTSEVFSD-------DNWYPDSGASNHVTPN 382
Query: 2752 LKNLSLQNAYTGNEKLTIGNGSKLGITHIGSSLISHPSSFKPLVLNISFVFLILPKIYSP 2931
+NL + G ++ +GNG+ L I HIG S P S KPL+LN L +P I
Sbjct: 383 PENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLN---HLLHVPSITKN 439
Query: 2932 SLSSQKTIK 2958
LS K K
Sbjct: 440 LLSVSKFAK 448
>dbj|BAH94406.1| Os08g0544300 [Oryza sativa Japonica Group]
Length = 821
Score = 455 bits (1170), Expect = e-138
Identities = 219/449 (48%), Positives = 310/449 (69%), Gaps = 2/449 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR+KARLVAKGF+Q GIDY DTFSPVVK TIR+V SLAV+RGWS++ +D+ NAFL+G
Sbjct: 365 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGV 424
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+VYM QP GY S PN VCKL KA+YGLKQAP++W +L L LGF S++D+
Sbjct: 425 LEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTS 484
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LFF + P + ++ + F+LK G + YFLG++VH
Sbjct: 485 LFFYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKV 544
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLF--ENPTLYRSTIGAL 714
G++L+Q KY DLL++ M C P +TP ++KL + + +L ++ T YRS +GAL
Sbjct: 545 KDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGAL 604
Query: 715 QYLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESF 894
QYLTLTRPDIS+ +NK+ QFL APTT+HW A +R+LRY+K ++ G+ F +P L + F
Sbjct: 605 QYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGF 664
Query: 895 ADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIK 1074
+D WA S DDR+ST G+ VFLGPNL++WS++KQ+ V+RSSTE EY++LA+ATAE++W++
Sbjct: 665 SDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQ 724
Query: 1075 SFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFL 1254
+ ELG+ + +WCDN+ A L++NP+FHARTKHIEVD HF+RE+VA K +E+ ++
Sbjct: 725 TLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYI 784
Query: 1255 PSEEQLADVLTKPIVAARFQNLCFKLSLQ 1341
+++Q+AD TK I + + L+L+
Sbjct: 785 STKDQVADGFTKAIPVRQMEMFKNNLNLE 813
Score = 164 bits (416), Expect = 8e-38
Identities = 83/155 (53%), Positives = 112/155 (72%), Gaps = 7/155 (4%)
Frame = +3
Query: 4200 TRSKLGVFKPKVYNV-------IHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDL 4358
TR + G+ K KVY ++ EP+S+++A+ N WK AMDA++ ALI+N TW L
Sbjct: 279 TRLQSGIRKEKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIENKTWHL 338
Query: 4359 VPFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIK 4538
VP Q V+D KWV++VK DGS+DR+KARLVAKGF+Q GIDY DTFSPVV+ TI+
Sbjct: 339 VPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIR 398
Query: 4539 LVFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
+V SLAV++GWS++ +DV NAFL+G +E+VYM Q
Sbjct: 399 IVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQ 433
Score = 81.3 bits (199), Expect(2) = 9e-14
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +3
Query: 3765 PDYHFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYRCLS-PSGRIYVTRTV 3938
P+Y L+ FGCA +P LRP+N+ KL FRS +C FLGYS HKG++CL +GR+YV+R V
Sbjct: 39 PNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDV 98
Query: 3939 SFNEMEFPY 3965
+F+E FP+
Sbjct: 99 TFDESIFPF 107
Score = 26.9 bits (58), Expect(2) = 9e-14
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 3661 LPYSFW*DAFVVVVFRINRLPTPTLNNIFP 3750
+P FW +A + + INR P+ +N P
Sbjct: 1 MPIKFWDEAVLAAAYLINRTPSKVINFACP 30
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 441 bits (1135), Expect = e-137
Identities = 221/453 (48%), Positives = 301/453 (66%)
Frame = +1
Query: 7 FKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGDLK 186
+KARLVAKGF Q PGIDY +TFSPV+KP T+RLV SLAV++GWS++ +D+NNAFL G L
Sbjct: 18 YKARLVAKGFHQRPGIDYSETFSPVIKPTTVRLVLSLAVSQGWSLRQLDVNNAFLQGTLT 77
Query: 187 EDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSCLF 366
EDV+MSQP G++D P++VCKL KAIYGLKQAP++W +L LL GF S +D+ LF
Sbjct: 78 EDVFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWYHELCQFLLQFGFINSIADTSLF 137
Query: 367 FQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYSPA 546
+ T ++ + I + FSLK G ++YFLG++V
Sbjct: 138 IFNNHDTILYLLVYVDDIIITGNNVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVTSHTN 197
Query: 547 GILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQYLT 726
G+ L+Q KYI DLL +T+M P TP + L +Q + +PT YR+ +G+LQYL+
Sbjct: 198 GLFLSQRKYIADLLNRTHMTEAKPAPTPLATSPILTLQSGTPLSDPTEYRTVVGSLQYLS 257
Query: 727 LTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFADVV 906
LTRPDI+Y VNKLSQF+ PT+ HW A +R+LRYL G++ H I + + L L +F+D
Sbjct: 258 LTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTSPLALHAFSDSD 317
Query: 907 WASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSFFA 1086
WA + DD STS Y ++LG N I+WSSKKQ VARSSTE EYRS+AS AE+ WI S
Sbjct: 318 WAGNKDDFTSTSAYIIYLGHNPISWSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLT 377
Query: 1087 ELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPSEE 1266
ELG+++ + VI+CDN+ A +L SNPVFH+R KH+ +D HFIRE+V + + V + + +
Sbjct: 378 ELGVTLPQQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASD 437
Query: 1267 QLADVLTKPIVAARFQNLCFKLSLQSSPSLV*G 1365
QLAD LTKP+ +F +L K+ L PS++ G
Sbjct: 438 QLADALTKPLARPQFDSLKAKIGLAPRPSILRG 470
Score = 96.3 bits (238), Expect = 6e-17
Identities = 44/67 (65%), Positives = 56/67 (83%)
Frame = +3
Query: 4443 FKARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGDFQ 4622
+KARLVAKGF Q PGIDY +TFSPV++ T++LV SLAV++GWS++ +DVNNAFL G
Sbjct: 18 YKARLVAKGFHQRPGIDYSETFSPVIKPTTVRLVLSLAVSQGWSLRQLDVNNAFLQGTLT 77
Query: 4623 EDVYMSQ 4643
EDV+MSQ
Sbjct: 78 EDVFMSQ 84
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 468 bits (1205), Expect = e-137
Identities = 233/450 (51%), Positives = 312/450 (69%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR KARLVA+GF Q PGIDYFDTFSPVVKP TIRL+ +LAV+ WS++ +D+ NAFL GD
Sbjct: 917 DRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGD 976
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+V+M+QP G+V+ + P VCKL KA+YGLKQAP++W KL++ LL GF +S++D+
Sbjct: 977 LEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTS 1036
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LF T +P LV+ I ++T F+L+ G +SYFLG+Q
Sbjct: 1037 LFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQL 1096
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQY 720
+ + LNQ KYI DLL +T MET P TP L + L D +P+ YR T+GALQY
Sbjct: 1097 GSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQY 1156
Query: 721 LTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFAD 900
+TLTRPDI++ VNK QF+ P+ HW A +R+LRYLKG+I G+ FQP+ + L+ ++D
Sbjct: 1157 VTLTRPDIAFAVNKACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSD 1216
Query: 901 VVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSF 1080
WAS DDR+STSGYCVFLG NLI+WSS KQ +V++SS E EYR L S TAELVWI+S
Sbjct: 1217 ADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSL 1276
Query: 1081 FAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPS 1260
EL + P ++WCDN SA LA+NPVFH+R+KHIE+D+HFIREKV +E+++ ++PS
Sbjct: 1277 LQELCLPTSP-PILWCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQICYVPS 1335
Query: 1261 EEQLADVLTKPIVAARFQNLCFKLSLQSSP 1350
+QLAD+ TK + +F NL KL++ P
Sbjct: 1336 GDQLADIFTKHLPITQFCNLRSKLTVTYPP 1365
Score = 196 bits (499), Expect(3) = 3e-89
Identities = 128/384 (33%), Positives = 191/384 (49%), Gaps = 26/384 (6%)
Frame = +3
Query: 2892 ILCVPDITKNLLSISQFTKDNKVFIEFHHDSCFVKDKLTHQTLLKGSLKGGLNQLDLS-P 3068
+L VP ++ NL+S+S+F DN VF E H FVKD++T + LLKG L+ GL + S P
Sbjct: 405 VLHVPHLSTNLISVSKFXTDNAVFFEXHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSP 464
Query: 3069 LRSSYNSARLPXXXXXXXXXXXXXAHCDVNLWHKRLGHCSTVVLTNTLKQIN--VPHSSS 3242
R+ + + D +WH RLGH + +L+ L N V +
Sbjct: 465 PRAFVTTG----------------SFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQIN 508
Query: 3243 KLEFCHACQLGKLKSISFPLTVSKTTAPFQLIYSDVWGPSSTIIGAGYKYYTHFVDDFTN 3422
K+ C C L K S+ + L+ S + P LI++D+WGP+ + G +Y+ F+DD++
Sbjct: 509 KIAPCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSR 568
Query: 3423 YTGIYPLQTKGEAITALKHFKSVVETQFLSHIQAFQCDWGGEFRPIATFLSLYSFXXXXX 3602
+T IY L TK +A+ + F+ +VE Q + I+ Q D GGEF +L +
Sbjct: 569 HTWIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFS 628
Query: 3603 XXXXSTYC*CWLVFSGPLQSSLLILVR----CVCGCCLQNK*ASYPY-TQQYL------- 3746
+G + + LV + L +K +Y + T YL
Sbjct: 629 CPHTPQQ-------NGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAK 681
Query: 3747 ---------SFYGSAPDYHFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYR 3896
+ + P+YH L+ FGC C+P LRP+ Q KL +RST C FLGY+ AHKGY
Sbjct: 682 LLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYL 741
Query: 3897 CLSPS-GRIYVTRTVSFNEMEFPY 3965
CL S RIY++R V F+E FP+
Sbjct: 742 CLDVSTNRIYISRNVIFHESSFPF 765
Score = 102 bits (253), Expect(3) = 3e-89
Identities = 79/285 (27%), Positives = 118/285 (41%), Gaps = 27/285 (9%)
Frame = +1
Query: 2092 DYFLHMQGLADNIQVAGM-------VIHILNGLGMEYESIVVNLNARVEDLTLQDVQYAL 2250
DY L M+ ++DN+ G ++ +L GLG +Y SIV +L AR +DL+L V L
Sbjct: 149 DYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVHSIL 208
Query: 2251 QTHEMRIQQLSQHSPTD----SVHIQNVPAA-----------HLANNRSFPTDNSGHRGG 2385
THE R+ L SPTD S H+ +VP+ H + +S +R
Sbjct: 209 LTHEQRLH-LQHSSPTDPSFASAHMASVPSRQPNRPHQPRHYHHPSRPQHQASSSSNRPP 267
Query: 2386 MTXXXXXXXXXXXXXXXXXXXXXXS----CQICGKNNHIASKCFKRFDVNFTGVD-LSSA 2550
S CQ+CGK H A KC+ RFD+N+ G + + A
Sbjct: 268 TRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGHTAIKCYHRFDINYQGNNGVPLA 327
Query: 2551 QAHFLSTTHELPKSPSSGSFIPMANHLQYQPTPQHASPASVFSDYSLTGADPHWYMDSGA 2730
QA F +H P H W+ D+GA
Sbjct: 328 QAPF--------------------SHAMLAAAPDHQDS---------------WFFDTGA 352
Query: 2731 SAHVTADLKNLSLQNAYTGNEKLTIGNGSKLGITHIGSSLISHPS 2865
+ H++ + LS Y+G +++TIG+G+ L I + G+ PS
Sbjct: 353 THHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPS 397
Score = 83.6 bits (205), Expect(3) = 3e-89
Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +2
Query: 1736 HSIPLRLTRDNYHYWCLQILSTVKAHGFEDFLFGTVQIPPK-LIDGEINQEYMLWLRRDQ 1912
H++P++L R NY W Q+ + V A+GFED++ GT PPK L G++N +++ W R D+
Sbjct: 28 HALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTGDLNPDFVQWRRFDR 87
Query: 1913 LLFSWIIASLSESMMGYITRCNTSSDLWSILETVFRS*SRA 2035
++ SW+ ++L+ +MG I TS + W L +F + S+A
Sbjct: 88 MVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKA 128
Score = 171 bits (433), Expect = 3e-39
Identities = 79/154 (51%), Positives = 113/154 (73%)
Frame = +3
Query: 4182 STHSMVTRSKLGVFKPKVYNVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLV 4361
+TH MVTR+K G+ K + + V HT EP++ A N W AM++++ AL++N+TW LV
Sbjct: 833 NTHPMVTRAKSGIHKKRSFIVQHTT-EPRTYSQASKNDSWVQAMNSEYQALLRNNTWSLV 891
Query: 4362 PFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKL 4541
P +V +W++++KY PDGS+DR KARLVA+GF Q PGIDYFDTFSPVV+ TI+L
Sbjct: 892 PPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRL 951
Query: 4542 VFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
+ +LAV+ WS++ +DV NAFL GD +E+V+M+Q
Sbjct: 952 ILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQ 985
>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 538
Score = 438 bits (1127), Expect = e-135
Identities = 234/455 (51%), Positives = 311/455 (68%), Gaps = 5/455 (1%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
+++KARLVAKGF Q G DY +TFSPVVKP+TIRL+ +LA+T WSIQ +D+NNAFL G+
Sbjct: 83 NKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNGN 142
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+VYMSQP G+ +SS VCKL KAIYGLKQAP++W DKLK L L F S+ D
Sbjct: 143 LQEEVYMSQPPGF-ESSDKTLVCKLHKAIYGLKQAPRAWFDKLKTTLFQLNFQISKCDPS 201
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LF N T ++ + II + +AFSLK G++ +FLG++V +
Sbjct: 202 LFVYSHDNNVIYILVYVDDIIITGNNSSTLQNIIAQLNSAFSLKDLGRLDFFLGIEVKSN 261
Query: 541 PAGIL-LNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQ 717
G L L QSKYI DLL +TNME NP ++P KL S F + TLYRS +GALQ
Sbjct: 262 TDGSLTLTQSKYIRDLLNRTNMENSNPISSPMVSGCKLSRTGSEKFLDVTLYRSVVGALQ 321
Query: 718 YLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPR---LNLE 888
Y T+TRP+IS+ VNK+ QF+ P HW A +R+LRYLKG++ G+ QP+P L++
Sbjct: 322 YATITRPEISFSVNKVCQFMSNPLEQHWSAVKRILRYLKGTMFLGLHLQPAPSNSPLSIR 381
Query: 889 SFADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVW 1068
++ D WAS DDR+STSG +F+GPNLI+W SKKQ+VVARSS E EYRSLA ATAE++W
Sbjct: 382 AYCDADWASDPDDRRSTSGASIFVGPNLISWWSKKQTVVARSSAEAEYRSLALATAEVLW 441
Query: 1069 IKSFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVR 1248
I++ +EL +S V++CDN+S ++LA NPV HARTKH+E+D+ F+REKVA+ + V
Sbjct: 442 IQTLLSELHVS-HHTPVVYCDNMSTVALAHNPVLHARTKHMELDLFFVREKVAANSLHVV 500
Query: 1249 FLPSEEQLADVLTKPIVAARFQNLCFKLSL-QSSP 1350
+P+ +Q AD+LTK + +RF L KL L SSP
Sbjct: 501 HVPAIDQYADILTKALSPSRFCELRTKLKLVDSSP 535
Score = 164 bits (415), Expect = 5e-39
Identities = 79/151 (52%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Frame = +3
Query: 4194 MVTRSKLGVFKPKVY-NVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLVPFQ 4370
M TR+K G+ KP++ ++ T++EPK+ AL + W AAM +++AL+ N TW LV
Sbjct: 1 MTTRAKAGIVKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLP 60
Query: 4371 PHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVFS 4550
P+ + KWVFR+K N DG+V+++KARLVAKGF Q G DY +TFSPVV+ +TI+L+ +
Sbjct: 61 PNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILT 120
Query: 4551 LAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
LA+T WSIQ +DVNNAFL G+ QE+VYMSQ
Sbjct: 121 LALTHHWSIQQLDVNNAFLNGNLQEEVYMSQ 151
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 457 bits (1175), Expect = e-134
Identities = 225/450 (50%), Positives = 309/450 (68%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR+KARLVA+GF Q G++YF+TFSPVVK TIR++ ++A++ WS+ +D+ NAFL+GD
Sbjct: 770 DRYKARLVAQGFTQTLGLBYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGD 829
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E V+M QP G+++S P++VCKL KA+YGLKQAP++W +KL LL GF S++DS
Sbjct: 830 LEEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSS 889
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
+F + T V+ I + ++F+L+ G V+YFLG++V S
Sbjct: 890 MFIHHSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRS 949
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQY 720
L+Q KY DLL +T M P TP L Q L D F + TLYRST+GALQY
Sbjct: 950 GTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQY 1009
Query: 721 LTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFAD 900
LTLTRPDIS+ VNK QF+ PTT+HW A +R+LRYLKG++++GI Q S L++ + D
Sbjct: 1010 LTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTD 1069
Query: 901 VVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSF 1080
WAS DDR+ST GY +FLGPNL++WSS KQ VV+RSS E EYR+LASAT+E++WI+
Sbjct: 1070 ADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYV 1129
Query: 1081 FAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPS 1260
EL +S ++WCDN SA LA+NPVFHARTKHIE+D+HFIR+ V K++ +++LPS
Sbjct: 1130 LQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQLVIQYLPS 1189
Query: 1261 EEQLADVLTKPIVAARFQNLCFKLSLQSSP 1350
EQ+AD+ TK I +++F + KLS+ SP
Sbjct: 1190 AEQVADIFTKHISSSQFLSFRTKLSVVPSP 1219
Score = 160 bits (406), Expect = 4e-36
Identities = 75/152 (49%), Positives = 110/152 (72%)
Frame = +3
Query: 4188 HSMVTRSKLGVFKPKVYNVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLVPF 4367
H MVTR+K G+ K KVY H + EP + A+ +S W AM+ +FSAL +N+TW LVP
Sbjct: 688 HPMVTRAKNGISKKKVYFSSHIS-EPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPP 746
Query: 4368 QPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVF 4547
+ ++ KWV+++KY PDG+VDR+KARLVA+GF Q G++YF+TFSPVV+ TI+++
Sbjct: 747 PSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFETFSPVVKASTIRIIL 806
Query: 4548 SLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
++A++ WS+ +DV NAFL+GD +E V+M Q
Sbjct: 807 AVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQ 838
Score = 101 bits (252), Expect = 6e-18
Identities = 44/81 (54%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = +3
Query: 3729 YTQQYLSFYGSAPDYHFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYRCLS 3905
Y + +G +P+YH K FGC CYPY+RP+N++KL +RS++C FLGYS HKGY CL+
Sbjct: 534 YQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLN 593
Query: 3906 P-SGRIYVTRTVSFNEMEFPY 3965
P +GR+YVTR V F+E FP+
Sbjct: 594 PLTGRLYVTRHVVFHETVFPF 614
Score = 83.2 bits (204), Expect = 3e-12
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Frame = +2
Query: 1736 HSIPLRLTRDNYHYWCLQILSTVKAHGFEDFLFGTVQIPP-KLIDGEINQEYMLWLRRDQ 1912
H++P++L R+NY W Q+ + V A+GFED + G PP K GE N ++++W R D+
Sbjct: 137 HALPIKLDRNNYILWRTQMENVVFANGFEDHIEGLKICPPQKTSSGETNPDFVMWRRFDR 196
Query: 1913 LLFSWIIASLSESMMGYITRCNTSSDLWSILETVFRS*SRA---------SSTFKGSASQ 2065
++ SWI +SL+ +MG I +S W LE +F + SRA +T KGS +
Sbjct: 197 MILSWIYSSLTPEIMGQIVGYQSSHAAWFALERIFSASSRARVMQLRLEFQTTRKGSLTM 256
Query: 2066 LE 2071
+E
Sbjct: 257 ME 258
Score = 78.2 bits (191), Expect = 9e-11
Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 9/280 (3%)
Frame = +1
Query: 2050 RLSF-TARRKVIYPSDYFLHMQGLADNIQVAG-------MVIHILNGLGMEYESIVVNLN 2205
RL F T R+ + +Y L ++ LADN+ G ++ +L GLG +Y SIV +L
Sbjct: 243 RLEFQTTRKGSLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLT 302
Query: 2206 ARVEDLTLQDVQYALQTHEMRIQQLSQHSPTDSVHIQNVPAAHLANNRSFPTDNSGHRGG 2385
A Y+ + Q +SV NV +A+LA + +N G
Sbjct: 303 APF---------YSPMKQRLSFQ--------NSVAEDNVISANLATPQYQHFNNKRSSGQ 345
Query: 2386 MTXXXXXXXXXXXXXXXXXXXXXXSCQICGKNNHIASKCFKRFDVNFTGVDLSSAQAHFL 2565
CQ+CGK H +C+ RFD+NF G
Sbjct: 346 NRQSGFNTRRGTNGGRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQGY---------- 395
Query: 2566 STTHELPKSPSSGSFIPMANHLQYQPTPQHASPASVFSDYSLTGADPHWYMDSGASAHVT 2745
+P+ + + + Q ASP+++ +D W+ D+GA+ H++
Sbjct: 396 --------NPNMDTVQTNKPNAKNQVQAMMASPSTI--------SDEAWFFDTGATHHLS 439
Query: 2746 ADLKNLSLQNAYTGNEKLTIGNG-SKLGITHIGSSLISHP 2862
+ LS Y GN+K+ +GN S TH S S P
Sbjct: 440 QSIDPLSDVQPYMGNDKVIVGNAFSSYLATHGIKSQFSCP 479
Score = 73.2 bits (178), Expect = 3e-09
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +1
Query: 3568 SCPYTHSQNGKPERKHQHIVNVGLSFLAHSNLPYSFW*DAFVVVVFRINRLPTPTLNNIF 3747
SCPYT QNG+ ERK +HI+ GL+ LA ++LP+ FW AF +F INRLPT LN
Sbjct: 477 SCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTIFLINRLPTKVLNYQS 536
Query: 3748 PSMVL 3762
P +L
Sbjct: 537 PFQIL 541
>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
Length = 1003
Score = 449 bits (1155), Expect = e-133
Identities = 220/451 (48%), Positives = 307/451 (68%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
+R+KARLVAKGF Q PGIDY +TFSPVVK TIR + SLA R W I+ +DI+NAFL+G
Sbjct: 552 ERYKARLVAKGFSQQPGIDYNETFSPVVKATTIRTILSLATVRKWPIRQLDISNAFLHGY 611
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L ED+YM QP G++DS P+ VCKL K++YGL+QAP++W +L LL LGF S++D+
Sbjct: 612 LDEDIYMDQPPGFIDSVHPDYVCKLQKSLYGLRQAPRAWFQRLSNFLLQLGFKASKADTS 671
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LF + N T D + + +++AF ++ G+++YFLG++V +
Sbjct: 672 LFIYQDGNIQCFILVYVDDILLTCSDFSKLEFFLHALKSAFPVRDLGRLTYFLGIEVIPT 731
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQY 720
GILL+Q KY+ DLL + NM P TP L + +R +G LQY
Sbjct: 732 SHGILLSQQKYVRDLLLQFNMNDSKPTLTPMATTPPLSKHGDEILATADQFRKLVGTLQY 791
Query: 721 LTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESFAD 900
+TLTRPD+S+ VNKL+QF+ PT +HW A +R+LRYL G+ + G+ ++L+ F+D
Sbjct: 792 VTLTRPDVSFAVNKLAQFMHHPTAAHWIAAKRLLRYLHGTASMGLFLSIDSPISLQCFSD 851
Query: 901 VVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIKSF 1080
WA DDRKSTSGY ++LG NLI+WSSKKQS VARSSTE EYRS+A AT+E++WI S
Sbjct: 852 SDWAGCPDDRKSTSGYAIYLGNNLISWSSKKQSTVARSSTESEYRSIAHATSEIMWILSL 911
Query: 1081 FAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFLPS 1260
+ELG+S+LP + +WCDNI AI L SNPVFHARTKHIE+DVHF+R++V K+++++F+
Sbjct: 912 LSELGVSVLP-ATLWCDNIGAIYLTSNPVFHARTKHIELDVHFVRDQVQHKKIQIKFISG 970
Query: 1261 EEQLADVLTKPIVAARFQNLCFKLSLQSSPS 1353
++Q+AD++TKP+ + F KL LQ+ P+
Sbjct: 971 QDQIADIMTKPLGSRLFLRHRDKLRLQAPPT 1001
Score = 89.4 bits (220), Expect(2) = 3e-26
Identities = 86/303 (28%), Positives = 132/303 (43%), Gaps = 16/303 (5%)
Frame = +1
Query: 2089 SDYFLHMQGLADNIQVAGMVIH-------ILNGLGMEYESIVVNLNARVEDLTLQDVQYA 2247
S Y + L D +QVAG + I +G+EY +I+ LN R E + ++
Sbjct: 142 SAYLQRAKQLKDELQVAGRPLSTAEFNAIIYRNIGIEYHNIITALNLRAEPVPFHELHGQ 201
Query: 2248 LQTHEMRIQQLSQHSPTDSVHIQNVPAAH-LANNRSFPTDNSGHRGGMTXXXXXXXXXXX 2424
L HE+ ++ S P + + P+ + L S P N+ + +
Sbjct: 202 LVAHEILLK--SCLDPPQANMVSRQPSNNFLPPLLSTPNTNTSWQKNSSSKAKGP----- 254
Query: 2425 XXXXXXXXXXXSCQICGKNNHIASKCFKRF-----DVNFTGVDLSSAQAHFLSTTHELPK 2589
CQICG NH A KC +R+ N V A++ S ++ P
Sbjct: 255 ------------CQICGYRNHTADKCRRRYHRSNPSQNQNQVRYPPPMANY-SYSYPSPS 301
Query: 2590 ---SPSSGSFIPMANHLQYQPTPQHASPASVFSDYSLTGADPHWYMDSGASAHVTADLKN 2760
SPSS P + Y P+P A+ ++ +L W+ D+ A+ HVT D+++
Sbjct: 302 PYPSPSSHFSSPQSVTNYYSPSPPMANYSAASPTQNL------WHPDTAANYHVTPDIQS 355
Query: 2761 LSLQNAYTGNEKLTIGNGSKLGITHIGSSLISHPSSFKPLVLNISFVFLILPKIYSPSLS 2940
LS Y G++ L +GNG L I+H G+ +I PSS L L + L +PKI LS
Sbjct: 356 LSATTEYQGHDNLHVGNGVGLPISHTGTVVI--PSSNGALQLKHT---LCVPKIVKNLLS 410
Query: 2941 SQK 2949
QK
Sbjct: 411 VQK 413
Score = 60.8 bits (146), Expect(2) = 3e-26
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Frame = +2
Query: 1736 HSIPLRLTRDNYHYWCLQILSTVKAHGFEDFLFGTVQIPPKLIDGEINQE-------YML 1894
HS ++L NY W Q + H F + G+ P K I N E Y
Sbjct: 17 HSFSVKLKPTNYLAWKTQFQPLLNYHNFNHLIDGSSP-PSKTIKSPSNPEVDIPNPDYQS 75
Query: 1895 WLRRDQLLFSWIIASLSESMMGYITRCNTSSDLWSILETVFRS*SR 2032
W ++DQLL SW+ +SLSE + +I NTS ++W L F S S+
Sbjct: 76 WFKQDQLLHSWLHSSLSEEVFSHIVGLNTSHEVWQALAQAFGSLSQ 121
Score = 114 bits (286), Expect = 5e-22
Identities = 66/168 (39%), Positives = 90/168 (53%)
Frame = +3
Query: 2886 KYILCVPDITKNLLSISQFTKDNKVFIEFHHDSCFVKDKLTHQTLLKGSLKGGLNQLDLS 3065
K+ LCVP I KNLLS+ +FT DN F EF FVKD++T + LL+G + G+ L L
Sbjct: 396 KHTLCVPKIVKNLLSVQKFTTDNCCFFEFWPHCFFVKDQVTKKILLQGPSEDGIYSLKL- 454
Query: 3066 PLRSSYNSARLPXXXXXXXXXXXXXAHCDVNLWHKRLGHCSTVVLTNTLKQINVPHSSSK 3245
PL+S SA +P WH LGH ++ +K N+P SS +
Sbjct: 455 PLKSVM-SATVPSFSD----------------WHSALGHPHRRTVSKIIKDFNLPCSSFQ 497
Query: 3246 LEFCHACQLGKLKSISFPLTVSKTTAPFQLIYSDVWGPSSTIIGAGYK 3389
C AC LGKL +S K+T PFQ+I+SD WGP+ + G G++
Sbjct: 498 FNPCSACNLGKLSRLSLASVEHKSTGPFQIIHSDFWGPAPVMSGLGHR 545
Score = 93.2 bits (230), Expect = 2e-15
Identities = 41/73 (56%), Positives = 56/73 (76%)
Frame = +3
Query: 4425 DGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAF 4604
+G ++R+KARLVAKGF Q PGIDY +TFSPVV+ TI+ + SLA + W I+ +D++NAF
Sbjct: 548 NGDIERYKARLVAKGFSQQPGIDYNETFSPVVKATTIRTILSLATVRKWPIRQLDISNAF 607
Query: 4605 LYGDFQEDVYMSQ 4643
L+G ED+YM Q
Sbjct: 608 LHGYLDEDIYMDQ 620
>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 539
Score = 432 bits (1112), Expect = e-133
Identities = 220/452 (48%), Positives = 307/452 (67%), Gaps = 4/452 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
D+ KARLVAKGF Q+ G D+ +TFSPV+KPITIR++ +LA+T W++ +D+NNAFL G
Sbjct: 83 DKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGT 142
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E +YM QP G+ K + VCKL KA+YGLKQAP+ W +KLKL L GF S+ D
Sbjct: 143 LEETIYMVQPPGFEAGDK-SLVCKLNKALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPS 201
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LF + Q T L+ QI + + + FSLK G + YFLG++V +
Sbjct: 202 LFQYQHQTHTIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHL 261
Query: 541 P-AGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQ 717
P ++L QSKYI DLL KTN+ + +P N KL + F +PT +RS +GALQ
Sbjct: 262 PDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQ 321
Query: 718 YLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSP---RLNLE 888
Y TLTRP+IS+ VNK+ QF+ P SHW A +R+L+YLKG++++G+ QP+ ++L
Sbjct: 322 YATLTRPEISFAVNKVCQFMATPLDSHWVAVKRILKYLKGTLSYGLHMQPAAVNGPISLT 381
Query: 889 SFADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVW 1068
+F D WAS +DDR+STSG +F GPNLI+W S+KQ V+ARSSTE EYRS+A A+AEL W
Sbjct: 382 AFCDADWASDIDDRRSTSGSAIFFGPNLISWWSRKQRVIARSSTEAEYRSIAQASAELTW 441
Query: 1069 IKSFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVR 1248
I++ EL + +++ CDN SA+++A NPVFH++TKH+E+DV F+R+KV SK++ V
Sbjct: 442 IQALLQELKVPFSTPTLL-CDNQSAVAIAHNPVFHSKTKHMEIDVFFVRDKVLSKQLLVY 500
Query: 1249 FLPSEEQLADVLTKPIVAARFQNLCFKLSLQS 1344
+P+ +Q AD+LTKP+ AARF+ L KL +QS
Sbjct: 501 HIPALDQWADLLTKPLSAARFEVLWDKLKVQS 532
Score = 157 bits (396), Expect = 1e-36
Identities = 75/151 (49%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Frame = +3
Query: 4194 MVTRSKLGVFKPKVY-NVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLVPFQ 4370
M TRSK G P+++ ++ + EPK+V AL + W +AM +++AL+ NHTWDLV
Sbjct: 1 MQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLP 60
Query: 4371 PHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVFS 4550
K V KWVFRVK N DGS+D+ KARLVAKGF Q+ G D+ +TFSPV++ ITI+++ +
Sbjct: 61 SDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILT 120
Query: 4551 LAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
LA+T W++ +DVNNAFL G +E +YM Q
Sbjct: 121 LALTNNWNLFQLDVNNAFLNGTLEETIYMVQ 151
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 452 bits (1164), Expect = e-131
Identities = 218/449 (48%), Positives = 309/449 (68%), Gaps = 2/449 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR+KARLVAKGF+Q GIDY DTFSPVVK TIR+V SLAV+RGWS++ +D+ NAFL+G
Sbjct: 943 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGV 1002
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+VYM QP GY S PN VCKL KA+YGLKQAP++W +L L LGF S++D+
Sbjct: 1003 LEEEVYMKQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTS 1062
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LFF + P + ++ + F+LK G + YFLG++VH
Sbjct: 1063 LFFYKKGQVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKV 1122
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLF--ENPTLYRSTIGAL 714
G++L+Q KY DLL++ M C P +TP ++KL + + +L ++ T YRS +GAL
Sbjct: 1123 KDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGAL 1182
Query: 715 QYLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESF 894
QYLTLTRPDIS+ +NK+ QFL APTT+HW A +R+LRY+K ++ G+ F +P L + F
Sbjct: 1183 QYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGF 1242
Query: 895 ADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIK 1074
+D WA S DDR+ST G+ VFLGPNL++WS++KQ+ V+RSS E EY++LA+ATAE++W++
Sbjct: 1243 SDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQ 1302
Query: 1075 SFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFL 1254
+ ELG+ + +WCDN+ A L++NP+FHARTKHIEVD HF+RE+VA K +E+ ++
Sbjct: 1303 TLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYI 1362
Query: 1255 PSEEQLADVLTKPIVAARFQNLCFKLSLQ 1341
+++Q+AD TK I + + L+L+
Sbjct: 1363 STKDQVADGFTKAIPVRQMEMFKNNLNLE 1391
Score = 146 bits (368), Expect(4) = 6e-75
Identities = 81/232 (34%), Positives = 125/232 (53%), Gaps = 2/232 (0%)
Frame = +3
Query: 2886 KYILCVPDITKNLLSISQFTKDNKVFIEFHHDSCFVKDKLTHQTLLKGSLKGGLNQLDLS 3065
K IL VP KNL+S + DN F+E H + +KD+ T T+LKG + L L S
Sbjct: 345 KNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNTILKGRCRRRLYSLPTS 404
Query: 3066 PLRSSYNSARLPXXXXXXXXXXXXXAHCDVNLWHKRLGHCSTVVLTNTLKQINVPHSS-- 3239
P + + +A P + WH RLGH + ++T L + N+P S+
Sbjct: 405 PAKQVH-AATTP----------------SFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVA 447
Query: 3240 SKLEFCHACQLGKLKSISFPLTVSKTTAPFQLIYSDVWGPSSTIIGAGYKYYTHFVDDFT 3419
+K C ACQ GK + +P + S ++ P +LI+S+VWGP+ +G G K+Y F+DD++
Sbjct: 448 NKDSICDACQKGKSHQLPYPKSSSVSSQPLELIFSNVWGPAPISVG-GKKFYVSFIDDYS 506
Query: 3420 NYTGIYPLQTKGEAITALKHFKSVVETQFLSHIQAFQCDWGGEFRPIATFLS 3575
+T +Y L+ K E + F+++VE F I A Q DWGGE++ + TF +
Sbjct: 507 KFTWVYLLKHKSEVFQKFQEFQTLVERFFGHKILAVQTDWGGEYQKLNTFFA 558
Score = 81.3 bits (199), Expect(4) = 6e-75
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +3
Query: 3765 PDYHFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYRCLS-PSGRIYVTRTV 3938
P+Y L+ FGCA +P LRP+N+ KL FRS +C FLGYS HKG++CL +GR+YV+R V
Sbjct: 636 PNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVFLGYSNLHKGFKCLEIATGRVYVSRDV 695
Query: 3939 SFNEMEFPY 3965
+F+E FP+
Sbjct: 696 TFDESIFPF 704
Score = 71.2 bits (173), Expect(4) = 6e-75
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +1
Query: 3568 SCPYTHSQNGKPERKHQHIVNVGLSFLAHSNLPYSFW*DAFVVVVFRINRLPTPTLNNIF 3747
SCPY H QNG ERKH+H++ V L+ LAH+++P FW +A + + INR P+ +N
Sbjct: 567 SCPYAHQQNGSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPSKVINFAC 626
Query: 3748 P 3750
P
Sbjct: 627 P 627
Score = 56.6 bits (135), Expect(4) = 6e-75
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +1
Query: 2635 YQPTPQHASPASVFSDYSLTGADPHWYMDSGASAHVTADLKNLSLQNAYTGNEKLTIGNG 2814
Y P + A+ A+ + G D +WY+D+GA+ H+T +L L ++ Y G +K+ +G
Sbjct: 269 YVPDERSAAAAAAY------GIDTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASG 322
Query: 2815 SKLGITHIGSSLISHPS 2865
+ + I HIG S+I P+
Sbjct: 323 AGMEIKHIGDSVIHTPT 339
Score = 158 bits (400), Expect = 2e-35
Identities = 75/126 (59%), Positives = 99/126 (78%)
Frame = +3
Query: 4266 KSVDDALLNSEWKAAMDAKFSALIKNHTWDLVPFQPHMKVVDHKWVFRVKYNPDGSVDRF 4445
KS+++A+ N WK AMDA++ ALI+N TW LVP Q V+D KWV++VK DGS+DR+
Sbjct: 886 KSLEEAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRY 945
Query: 4446 KARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGDFQE 4625
KARLVAKGF+Q GIDY DTFSPVV+ TI++V SLAV++GWS++ +DV NAFL+G +E
Sbjct: 946 KARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEE 1005
Query: 4626 DVYMSQ 4643
+VYM Q
Sbjct: 1006 EVYMKQ 1011
>ref|YP_514636.1| hypothetical protein OrsaiPp07 (mitochondrion) [Oryza sativa Indica
Group] gi|289065044|ref|YP_003433855.1| hypothetical
protein OrrupM_p18 (mitochondrion) [Oryza rufipogon]
gi|74100111|gb|AAZ99275.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|74100166|gb|AAZ99329.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|74100220|gb|AAZ99382.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026126|dbj|BAI67959.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|285026155|dbj|BAI67987.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685219|gb|AER12982.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685288|gb|AER13050.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277649|gb|AEZ03755.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277659|gb|AEZ03764.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540457|dbj|BAN67511.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540460|dbj|BAN67513.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 490
Score = 425 bits (1092), Expect = e-131
Identities = 215/431 (49%), Positives = 293/431 (67%), Gaps = 2/431 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR+KARLVAKGF+Q GIDY +TFSPVVK TIRL+ SLAV+ GWS++ +D+ NAFL+G
Sbjct: 43 DRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGV 102
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+EDVYM QP GY D SK + VCKL KA+YGLKQAP++W +L + L +LGF S++D+
Sbjct: 103 LEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADAS 162
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LFF + K + ++ ++ F+LK G + YFLG++V+
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKV 222
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLF--ENPTLYRSTIGAL 714
GI+L Q KY DLLK+ M C TP KL ++ E+ T YRS +GAL
Sbjct: 223 HDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGAL 282
Query: 715 QYLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESF 894
QYLTLTRPDI++ VNK+ Q+L APT+ HW A +R+LRYLKGS+ G+ S + +F
Sbjct: 283 QYLTLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAF 342
Query: 895 ADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIK 1074
+D WA DDRKST G+ VFLG NLI+W++ KQ+ V+RSSTE EY++LA+ATAE++ ++
Sbjct: 343 SDADWAGCPDDRKSTGGFAVFLGANLISWNAWKQATVSRSSTEAEYKALANATAEIISVQ 402
Query: 1075 SFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFL 1254
+ E GI+ + +WCDNI A SL++NPVFHARTKHIEVD HF+RE+V+ +++RF+
Sbjct: 403 TLLKERGIAQPRAACLWCDNIGATSLSANPVFHARTKHIEVDYHFVRERVSQGLLDIRFV 462
Query: 1255 PSEEQLADVLT 1287
PS +Q+AD T
Sbjct: 463 PSGDQVADGFT 473
Score = 137 bits (344), Expect = 3e-30
Identities = 62/111 (55%), Positives = 86/111 (77%)
Frame = +3
Query: 4311 MDAKFSALIKNHTWDLVPFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGI 4490
MD ++ AL++N+TW LVP ++D KWV+++K DG++DR+KARLVAKGF+Q GI
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 4491 DYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
DY +TFSPVV+ TI+L+ SLAV+ GWS++ +DV NAFL+G +EDVYM Q
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQ 111
>gb|AMA06715.1| hypothetical protein (mitochondrion) [Oryza minuta]
Length = 490
Score = 423 bits (1088), Expect = e-130
Identities = 213/431 (49%), Positives = 292/431 (67%), Gaps = 2/431 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR+KARLVAKGF+Q GIDY +TFSPVVK TIRL+ SLAV+ GWS++ +D+ NAFL+G
Sbjct: 43 DRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGV 102
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+EDVYM QP GY D SK + VCKL KA+YGLKQAP++W +L + L +LGF S++D+
Sbjct: 103 LEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADAS 162
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LFF + K + ++ ++ F+LK G + YFLG++V+
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKV 222
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLF--ENPTLYRSTIGAL 714
GI+L Q KY DLLK+ M C TP K ++ E+ T YRS +GAL
Sbjct: 223 HDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKFLAKEGEPLGAEDSTRYRSIVGAL 282
Query: 715 QYLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESF 894
QYLTLTRPDI++ VNK+ Q+L APT+ HW A +R+LRYLKGS+ G+ S + +F
Sbjct: 283 QYLTLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAF 342
Query: 895 ADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIK 1074
+D WA DDRK T G+ VFLG NLI+W+++KQ+ V+RSSTE EY++LA+ATAE++ ++
Sbjct: 343 SDADWAGCPDDRKPTGGFAVFLGANLISWNARKQATVSRSSTEAEYKALANATAEIISVQ 402
Query: 1075 SFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFL 1254
+ E GI+ + +WCDNI A SL++NPVFHARTKHIEVD HF+RE+V+ +++RF+
Sbjct: 403 TLLKERGIAQPRAACLWCDNIGATSLSANPVFHARTKHIEVDYHFVRERVSQGLLDIRFV 462
Query: 1255 PSEEQLADVLT 1287
PS +Q+AD T
Sbjct: 463 PSGDQVADGFT 473
Score = 137 bits (344), Expect = 3e-30
Identities = 62/111 (55%), Positives = 86/111 (77%)
Frame = +3
Query: 4311 MDAKFSALIKNHTWDLVPFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGI 4490
MD ++ AL++N+TW LVP ++D KWV+++K DG++DR+KARLVAKGF+Q GI
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 4491 DYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
DY +TFSPVV+ TI+L+ SLAV+ GWS++ +DV NAFL+G +EDVYM Q
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQ 111
>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 450 bits (1158), Expect = e-130
Identities = 223/450 (49%), Positives = 313/450 (69%), Gaps = 4/450 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
++FKARLVAKGF Q G D+ +TFSPV+KPITIR++ +LAVT WS+Q ID+NNAFL G
Sbjct: 970 NKFKARLVAKGFLQTAGFDFTETFSPVIKPITIRIILTLAVTFKWSVQQIDVNNAFLNGI 1029
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+VYM+QP G+ S K + VCKL K++YGLKQAP++W D+L LL LGF S+ D
Sbjct: 1030 LQEEVYMTQPAGFEASDK-SLVCKLHKSLYGLKQAPRAWYDRLTQALLQLGFVKSKCDPS 1088
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
L T P L++ +I + F+LK G++ YFLG++VH+
Sbjct: 1089 LLIHTQNGACTYVLIYVDDILITGSAPHLISDLIHKLNMKFALKQLGQIDYFLGIEVHHL 1148
Query: 541 PAG-ILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQ 717
P+G +LLNQ+KYI DLL K +ME P +P + +L S +PTLYRS +GALQ
Sbjct: 1149 PSGALLLNQTKYIRDLLCKAHMEDSAPIGSPMVSSCRLSKYGSDTMTDPTLYRSIVGALQ 1208
Query: 718 YLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPR---LNLE 888
Y TLTRPDI++ VNK+ QF+ P SHW A +R+LRYL G+++HG+L PSP +L
Sbjct: 1209 YATLTRPDIAFSVNKVCQFMAHPLESHWKAVKRILRYLNGTLSHGLLLTPSPTSPPFSLR 1268
Query: 889 SFADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVW 1068
+++D WA+ DDR+STSG C++ GPNLI+W SKKQ +VARSSTE EYRS+A+ TA+L+W
Sbjct: 1269 AYSDADWATDQDDRRSTSGSCIYFGPNLISWGSKKQQLVARSSTEAEYRSMANTTADLLW 1328
Query: 1069 IKSFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVR 1248
I+S EL + L +++ CDN+SA+SL+ NP+ H++TKHIE+D+HF+REKV SK++ +
Sbjct: 1329 IQSLLRELQVPFLTPTLL-CDNLSAVSLSHNPILHSKTKHIELDIHFVREKVLSKQLNIL 1387
Query: 1249 FLPSEEQLADVLTKPIVAARFQNLCFKLSL 1338
+P+++QLAD LTKP+ ++ + KL +
Sbjct: 1388 HVPAQDQLADPLTKPLSPSQHTAIRTKLKV 1417
Score = 218 bits (556), Expect(3) = 7e-79
Identities = 135/400 (33%), Positives = 201/400 (50%), Gaps = 40/400 (10%)
Frame = +3
Query: 2886 KYILCVPDITKNLLSISQFTKDNKVFIEFHHDSCFVKDKLTHQTLLKGSLKG-GLNQLD- 3059
K +L VP+I+KNLLS+S+F +DN V EFH CFVK + + Q LL+G++ GL Q
Sbjct: 391 KDLLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCFVKYQDSKQVLLEGTVGADGLYQFKP 450
Query: 3060 ---LSPLRSSYNSARLPXXXXXXXXXXXXXAHCD-----------VNLWHKRLGHCSTVV 3197
L+ ++ NS +C+ +WH RLGH T
Sbjct: 451 FKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNNTVSVMQNGNVFQMWHLRLGHAHTSA 510
Query: 3198 LTNTLKQINVPHSSSKLEF-CHACQLGKLKSISFPLTVSKTTAPFQLIYSDVWGPSSTII 3374
+ N L N+P S+ C C +GK + PL+ + T PF++I+ D+WGP+ +
Sbjct: 511 VKNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVS 570
Query: 3375 GAGYKYYTHFVDDFTNYTGIYPLQTKGEAITALKHFKSVVETQFLSHIQAFQCDWGGEFR 3554
GY YY FVD +T +T IY L+ K +A+ A FK++++ QF + I+A Q DWGGEFR
Sbjct: 571 YYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGEFR 630
Query: 3555 PIATFLSLYSFXXXXXXXXXSTYC*CWLVFSGPLQSSLLILVR----CVCGCCLQNK*AS 3722
L+ S +G ++ +V + L K
Sbjct: 631 AFTALLNELGIQHRLTCPHTSHQ-------NGTVERKHRHIVEMGLTLLSHAALPLKFWD 683
Query: 3723 YPYTQ------------------QYLSFYGSAPDYHFLKSFGCACYPYLRPFNQSKLQFR 3848
+ +TQ Y + + S PDY +K FGC C+P+LRP+N KLQ+R
Sbjct: 684 HSFTQAVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHKLQYR 743
Query: 3849 STKC-FLGYSLAHKGYRCLSPSGRIYVTRTVSFNEMEFPY 3965
S+ C +LG S HKG++CL +GRIY+++ V F+E +FPY
Sbjct: 744 SSPCVYLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPY 783
Score = 75.5 bits (184), Expect(3) = 7e-79
Identities = 65/276 (23%), Positives = 111/276 (40%), Gaps = 17/276 (6%)
Frame = +1
Query: 2089 SDYFLHMQGLADNIQVAGMVIH-------ILNGLGMEYESIVVNLNARVEDLTLQDVQYA 2247
++Y L ++ + +++ G ++ IL GL E+ S V+ + +R + T++DV+
Sbjct: 123 NEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVEDVEAL 182
Query: 2248 LQTHEMRIQQLSQHSPTDSVHIQNVPAAHLANNRS----------FPTDNSGHRGGMTXX 2397
L E + ++ Q + SV + AH N S T++
Sbjct: 183 LLLQEAQFEKFKQELTSPSV---SANVAHTETNASDSNSEHESQELGTEHYNVNANRGRG 239
Query: 2398 XXXXXXXXXXXXXXXXXXXXSCQICGKNNHIASKCFKRFDVNFTGVDLSSAQAHFLSTTH 2577
CQIC K NH A C+ R+D + +
Sbjct: 240 RGKGRGRGRGKGQAQNQGKVKCQICAKPNHDAINCWYRYDPQAMNQNSRGG--------Y 291
Query: 2578 ELPKSPSSGSFIPMANHLQYQPTPQHASPASVFSDYSLTGADPHWYMDSGASAHVTADLK 2757
++ S +F P + PQ + ++ D GA WY DSGAS H+T +
Sbjct: 292 QVGPSNRPQNFNPYMRPTAHLAMPQPYAMPNM--DQFSNGA---WYPDSGASHHLTYNPN 346
Query: 2758 NLSLQNAYTGNEKLTIGNGSKLGITHIGSSLISHPS 2865
NLS + YTG +++ +GNG + I +G S P+
Sbjct: 347 NLSYSSPYTGQDQVVMGNGQGVSIHSLGQSQFHSPN 382
Score = 53.5 bits (127), Expect(3) = 7e-79
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +2
Query: 1742 IPLRLTRDNYHYWCLQILSTVKAHGFEDFLFGTVQIPPKLID------GEINQEYMLWLR 1903
+ ++L N+ W Q+ + AH F+ QIP + G + EY WL
Sbjct: 1 LTIKLDEKNFLLWSQQVNGVITAHNLHRFVVNP-QIPLQFASIEDCALGINSDEYQQWLI 59
Query: 1904 RDQLLFSWIIASLSESMMGYITRCNTSSDLWSILETVFRS 2023
+DQ LF+W++++LS+ ++ + C + ++W + F S
Sbjct: 60 KDQTLFTWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNS 99
Score = 175 bits (443), Expect = 2e-40
Identities = 85/154 (55%), Positives = 110/154 (71%)
Frame = +3
Query: 4182 STHSMVTRSKLGVFKPKVYNVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLV 4361
+ H M+TR+K G KPKV+ LEPKSV AL + W AM A++ AL+ N TW LV
Sbjct: 888 NAHPMITRAKTGNLKPKVFVAA---LEPKSVKSALNDPAWLQAMQAEYKALMDNQTWTLV 944
Query: 4362 PFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKL 4541
P H K + KW+FRVK NPDG+V++FKARLVAKGF Q G D+ +TFSPV++ ITI++
Sbjct: 945 PLPQHRKAIGCKWIFRVKENPDGTVNKFKARLVAKGFLQTAGFDFTETFSPVIKPITIRI 1004
Query: 4542 VFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
+ +LAVT WS+Q +DVNNAFL G QE+VYM+Q
Sbjct: 1005 ILTLAVTFKWSVQQIDVNNAFLNGILQEEVYMTQ 1038
>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 450 bits (1158), Expect = e-130
Identities = 223/450 (49%), Positives = 313/450 (69%), Gaps = 4/450 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
++FKARLVAKGF Q G D+ +TFSPV+KPITIR++ +LAVT WS+Q ID+NNAFL G
Sbjct: 970 NKFKARLVAKGFLQTAGFDFTETFSPVIKPITIRIILTLAVTFKWSVQQIDVNNAFLNGI 1029
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+VYM+QP G+ S K + VCKL K++YGLKQAP++W D+L LL LGF S+ D
Sbjct: 1030 LQEEVYMTQPAGFEASDK-SLVCKLHKSLYGLKQAPRAWYDRLTQALLQLGFVKSKCDPS 1088
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
L T P L++ +I + F+LK G++ YFLG++VH+
Sbjct: 1089 LLIHTQNGACTYVLIYVDDILITGSAPHLISDLIHKLNMKFALKQLGQIDYFLGIEVHHL 1148
Query: 541 PAG-ILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQ 717
P+G +LLNQ+KYI DLL K +ME P +P + +L S +PTLYRS +GALQ
Sbjct: 1149 PSGALLLNQTKYIRDLLCKAHMEDSAPIGSPMVSSCRLSKYGSDTMTDPTLYRSIVGALQ 1208
Query: 718 YLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPR---LNLE 888
Y TLTRPDI++ VNK+ QF+ P SHW A +R+LRYL G+++HG+L PSP +L
Sbjct: 1209 YATLTRPDIAFSVNKVCQFMAHPLESHWKAVKRILRYLNGTLSHGLLLTPSPTSPPFSLR 1268
Query: 889 SFADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVW 1068
+++D WA+ DDR+STSG C++ GPNLI+W SKKQ +VARSSTE EYRS+A+ TA+L+W
Sbjct: 1269 AYSDADWATDQDDRRSTSGSCIYFGPNLISWGSKKQQLVARSSTEAEYRSMANTTADLLW 1328
Query: 1069 IKSFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVR 1248
I+S EL + L +++ CDN+SA+SL+ NP+ H++TKHIE+D+HF+REKV SK++ +
Sbjct: 1329 IQSLLRELQVPFLTPTLL-CDNLSAVSLSHNPILHSKTKHIELDIHFVREKVLSKQLNIL 1387
Query: 1249 FLPSEEQLADVLTKPIVAARFQNLCFKLSL 1338
+P+++QLAD LTKP+ ++ + KL +
Sbjct: 1388 HVPAQDQLADPLTKPLSPSQHTAIRTKLKV 1417
Score = 216 bits (550), Expect(3) = 4e-78
Identities = 134/400 (33%), Positives = 201/400 (50%), Gaps = 40/400 (10%)
Frame = +3
Query: 2886 KYILCVPDITKNLLSISQFTKDNKVFIEFHHDSCFVKDKLTHQTLLKGSLKG-GLNQLD- 3059
K +L VP+I+KNLLS+S+F +DN V EFH CFVK + + Q LL+G++ GL Q
Sbjct: 391 KDLLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCFVKYQDSKQVLLEGTVGADGLYQFKP 450
Query: 3060 ---LSPLRSSYNSARLPXXXXXXXXXXXXXAHCD-----------VNLWHKRLGHCSTVV 3197
L+ ++ NS +C+ +WH RLGH T
Sbjct: 451 FKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNNTVSVMQNGNVFQMWHLRLGHAHTSA 510
Query: 3198 LTNTLKQINVPHSSSKLEF-CHACQLGKLKSISFPLTVSKTTAPFQLIYSDVWGPSSTII 3374
+ N L N+P S+ C C +GK + PL+ + T PF++I+ D+WGP+ +
Sbjct: 511 VKNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVS 570
Query: 3375 GAGYKYYTHFVDDFTNYTGIYPLQTKGEAITALKHFKSVVETQFLSHIQAFQCDWGGEFR 3554
GY YY FVD +T +T IY L+ K +A+ A FK++++ QF + I+A Q DWGGEFR
Sbjct: 571 YYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGEFR 630
Query: 3555 PIATFLSLYSFXXXXXXXXXSTYC*CWLVFSGPLQSSLLILVR----CVCGCCLQNK*AS 3722
L+ S +G ++ +V + L K
Sbjct: 631 AFTALLNELGIQHRLTCPHTSHQ-------NGTVERKHRHIVEMGLTLLSHADLPLKFWD 683
Query: 3723 YPYTQ------------------QYLSFYGSAPDYHFLKSFGCACYPYLRPFNQSKLQFR 3848
+ +TQ Y + + S PDY +K FGC C+P+LRP+N KLQ++
Sbjct: 684 HSFTQAVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHKLQYK 743
Query: 3849 STKC-FLGYSLAHKGYRCLSPSGRIYVTRTVSFNEMEFPY 3965
S+ C +LG S HKG++CL +GRIY+++ V F+E +FPY
Sbjct: 744 SSPCVYLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPY 783
Score = 75.5 bits (184), Expect(3) = 4e-78
Identities = 65/276 (23%), Positives = 111/276 (40%), Gaps = 17/276 (6%)
Frame = +1
Query: 2089 SDYFLHMQGLADNIQVAGMVIH-------ILNGLGMEYESIVVNLNARVEDLTLQDVQYA 2247
++Y L ++ + +++ G ++ IL GL E+ S V+ + +R + T++DV+
Sbjct: 123 NEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVEDVEAL 182
Query: 2248 LQTHEMRIQQLSQHSPTDSVHIQNVPAAHLANNRS----------FPTDNSGHRGGMTXX 2397
L E + ++ Q + SV + AH N S T++
Sbjct: 183 LLLQEAQFEKFKQELTSPSV---SANVAHTETNASDSNSEHESQELGTEHYNVNANRGRG 239
Query: 2398 XXXXXXXXXXXXXXXXXXXXSCQICGKNNHIASKCFKRFDVNFTGVDLSSAQAHFLSTTH 2577
CQIC K NH A C+ R+D + +
Sbjct: 240 RGKGRGRGRGKGQAQNQGKVKCQICAKPNHDAINCWYRYDPQAMNQNSRGG--------Y 291
Query: 2578 ELPKSPSSGSFIPMANHLQYQPTPQHASPASVFSDYSLTGADPHWYMDSGASAHVTADLK 2757
++ S +F P + PQ + ++ D GA WY DSGAS H+T +
Sbjct: 292 QVGPSNRPQNFNPYMRPTAHLAMPQPYAMPNM--DQFSNGA---WYPDSGASHHLTYNPN 346
Query: 2758 NLSLQNAYTGNEKLTIGNGSKLGITHIGSSLISHPS 2865
NLS + YTG +++ +GNG + I +G S P+
Sbjct: 347 NLSYSSPYTGQDQVVMGNGQGVSIHSLGQSQFHSPN 382
Score = 53.5 bits (127), Expect(3) = 4e-78
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +2
Query: 1742 IPLRLTRDNYHYWCLQILSTVKAHGFEDFLFGTVQIPPKLID------GEINQEYMLWLR 1903
+ ++L N+ W Q+ + AH F+ QIP + G + EY WL
Sbjct: 1 LTIKLDEKNFLLWSQQVNGVITAHNLHRFVVNP-QIPLQFASIEDCALGINSDEYQQWLI 59
Query: 1904 RDQLLFSWIIASLSESMMGYITRCNTSSDLWSILETVFRS 2023
+DQ LF+W++++LS+ ++ + C + ++W + F S
Sbjct: 60 KDQTLFTWLLSTLSDGVLPRVLSCRHAHEVWDKIHKYFNS 99
Score = 175 bits (443), Expect = 2e-40
Identities = 85/154 (55%), Positives = 110/154 (71%)
Frame = +3
Query: 4182 STHSMVTRSKLGVFKPKVYNVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLV 4361
+ H M+TR+K G KPKV+ LEPKSV AL + W AM A++ AL+ N TW LV
Sbjct: 888 NAHPMITRAKTGNLKPKVFVAA---LEPKSVKSALNDPAWLQAMQAEYKALMDNQTWTLV 944
Query: 4362 PFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKL 4541
P H K + KW+FRVK NPDG+V++FKARLVAKGF Q G D+ +TFSPV++ ITI++
Sbjct: 945 PLPQHRKAIGCKWIFRVKENPDGTVNKFKARLVAKGFLQTAGFDFTETFSPVIKPITIRI 1004
Query: 4542 VFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
+ +LAVT WS+Q +DVNNAFL G QE+VYM+Q
Sbjct: 1005 ILTLAVTFKWSVQQIDVNNAFLNGILQEEVYMTQ 1038
>ref|YP_002000554.1| orf490 (mitochondrion) [Oryza sativa Japonica Group]
gi|23495377|dbj|BAC19858.1| orf490 (mitochondrion) [Oryza
sativa Japonica Group]
Length = 490
Score = 422 bits (1084), Expect = e-130
Identities = 213/431 (49%), Positives = 292/431 (67%), Gaps = 2/431 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR+KARLVAKGF+Q GIDY +TFSPVVK TIRL+ SLAV+ GWS++ +D+ NAFL+G
Sbjct: 43 DRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGV 102
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+EDVYM QP GY D SK + VCKL KA+YGL+ AP++W +L + L +LGF S++D+
Sbjct: 103 LEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLRHAPRAWFSRLSMKLQNLGFQPSKADAS 162
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LFF + K + ++ ++ F+LK G + YFLG++V+
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKV 222
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLF--ENPTLYRSTIGAL 714
GI+L Q KY DLLK+ M C TP KL ++ E+ T YRS +GAL
Sbjct: 223 HDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGAL 282
Query: 715 QYLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESF 894
QYLTLTRPDI++ VNK+ Q+L APT+ HW A +R+LRYLKGS+ G+ S + +F
Sbjct: 283 QYLTLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAF 342
Query: 895 ADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIK 1074
+D WA DDRKST G+ VFLG NLI+W++ KQ+ V+RSSTE EY++LA+ATAE++ ++
Sbjct: 343 SDADWAGCPDDRKSTGGFAVFLGANLISWNAWKQATVSRSSTEAEYKALANATAEIISVQ 402
Query: 1075 SFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFL 1254
+ E GI+ + +WCDNI A SL++NPVFHARTKHIEVD HF+RE+V+ +++RF+
Sbjct: 403 TLLKERGIAQPRAACLWCDNIGATSLSANPVFHARTKHIEVDYHFVRERVSQGLLDIRFV 462
Query: 1255 PSEEQLADVLT 1287
PS +Q+AD T
Sbjct: 463 PSGDQVADGFT 473
Score = 137 bits (344), Expect = 3e-30
Identities = 62/111 (55%), Positives = 86/111 (77%)
Frame = +3
Query: 4311 MDAKFSALIKNHTWDLVPFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGI 4490
MD ++ AL++N+TW LVP ++D KWV+++K DG++DR+KARLVAKGF+Q GI
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 4491 DYFDTFSPVVEHITIKLVFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
DY +TFSPVV+ TI+L+ SLAV+ GWS++ +DV NAFL+G +EDVYM Q
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQ 111
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 446 bits (1146), Expect = e-129
Identities = 221/448 (49%), Positives = 303/448 (67%), Gaps = 2/448 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
DR+KARLVAKG++Q GIDY DTFSPVVK TIR++ S+AV+RGWS+ +D+ NAFL+G
Sbjct: 863 DRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGV 922
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L+E+VYM QP GY DS+K N VCKL KA+YGLKQAP++W +L LLSLGF S++D+
Sbjct: 923 LEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTS 982
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQVHYS 540
LFF + K ++ + F+LK G ++YFLG++V+
Sbjct: 983 LFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKV 1042
Query: 541 PAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLF--ENPTLYRSTIGAL 714
GI+L Q KY DLLKK M C P +TP ++KL I + S ++ T YRS +GAL
Sbjct: 1043 RDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGAL 1102
Query: 715 QYLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPSPRLNLESF 894
QYLTLTRPDI++ VNK+ QFL APTT HW A +R+LRY+K G+ S + +F
Sbjct: 1103 QYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAF 1162
Query: 895 ADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVWIK 1074
+D WA SVDDRKST G+ VFLG NL++WS++KQ V+RSSTE EY++LA+ATAEL+W++
Sbjct: 1163 SDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWVQ 1222
Query: 1075 SFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVRFL 1254
E+ I + +WCDN+ A L++NP+FHARTKHIEVD HF+R++VA K +++ ++
Sbjct: 1223 ILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLLDIEYV 1282
Query: 1255 PSEEQLADVLTKPIVAARFQNLCFKLSL 1338
P+ +Q+AD TKP+ +N L+L
Sbjct: 1283 PTGDQVADGFTKPLSVRLLENFKVNLNL 1310
Score = 88.6 bits (218), Expect(3) = 3e-36
Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +3
Query: 3765 PDYHFLKSFGCACYPYLRPFNQSKLQFRSTKC-FLGYSLAHKGYRCLSPS-GRIYVTRTV 3938
PDY L+ FGC C+P LRP+N KLQFRS +C FLGYS HKG++CL S GR+YV+R V
Sbjct: 521 PDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVSTGRVYVSRDV 580
Query: 3939 SFNEMEFPY 3965
+F+E FP+
Sbjct: 581 TFDENFFPF 589
Score = 78.6 bits (192), Expect(3) = 3e-36
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1
Query: 3562 LHSCPYTHSQNGKPERKHQHIVNVGLSFLAHSNLPYSFW*DAFVVVVFRINRLPTPTLN 3738
L SCP+ H QNG ERKH+HIV VGLS LAH+++P FW +AF+ + INR PT LN
Sbjct: 450 LVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILN 508
Score = 37.4 bits (85), Expect(3) = 3e-36
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 3444 QTKGEAITALKHFKSVVETQFLSHIQAFQCDWGGEFRPIATFLS 3575
Q K E F+S+VE F I A Q DWGGE++ + TF +
Sbjct: 400 QYKSEVFQKFHEFQSLVERLFDRKILAVQTDWGGEYQRLNTFFN 443
Score = 159 bits (402), Expect = 1e-35
Identities = 79/155 (50%), Positives = 110/155 (70%), Gaps = 7/155 (4%)
Frame = +3
Query: 4200 TRSKLGVFKPKVYN-------VIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDL 4358
TR + GV KPKVY ++ EP +++AL + WK AMD ++SAL+KN TW L
Sbjct: 777 TRLQQGVRKPKVYTDGTIRYGCFTSSGEPYDLNEALGDVNWKDAMDIEYSALMKNKTWHL 836
Query: 4359 VPFQPHMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIK 4538
VP + V+ KWV+++K DGS+DR+KARLVAKG++Q GIDY DTFSPVV+H TI+
Sbjct: 837 VPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIR 896
Query: 4539 LVFSLAVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
++ S+AV++GWS+ +DV NAFL+G +E+VYM Q
Sbjct: 897 IILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQ 931
>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 539
Score = 422 bits (1085), Expect = e-129
Identities = 215/454 (47%), Positives = 299/454 (65%), Gaps = 4/454 (0%)
Frame = +1
Query: 1 DRFKARLVAKGFQQLPGIDYFDTFSPVVKPITIRLVFSLAVTRGWSIQHIDINNAFLYGD 180
+R+KARLVAKGF Q PG D+ +TFSP++KP+TIRL+ +LA++ W I +D+NNAFL G
Sbjct: 82 NRYKARLVAKGFLQQPGFDFNETFSPIIKPVTIRLILTLAISNHWDIHQLDVNNAFLNGS 141
Query: 181 LKEDVYMSQPTGYVDSSKPNNVCKLVKAIYGLKQAPKSWNDKLKLHLLSLGFTTSQSDSC 360
L E VYM QP G+ + VCKL KA+YGLKQAP+ W ++L+ LL GF S+ D
Sbjct: 142 LNETVYMQQPPGF-EVPDSTLVCKLNKALYGLKQAPRQWFERLQYTLLQFGFKASKCDPS 200
Query: 361 LFFQRVQNQXXXXXXXXXXXXXTRDDPKLVAQIIDGIQTAFSLKHFGKVSYFLGLQV-HY 537
LF +Q+ T + + Q+ID + + FSLK GK+ YFLG++V H
Sbjct: 201 LFTYHMQSNIVYLLVYVDDIIITGNSFQFTQQLIDQLNSIFSLKQLGKLDYFLGIEVRHL 260
Query: 538 SPAGILLNQSKYILDLLKKTNMETCNPCATPHCLNQKLHIQDSSLFENPTLYRSTIGALQ 717
+LL QSKYI DLL++TNM N ++P + KL S + T YRS +GALQ
Sbjct: 261 QNGSVLLTQSKYIRDLLQRTNMLEANAISSPMVSSCKLSKHGSDTLADSTFYRSVVGALQ 320
Query: 718 YLTLTRPDISYIVNKLSQFLQAPTTSHWGACERVLRYLKGSITHGILFQPS---PRLNLE 888
Y T+TRP++S+ VNK+ QF+ P SHW A +R+LRYLKG++ +G+ QP+ +L
Sbjct: 321 YATITRPELSFAVNKVCQFMAHPLESHWNAVKRILRYLKGTMFYGLHLQPARVHQPFSLY 380
Query: 889 SFADVVWASSVDDRKSTSGYCVFLGPNLIAWSSKKQSVVARSSTEVEYRSLASATAELVW 1068
++ D WA+ DDR+STSG +FLGPNLI+W S+KQ VVARSSTE EYRSLA AT+E++W
Sbjct: 381 AYCDADWAADPDDRRSTSGAAIFLGPNLISWWSRKQPVVARSSTEAEYRSLAQATSEVLW 440
Query: 1069 IKSFFAELGISILPRSVIWCDNISAISLASNPVFHARTKHIEVDVHFIREKVASKEVEVR 1248
I++ EL + I+CDN S +SLA NPV H+RTKH+E+++ F+REKV + ++ V+
Sbjct: 441 IQTLLHELRVP-FSTPTIYCDNQSTVSLAHNPVLHSRTKHMEINLFFVREKVLANQLTVQ 499
Query: 1249 FLPSEEQLADVLTKPIVAARFQNLCFKLSLQSSP 1350
+P+ +Q AD LTKP+ + RF L KL + P
Sbjct: 500 HIPASDQWADALTKPLSSTRFLILRDKLKVVELP 533
Score = 165 bits (417), Expect = 3e-39
Identities = 78/150 (52%), Positives = 104/150 (69%)
Frame = +3
Query: 4194 MVTRSKLGVFKPKVYNVIHTNLEPKSVDDALLNSEWKAAMDAKFSALIKNHTWDLVPFQP 4373
M TRSK G+ KPK +V+ EPK+V AL + +W AM ++SAL+KN+TW LV P
Sbjct: 1 MQTRSKSGIHKPKYPSVLLAQSEPKNVKQALKDPKWLEAMKQEYSALLKNNTWTLVQLPP 60
Query: 4374 HMKVVDHKWVFRVKYNPDGSVDRFKARLVAKGFQQLPGIDYFDTFSPVVEHITIKLVFSL 4553
+ KWVFR+K N DGSV+R+KARLVAKGF Q PG D+ +TFSP+++ +TI+L+ +L
Sbjct: 61 DRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPIIKPVTIRLILTL 120
Query: 4554 AVTKGWSIQHVDVNNAFLYGDFQEDVYMSQ 4643
A++ W I +DVNNAFL G E VYM Q
Sbjct: 121 AISNHWDIHQLDVNNAFLNGSLNETVYMQQ 150